Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-197
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 96

Conread position: 1-203
Cow position:
Alignm length: 213
Alignm identity: 167
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 41, 117

Conread position: 1-232
Cow position:
Alignm length: 239
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 96

Conread position: 1-233
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 26

Conread position: 1-233
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 15

Conread position: 1-235
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 45, 99

Conread position: 1-235
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 48, 10

Conread position: 1-237
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 56

Conread position: 1-237
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 94

Conread position: 1-237
Cow position:
Alignm length: 262
Alignm identity: 190
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 30, 108

Conread position: 1-240
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 45, 102

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 93

Conread position: 1-247
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 85, 17

Conread position: 1-247
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 24

Conread position: 1-247
Cow position:
Alignm length: 264
Alignm identity: 190
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 18

Conread position: 1-247
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 18

Conread position: 1-247
Cow position:
Alignm length: 257
Alignm identity: 193
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 48, 18

Conread position: 1-249
Cow position:
Alignm length: 259
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 14

Conread position: 1-249
Cow position:
Alignm length: 257
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 98

Conread position: 1-249
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 16

Conread position: 1-258
Cow position:
Alignm length: 269
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 102

Conread position: 1-261
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 44, 98

Conread position: 1-275
Cow position:
Alignm length: 294
Alignm identity: 211
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 10, 105

Conread position: 1-275
Cow position:
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 1-284
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 55

Conread position: 1-284
Cow position:
Alignm length: 307
Alignm identity: 214
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 15, 122

Conread position: 1-284
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 52, 16

Conread position: 1-287
Cow position:
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 113

Conread position: 1-287
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 0

Conread position: 1-287
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 15

Conread position: 1-287
Cow position:
Alignm length: 305
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 24

Conread position: 1-287
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 132, 47

Conread position: 1-287
Cow position:
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 101

Conread position: 1-287
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 88

Conread position: 1-288
Cow position:
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 270

Conread position: 1-288
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 132, 25

Conread position: 1-290
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 100

Conread position: 1-292
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 117

Conread position: 1-346
Cow position:
Alignm length: 359
Alignm identity: 239
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 212

Conread position: 2-222
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 24

Conread position: 2-229
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 165

Conread position: 2-232
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 15, 99

Conread position: 2-245
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 44, 99

Conread position: 2-249
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 34, 183

Conread position: 2-249
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 44, 115

Conread position: 2-252
Cow position:
Alignm length: 261
Alignm identity: 175
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 108

Conread position: 2-281
Cow position:
Alignm length: 292
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 88

Conread position: 2-287
Cow position:
Alignm length: 303
Alignm identity: 224
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 8

Conread position: 2-287
Cow position:
Alignm length: 296
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 129, 81

Conread position: 2-303
Cow position:
Alignm length: 314
Alignm identity: 225
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 47, 25

Conread position: 2-343
Cow position:
Alignm length: 355
Alignm identity: 255
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 213

Conread position: 4-162
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 96

Conread position: 4-233
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 15

Conread position: 4-234
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 52, 22

Conread position: 4-239
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 11, 151

Conread position: 4-240
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 93

Conread position: 4-247
Cow position:
Alignm length: 250
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 133

Conread position: 4-247
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 128, 22

Conread position: 4-249
Cow position:
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 86, 30

Conread position: 4-284
Cow position:
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 97

Conread position: 5-167
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 89

Conread position: 5-249
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 92

Conread position: 5-249
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 66, 48

Conread position: 5-249
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 42, 104

Conread position: 5-249
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 128, 52

Conread position: 6-249
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 107

Conread position: 6-284
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 19, 30

Conread position: 9-247
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 38, 89

Conread position: 9-248
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 38, 62

Conread position: 10-241
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 163

Conread position: 10-249
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 36, 98

Conread position: 10-287
Cow position:
Alignm length: 291
Alignm identity: 214
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 160

Conread position: 18-199
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 18-243
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 29, 94

Conread position: 19-247
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 27, 89

Conread position: 19-275
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 27, 82

Conread position: 19-287
Cow position:
Alignm length: 280
Alignm identity: 205
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 27, 156

Conread position: 22-344
Cow position:
Alignm length: 343
Alignm identity: 235
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 31, 27

Conread position: 31-245
Cow position:
Alignm length: 223
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 31-247
Cow position:
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 65

Conread position: 31-249
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 65

Conread position: 31-291
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 7

Conread position: 36-211
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 89

Conread position: 48-233
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 45

Conread position: 51-284
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 5, 44

Conread position: 55-305
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 27

Conread position: 57-249
Cow position:
Alignm length: 194
Alignm identity: 152
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 77, 157

Conread position: 57-280
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 37

Conread position: 59-249
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 68, 33

Conread position: 70-219
Cow position:
Alignm length: 152
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 88-275
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 17

Conread position: 91-284
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 42, 13

Conread position: 96-247
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 114

Conread position: 96-281
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 85

Conread position: 97-248
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 94

Conread position: 97-287
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 12

Conread position: 99-281
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 162, 38

Conread position: 102-340
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 187

Conread position: 107-287
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 92

Conread position: 116-285
Cow position:
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 109

Conread position: 118-233
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 108

Conread position: 131-247
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 100

Conread position: 148-284
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 105, 60

Conread position: 148-325
Cow position:
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 142

Conread position: 152-287
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 0

Show alignments to all cow chromosomes.