Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-175
Cow position: chr25:36644081-36643907 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 97

Conread position: 1-206
Cow position: chr25:9519196-9519404 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 102, 93

Conread position: 1-210
Cow position: chr25:12234887-12234687 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 96

Conread position: 1-222
Cow position: chr25:16560306-16560073 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 208

Conread position: 1-232
Cow position: chr25:5972342-5972568 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 57

Conread position: 1-237
Cow position: chr25:16007664-16007896 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 45, 53

Conread position: 1-237
Cow position: chr25:32606451-32606210 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 87

Conread position: 1-238
Cow position: chr25:11989643-11989397 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 104

Conread position: 1-240
Cow position: chr25:18161161-18161401 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 18

Conread position: 1-247
Cow position: chr25:10012177-10011935 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 40, 102

Conread position: 1-247
Cow position: chr25:10748632-10748375 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 9

Conread position: 1-247
Cow position: chr25:14570242-14570497 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 100

Conread position: 1-248
Cow position: chr25:22909973-22909734 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 129, 47

Conread position: 1-249
Cow position: chr25:16691534-16691784 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 40, 100

Conread position: 1-261
Cow position: chr25:33112097-33111836 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 85

Conread position: 1-281
Cow position: chr25:26457813-26457513 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 1-282
Cow position: chr25:36501367-36501080 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 113

Conread position: 1-284
Cow position: chr25:18000654-18000364 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 87

Conread position: 1-285
Cow position: chr25:8512220-8511924 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 113

Conread position: 1-287
Cow position: chr25:22575646-22575359 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 96

Conread position: 1-287
Cow position: chr25:23410534-23410829 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 1-292
Cow position: chr25:14467211-14466924 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 20, 100

Conread position: 1-350
Cow position: chr25:40957117-40956755 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 216

Conread position: 2-201
Cow position: chr25:22735995-22736194 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 24

Conread position: 2-281
Cow position: chr25:20625054-20624773 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 14

Conread position: 2-284
Cow position: chr25:24405864-24405566 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 97

Conread position: 2-284
Cow position: chr25:33245803-33246080 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 38

Conread position: 2-298
Cow position: chr25:4716147-4716438 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 46

Conread position: 3-287
Cow position: chr25:8576566-8576863 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 92

Conread position: 4-237
Cow position: chr25:33411132-33411373 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 12

Conread position: 5-248
Cow position: chr25:22542919-22542686 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 26

Conread position: 5-287
Cow position: chr25:24136561-24136275 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 41, 92

Conread position: 6-247
Cow position: chr25:26240418-26240664 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 41, 106

Conread position: 10-234
Cow position: chr25:13560325-13560100 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 120, 39

Conread position: 14-247
Cow position: chr25:27535030-27534793 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 96

Conread position: 14-261
Cow position: chr25:34970347-34970604 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 26, 87

Conread position: 15-247
Cow position: chr25:14075187-14075428 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 28, 67

Conread position: 31-211
Cow position: chr25:13727479-13727298 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 15, 25

Conread position: 40-288
Cow position: chr25:8080638-8080896 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 9, 131

Conread position: 48-274
Cow position: chr25:20811447-20811218 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 58

Conread position: 59-236
Cow position: chr25:15358426-15358253 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 65-247
Cow position: chr25:18239448-18239634 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 99-266
Cow position: chr25:30021045-30021219 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 144-287
Cow position: chr25:10204646-10204498 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 163-287
Cow position: chr25:40845613-40845736 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 0

Show alignments to all cow chromosomes.