Cow genome map


           Conread name:
           rcmu12_j15.y1
        

               Conread position:
               1-129
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               52, 95
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 186
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               43, 100
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               14, 104
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               25, 100
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               50, 96
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               10, 102
               

               Conread position:
               1-247
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               29, 100
               

               Conread position:
               1-247
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               26, 98
               

               Conread position:
               1-273
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 45
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 107
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               43, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               45, 100
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               26, 100
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               15, 99
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               40, 105
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               45, 100
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               224
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               43, 25
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               44, 100
               

               Conread position:
               2-237
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               2-245
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               15, 210
               

               Conread position:
               4-196
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               43, 111
               

               Conread position:
               4-247
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               40, 97
               

               Conread position:
               4-249
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               42, 72
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 91
               

               Conread position:
               8-247
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               6, 82
               

               Conread position:
               9-281
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 61
               

               Conread position:
               10-187
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               10-232
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               46, 79
               

               Conread position:
               10-287
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 85
               

               Conread position:
               11-250
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               13-233
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               40, 36
               

               Conread position:
               22-282
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 14
               

               Conread position:
               23-287
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               83, 10
               

               Conread position:
               27-221
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               31-281
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               31-284
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               32-189
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               48-284
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               48-287
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               89, 57
               

               Conread position:
               48-287
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               85, 46
               

               Conread position:
               49-341
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               15, 46
               

               Conread position:
               54-227
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               54-249
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               55-257
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               57-237
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               62-249
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               62-287
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               75-247
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               84-282
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               49, 168
               

               Conread position:
               98-275
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               100-247
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               104-247
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               109-251
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               24, 35
               

               Conread position:
               132-248
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               133-246
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               133-249
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               146-249
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               146-268
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               146-334
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               105, 122
               

               Conread position:
               147-288
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               152-275
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 0
               
Show alignments to all cow chromosomes.