Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-175
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 29

Conread position: 1-177
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 15

Conread position: 1-200
Cow position:
Alignm length: 205
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 21

Conread position: 1-201
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 1-208
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 21, 97

Conread position: 1-211
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 1-211
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 100

Conread position: 1-219
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 46, 99

Conread position: 1-221
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 45, 96

Conread position: 1-235
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 99

Conread position: 1-235
Cow position:
Alignm length: 239
Alignm identity: 169
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 59

Conread position: 1-235
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 20

Conread position: 1-237
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 94

Conread position: 1-237
Cow position:
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 109

Conread position: 1-239
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 132, 18

Conread position: 1-240
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 104

Conread position: 1-240
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 39

Conread position: 1-243
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 63

Conread position: 1-244
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 42, 179

Conread position: 1-245
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 116

Conread position: 1-245
Cow position:
Alignm length: 260
Alignm identity: 179
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 109

Conread position: 1-245
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 45, 168

Conread position: 1-246
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 133, 30

Conread position: 1-246
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 100

Conread position: 1-247
Cow position:
Alignm length: 255
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 43, 16

Conread position: 1-247
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 62, 26

Conread position: 1-247
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 211

Conread position: 1-248
Cow position:
Alignm length: 254
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 9

Conread position: 1-249
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 16, 107

Conread position: 1-250
Cow position:
Alignm length: 258
Alignm identity: 188
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 15

Conread position: 1-273
Cow position:
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 1-273
Cow position:
Alignm length: 284
Alignm identity: 189
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 95

Conread position: 1-275
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 81

Conread position: 1-275
Cow position:
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 34

Conread position: 1-281
Cow position:
Alignm length: 298
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 105

Conread position: 1-284
Cow position:
Alignm length: 296
Alignm identity: 219
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 18

Conread position: 1-284
Cow position:
Alignm length: 292
Alignm identity: 201
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 46, 257

Conread position: 1-284
Cow position:
Alignm length: 296
Alignm identity: 218
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 43, 99

Conread position: 1-284
Cow position:
Alignm length: 299
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 91

Conread position: 1-284
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 44, 225

Conread position: 1-284
Cow position:
Alignm length: 303
Alignm identity: 203
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 99

Conread position: 1-284
Cow position:
Alignm length: 299
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 15

Conread position: 1-285
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 99

Conread position: 1-287
Cow position:
Alignm length: 292
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 94

Conread position: 1-287
Cow position:
Alignm length: 300
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 114

Conread position: 1-287
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 89

Conread position: 1-297
Cow position:
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 18

Conread position: 1-352
Cow position:
Alignm length: 364
Alignm identity: 232
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 93

Conread position: 1-353
Cow position:
Alignm length: 360
Alignm identity: 249
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 132, 48

Conread position: 1-353
Cow position:
Alignm length: 368
Alignm identity: 255
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 18

Conread position: 2-203
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 100

Conread position: 2-206
Cow position:
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 111

Conread position: 2-235
Cow position:
Alignm length: 244
Alignm identity: 187
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 38, 19

Conread position: 2-237
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 99

Conread position: 2-238
Cow position:
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 98

Conread position: 2-249
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 99

Conread position: 2-281
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 213

Conread position: 2-281
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 47, 84

Conread position: 2-284
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 43, 275

Conread position: 2-284
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 23

Conread position: 2-287
Cow position:
Alignm length: 298
Alignm identity: 207
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 30, 14

Conread position: 2-287
Cow position:
Alignm length: 303
Alignm identity: 198
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 2-293
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 234, 57

Conread position: 3-237
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 99

Conread position: 3-247
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 29, 225

Conread position: 3-247
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 123

Conread position: 3-251
Cow position:
Alignm length: 262
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 102

Conread position: 4-223
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 99

Conread position: 4-242
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 128, 41

Conread position: 4-284
Cow position:
Alignm length: 291
Alignm identity: 215
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 102, 45

Conread position: 4-284
Cow position:
Alignm length: 305
Alignm identity: 221
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 101

Conread position: 5-241
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 108

Conread position: 5-281
Cow position:
Alignm length: 289
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 83

Conread position: 5-285
Cow position:
Alignm length: 307
Alignm identity: 207
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 155

Conread position: 6-211
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 100

Conread position: 10-175
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 88

Conread position: 10-284
Cow position:
Alignm length: 288
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 18, 91

Conread position: 11-175
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 14

Conread position: 11-284
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 35, 0

Conread position: 12-247
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 91

Conread position: 13-237
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 170

Conread position: 27-249
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 18, 74

Conread position: 31-284
Cow position:
Alignm length: 268
Alignm identity: 197
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 14, 65

Conread position: 40-288
Cow position:
Alignm length: 258
Alignm identity: 192
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 9, 54

Conread position: 48-213
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 62

Conread position: 48-284
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 62

Conread position: 48-287
Cow position:
Alignm length: 246
Alignm identity: 187
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 85, 166

Conread position: 48-294
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 56, 25

Conread position: 50-249
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 159

Conread position: 54-287
Cow position:
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 88

Conread position: 58-249
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 5, 11

Conread position: 61-281
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 72, 31

Conread position: 62-233
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 153

Conread position: 64-246
Cow position:
Alignm length: 183
Alignm identity: 146
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 97-287
Cow position:
Alignm length: 198
Alignm identity: 158
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 36, 0

Conread position: 97-291
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 102-273
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 25, 36

Conread position: 102-287
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 31, 169

Conread position: 102-287
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 96

Conread position: 105-249
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 115

Conread position: 109-284
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 104

Conread position: 114-247
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 62

Conread position: 116-248
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 119-281
Cow position:
Alignm length: 170
Alignm identity: 134
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 14, 29

Conread position: 131-247
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 144-247
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 144-288
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 64

Conread position: 150-283
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 152-287
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 158-284
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 165-287
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 77, 0

Show alignments to all cow chromosomes.