Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-162
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 1-209
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 117

Conread position: 1-211
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 45, 15

Conread position: 1-221
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 105, 25

Conread position: 1-221
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 87

Conread position: 1-228
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 46, 209

Conread position: 1-229
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 98

Conread position: 1-232
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 111

Conread position: 1-233
Cow position:
Alignm length: 234
Alignm identity: 179
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 133, 56

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 6

Conread position: 1-237
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 77

Conread position: 1-237
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 140

Conread position: 1-237
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 94

Conread position: 1-237
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 99

Conread position: 1-237
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 94

Conread position: 1-241
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 18

Conread position: 1-246
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 45, 112

Conread position: 1-247
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 92

Conread position: 1-247
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 98

Conread position: 1-247
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 225

Conread position: 1-247
Cow position:
Alignm length: 252
Alignm identity: 170
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 132, 18

Conread position: 1-247
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 97

Conread position: 1-249
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 44, 92

Conread position: 1-249
Cow position:
Alignm length: 260
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 114

Conread position: 1-249
Cow position:
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 85

Conread position: 1-251
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 18

Conread position: 1-259
Cow position:
Alignm length: 274
Alignm identity: 197
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 48, 0

Conread position: 1-269
Cow position:
Alignm length: 278
Alignm identity: 198
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 50

Conread position: 1-273
Cow position:
Alignm length: 280
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 15

Conread position: 1-275
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 0

Conread position: 1-280
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 109

Conread position: 1-281
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 15, 218

Conread position: 1-281
Cow position:
Alignm length: 303
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 37, 117

Conread position: 1-281
Cow position:
Alignm length: 313
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 1-281
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 103

Conread position: 1-283
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 90

Conread position: 1-284
Cow position:
Alignm length: 302
Alignm identity: 207
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 99

Conread position: 1-284
Cow position:
Alignm length: 301
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 43, 101

Conread position: 1-284
Cow position:
Alignm length: 288
Alignm identity: 198
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 56

Conread position: 1-285
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 15

Conread position: 1-286
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 104

Conread position: 1-287
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 1-287
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 250, 95

Conread position: 1-287
Cow position:
Alignm length: 306
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 15

Conread position: 1-287
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 113

Conread position: 1-288
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 65

Conread position: 1-289
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 129, 27

Conread position: 1-293
Cow position:
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 99

Conread position: 1-295
Cow position:
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 1-295
Cow position:
Alignm length: 307
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 18

Conread position: 1-349
Cow position:
Alignm length: 362
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 73

Conread position: 2-245
Cow position:
Alignm length: 253
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 39, 97

Conread position: 2-248
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 103

Conread position: 2-249
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 16, 67

Conread position: 2-281
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 112

Conread position: 2-288
Cow position:
Alignm length: 299
Alignm identity: 203
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 44, 15

Conread position: 3-237
Cow position:
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 100

Conread position: 3-247
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 65

Conread position: 3-249
Cow position:
Alignm length: 254
Alignm identity: 179
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 116, 23

Conread position: 3-249
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 116

Conread position: 3-281
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 98

Conread position: 3-287
Cow position:
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 90

Conread position: 3-287
Cow position:
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-232
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 101

Conread position: 4-249
Cow position:
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 50

Conread position: 4-281
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 102, 30

Conread position: 4-287
Cow position:
Alignm length: 299
Alignm identity: 215
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 77

Conread position: 4-287
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 45, 89

Conread position: 4-297
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 103

Conread position: 5-233
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 136, 43

Conread position: 5-236
Cow position:
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 89

Conread position: 5-287
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 96

Conread position: 6-246
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 27

Conread position: 9-241
Cow position:
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 160

Conread position: 10-287
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 80

Conread position: 11-287
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 86

Conread position: 14-247
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 16-234
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 77

Conread position: 16-287
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 32

Conread position: 17-221
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 99

Conread position: 22-261
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 23, 66

Conread position: 22-279
Cow position:
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 18, 94

Conread position: 26-287
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 108, 23

Conread position: 27-201
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 56

Conread position: 28-275
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 68

Conread position: 30-287
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 76, 0

Conread position: 31-267
Cow position:
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 36

Conread position: 36-287
Cow position:
Alignm length: 263
Alignm identity: 199
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 74, 39

Conread position: 44-267
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 5, 39

Conread position: 48-287
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 57, 46

Conread position: 49-211
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 54, 26

Conread position: 54-247
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 40, 56

Conread position: 54-284
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 37

Conread position: 54-287
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 83, 57

Conread position: 54-287
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 40

Conread position: 55-287
Cow position:
Alignm length: 240
Alignm identity: 179
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 76, 126

Conread position: 60-247
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 60-308
Cow position:
Alignm length: 255
Alignm identity: 169
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 50

Conread position: 64-247
Cow position:
Alignm length: 185
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 73, 52

Conread position: 64-247
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 41

Conread position: 64-295
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 42, 30

Conread position: 70-281
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 35, 24

Conread position: 75-352
Cow position:
Alignm length: 287
Alignm identity: 192
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 27

Conread position: 78-242
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 16

Conread position: 84-281
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 49, 60

Conread position: 96-247
Cow position:
Alignm length: 153
Alignm identity: 122
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 97-284
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 57

Conread position: 98-246
Cow position:
Alignm length: 150
Alignm identity: 124
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 7

Conread position: 101-300
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 16

Conread position: 102-281
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 54

Conread position: 102-287
Cow position:
Alignm length: 190
Alignm identity: 151
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 109-351
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 111-287
Cow position:
Alignm length: 183
Alignm identity: 146
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 76

Conread position: 119-249
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 112

Conread position: 122-284
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 50

Conread position: 129-232
Cow position:
Alignm length: 104
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 132-246
Cow position:
Alignm length: 115
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 136-287
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 115, 94

Conread position: 139-287
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 106, 12

Conread position: 144-287
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 107, 0

Conread position: 145-249
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 146-284
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 13

Conread position: 147-275
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 104, 66

Show alignments to all cow chromosomes.