Cow genome map
Conread name: | rcmu12_j15.y1 |
Conread position: | 1-231 |
Cow position: | chr27:465041-464816 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 167 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 40, 99 |
Conread position: | 1-237 |
Cow position: | chr27:30560996-30560764 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 175 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 48, 97 |
Conread position: | 1-241 |
Cow position: | chr27:11416532-11416286 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 191 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 45, 100 |
Conread position: | 1-246 |
Cow position: | chr27:6454294-6454040 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 190 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 43, 18 |
Conread position: | 1-246 |
Cow position: | chr27:27053376-27053125 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 175 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 31, 103 |
Conread position: | 1-247 |
Cow position: | chr27:14937341-14937600 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 102 |
Conread position: | 1-247 |
Cow position: | chr27:20765878-20766124 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 178 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 43, 85 |
Conread position: | 1-247 |
Cow position: | chr27:21138906-21138659 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 184 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 40, 15 |
Conread position: | 1-247 |
Cow position: | chr27:24341982-24341733 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 174 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 48 |
Conread position: | 1-249 |
Cow position: | chr27:19601460-19601201 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 201 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 60, 96 |
Conread position: | 1-269 |
Cow position: | chr27:15319530-15319265 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 186 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 21, 82 |
Conread position: | 1-273 |
Cow position: | chr27:26440977-26441250 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 202 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 45, 98 |
Conread position: | 1-275 |
Cow position: | chr27:8048657-8048935 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 100 |
Conread position: | 1-281 |
Cow position: | chr27:16493653-16493376 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 210 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 129, 45 |
Conread position: | 1-284 |
Cow position: | chr27:25970475-25970194 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 197 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 41, 69 |
Conread position: | 1-284 |
Cow position: | chr27:26299920-26299633 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 210 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 43, 83 |
Conread position: | 1-287 |
Cow position: | chr27:23662525-23662809 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 193 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 132, 18 |
Conread position: | 2-211 |
Cow position: | chr27:18186321-18186111 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 155 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 42, 96 |
Conread position: | 2-275 |
Cow position: | chr27:30790531-30790269 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 198 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 9, 53 |
Conread position: | 2-284 |
Cow position: | chr27:25998783-25998493 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 219 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 43, 15 |
Conread position: | 2-284 |
Cow position: | chr27:30365394-30365105 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 212 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 44, 19 |
Conread position: | 3-201 |
Cow position: | chr27:12424836-12425042 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 161 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 43, 18 |
Conread position: | 3-210 |
Cow position: | chr27:23600349-23600138 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 165 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 14, 70 |
Conread position: | 4-249 |
Cow position: | chr27:19909458-19909195 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 185 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 43, 54 |
Conread position: | 4-281 |
Cow position: | chr27:783775-783496 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 201 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 45, 13 |
Conread position: | 4-287 |
Cow position: | chr27:12244053-12244342 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 198 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 126, 30 |
Conread position: | 5-281 |
Cow position: | chr27:6160062-6159777 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 202 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 41, 111 |
Conread position: | 6-222 |
Cow position: | chr27:11356464-11356684 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 158 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 39, 91 |
Conread position: | 7-294 |
Cow position: | chr27:26492626-26492918 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 207 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 33, 102 |
Conread position: | 11-219 |
Cow position: | chr27:23959366-23959160 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 156 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 29, 84 |
Conread position: | 12-287 |
Cow position: | chr27:19083645-19083933 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 198 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 20, 101 |
Conread position: | 17-284 |
Cow position: | chr27:25982666-25982931 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 202 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 47, 13 |
Conread position: | 19-281 |
Cow position: | chr27:2354708-2354972 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 174 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 25, 33 |
Conread position: | 20-287 |
Cow position: | chr27:22108147-22108422 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 200 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 30, 77 |
Conread position: | 40-211 |
Cow position: | chr27:19869868-19869695 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 130 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 9, 55 |
Conread position: | 48-245 |
Cow position: | chr27:24224862-24225068 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 145 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 49, 67 |
Conread position: | 48-278 |
Cow position: | chr27:1536687-1536929 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 181 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 82, 217 |
Conread position: | 58-287 |
Cow position: | chr27:12247698-12247471 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 177 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 75, 34 |
Conread position: | 65-306 |
Cow position: | chr27:13970374-13970616 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 171 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 68, 139 |
Conread position: | 96-249 |
Cow position: | chr27:21970902-21971055 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 122 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 37, 15 |
Conread position: | 97-247 |
Cow position: | chr27:13958359-13958515 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 104-281 |
Cow position: | chr27:10119102-10119293 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 145 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 114-295 |
Cow position: | chr27:25880068-25879877 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 139 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 116-284 |
Cow position: | chr27:16525880-16526054 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 131 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 122-281 |
Cow position: | chr27:11746547-11746378 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 132-288 |
Cow position: | chr27:6347807-6347969 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 101, 152 |
Conread position: | 132-346 |
Cow position: | chr27:18219341-18219133 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 167 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 145-273 |
Cow position: | chr27:21991461-21991329 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 106, 11 |
Conread position: | 148-281 |
Cow position: | chr27:17875214-17875352 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 148-284 |
Cow position: | chr27:1899644-1899784 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 151-284 |
Cow position: | chr27:9692095-9692230 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 97, 11 |
Conread position: | 152-287 |
Cow position: | chr27:31339830-31339969 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 99, 20 |
Conread position: | 169-287 |
Cow position: | chr27:7983196-7983319 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 179-287 |
Cow position: | chr27:11322500-11322392 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 90 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.