Cow genome map
| Conread name: | rcmu12_j15.y1 |
| Conread position: | 1-157 |
| Cow position: | chr11:7333867-7333704 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 1-166 |
| Cow position: | chr11:62739075-62739247 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 93 |
| Conread position: | 1-174 |
| Cow position: | chr11:30952659-30952480 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 1-178 |
| Cow position: | chr11:42232460-42232647 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 1-178 |
| Cow position: | chr11:83404136-83404308 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 48 |
| Conread position: | 1-201 |
| Cow position: | chr11:53313711-53313508 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 71 |
| Conread position: | 1-210 |
| Cow position: | chr11:28691900-28691681 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 1-211 |
| Cow position: | chr11:41104469-41104263 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 63 |
| Conread position: | 1-230 |
| Cow position: | chr11:40396177-40396407 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 45, 114 |
| Conread position: | 1-230 |
| Cow position: | chr11:46001828-46001597 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 16, 83 |
| Conread position: | 1-232 |
| Cow position: | chr11:47169150-47168921 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 89 |
| Conread position: | 1-232 |
| Cow position: | chr11:80011984-80011753 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 98 |
| Conread position: | 1-235 |
| Cow position: | chr11:17964099-17963870 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 1-237 |
| Cow position: | chr11:46485195-46485418 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 1-237 |
| Cow position: | chr11:47903707-47903943 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 46, 97 |
| Conread position: | 1-237 |
| Cow position: | chr11:65970313-65970556 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 8, 101 |
| Conread position: | 1-238 |
| Cow position: | chr11:2908626-2908866 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 101 |
| Conread position: | 1-239 |
| Cow position: | chr11:4060196-4059959 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 132, 35 |
| Conread position: | 1-241 |
| Cow position: | chr11:53262630-53262867 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 84, 16 |
| Conread position: | 1-244 |
| Cow position: | chr11:46413431-46413680 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 45, 105 |
| Conread position: | 1-247 |
| Cow position: | chr11:7683828-7684067 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 1-247 |
| Cow position: | chr11:20491426-20491678 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 1-247 |
| Cow position: | chr11:35775194-35775448 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 1-247 |
| Cow position: | chr11:47193378-47193624 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 99 |
| Conread position: | 1-248 |
| Cow position: | chr11:24967312-24967552 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 22 |
| Conread position: | 1-249 |
| Cow position: | chr11:9253166-9252916 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 59 |
| Conread position: | 1-249 |
| Cow position: | chr11:12950091-12949837 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 1-249 |
| Cow position: | chr11:16000782-16001038 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 109 |
| Conread position: | 1-249 |
| Cow position: | chr11:19238301-19238053 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 45, 85 |
| Conread position: | 1-249 |
| Cow position: | chr11:67236266-67236512 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 19 |
| Conread position: | 1-256 |
| Cow position: | chr11:46705669-46705421 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 1-256 |
| Cow position: | chr11:56892676-56892934 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 1-269 |
| Cow position: | chr11:2394207-2393951 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 1-275 |
| Cow position: | chr11:31894132-31894415 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 97 |
| Conread position: | 1-279 |
| Cow position: | chr11:39808847-39809129 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 208 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 37, 245 |
| Conread position: | 1-280 |
| Cow position: | chr11:50951409-50951703 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 219 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 45, 103 |
| Conread position: | 1-281 |
| Cow position: | chr11:77683022-77683321 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 1-284 |
| Cow position: | chr11:7002080-7001777 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 46, 100 |
| Conread position: | 1-284 |
| Cow position: | chr11:8828772-8828480 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 1-284 |
| Cow position: | chr11:78543790-78544082 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 43, 100 |
| Conread position: | 1-287 |
| Cow position: | chr11:14308496-14308790 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 31 |
| Conread position: | 1-287 |
| Cow position: | chr11:20422358-20422074 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 1-287 |
| Cow position: | chr11:41271997-41272293 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 88, 110 |
| Conread position: | 1-287 |
| Cow position: | chr11:42519596-42519887 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 1-287 |
| Cow position: | chr11:43526273-43525966 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 1-287 |
| Cow position: | chr11:53452493-53452194 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-287 |
| Cow position: | chr11:65988084-65988376 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 101 |
| Conread position: | 1-287 |
| Cow position: | chr11:67745180-67745466 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 215 |
| Conread position: | 1-288 |
| Cow position: | chr11:43646552-43646254 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 1-288 |
| Cow position: | chr11:62574149-62573852 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 91 |
| Conread position: | 1-292 |
| Cow position: | chr11:83587891-83588182 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 1-293 |
| Cow position: | chr11:55821851-55821555 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 112 |
| Conread position: | 1-295 |
| Cow position: | chr11:19269219-19268930 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 52, 48 |
| Conread position: | 1-347 |
| Cow position: | chr11:45889812-45890167 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 16, 102 |
| Conread position: | 1-353 |
| Cow position: | chr11:70097141-70097486 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 2-211 |
| Cow position: | chr11:68422931-68423137 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 36, 14 |
| Conread position: | 2-232 |
| Cow position: | chr11:4115202-4114974 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 2-235 |
| Cow position: | chr11:9083330-9083575 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 39, 28 |
| Conread position: | 2-237 |
| Cow position: | chr11:65444991-65444747 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 2-247 |
| Cow position: | chr11:32439095-32438842 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 2-247 |
| Cow position: | chr11:56821397-56821132 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 2-249 |
| Cow position: | chr11:1668533-1668778 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 2-284 |
| Cow position: | chr11:43644245-43643937 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 44, 86 |
| Conread position: | 2-284 |
| Cow position: | chr11:63157053-63156772 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 31, 99 |
| Conread position: | 2-287 |
| Cow position: | chr11:63508286-63508566 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 2-287 |
| Cow position: | chr11:70399717-70399995 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 43, 100 |
| Conread position: | 2-328 |
| Cow position: | chr11:25331884-25331541 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 111 |
| Conread position: | 3-279 |
| Cow position: | chr11:48982983-48983261 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 44, 95 |
| Conread position: | 3-297 |
| Cow position: | chr11:4609976-4609691 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 42, 98 |
| Conread position: | 4-245 |
| Cow position: | chr11:38845398-38845157 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 4-261 |
| Cow position: | chr11:48650653-48650910 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 5-188 |
| Cow position: | chr11:76395639-76395823 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 51, 93 |
| Conread position: | 5-284 |
| Cow position: | chr11:51745214-51745495 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 96 |
| Conread position: | 5-287 |
| Cow position: | chr11:53445645-53445925 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 125, 14 |
| Conread position: | 5-304 |
| Cow position: | chr11:23047882-23047594 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 27, 91 |
| Conread position: | 6-247 |
| Cow position: | chr11:11752658-11752406 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 6-275 |
| Cow position: | chr11:47566089-47565794 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 6-287 |
| Cow position: | chr11:9874180-9874468 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 15 |
| Conread position: | 6-292 |
| Cow position: | chr11:26468005-26468308 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 7-233 |
| Cow position: | chr11:12032045-12031819 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 7-259 |
| Cow position: | chr11:37160651-37160911 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 8-281 |
| Cow position: | chr11:81518305-81518031 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 48, 15 |
| Conread position: | 9-284 |
| Cow position: | chr11:52832852-52832574 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 9-287 |
| Cow position: | chr11:37372172-37372466 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 99 |
| Conread position: | 10-219 |
| Cow position: | chr11:31575862-31576081 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 10-246 |
| Cow position: | chr11:28395334-28395585 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 93 |
| Conread position: | 11-249 |
| Cow position: | chr11:66401569-66401802 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 87 |
| Conread position: | 12-281 |
| Cow position: | chr11:696474-696199 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 125, 90 |
| Conread position: | 14-247 |
| Cow position: | chr11:29802703-29802481 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 15-287 |
| Cow position: | chr11:54244557-54244828 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 19-284 |
| Cow position: | chr11:27681369-27681653 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 21-295 |
| Cow position: | chr11:21473243-21472968 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 22-294 |
| Cow position: | chr11:84795870-84795585 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 21, 103 |
| Conread position: | 31-222 |
| Cow position: | chr11:7612771-7612580 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 102, 66 |
| Conread position: | 31-240 |
| Cow position: | chr11:36701644-36701853 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 32-245 |
| Cow position: | chr11:2484618-2484410 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 125, 7 |
| Conread position: | 33-249 |
| Cow position: | chr11:38667925-38667713 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 14, 64 |
| Conread position: | 39-248 |
| Cow position: | chr11:60137593-60137801 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 94, 55 |
| Conread position: | 40-287 |
| Cow position: | chr11:21136712-21136969 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 49-284 |
| Cow position: | chr11:34946163-34945919 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 81, 60 |
| Conread position: | 54-245 |
| Cow position: | chr11:9055873-9056066 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 157 |
| Conread position: | 54-292 |
| Cow position: | chr11:50953652-50953402 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 57-308 |
| Cow position: | chr11:17151591-17151845 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 194, 233 |
| Conread position: | 63-287 |
| Cow position: | chr11:1596533-1596307 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 8, 32 |
| Conread position: | 65-200 |
| Cow position: | chr11:25756246-25756381 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 75-245 |
| Cow position: | chr11:11785266-11785441 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 75-249 |
| Cow position: | chr11:72082642-72082816 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 77-221 |
| Cow position: | chr11:70995200-70995057 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 56, 67 |
| Conread position: | 85-232 |
| Cow position: | chr11:25861660-25861512 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 86-287 |
| Cow position: | chr11:19501914-19502123 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 95-284 |
| Cow position: | chr11:40275647-40275449 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 95-284 |
| Cow position: | chr11:40279139-40278941 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 97-278 |
| Cow position: | chr11:73499236-73499056 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 10, 21 |
| Conread position: | 98-247 |
| Cow position: | chr11:17452192-17452343 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 100-281 |
| Cow position: | chr11:72035316-72035508 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 102-287 |
| Cow position: | chr11:76392056-76391871 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 110-284 |
| Cow position: | chr11:19606286-19606464 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 111-278 |
| Cow position: | chr11:14941636-14941464 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 115-287 |
| Cow position: | chr11:6729647-6729823 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 121-287 |
| Cow position: | chr11:75255388-75255555 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 110 |
| Conread position: | 122-247 |
| Cow position: | chr11:8232469-8232340 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 11, 108 |
| Conread position: | 123-274 |
| Cow position: | chr11:34642248-34642091 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 123-285 |
| Cow position: | chr11:13039191-13039027 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 132-249 |
| Cow position: | chr11:13122020-13121903 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 132-287 |
| Cow position: | chr11:13306828-13306668 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 133-273 |
| Cow position: | chr11:46700007-46700150 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 144-281 |
| Cow position: | chr11:67940910-67941051 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 107, 45 |
| Conread position: | 145-249 |
| Cow position: | chr11:53141704-53141604 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 145-281 |
| Cow position: | chr11:373136-372995 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 147-287 |
| Cow position: | chr11:7333101-7332957 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 148-273 |
| Cow position: | chr11:5188140-5188267 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 99, 73 |
| Conread position: | 148-281 |
| Cow position: | chr11:34422227-34422093 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 95, 104 |
| Conread position: | 151-287 |
| Cow position: | chr11:54058005-54058146 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 160-280 |
| Cow position: | chr11:76007403-76007527 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 6 |
Show alignments to all cow chromosomes.