Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-154
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 84

Conread position: 1-168
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 99

Conread position: 1-187
Cow position:
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 100

Conread position: 1-197
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 18

Conread position: 1-210
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 21

Conread position: 1-229
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 169

Conread position: 1-232
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 101

Conread position: 1-240
Cow position:
Alignm length: 256
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 101

Conread position: 1-245
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 28

Conread position: 1-247
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 43, 103

Conread position: 1-247
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 217

Conread position: 1-249
Cow position:
Alignm length: 261
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 110

Conread position: 1-249
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 132, 16

Conread position: 1-273
Cow position:
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 1-281
Cow position:
Alignm length: 296
Alignm identity: 195
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 15

Conread position: 1-281
Cow position:
Alignm length: 293
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 18

Conread position: 1-281
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 45, 86

Conread position: 1-283
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 45, 16

Conread position: 1-284
Cow position:
Alignm length: 303
Alignm identity: 216
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 18

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 46, 64

Conread position: 1-287
Cow position:
Alignm length: 301
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 18

Conread position: 1-287
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 45, 9

Conread position: 1-287
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 132, 27

Conread position: 1-348
Cow position:
Alignm length: 369
Alignm identity: 257
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 16, 100

Conread position: 1-353
Cow position:
Alignm length: 364
Alignm identity: 231
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 65

Conread position: 2-231
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 173

Conread position: 2-247
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 95

Conread position: 2-248
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 44, 98

Conread position: 2-284
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 95

Conread position: 2-344
Cow position:
Alignm length: 360
Alignm identity: 239
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 112

Conread position: 3-247
Cow position:
Alignm length: 257
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 97

Conread position: 3-284
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 49

Conread position: 4-249
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 87

Conread position: 5-249
Cow position:
Alignm length: 249
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 16

Conread position: 5-249
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 9-248
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 225

Conread position: 11-249
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 18, 26

Conread position: 12-273
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 34, 72

Conread position: 13-287
Cow position:
Alignm length: 285
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 84

Conread position: 14-292
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 35, 62

Conread position: 17-293
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 31, 85

Conread position: 23-247
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 29-247
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 90

Conread position: 30-212
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 68

Conread position: 33-238
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 48, 16

Conread position: 36-241
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 59

Conread position: 36-315
Cow position:
Alignm length: 291
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 54

Conread position: 48-230
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 57, 24

Conread position: 48-346
Cow position:
Alignm length: 304
Alignm identity: 220
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 203, 57

Conread position: 60-251
Cow position:
Alignm length: 193
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 70, 33

Conread position: 95-254
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 9

Conread position: 96-287
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 152

Conread position: 102-245
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 108-284
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 145, 15

Conread position: 110-287
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 42

Conread position: 111-287
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 115-281
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 25

Conread position: 124-281
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 127, 27

Conread position: 124-295
Cow position:
Alignm length: 179
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 145

Conread position: 132-241
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 132-273
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 119, 97

Conread position: 137-287
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 145-295
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 75

Conread position: 150-281
Cow position:
Alignm length: 137
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 99, 80

Show alignments to all cow chromosomes.