Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-185
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 100

Conread position: 1-194
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 101

Conread position: 1-202
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 45, 15

Conread position: 1-203
Cow position:
Alignm length: 204
Alignm identity: 142
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 132, 28

Conread position: 1-211
Cow position:
Alignm length: 217
Alignm identity: 163
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 45, 34

Conread position: 1-234
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 63

Conread position: 1-235
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 104

Conread position: 1-235
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 25

Conread position: 1-237
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 134

Conread position: 1-237
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 114

Conread position: 1-237
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 1-241
Cow position:
Alignm length: 258
Alignm identity: 188
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 96

Conread position: 1-241
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 95

Conread position: 1-247
Cow position:
Alignm length: 256
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 172

Conread position: 1-247
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 98

Conread position: 1-247
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 96

Conread position: 1-249
Cow position:
Alignm length: 259
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 109

Conread position: 1-249
Cow position:
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 106

Conread position: 1-260
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 93

Conread position: 1-281
Cow position:
Alignm length: 308
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 101

Conread position: 1-284
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 81

Conread position: 1-284
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 21

Conread position: 1-284
Cow position:
Alignm length: 294
Alignm identity: 216
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 48, 86

Conread position: 1-287
Cow position:
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 158

Conread position: 1-287
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 95

Conread position: 1-298
Cow position:
Alignm length: 301
Alignm identity: 205
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 86

Conread position: 1-304
Cow position:
Alignm length: 319
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 36, 100

Conread position: 1-307
Cow position:
Alignm length: 322
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 96

Conread position: 1-308
Cow position:
Alignm length: 323
Alignm identity: 232
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 15, 101

Conread position: 1-314
Cow position:
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 97

Conread position: 1-344
Cow position:
Alignm length: 375
Alignm identity: 249
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 121

Conread position: 2-235
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 106

Conread position: 2-247
Cow position:
Alignm length: 259
Alignm identity: 193
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 17

Conread position: 2-247
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 43, 88

Conread position: 2-314
Cow position:
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 115

Conread position: 3-204
Cow position:
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 95

Conread position: 3-247
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 43, 113

Conread position: 3-255
Cow position:
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 13

Conread position: 3-281
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 73

Conread position: 4-232
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 15

Conread position: 4-237
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 24, 91

Conread position: 4-246
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 126, 31

Conread position: 4-247
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 49, 15

Conread position: 4-248
Cow position:
Alignm length: 256
Alignm identity: 197
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 37, 12

Conread position: 4-287
Cow position:
Alignm length: 299
Alignm identity: 214
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 10, 100

Conread position: 8-281
Cow position:
Alignm length: 284
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 17, 27

Conread position: 9-284
Cow position:
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 90

Conread position: 10-287
Cow position:
Alignm length: 288
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 96, 39

Conread position: 11-207
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 101

Conread position: 12-210
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 128

Conread position: 12-284
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 44, 10

Conread position: 13-281
Cow position:
Alignm length: 288
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 88

Conread position: 14-245
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 68

Conread position: 14-248
Cow position:
Alignm length: 239
Alignm identity: 176
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 17

Conread position: 18-287
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 58

Conread position: 19-287
Cow position:
Alignm length: 275
Alignm identity: 202
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 115, 14

Conread position: 23-297
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 195

Conread position: 26-249
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 0

Conread position: 30-292
Cow position:
Alignm length: 274
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 75, 9

Conread position: 31-287
Cow position:
Alignm length: 268
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 68

Conread position: 36-296
Cow position:
Alignm length: 270
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 58

Conread position: 39-287
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 98, 0

Conread position: 48-237
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 86-287
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 18

Conread position: 88-273
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 45, 90

Conread position: 90-249
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 96-240
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 116-287
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 18

Conread position: 117-256
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 114

Conread position: 117-273
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 31

Conread position: 123-284
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 29

Conread position: 138-287
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 0

Conread position: 145-282
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 116, 10

Conread position: 147-249
Cow position:
Alignm length: 103
Alignm identity: 90
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 157-279
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 118, 0

Show alignments to all cow chromosomes.