Cow genome map


           Conread name:
           rcmu12_j15.y1
        

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 98
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               46, 80
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               44, 111
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               1-249
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               1-253
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 25
               

               Conread position:
               1-262
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 163
               

               Conread position:
               1-280
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 99
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-284
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               32, 95
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               45, 89
               

               Conread position:
               1-305
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               10, 70
               

               Conread position:
               1-338
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               2-247
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               105, 69
               

               Conread position:
               2-279
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               44, 96
               

               Conread position:
               2-281
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               43, 129
               

               Conread position:
               2-287
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 99
               

               Conread position:
               3-211
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               3-237
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               43, 61
               

               Conread position:
               5-241
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 215
               

               Conread position:
               6-245
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 95
               

               Conread position:
               7-287
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 140
               

               Conread position:
               9-326
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               10-294
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 91
               

               Conread position:
               11-248
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               35, 90
               

               Conread position:
               11-281
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               35, 84
               

               Conread position:
               19-247
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               26, 74
               

               Conread position:
               19-320
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               232, 30
               

               Conread position:
               23-247
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               110, 26
               

               Conread position:
               26-247
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               80, 68
               

               Conread position:
               27-240
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               48-232
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               48-249
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               49-249
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               88, 156
               

               Conread position:
               54-232
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               57-288
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 37
               

               Conread position:
               61-284
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               69, 37
               

               Conread position:
               71-286
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               83-252
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               84-281
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               21, 124
               

               Conread position:
               97-249
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-284
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               36, 7
               

               Conread position:
               99-210
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               109-287
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               135-241
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               147-287
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               152-250
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               165-287
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               86, 0
               
Show alignments to all cow chromosomes.