Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-197
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 102

Conread position: 1-203
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 18

Conread position: 1-231
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 102

Conread position: 1-235
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 33, 102

Conread position: 1-236
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 97

Conread position: 1-237
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 102

Conread position: 1-237
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 164

Conread position: 1-244
Cow position:
Alignm length: 251
Alignm identity: 188
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 15

Conread position: 1-247
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 1-247
Cow position:
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 101

Conread position: 1-247
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 30

Conread position: 1-249
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 132, 29

Conread position: 1-249
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 45, 88

Conread position: 1-249
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 94

Conread position: 1-249
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 85

Conread position: 1-251
Cow position:
Alignm length: 259
Alignm identity: 196
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 16, 108

Conread position: 1-260
Cow position:
Alignm length: 273
Alignm identity: 196
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 45, 211

Conread position: 1-280
Cow position:
Alignm length: 307
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 1-281
Cow position:
Alignm length: 295
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 18

Conread position: 1-284
Cow position:
Alignm length: 296
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 96

Conread position: 1-287
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 117

Conread position: 1-287
Cow position:
Alignm length: 296
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 8

Conread position: 1-287
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 44, 94

Conread position: 1-287
Cow position:
Alignm length: 296
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 16, 111

Conread position: 1-287
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 125

Conread position: 1-302
Cow position:
Alignm length: 304
Alignm identity: 203
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 57

Conread position: 1-306
Cow position:
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 102

Conread position: 1-308
Cow position:
Alignm length: 324
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 48, 100

Conread position: 1-329
Cow position:
Alignm length: 340
Alignm identity: 226
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 44, 79

Conread position: 2-181
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 98

Conread position: 2-187
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 98

Conread position: 2-212
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 44, 85

Conread position: 2-221
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 20

Conread position: 2-235
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 100

Conread position: 2-238
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 102

Conread position: 2-245
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 40, 17

Conread position: 2-271
Cow position:
Alignm length: 286
Alignm identity: 214
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 14, 104

Conread position: 2-284
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 96

Conread position: 3-168
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 121

Conread position: 3-287
Cow position:
Alignm length: 303
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 125

Conread position: 4-284
Cow position:
Alignm length: 298
Alignm identity: 215
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 42, 15

Conread position: 4-295
Cow position:
Alignm length: 301
Alignm identity: 205
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 33, 96

Conread position: 5-241
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 14, 78

Conread position: 6-248
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 83

Conread position: 9-237
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 10-281
Cow position:
Alignm length: 280
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 87

Conread position: 10-287
Cow position:
Alignm length: 291
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 267

Conread position: 12-233
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 154

Conread position: 13-196
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 8

Conread position: 14-245
Cow position:
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 80

Conread position: 17-237
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 47

Conread position: 17-249
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 113

Conread position: 17-287
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 87, 30

Conread position: 18-249
Cow position:
Alignm length: 239
Alignm identity: 186
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 27, 80

Conread position: 19-237
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 38

Conread position: 19-247
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 192

Conread position: 20-239
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 62

Conread position: 21-247
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 25, 80

Conread position: 22-223
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 110, 27

Conread position: 22-269
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 24, 58

Conread position: 25-247
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 108, 11

Conread position: 31-237
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 31-281
Cow position:
Alignm length: 262
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 66

Conread position: 36-284
Cow position:
Alignm length: 258
Alignm identity: 184
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 59, 75

Conread position: 39-249
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 94, 113

Conread position: 39-298
Cow position:
Alignm length: 271
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 41-247
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 89, 53

Conread position: 54-284
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 186

Conread position: 62-304
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 140

Conread position: 63-287
Cow position:
Alignm length: 235
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 41, 30

Conread position: 78-284
Cow position:
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 16

Conread position: 90-219
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 97-253
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 109-247
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 117

Conread position: 109-287
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 122

Conread position: 111-246
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 35

Conread position: 117-249
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 87

Conread position: 136-280
Cow position:
Alignm length: 150
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 138-262
Cow position:
Alignm length: 130
Alignm identity: 110
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 113, 0

Conread position: 139-247
Cow position:
Alignm length: 109
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 145-281
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 116, 63

Conread position: 145-288
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 148-249
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 0

Show alignments to all cow chromosomes.