Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-129
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-203
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 16

Conread position: 1-226
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 40, 99

Conread position: 1-229
Cow position:
Alignm length: 243
Alignm identity: 185
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 45, 18

Conread position: 1-236
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 12, 97

Conread position: 1-245
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 104

Conread position: 1-247
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 132, 15

Conread position: 1-247
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 17, 145

Conread position: 1-248
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 45, 129

Conread position: 1-249
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 103

Conread position: 1-249
Cow position:
Alignm length: 258
Alignm identity: 185
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 31, 203

Conread position: 1-249
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 132, 48

Conread position: 1-249
Cow position:
Alignm length: 252
Alignm identity: 189
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 11, 50

Conread position: 1-249
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 16, 166

Conread position: 1-249
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 97

Conread position: 1-250
Cow position:
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 1-261
Cow position:
Alignm length: 272
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 6

Conread position: 1-266
Cow position:
Alignm length: 280
Alignm identity: 204
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 100

Conread position: 1-272
Cow position:
Alignm length: 279
Alignm identity: 183
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 158

Conread position: 1-273
Cow position:
Alignm length: 289
Alignm identity: 210
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 1-275
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 99

Conread position: 1-276
Cow position:
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 101

Conread position: 1-281
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 14

Conread position: 1-284
Cow position:
Alignm length: 296
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 15

Conread position: 1-284
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 17, 102

Conread position: 1-284
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 53, 103

Conread position: 1-284
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 81

Conread position: 1-284
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 189

Conread position: 1-287
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 96

Conread position: 1-287
Cow position:
Alignm length: 306
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 99

Conread position: 1-287
Cow position:
Alignm length: 300
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 112

Conread position: 1-287
Cow position:
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 29

Conread position: 1-287
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 31, 0

Conread position: 1-297
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 33

Conread position: 1-339
Cow position:
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 95

Conread position: 2-206
Cow position:
Alignm length: 212
Alignm identity: 164
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 2-246
Cow position:
Alignm length: 249
Alignm identity: 187
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 76

Conread position: 2-246
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 109

Conread position: 2-247
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 30, 100

Conread position: 2-287
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 101, 228

Conread position: 2-292
Cow position:
Alignm length: 304
Alignm identity: 202
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 219

Conread position: 3-247
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 43, 16

Conread position: 3-249
Cow position:
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 21

Conread position: 3-287
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 222

Conread position: 5-195
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 96

Conread position: 5-237
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 113

Conread position: 5-240
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 94

Conread position: 5-247
Cow position:
Alignm length: 259
Alignm identity: 183
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 113

Conread position: 5-287
Cow position:
Alignm length: 298
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 96

Conread position: 6-245
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 16

Conread position: 6-295
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 102

Conread position: 8-297
Cow position:
Alignm length: 294
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 48, 18

Conread position: 9-249
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 41

Conread position: 10-284
Cow position:
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 88

Conread position: 10-287
Cow position:
Alignm length: 288
Alignm identity: 210
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 36, 203

Conread position: 11-252
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 42, 47

Conread position: 11-287
Cow position:
Alignm length: 288
Alignm identity: 216
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 227

Conread position: 14-211
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 81

Conread position: 14-247
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 15-247
Cow position:
Alignm length: 241
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 98

Conread position: 20-287
Cow position:
Alignm length: 284
Alignm identity: 213
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 28, 79

Conread position: 25-275
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 24, 131

Conread position: 27-275
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 74

Conread position: 32-292
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 101, 32

Conread position: 36-247
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 62

Conread position: 40-221
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 58

Conread position: 46-247
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 47-237
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 17

Conread position: 48-256
Cow position:
Alignm length: 210
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 48

Conread position: 53-281
Cow position:
Alignm length: 235
Alignm identity: 182
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 81, 20

Conread position: 54-279
Cow position:
Alignm length: 235
Alignm identity: 178
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 51, 40

Conread position: 54-287
Cow position:
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 180

Conread position: 55-284
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 54

Conread position: 57-245
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 37

Conread position: 59-287
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 44

Conread position: 70-307
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 36

Conread position: 82-260
Cow position:
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 51, 137

Conread position: 86-281
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 91-287
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 107

Conread position: 95-240
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 96-273
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 37, 13

Conread position: 97-284
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 98-279
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 11

Conread position: 101-287
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 118-287
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 149

Conread position: 118-287
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 149

Conread position: 122-248
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 122-249
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 122-249
Cow position:
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 122-287
Cow position:
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 87

Conread position: 124-228
Cow position:
Alignm length: 109
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 139-295
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 112, 38

Conread position: 144-241
Cow position:
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 144-249
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 145-246
Cow position:
Alignm length: 102
Alignm identity: 86
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 145-248
Cow position:
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 146-245
Cow position:
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 148-247
Cow position:
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 148-281
Cow position:
Alignm length: 139
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 150-288
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 101, 58

Conread position: 151-249
Cow position:
Alignm length: 99
Alignm identity: 84
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 152-247
Cow position:
Alignm length: 96
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 152-247
Cow position:
Alignm length: 96
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 155-273
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 156-281
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 57

Conread position: 158-287
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 93, 0

Show alignments to all cow chromosomes.