Cow genome map
| Conread name: | rcmu12_j15.y1 |
| Conread position: | 1-127 |
| Cow position: | chr5:41229610-41229736 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 1-141 |
| Cow position: | chr5:37713999-37713851 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-167 |
| Cow position: | chr5:45940713-45940536 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-212 |
| Cow position: | chr5:36486390-36486612 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 146 |
| Conread position: | 1-221 |
| Cow position: | chr5:22934554-22934328 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 94 |
| Conread position: | 1-221 |
| Cow position: | chr5:72172926-72173145 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 116 |
| Conread position: | 1-222 |
| Cow position: | chr5:55989642-55989869 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 1-231 |
| Cow position: | chr5:72042122-72042342 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 1-234 |
| Cow position: | chr5:60747379-60747140 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 1-235 |
| Cow position: | chr5:36407057-36407293 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 109 |
| Conread position: | 1-237 |
| Cow position: | chr5:19905374-19905139 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 78 |
| Conread position: | 1-237 |
| Cow position: | chr5:24361432-24361656 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 1-237 |
| Cow position: | chr5:32282233-32282477 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 45, 105 |
| Conread position: | 1-238 |
| Cow position: | chr5:17869605-17869830 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 1-238 |
| Cow position: | chr5:26376461-26376689 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 1-239 |
| Cow position: | chr5:27007798-27008039 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 20 |
| Conread position: | 1-240 |
| Cow position: | chr5:34184122-34184370 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 32, 104 |
| Conread position: | 1-241 |
| Cow position: | chr5:3752760-3752999 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 1-241 |
| Cow position: | chr5:25919724-25919488 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 1-241 |
| Cow position: | chr5:48143888-48143641 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 52, 108 |
| Conread position: | 1-244 |
| Cow position: | chr5:22839573-22839329 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 1-245 |
| Cow position: | chr5:18553798-18554044 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 31, 103 |
| Conread position: | 1-245 |
| Cow position: | chr5:23366867-23366613 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 135 |
| Conread position: | 1-247 |
| Cow position: | chr5:23536077-23536334 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 131, 39 |
| Conread position: | 1-248 |
| Cow position: | chr5:14154046-14154302 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 41, 102 |
| Conread position: | 1-248 |
| Cow position: | chr5:41636769-41637019 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 1-249 |
| Cow position: | chr5:49567329-49567579 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 1-249 |
| Cow position: | chr5:51502911-51503159 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 13 |
| Conread position: | 1-255 |
| Cow position: | chr5:4927668-4927404 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 43, 100 |
| Conread position: | 1-267 |
| Cow position: | chr5:64398909-64399185 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 104 |
| Conread position: | 1-268 |
| Cow position: | chr5:30978262-30978527 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 18 |
| Conread position: | 1-281 |
| Cow position: | chr5:1343956-1343664 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 128 |
| Conread position: | 1-281 |
| Cow position: | chr5:13044495-13044219 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 45, 111 |
| Conread position: | 1-281 |
| Cow position: | chr5:25899972-25899683 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 1-284 |
| Cow position: | chr5:27411495-27411210 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 1-284 |
| Cow position: | chr5:30332839-30333146 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-284 |
| Cow position: | chr5:61488210-61487924 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 48, 100 |
| Conread position: | 1-284 |
| Cow position: | chr5:63188426-63188135 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 45, 16 |
| Conread position: | 1-287 |
| Cow position: | chr5:3649559-3649265 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 1-287 |
| Cow position: | chr5:27615413-27615711 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 168 |
| Conread position: | 1-287 |
| Cow position: | chr5:37068794-37069080 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 1-287 |
| Cow position: | chr5:39695552-39695850 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 1-287 |
| Cow position: | chr5:40711543-40711248 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 1-287 |
| Cow position: | chr5:41598802-41598513 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 1-288 |
| Cow position: | chr5:4631022-4631296 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 45, 22 |
| Conread position: | 1-292 |
| Cow position: | chr5:58748665-58748972 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-297 |
| Cow position: | chr5:58320567-58320262 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 1-347 |
| Cow position: | chr5:33265555-33265219 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 1-353 |
| Cow position: | chr5:38629188-38629549 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 295 |
| Conread position: | 2-221 |
| Cow position: | chr5:21535215-21534983 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 42, 98 |
| Conread position: | 2-231 |
| Cow position: | chr5:35209575-35209337 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 2-232 |
| Cow position: | chr5:6896227-6895988 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 99 |
| Conread position: | 2-236 |
| Cow position: | chr5:69773468-69773688 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 44, 62 |
| Conread position: | 2-247 |
| Cow position: | chr5:47681102-47680864 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 2-247 |
| Cow position: | chr5:48757846-48758094 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 128, 27 |
| Conread position: | 2-249 |
| Cow position: | chr5:48535711-48535944 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 131, 37 |
| Conread position: | 2-249 |
| Cow position: | chr5:54089942-54090193 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 2-266 |
| Cow position: | chr5:7552519-7552243 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 2-286 |
| Cow position: | chr5:3442357-3442641 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 46 |
| Conread position: | 2-292 |
| Cow position: | chr5:17027997-17028300 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 3-177 |
| Cow position: | chr5:39182010-39181833 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 97 |
| Conread position: | 4-281 |
| Cow position: | chr5:50425575-50425295 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 8, 48 |
| Conread position: | 4-284 |
| Cow position: | chr5:39442198-39442492 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 4-284 |
| Cow position: | chr5:56385131-56385409 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 129, 46 |
| Conread position: | 4-284 |
| Cow position: | chr5:59303371-59303096 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 5-237 |
| Cow position: | chr5:18104243-18104004 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 233 |
| Conread position: | 6-284 |
| Cow position: | chr5:31561437-31561720 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 40, 95 |
| Conread position: | 9-232 |
| Cow position: | chr5:26046241-26046461 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 44, 40 |
| Conread position: | 9-287 |
| Cow position: | chr5:23529370-23529084 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 10-247 |
| Cow position: | chr5:59449666-59449419 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 33, 107 |
| Conread position: | 11-247 |
| Cow position: | chr5:41604542-41604777 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 95, 8 |
| Conread position: | 11-292 |
| Cow position: | chr5:40234039-40234315 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 12-249 |
| Cow position: | chr5:73526288-73526522 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 29, 89 |
| Conread position: | 14-280 |
| Cow position: | chr5:17267983-17267702 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 30, 90 |
| Conread position: | 19-281 |
| Cow position: | chr5:68082054-68081788 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 21-281 |
| Cow position: | chr5:49945830-49946098 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 24-245 |
| Cow position: | chr5:73556270-73556045 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 31-234 |
| Cow position: | chr5:41945781-41945990 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 36-240 |
| Cow position: | chr5:1688175-1687968 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 39-295 |
| Cow position: | chr5:18695121-18695360 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 147, 55 |
| Conread position: | 44-267 |
| Cow position: | chr5:34279653-34279429 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 89, 50 |
| Conread position: | 44-350 |
| Cow position: | chr5:67150064-67149758 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 5, 51 |
| Conread position: | 48-220 |
| Cow position: | chr5:2267210-2267374 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 48-285 |
| Cow position: | chr5:47836498-47836746 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 52-284 |
| Cow position: | chr5:45396455-45396217 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 57-247 |
| Cow position: | chr5:36487735-36487541 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 76, 39 |
| Conread position: | 61-252 |
| Cow position: | chr5:49656057-49655869 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 63-287 |
| Cow position: | chr5:21195147-21194924 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 77-343 |
| Cow position: | chr5:21531120-21530857 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 81-284 |
| Cow position: | chr5:58343841-58344054 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 96-245 |
| Cow position: | chr5:63328895-63328742 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 146 |
| Conread position: | 98-249 |
| Cow position: | chr5:54532990-54533140 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 106-249 |
| Cow position: | chr5:23641002-23640861 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 11 |
| Conread position: | 106-287 |
| Cow position: | chr5:3058931-3059116 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 27, 163 |
| Conread position: | 108-275 |
| Cow position: | chr5:41605792-41605630 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 153, 22 |
| Conread position: | 121-246 |
| Cow position: | chr5:2819284-2819411 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 122-284 |
| Cow position: | chr5:36028121-36027954 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 54 |
| Conread position: | 124-249 |
| Cow position: | chr5:3225946-3225824 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 124-287 |
| Cow position: | chr5:38936560-38936396 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 9, 85 |
| Conread position: | 132-248 |
| Cow position: | chr5:45558958-45559078 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 132-273 |
| Cow position: | chr5:21356851-21356706 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 133-249 |
| Cow position: | chr5:41907069-41907185 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-281 |
| Cow position: | chr5:38621459-38621598 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 143-287 |
| Cow position: | chr5:27293620-27293471 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 144-325 |
| Cow position: | chr5:17097762-17097945 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 107, 69 |
| Conread position: | 148-247 |
| Cow position: | chr5:75687270-75687172 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 165-287 |
| Cow position: | chr5:48067770-48067897 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.