Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-168
Cow position: chr1:32244521-32244345 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 118

Conread position: 1-175
Cow position: chr1:9443966-9443792 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 108

Conread position: 1-204
Cow position: chr1:29975721-29975509 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 96

Conread position: 1-204
Cow position: chr1:92642563-92642358 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 49

Conread position: 1-220
Cow position: chr1:57782889-57783111 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 1-221
Cow position: chr1:80856209-80856431 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 63

Conread position: 1-222
Cow position: chr1:63038121-63038353 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 64

Conread position: 1-228
Cow position: chr1:6795050-6794811 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 102

Conread position: 1-231
Cow position: chr1:6881344-6881117 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 96

Conread position: 1-234
Cow position: chr1:96025350-96025592 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 117

Conread position: 1-235
Cow position: chr1:13056649-13056411 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 140

Conread position: 1-235
Cow position: chr1:58889417-58889174 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 103

Conread position: 1-237
Cow position: chr1:73363789-73363564 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 52, 82

Conread position: 1-237
Cow position: chr1:85651888-85651658 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 98

Conread position: 1-240
Cow position: chr1:94526372-94526623 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 94

Conread position: 1-241
Cow position: chr1:5162170-5161926 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 45, 151

Conread position: 1-247
Cow position: chr1:26531699-26531448 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 131, 16

Conread position: 1-247
Cow position: chr1:26688595-26688339 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 44, 190

Conread position: 1-247
Cow position: chr1:31190228-31189980 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 113

Conread position: 1-247
Cow position: chr1:32341325-32341063 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 82

Conread position: 1-247
Cow position: chr1:53039821-53039576 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 100

Conread position: 1-247
Cow position: chr1:63314708-63314964 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 1-247
Cow position: chr1:65664946-65665185 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 103, 25

Conread position: 1-247
Cow position: chr1:74947243-74946985 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 233

Conread position: 1-247
Cow position: chr1:76096319-76096566 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 15

Conread position: 1-247
Cow position: chr1:80764655-80764402 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 185
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 44, 21

Conread position: 1-247
Cow position: chr1:95467457-95467205 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 95

Conread position: 1-247
Cow position: chr1:97622320-97622087 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 132, 33

Conread position: 1-248
Cow position: chr1:50345426-50345680 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 1-249
Cow position: chr1:5278533-5278279 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 70

Conread position: 1-249
Cow position: chr1:6734344-6734586 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 192
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 45, 15

Conread position: 1-249
Cow position: chr1:10719602-10719345 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 99

Conread position: 1-249
Cow position: chr1:29916287-29916547 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 222

Conread position: 1-249
Cow position: chr1:35844051-35843791 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 66

Conread position: 1-249
Cow position: chr1:52449728-52449487 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 99

Conread position: 1-249
Cow position: chr1:69004276-69004526 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 209

Conread position: 1-249
Cow position: chr1:80973734-80973473 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 17, 107

Conread position: 1-249
Cow position: chr1:89443597-89443344 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 48, 94

Conread position: 1-252
Cow position: chr1:101771785-101772038 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 18

Conread position: 1-259
Cow position: chr1:15691217-15691480 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 31, 18

Conread position: 1-266
Cow position: chr1:10064095-10063829 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 83

Conread position: 1-273
Cow position: chr1:50045679-50045965 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 210
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 45, 98

Conread position: 1-275
Cow position: chr1:90413259-90413541 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 79

Conread position: 1-278
Cow position: chr1:64189379-64189665 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 21, 259

Conread position: 1-280
Cow position: chr1:20581828-20582112 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 56

Conread position: 1-280
Cow position: chr1:62732457-62732736 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 98

Conread position: 1-281
Cow position: chr1:66355833-66355542 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 31, 109

Conread position: 1-284
Cow position: chr1:2997825-2998126 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 45, 100

Conread position: 1-284
Cow position: chr1:3657480-3657191 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 71

Conread position: 1-284
Cow position: chr1:44746745-44747035 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 98

Conread position: 1-284
Cow position: chr1:71136032-71136325 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 113

Conread position: 1-286
Cow position: chr1:58825426-58825717 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 48, 56

Conread position: 1-287
Cow position: chr1:7142969-7142683 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 217
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 45, 100

Conread position: 1-287
Cow position: chr1:33986632-33986344 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 44, 22

Conread position: 1-287
Cow position: chr1:38525470-38525786 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 29

Conread position: 1-287
Cow position: chr1:45638367-45638657 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 97

Conread position: 1-287
Cow position: chr1:46205697-46205987 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 100

Conread position: 1-287
Cow position: chr1:51904446-51904164 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 55, 16

Conread position: 1-287
Cow position: chr1:61736980-61737274 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 26

Conread position: 1-287
Cow position: chr1:75998577-75998293 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 44, 15

Conread position: 1-287
Cow position: chr1:96339631-96339912 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 97

Conread position: 1-288
Cow position: chr1:70534054-70533759 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 100, 48

Conread position: 1-288
Cow position: chr1:75347500-75347804 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 43, 0

Conread position: 1-288
Cow position: chr1:78791426-78791135 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 43, 15

Conread position: 1-292
Cow position: chr1:77118654-77118350 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 46, 15

Conread position: 1-294
Cow position: chr1:85411457-85411756 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 114

Conread position: 2-172
Cow position: chr1:57247318-57247493 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 2-208
Cow position: chr1:55202738-55202534 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 95

Conread position: 2-237
Cow position: chr1:9869968-9869738 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 39, 98

Conread position: 2-243
Cow position: chr1:85783406-85783643 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 37, 97

Conread position: 2-245
Cow position: chr1:29657708-29657948 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 8

Conread position: 2-247
Cow position: chr1:30441840-30442090 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 111

Conread position: 2-247
Cow position: chr1:95765204-95764960 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 15

Conread position: 2-273
Cow position: chr1:25793554-25793275 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 14, 135

Conread position: 2-273
Cow position: chr1:57119460-57119183 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 45, 69

Conread position: 2-273
Cow position: chr1:81161891-81162178 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 141, 47

Conread position: 2-281
Cow position: chr1:50634381-50634088 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 100

Conread position: 2-287
Cow position: chr1:7657428-7657141 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 17

Conread position: 2-287
Cow position: chr1:13195540-13195255 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 47, 98

Conread position: 2-344
Cow position: chr1:83747827-83748175 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 35

Conread position: 3-237
Cow position: chr1:71303011-71303234 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 96

Conread position: 3-237
Cow position: chr1:78750806-78750576 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 90

Conread position: 3-241
Cow position: chr1:20099253-20099493 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 100

Conread position: 3-249
Cow position: chr1:8192850-8192600 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 84

Conread position: 3-287
Cow position: chr1:69415832-69415532 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 110

Conread position: 4-211
Cow position: chr1:28944399-28944609 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 98

Conread position: 4-231
Cow position: chr1:30413469-30413708 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 12, 103

Conread position: 4-234
Cow position: chr1:2765294-2765534 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 104

Conread position: 4-249
Cow position: chr1:38692546-38692790 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 42, 97

Conread position: 4-249
Cow position: chr1:89548070-89548322 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 111

Conread position: 4-287
Cow position: chr1:90423199-90422904 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 18

Conread position: 4-298
Cow position: chr1:72731921-72732223 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 95

Conread position: 5-232
Cow position: chr1:73653755-73653524 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 62

Conread position: 5-235
Cow position: chr1:46311025-46311255 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 21

Conread position: 5-247
Cow position: chr1:92010201-92010446 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 96, 43

Conread position: 5-287
Cow position: chr1:49131228-49130953 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 109

Conread position: 6-282
Cow position: chr1:18283373-18283650 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 13

Conread position: 6-284
Cow position: chr1:31871309-31871603 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 40, 107

Conread position: 10-281
Cow position: chr1:25184023-25184283 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 36, 44

Conread position: 10-284
Cow position: chr1:21934286-21934008 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 15

Conread position: 11-238
Cow position: chr1:4441215-4440998 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 60

Conread position: 14-287
Cow position: chr1:51256914-51257192 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 16

Conread position: 14-302
Cow position: chr1:56643698-56643411 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 87

Conread position: 16-287
Cow position: chr1:4788429-4788712 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 72

Conread position: 22-287
Cow position: chr1:23041469-23041741 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 27

Conread position: 24-281
Cow position: chr1:47117362-47117111 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 22, 73

Conread position: 26-279
Cow position: chr1:22910270-22910523 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 69, 37

Conread position: 27-247
Cow position: chr1:48083629-48083861 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 17, 83

Conread position: 31-249
Cow position: chr1:41735708-41735485 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 93, 205

Conread position: 31-281
Cow position: chr1:30066531-30066793 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 16, 65

Conread position: 35-249
Cow position: chr1:54216935-54217151 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 98, 61

Conread position: 36-202
Cow position: chr1:7731649-7731815 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 97, 40

Conread position: 36-285
Cow position: chr1:28678440-28678699 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 13, 23

Conread position: 40-287
Cow position: chr1:15902415-15902673 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 77

Conread position: 42-284
Cow position: chr1:22777618-22777373 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 64, 49

Conread position: 48-247
Cow position: chr1:72807254-72807454 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 109, 34

Conread position: 48-281
Cow position: chr1:5102548-5102322 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 203, 49

Conread position: 48-281
Cow position: chr1:73900942-73901176 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 89, 7

Conread position: 48-284
Cow position: chr1:45479655-45479416 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 82, 46

Conread position: 48-335
Cow position: chr1:79115275-79115571 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 237

Conread position: 54-231
Cow position: chr1:62714013-62713838 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 33

Conread position: 54-285
Cow position: chr1:46646326-46646559 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 14, 103

Conread position: 60-223
Cow position: chr1:4451328-4451165 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 12

Conread position: 61-247
Cow position: chr1:64218483-64218296 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 41

Conread position: 64-287
Cow position: chr1:36614139-36613914 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 30

Conread position: 70-247
Cow position: chr1:54125262-54125091 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 36, 24

Conread position: 81-284
Cow position: chr1:97603669-97603464 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 165, 25

Conread position: 81-313
Cow position: chr1:70236297-70236064 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 52, 13

Conread position: 91-284
Cow position: chr1:53920565-53920762 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 17

Conread position: 96-262
Cow position: chr1:26424784-26424611 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 97-235
Cow position: chr1:56073493-56073353 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 62

Conread position: 97-249
Cow position: chr1:76170184-76170337 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 97-278
Cow position: chr1:5347042-5347218 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 8

Conread position: 97-287
Cow position: chr1:75183769-75183573 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 22

Conread position: 98-287
Cow position: chr1:3289160-3288970 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 116

Conread position: 98-287
Cow position: chr1:102466284-102466477 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 19

Conread position: 109-247
Cow position: chr1:71782672-71782534 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 24, 78

Conread position: 110-287
Cow position: chr1:45310280-45310097 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 126

Conread position: 113-287
Cow position: chr1:6130738-6130562 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 20, 154

Conread position: 122-306
Cow position: chr1:80384760-80384564 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 132-281
Cow position: chr1:89007732-89007582 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 27

Conread position: 132-287
Cow position: chr1:80897880-80897728 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 81, 26

Conread position: 138-284
Cow position: chr1:44086377-44086228 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 72

Conread position: 144-245
Cow position: chr1:27813403-27813305 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 145-284
Cow position: chr1:765231-765086 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 56

Conread position: 145-287
Cow position: chr1:92981309-92981456 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 148-304
Cow position: chr1:12227066-12226907 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 146

Conread position: 151-295
Cow position: chr1:63364666-63364815 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 79

Conread position: 152-292
Cow position: chr1:87149066-87149217 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 0

Conread position: 160-287
Cow position: chr1:75224961-75225091 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 108

Show alignments to all cow chromosomes.