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Cow genome map

           
Conread name:
           
rcki31_m16.y1
        

               
Conread position:
               
1-146
               

               
Cow position:
               
chrX:7695166-7695013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chrX:27446061-27445871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chrX:35409020-35408816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chrX:32419557-32419320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chrX:4750986-4751267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 177
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chrX:40268862-40268566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
74, 107
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chrX:11855555-11855245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 283
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chrX:39702237-39701896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chrX:28156921-28156562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 192
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chrX:21255161-21254784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 176
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chrX:11073822-11074182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chrX:41304845-41305253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 181
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chrX:3464690-3465125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 222
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chrX:38151074-38150638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 284
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chrX:41791326-41791817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 183
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chrX:38852545-38852046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 178
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chrX:29942536-29942030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 196
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chrX:34761452-34760920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 284
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chrX:26531351-26530819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
1-523
               

               
Cow position:
               
chrX:41847148-41847683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:323301-322761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 285
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:671617-672146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 90
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:5248771-5248236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 324
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:5646718-5647259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 284
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:7551417-7551956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:7572767-7572236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 169
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:8641174-8640633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 284
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:10438552-10439063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:10866481-10867011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 253
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:14049808-14050348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 285
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:14801432-14801974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 285
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:15121803-15122315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:16782666-16782131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 284
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:18194076-18193535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 284
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:18950350-18950891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 284
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:19399164-19398623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 284
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:20953919-20953382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 284
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:21226863-21226326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 278
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:21582828-21582287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:21592677-21592138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 180
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:22564301-22564839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 203
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:22579003-22579537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 14
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:23038611-23039137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:24588350-24588889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 213
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:27754815-27754273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 181
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:27977445-27977986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 281
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:28879220-28879735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 72
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:30136480-30137012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:30163852-30164391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 284
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:38227925-38228465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 185
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:41156697-41156157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 284
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chrX:42222402-42222921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
1-529
               

               
Cow position:
               
chrX:23022699-23022159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 264
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chrX:17889496-17890011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 76
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chrX:25451710-25451176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 150
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chrX:40496192-40496737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
1-532
               

               
Cow position:
               
chrX:23341606-23342152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 283
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chrX:22819441-22818907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 43
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chrX:17663533-17664084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 177
               

               
Conread position:
               
2-452
               

               
Cow position:
               
chrX:47000268-47000735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
2-525
               

               
Cow position:
               
chrX:32144883-32145411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 140
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chrX:44874148-44874486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 46
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chrX:6406731-6406215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chrX:22870206-22869664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 285
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chrX:40070226-40070755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 179
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chrX:35847607-35847348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 176
               

               
Conread position:
               
5-398
               

               
Cow position:
               
chrX:12465414-12465007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 280
               

               
Conread position:
               
5-523
               

               
Cow position:
               
chrX:44193058-44193589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 176
               

               
Conread position:
               
5-525
               

               
Cow position:
               
chrX:23395989-23395452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 280
               

               
Conread position:
               
6-190
               

               
Cow position:
               
chrX:36250481-36250679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
80, 172
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chrX:34238155-34237915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
101, 70
               

               
Conread position:
               
6-239
               

               
Cow position:
               
chrX:37489106-37488860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
69, 171
               

               
Conread position:
               
6-324
               

               
Cow position:
               
chrX:16021001-16021328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
71, 169
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chrX:35240247-35239912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 168
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chrX:40384427-40384083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chrX:40601500-40601156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 150
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chrX:37134256-37134611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 70
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chrX:1947578-1947936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chrX:41879549-41879915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 91
               

               
Conread position:
               
6-395
               

               
Cow position:
               
chrX:12179060-12178653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 284
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chrX:27095500-27095094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
6-425
               

               
Cow position:
               
chrX:32584550-32584981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 279
               

               
Conread position:
               
6-445
               

               
Cow position:
               
chrX:35024436-35023995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 170
               

               
Conread position:
               
6-447
               

               
Cow position:
               
chrX:30159614-30160064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
6-478
               

               
Cow position:
               
chrX:31261253-31261739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 173
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:1550346-1549810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 279
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:4905609-4906142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 191
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:5353922-5354455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 235
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:6044108-6044605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:9898960-9899491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 222
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:13405909-13406441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:16359628-16360162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 277
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:16854009-16854520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:22493388-22492880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:23280390-23279872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:23572435-23572972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 280
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:26441878-26442404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 161
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:29915965-29916501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 140
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:30060269-30059741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 280
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:33584069-33583538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 25
               

               
Conread position:
               
6-525
               

               
Cow position:
               
chrX:34442061-34442583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 175
               

               
Conread position:
               
6-551
               

               
Cow position:
               
chrX:27616184-27615634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
7-424
               

               
Cow position:
               
chrX:29700573-29700991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
7-425
               

               
Cow position:
               
chrX:10440454-10440882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 69
               

               
Conread position:
               
7-486
               

               
Cow position:
               
chrX:18244362-18243877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 269
               

               
Conread position:
               
7-496
               

               
Cow position:
               
chrX:16711336-16710830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 278
               

               
Conread position:
               
7-525
               

               
Cow position:
               
chrX:27982990-27983508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 103
               

               
Conread position:
               
7-529
               

               
Cow position:
               
chrX:16808434-16808972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 278
               

               
Conread position:
               
7-530
               

               
Cow position:
               
chrX:30228734-30229271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 277
               

               
Conread position:
               
8-496
               

               
Cow position:
               
chrX:16703050-16702545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 277
               

               
Conread position:
               
8-525
               

               
Cow position:
               
chrX:2479248-2479783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 278
               

               
Conread position:
               
8-525
               

               
Cow position:
               
chrX:28557731-28557212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
9-521
               

               
Cow position:
               
chrX:21415245-21414716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 276
               

               
Conread position:
               
9-525
               

               
Cow position:
               
chrX:15140168-15140685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
9-525
               

               
Cow position:
               
chrX:28624383-28624909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 232
               

               
Conread position:
               
12-516
               

               
Cow position:
               
chrX:5365224-5365738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
13-375
               

               
Cow position:
               
chrX:30134965-30135346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 269
               

               
Conread position:
               
13-469
               

               
Cow position:
               
chrX:12310011-12310484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 276
               

               
Conread position:
               
13-525
               

               
Cow position:
               
chrX:15151301-15151819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
13-525
               

               
Cow position:
               
chrX:21389952-21389423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 272
               

               
Conread position:
               
14-523
               

               
Cow position:
               
chrX:35937708-35938218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 162
               

               
Conread position:
               
14-525
               

               
Cow position:
               
chrX:29892459-29891946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 270
               

               
Conread position:
               
15-354
               

               
Cow position:
               
chrX:6766371-6766717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 36
               

               
Conread position:
               
15-525
               

               
Cow position:
               
chrX:22811262-22810740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 265
               

               
Conread position:
               
17-525
               

               
Cow position:
               
chrX:7755275-7754751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 184
               

               
Conread position:
               
18-525
               

               
Cow position:
               
chrX:29099785-29099264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 266
               

               
Conread position:
               
23-332
               

               
Cow position:
               
chrX:23317048-23317370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 210
               

               
Conread position:
               
35-324
               

               
Cow position:
               
chrX:41527163-41527462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 143
               

               
Conread position:
               
42-525
               

               
Cow position:
               
chrX:21662381-21661860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 139
               

               
Conread position:
               
54-412
               

               
Cow position:
               
chrX:44901466-44901106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
19, 184
               

               
Conread position:
               
54-526
               

               
Cow position:
               
chrX:28646946-28647425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 197
               

               
Conread position:
               
66-525
               

               
Cow position:
               
chrX:9095951-9095488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 123
               

               
Conread position:
               
72-525
               

               
Cow position:
               
chrX:28605784-28606244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 151
               

               
Conread position:
               
81-481
               

               
Cow position:
               
chrX:12290020-12289624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
82-413
               

               
Cow position:
               
chrX:22308280-22308605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
83-525
               

               
Cow position:
               
chrX:29288290-29287843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
86-537
               

               
Cow position:
               
chrX:6235563-6236015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
87-524
               

               
Cow position:
               
chrX:25817530-25817971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
95-357
               

               
Cow position:
               
chrX:150755-150494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
95-522
               

               
Cow position:
               
chrX:26437008-26436579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
95-525
               

               
Cow position:
               
chrX:24317106-24316661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
95-525
               

               
Cow position:
               
chrX:45373824-45374254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
95-527
               

               
Cow position:
               
chrX:4767974-4767542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
96-439
               

               
Cow position:
               
chrX:3144911-3144565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
96-507
               

               
Cow position:
               
chrX:20675151-20674731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 77
               

               
Conread position:
               
99-498
               

               
Cow position:
               
chrX:3155305-3155706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
110-525
               

               
Cow position:
               
chrX:23221776-23222181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
120-525
               

               
Cow position:
               
chrX:22809508-22809110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
122-375
               

               
Cow position:
               
chrX:4130334-4130602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chrX:45042679-45042476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
151-442
               

               
Cow position:
               
chrX:3652884-3652602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 9
               

               
Conread position:
               
163-525
               

               
Cow position:
               
chrX:5375070-5375431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 105
               

               
Conread position:
               
163-525
               

               
Cow position:
               
chrX:27498036-27497677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 105
               

               
Conread position:
               
163-529
               

               
Cow position:
               
chrX:16803660-16804025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 105
               

               
Conread position:
               
168-395
               

               
Cow position:
               
chrX:158812-158587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
195-525
               

               
Cow position:
               
chrX:12996735-12997065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 73
               

               
Conread position:
               
204-525
               

               
Cow position:
               
chrX:9227736-9228056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
210-525
               

               
Cow position:
               
chrX:6655860-6656172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 58
               

               
Conread position:
               
210-525
               

               
Cow position:
               
chrX:6854558-6854868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 59
               

               
Conread position:
               
210-525
               

               
Cow position:
               
chrX:37815339-37815024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
214-405
               

               
Cow position:
               
chrX:28765952-28766139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
217-425
               

               
Cow position:
               
chrX:45200884-45201088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
229-527
               

               
Cow position:
               
chrX:37488098-37487790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 141
               

               
Conread position:
               
233-525
               

               
Cow position:
               
chrX:8104370-8104661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 48
               

               
Conread position:
               
246-384
               

               
Cow position:
               
chrX:16688180-16688044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
246-509
               

               
Cow position:
               
chrX:9535667-9535404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
277-541
               

               
Cow position:
               
chrX:32129871-32129605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 94
               

               
Conread position:
               
281-525
               

               
Cow position:
               
chrX:12186188-12185944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 64
               

               
Conread position:
               
282-525
               

               
Cow position:
               
chrX:865195-864953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 55
               

               
Conread position:
               
302-523
               

               
Cow position:
               
chrX:7177784-7177562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 71
               
Show alignments to all cow chromosomes.