Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-111
Cow position: chr23:23470816-23470927 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-219
Cow position: chr23:41590035-41589820 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 57, 52

Conread position: 1-228
Cow position: chr23:20752888-20753118 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 45, 174

Conread position: 1-232
Cow position: chr23:22588391-22588164 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 92

Conread position: 1-235
Cow position: chr23:36146581-36146358 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 92

Conread position: 1-239
Cow position: chr23:29393325-29393554 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 131, 32

Conread position: 1-240
Cow position: chr23:9711709-9711472 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 92

Conread position: 1-241
Cow position: chr23:11434385-11434136 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 0

Conread position: 1-245
Cow position: chr23:35362898-35362650 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 87

Conread position: 1-247
Cow position: chr23:13359691-13359956 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 1-247
Cow position: chr23:15872822-15872562 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 130

Conread position: 1-247
Cow position: chr23:16072445-16072214 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 18

Conread position: 1-247
Cow position: chr23:16237378-16237126 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 196
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 16, 101

Conread position: 1-249
Cow position: chr23:30773803-30773567 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 94

Conread position: 1-273
Cow position: chr23:5389579-5389860 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 188

Conread position: 1-281
Cow position: chr23:16793473-16793749 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 133, 47

Conread position: 1-284
Cow position: chr23:37224189-37223901 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 96

Conread position: 1-285
Cow position: chr23:21659818-21660117 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 204
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 100

Conread position: 1-287
Cow position: chr23:14126447-14126738 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 95

Conread position: 1-290
Cow position: chr23:21866623-21866915 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 18

Conread position: 1-334
Cow position: chr23:29271997-29272337 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 224
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 25

Conread position: 2-239
Cow position: chr23:1677277-1677517 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 109

Conread position: 2-246
Cow position: chr23:17092608-17092368 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 133, 15

Conread position: 2-247
Cow position: chr23:19636384-19636133 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 14

Conread position: 2-247
Cow position: chr23:20171452-20171711 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 2-247
Cow position: chr23:30307787-30308038 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 20

Conread position: 2-247
Cow position: chr23:40862219-40862477 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 44, 0

Conread position: 2-249
Cow position: chr23:28895081-28894823 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 2-284
Cow position: chr23:22660703-22660417 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 46

Conread position: 3-266
Cow position: chr23:30210467-30210202 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 98

Conread position: 4-280
Cow position: chr23:28700881-28701155 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 13, 64

Conread position: 4-284
Cow position: chr23:20585811-20585529 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 129, 21

Conread position: 6-249
Cow position: chr23:16058477-16058714 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 202

Conread position: 10-211
Cow position: chr23:31607271-31607060 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 36, 82

Conread position: 12-260
Cow position: chr23:23192258-23192011 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 85, 98

Conread position: 13-173
Cow position: chr23:24515993-24515833 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 119, 36

Conread position: 19-287
Cow position: chr23:4955932-4956194 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 114, 38

Conread position: 19-287
Cow position: chr23:21276129-21275844 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 104

Conread position: 21-287
Cow position: chr23:18326701-18326979 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 24, 92

Conread position: 22-207
Cow position: chr23:7550756-7550564 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 64

Conread position: 22-281
Cow position: chr23:17000608-17000866 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 25, 98

Conread position: 25-247
Cow position: chr23:1717639-1717419 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 51

Conread position: 32-287
Cow position: chr23:35155285-35155549 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 37, 63

Conread position: 41-267
Cow position: chr23:35498106-35497875 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 10

Conread position: 48-211
Cow position: chr23:22418925-22419077 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 49-247
Cow position: chr23:26217492-26217690 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 81, 113

Conread position: 50-248
Cow position: chr23:14543292-14543091 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 57, 44

Conread position: 56-287
Cow position: chr23:7611205-7611434 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 77, 26

Conread position: 70-284
Cow position: chr23:36082531-36082757 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 16

Conread position: 92-249
Cow position: chr23:6667436-6667583 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 32

Conread position: 96-230
Cow position: chr23:18495772-18495909 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 116

Conread position: 97-213
Cow position: chr23:23974895-23975006 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 7

Conread position: 102-247
Cow position: chr23:13319925-13320067 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 43

Conread position: 106-339
Cow position: chr23:11564388-11564153 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 104

Conread position: 112-273
Cow position: chr23:8930147-8929979 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 136-278
Cow position: chr23:23470929-23471075 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 105, 35

Conread position: 138-281
Cow position: chr23:19791996-19792135 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 117
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 147-241
Cow position: chr23:10066440-10066346 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.