Cow genome map
| Conread name: | rcmu12_j15.y1 |
| Conread position: | 1-162 |
| Cow position: | chr3:22171036-22171205 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-209 |
| Cow position: | chr3:36174220-36174002 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 45, 117 |
| Conread position: | 1-211 |
| Cow position: | chr3:31907291-31907076 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 1-221 |
| Cow position: | chr3:15685064-15684844 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 1-221 |
| Cow position: | chr3:44861454-44861234 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 1-228 |
| Cow position: | chr3:55777887-55778118 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 46, 209 |
| Conread position: | 1-229 |
| Cow position: | chr3:8790741-8790514 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 98 |
| Conread position: | 1-232 |
| Cow position: | chr3:62292269-62292037 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 111 |
| Conread position: | 1-233 |
| Cow position: | chr3:58865610-58865384 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 133, 56 |
| Conread position: | 1-235 |
| Cow position: | chr3:63237897-63237671 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-237 |
| Cow position: | chr3:3063595-3063818 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 91, 6 |
| Conread position: | 1-237 |
| Cow position: | chr3:4082245-4082007 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 1-237 |
| Cow position: | chr3:45691021-45690784 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 31, 140 |
| Conread position: | 1-237 |
| Cow position: | chr3:58350436-58350665 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 94 |
| Conread position: | 1-237 |
| Cow position: | chr3:71135642-71135880 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 1-237 |
| Cow position: | chr3:73956881-73957108 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 1-241 |
| Cow position: | chr3:8457508-8457752 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 1-246 |
| Cow position: | chr3:51255637-51255882 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 45, 112 |
| Conread position: | 1-247 |
| Cow position: | chr3:36204404-36204656 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 92 |
| Conread position: | 1-247 |
| Cow position: | chr3:50347816-50348057 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 1-247 |
| Cow position: | chr3:50614487-50614745 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 225 |
| Conread position: | 1-247 |
| Cow position: | chr3:58130854-58131094 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 132, 18 |
| Conread position: | 1-247 |
| Cow position: | chr3:61322695-61322944 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 97 |
| Conread position: | 1-249 |
| Cow position: | chr3:32597078-32596839 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 1-249 |
| Cow position: | chr3:55992019-55991763 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 114 |
| Conread position: | 1-249 |
| Cow position: | chr3:58286048-58285803 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 1-251 |
| Cow position: | chr3:82075208-82074956 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 1-259 |
| Cow position: | chr3:66708222-66707949 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 1-269 |
| Cow position: | chr3:59608357-59608630 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 1-273 |
| Cow position: | chr3:62884056-62884331 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 1-275 |
| Cow position: | chr3:74205960-74205672 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-280 |
| Cow position: | chr3:48629744-48629452 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 43, 109 |
| Conread position: | 1-281 |
| Cow position: | chr3:36100682-36100972 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 218 |
| Conread position: | 1-281 |
| Cow position: | chr3:50281908-50281610 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 37, 117 |
| Conread position: | 1-281 |
| Cow position: | chr3:52836050-52835738 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-281 |
| Cow position: | chr3:54862569-54862280 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 1-283 |
| Cow position: | chr3:77224968-77225256 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 1-284 |
| Cow position: | chr3:8752634-8752930 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 1-284 |
| Cow position: | chr3:23092129-23091833 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 43, 101 |
| Conread position: | 1-284 |
| Cow position: | chr3:65771460-65771191 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 1-285 |
| Cow position: | chr3:12255328-12255618 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 1-286 |
| Cow position: | chr3:70354383-70354091 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 1-287 |
| Cow position: | chr3:5420012-5419720 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 1-287 |
| Cow position: | chr3:23111649-23111366 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 250, 95 |
| Conread position: | 1-287 |
| Cow position: | chr3:51492631-51492932 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 15 |
| Conread position: | 1-287 |
| Cow position: | chr3:58174754-58175048 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 44, 113 |
| Conread position: | 1-288 |
| Cow position: | chr3:68342404-68342111 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 1-289 |
| Cow position: | chr3:54340560-54340278 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 129, 27 |
| Conread position: | 1-293 |
| Cow position: | chr3:8923897-8924196 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 1-295 |
| Cow position: | chr3:53588537-53588227 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 1-295 |
| Cow position: | chr3:61009584-61009291 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 1-349 |
| Cow position: | chr3:18458806-18458454 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 2-245 |
| Cow position: | chr3:23476852-23477092 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 2-248 |
| Cow position: | chr3:50462192-50462441 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 103 |
| Conread position: | 2-249 |
| Cow position: | chr3:1300083-1300321 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 2-281 |
| Cow position: | chr3:55373720-55373424 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 112 |
| Conread position: | 2-288 |
| Cow position: | chr3:20471511-20471217 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 3-237 |
| Cow position: | chr3:74561559-74561330 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 100 |
| Conread position: | 3-247 |
| Cow position: | chr3:15655296-15655042 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 65 |
| Conread position: | 3-249 |
| Cow position: | chr3:18216912-18216668 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 116, 23 |
| Conread position: | 3-249 |
| Cow position: | chr3:37451918-37452175 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 116 |
| Conread position: | 3-281 |
| Cow position: | chr3:25250760-25251047 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 43, 98 |
| Conread position: | 3-287 |
| Cow position: | chr3:20092663-20092377 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 90 |
| Conread position: | 3-287 |
| Cow position: | chr3:74611417-74611712 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 4-232 |
| Cow position: | chr3:55815707-55815931 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 14, 101 |
| Conread position: | 4-249 |
| Cow position: | chr3:51146809-51146566 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 4-281 |
| Cow position: | chr3:11920178-11919896 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 102, 30 |
| Conread position: | 4-287 |
| Cow position: | chr3:31933252-31932957 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 4-287 |
| Cow position: | chr3:42480474-42480762 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 45, 89 |
| Conread position: | 4-297 |
| Cow position: | chr3:3736141-3736458 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 5-233 |
| Cow position: | chr3:74035667-74035452 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 136, 43 |
| Conread position: | 5-236 |
| Cow position: | chr3:4223171-4223392 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 42, 89 |
| Conread position: | 5-287 |
| Cow position: | chr3:27532804-27532513 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 96 |
| Conread position: | 6-246 |
| Cow position: | chr3:46094690-46094924 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 9-241 |
| Cow position: | chr3:42563314-42563541 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 160 |
| Conread position: | 10-287 |
| Cow position: | chr3:42584403-42584686 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 80 |
| Conread position: | 11-287 |
| Cow position: | chr3:20158261-20158537 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 86 |
| Conread position: | 14-247 |
| Cow position: | chr3:61116995-61116749 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 16-234 |
| Cow position: | chr3:23496700-23496487 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 30, 77 |
| Conread position: | 16-287 |
| Cow position: | chr3:4329200-4329458 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 117, 32 |
| Conread position: | 17-221 |
| Cow position: | chr3:79376133-79376345 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 22-261 |
| Cow position: | chr3:53091360-53091605 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 22-279 |
| Cow position: | chr3:34675590-34675863 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 26-287 |
| Cow position: | chr3:39911175-39910911 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 108, 23 |
| Conread position: | 27-201 |
| Cow position: | chr3:37873348-37873516 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 56 |
| Conread position: | 28-275 |
| Cow position: | chr3:64319075-64319320 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 30-287 |
| Cow position: | chr3:58292008-58291744 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 31-267 |
| Cow position: | chr3:68262650-68262891 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 36-287 |
| Cow position: | chr3:15221629-15221370 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 44-267 |
| Cow position: | chr3:58632465-58632690 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 5, 39 |
| Conread position: | 48-287 |
| Cow position: | chr3:41718296-41718538 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 57, 46 |
| Conread position: | 49-211 |
| Cow position: | chr3:47680052-47679891 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 54-247 |
| Cow position: | chr3:26089095-26088893 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 54-284 |
| Cow position: | chr3:9074437-9074200 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 37 |
| Conread position: | 54-287 |
| Cow position: | chr3:14506007-14505766 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 54-287 |
| Cow position: | chr3:28238663-28238436 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 40 |
| Conread position: | 55-287 |
| Cow position: | chr3:9629794-9630029 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 76, 126 |
| Conread position: | 60-247 |
| Cow position: | chr3:18214228-18214032 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 60-308 |
| Cow position: | chr3:48271245-48271495 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 50 |
| Conread position: | 64-247 |
| Cow position: | chr3:58448143-58447962 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 73, 52 |
| Conread position: | 64-247 |
| Cow position: | chr3:73436524-73436337 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 69, 41 |
| Conread position: | 64-295 |
| Cow position: | chr3:41550459-41550221 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 42, 30 |
| Conread position: | 70-281 |
| Cow position: | chr3:24538798-24539015 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 35, 24 |
| Conread position: | 75-352 |
| Cow position: | chr3:61467263-61466985 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 78-242 |
| Cow position: | chr3:5601234-5601068 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 84-281 |
| Cow position: | chr3:6690191-6690393 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 96-247 |
| Cow position: | chr3:891216-891368 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 97-284 |
| Cow position: | chr3:61411076-61411266 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 57 |
| Conread position: | 98-246 |
| Cow position: | chr3:25090988-25091132 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 101-300 |
| Cow position: | chr3:24300314-24300514 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 16 |
| Conread position: | 102-281 |
| Cow position: | chr3:10431558-10431742 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 102-287 |
| Cow position: | chr3:22271497-22271308 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 151 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 109-351 |
| Cow position: | chr3:25076206-25075951 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 111-287 |
| Cow position: | chr3:22953916-22953737 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 119-249 |
| Cow position: | chr3:5844894-5845024 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 122-284 |
| Cow position: | chr3:54126278-54126114 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 50 |
| Conread position: | 129-232 |
| Cow position: | chr3:61116418-61116316 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 132-246 |
| Cow position: | chr3:31750260-31750371 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 136-287 |
| Cow position: | chr3:34315829-34315676 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 115, 94 |
| Conread position: | 139-287 |
| Cow position: | chr3:62628268-62628118 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 106, 12 |
| Conread position: | 144-287 |
| Cow position: | chr3:84112580-84112430 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 145-249 |
| Cow position: | chr3:74912855-74912959 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 146-284 |
| Cow position: | chr3:25027405-25027546 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 13 |
| Conread position: | 147-275 |
| Cow position: | chr3:22171381-22171510 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 66 |
Show alignments to all cow chromosomes.