Cow genome map
Conread name: | rcmu12_j15.y1 |
Conread position: | 1-111 |
Cow position: | chr23:23470816-23470927 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-219 |
Cow position: | chr23:41590035-41589820 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 170 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 57, 52 |
Conread position: | 1-228 |
Cow position: | chr23:20752888-20753118 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 45, 174 |
Conread position: | 1-232 |
Cow position: | chr23:22588391-22588164 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 178 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 45, 92 |
Conread position: | 1-235 |
Cow position: | chr23:36146581-36146358 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 166 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 45, 92 |
Conread position: | 1-239 |
Cow position: | chr23:29393325-29393554 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 182 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 131, 32 |
Conread position: | 1-240 |
Cow position: | chr23:9711709-9711472 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 179 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 42, 92 |
Conread position: | 1-241 |
Cow position: | chr23:11434385-11434136 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 187 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 1-245 |
Cow position: | chr23:35362898-35362650 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 167 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 46, 87 |
Conread position: | 1-247 |
Cow position: | chr23:13359691-13359956 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 185 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 1-247 |
Cow position: | chr23:15872822-15872562 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 181 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 42, 130 |
Conread position: | 1-247 |
Cow position: | chr23:16072445-16072214 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 173 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 31, 18 |
Conread position: | 1-247 |
Cow position: | chr23:16237378-16237126 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 196 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 16, 101 |
Conread position: | 1-249 |
Cow position: | chr23:30773803-30773567 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 184 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 38, 94 |
Conread position: | 1-273 |
Cow position: | chr23:5389579-5389860 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 193 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 45, 188 |
Conread position: | 1-281 |
Cow position: | chr23:16793473-16793749 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 213 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 133, 47 |
Conread position: | 1-284 |
Cow position: | chr23:37224189-37223901 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 96 |
Conread position: | 1-285 |
Cow position: | chr23:21659818-21660117 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 204 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 41, 100 |
Conread position: | 1-287 |
Cow position: | chr23:14126447-14126738 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 95 |
Conread position: | 1-290 |
Cow position: | chr23:21866623-21866915 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 201 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 31, 18 |
Conread position: | 1-334 |
Cow position: | chr23:29271997-29272337 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 224 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 129, 25 |
Conread position: | 2-239 |
Cow position: | chr23:1677277-1677517 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 160 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 16, 109 |
Conread position: | 2-246 |
Cow position: | chr23:17092608-17092368 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 176 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 133, 15 |
Conread position: | 2-247 |
Cow position: | chr23:19636384-19636133 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 187 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 44, 14 |
Conread position: | 2-247 |
Cow position: | chr23:20171452-20171711 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 175 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 2-247 |
Cow position: | chr23:30307787-30308038 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 181 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 54, 20 |
Conread position: | 2-247 |
Cow position: | chr23:40862219-40862477 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 190 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 2-249 |
Cow position: | chr23:28895081-28894823 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 17 |
Conread position: | 2-284 |
Cow position: | chr23:22660703-22660417 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 46 |
Conread position: | 3-266 |
Cow position: | chr23:30210467-30210202 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 191 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 42, 98 |
Conread position: | 4-280 |
Cow position: | chr23:28700881-28701155 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 192 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 13, 64 |
Conread position: | 4-284 |
Cow position: | chr23:20585811-20585529 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 211 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 129, 21 |
Conread position: | 6-249 |
Cow position: | chr23:16058477-16058714 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 176 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 40, 202 |
Conread position: | 10-211 |
Cow position: | chr23:31607271-31607060 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 162 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 36, 82 |
Conread position: | 12-260 |
Cow position: | chr23:23192258-23192011 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 85, 98 |
Conread position: | 13-173 |
Cow position: | chr23:24515993-24515833 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 119, 36 |
Conread position: | 19-287 |
Cow position: | chr23:4955932-4956194 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 190 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 114, 38 |
Conread position: | 19-287 |
Cow position: | chr23:21276129-21275844 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 208 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 32, 104 |
Conread position: | 21-287 |
Cow position: | chr23:18326701-18326979 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 208 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 24, 92 |
Conread position: | 22-207 |
Cow position: | chr23:7550756-7550564 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 147 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 23, 64 |
Conread position: | 22-281 |
Cow position: | chr23:17000608-17000866 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 189 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 25, 98 |
Conread position: | 25-247 |
Cow position: | chr23:1717639-1717419 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 160 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 29, 51 |
Conread position: | 32-287 |
Cow position: | chr23:35155285-35155549 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 187 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 37, 63 |
Conread position: | 41-267 |
Cow position: | chr23:35498106-35497875 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 167 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 15, 10 |
Conread position: | 48-211 |
Cow position: | chr23:22418925-22419077 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 49-247 |
Cow position: | chr23:26217492-26217690 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 146 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 81, 113 |
Conread position: | 50-248 |
Cow position: | chr23:14543292-14543091 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 151 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 57, 44 |
Conread position: | 56-287 |
Cow position: | chr23:7611205-7611434 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 178 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 77, 26 |
Conread position: | 70-284 |
Cow position: | chr23:36082531-36082757 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 34, 16 |
Conread position: | 92-249 |
Cow position: | chr23:6667436-6667583 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 12, 32 |
Conread position: | 96-230 |
Cow position: | chr23:18495772-18495909 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 11, 116 |
Conread position: | 97-213 |
Cow position: | chr23:23974895-23975006 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 97 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 37, 7 |
Conread position: | 102-247 |
Cow position: | chr23:13319925-13320067 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 31, 43 |
Conread position: | 106-339 |
Cow position: | chr23:11564388-11564153 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 165 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 27, 104 |
Conread position: | 112-273 |
Cow position: | chr23:8930147-8929979 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 136-278 |
Cow position: | chr23:23470929-23471075 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 116 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 105, 35 |
Conread position: | 138-281 |
Cow position: | chr23:19791996-19792135 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 117 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 147-241 |
Cow position: | chr23:10066440-10066346 (view UCSC Genome Browser custom track) |
Alignm length: | 95 |
Alignm identity: | 80 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.