Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-130
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 100

Conread position: 1-157
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 111

Conread position: 1-189
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 47

Conread position: 1-204
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 99

Conread position: 1-211
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 131

Conread position: 1-219
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 79

Conread position: 1-221
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 48

Conread position: 1-228
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 132, 38

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 160

Conread position: 1-237
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 89

Conread position: 1-247
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 49

Conread position: 1-247
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 194

Conread position: 1-247
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 25

Conread position: 1-247
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 33

Conread position: 1-247
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 150

Conread position: 1-247
Cow position:
Alignm length: 254
Alignm identity: 187
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 45, 15

Conread position: 1-249
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 1-249
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 131, 51

Conread position: 1-249
Cow position:
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 1-249
Cow position:
Alignm length: 258
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 25

Conread position: 1-268
Cow position:
Alignm length: 276
Alignm identity: 202
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 41, 102

Conread position: 1-269
Cow position:
Alignm length: 276
Alignm identity: 202
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 16, 88

Conread position: 1-269
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 95

Conread position: 1-279
Cow position:
Alignm length: 291
Alignm identity: 207
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 16, 102

Conread position: 1-281
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 40, 114

Conread position: 1-282
Cow position:
Alignm length: 290
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 18

Conread position: 1-284
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 18

Conread position: 1-287
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 27

Conread position: 1-287
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 18

Conread position: 1-287
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 101

Conread position: 1-287
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 100

Conread position: 1-289
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 44, 119

Conread position: 1-290
Cow position:
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 6

Conread position: 1-295
Cow position:
Alignm length: 304
Alignm identity: 202
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 86

Conread position: 2-235
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 39, 62

Conread position: 2-235
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 99

Conread position: 2-247
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 10, 95

Conread position: 2-247
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 113

Conread position: 2-261
Cow position:
Alignm length: 269
Alignm identity: 191
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 92

Conread position: 2-281
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 32

Conread position: 2-281
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 99

Conread position: 2-284
Cow position:
Alignm length: 301
Alignm identity: 220
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 117

Conread position: 2-287
Cow position:
Alignm length: 296
Alignm identity: 215
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 59, 15

Conread position: 2-290
Cow position:
Alignm length: 304
Alignm identity: 213
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 42, 132

Conread position: 2-307
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 260

Conread position: 3-211
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 99

Conread position: 3-260
Cow position:
Alignm length: 270
Alignm identity: 202
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 107

Conread position: 3-281
Cow position:
Alignm length: 295
Alignm identity: 196
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 40, 217

Conread position: 4-232
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 78

Conread position: 4-261
Cow position:
Alignm length: 268
Alignm identity: 208
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 41, 83

Conread position: 4-284
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 95

Conread position: 5-249
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 5-287
Cow position:
Alignm length: 296
Alignm identity: 198
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 92

Conread position: 10-199
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 39, 109

Conread position: 10-287
Cow position:
Alignm length: 298
Alignm identity: 202
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 137

Conread position: 14-281
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 123, 53

Conread position: 15-284
Cow position:
Alignm length: 284
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 32, 83

Conread position: 15-287
Cow position:
Alignm length: 286
Alignm identity: 211
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 19, 91

Conread position: 29-245
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 104, 65

Conread position: 31-280
Cow position:
Alignm length: 259
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 125, 63

Conread position: 31-288
Cow position:
Alignm length: 270
Alignm identity: 186
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 159

Conread position: 34-247
Cow position:
Alignm length: 220
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 60

Conread position: 48-249
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 40

Conread position: 49-237
Cow position:
Alignm length: 191
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 43

Conread position: 49-281
Cow position:
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 5

Conread position: 54-295
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 79, 241

Conread position: 55-281
Cow position:
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 27, 155

Conread position: 58-287
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 36

Conread position: 71-241
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 143

Conread position: 96-279
Cow position:
Alignm length: 191
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 163

Conread position: 96-281
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 114

Conread position: 97-249
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 123-275
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 83

Conread position: 132-269
Cow position:
Alignm length: 147
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 132-281
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 132-287
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 132-287
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 117, 76

Conread position: 138-287
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 113, 76

Conread position: 141-281
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 110

Conread position: 143-243
Cow position:
Alignm length: 101
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 145-275
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 6, 70

Conread position: 147-288
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 104, 64

Show alignments to all cow chromosomes.