Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-188
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 16, 158

Conread position: 1-192
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 101

Conread position: 1-194
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 46, 22

Conread position: 1-196
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 144

Conread position: 1-208
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 55, 116

Conread position: 1-209
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 40, 100

Conread position: 1-212
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 45, 94

Conread position: 1-212
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 99

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 93

Conread position: 1-219
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 15

Conread position: 1-221
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 15

Conread position: 1-221
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 15

Conread position: 1-221
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 89

Conread position: 1-232
Cow position:
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 21

Conread position: 1-235
Cow position:
Alignm length: 240
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 161

Conread position: 1-237
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 77

Conread position: 1-239
Cow position:
Alignm length: 246
Alignm identity: 162
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 105

Conread position: 1-245
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 123

Conread position: 1-247
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 13, 103

Conread position: 1-247
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 43, 111

Conread position: 1-247
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 103, 48

Conread position: 1-247
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 42, 83

Conread position: 1-247
Cow position:
Alignm length: 261
Alignm identity: 199
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 15, 106

Conread position: 1-248
Cow position:
Alignm length: 257
Alignm identity: 190
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 52, 48

Conread position: 1-248
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 94

Conread position: 1-249
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 237

Conread position: 1-249
Cow position:
Alignm length: 254
Alignm identity: 180
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 71

Conread position: 1-249
Cow position:
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 83

Conread position: 1-249
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 28

Conread position: 1-256
Cow position:
Alignm length: 260
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 95

Conread position: 1-259
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 74

Conread position: 1-273
Cow position:
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 102

Conread position: 1-275
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 117

Conread position: 1-275
Cow position:
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 72

Conread position: 1-275
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 104

Conread position: 1-275
Cow position:
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 119

Conread position: 1-275
Cow position:
Alignm length: 285
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 77

Conread position: 1-281
Cow position:
Alignm length: 298
Alignm identity: 202
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 87

Conread position: 1-281
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 26

Conread position: 1-281
Cow position:
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 80

Conread position: 1-281
Cow position:
Alignm length: 289
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 62, 88

Conread position: 1-282
Cow position:
Alignm length: 291
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 221

Conread position: 1-284
Cow position:
Alignm length: 305
Alignm identity: 222
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 41, 109

Conread position: 1-284
Cow position:
Alignm length: 291
Alignm identity: 211
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 49, 25

Conread position: 1-284
Cow position:
Alignm length: 304
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 51, 200

Conread position: 1-284
Cow position:
Alignm length: 299
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 1-287
Cow position:
Alignm length: 295
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 215

Conread position: 1-287
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 1-287
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 138

Conread position: 1-290
Cow position:
Alignm length: 305
Alignm identity: 206
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 18

Conread position: 1-295
Cow position:
Alignm length: 308
Alignm identity: 202
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 46, 27

Conread position: 1-295
Cow position:
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 102

Conread position: 1-321
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 43, 72

Conread position: 1-343
Cow position:
Alignm length: 356
Alignm identity: 245
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 48, 27

Conread position: 1-346
Cow position:
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 187

Conread position: 2-221
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 127

Conread position: 2-247
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 55, 213

Conread position: 2-287
Cow position:
Alignm length: 299
Alignm identity: 202
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 24

Conread position: 3-235
Cow position:
Alignm length: 235
Alignm identity: 165
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 43, 72

Conread position: 3-249
Cow position:
Alignm length: 255
Alignm identity: 188
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 42, 203

Conread position: 3-297
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 41, 14

Conread position: 4-237
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 81

Conread position: 4-237
Cow position:
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 60

Conread position: 4-237
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 13

Conread position: 4-247
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 129, 45

Conread position: 4-273
Cow position:
Alignm length: 284
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 97

Conread position: 5-247
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 41, 125

Conread position: 5-247
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 49

Conread position: 5-268
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 41, 18

Conread position: 5-281
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 91

Conread position: 5-291
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 94

Conread position: 5-292
Cow position:
Alignm length: 298
Alignm identity: 208
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 39, 79

Conread position: 6-278
Cow position:
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 96

Conread position: 7-284
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 98

Conread position: 10-201
Cow position:
Alignm length: 205
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 91

Conread position: 10-281
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 55

Conread position: 10-287
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 43, 164

Conread position: 12-286
Cow position:
Alignm length: 292
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 7

Conread position: 12-297
Cow position:
Alignm length: 311
Alignm identity: 224
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 77, 302

Conread position: 14-249
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 119, 11

Conread position: 15-287
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 97

Conread position: 19-353
Cow position:
Alignm length: 354
Alignm identity: 240
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 80

Conread position: 26-219
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 73

Conread position: 27-294
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 19, 73

Conread position: 31-249
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 75, 66

Conread position: 31-280
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 36

Conread position: 33-220
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 100, 61

Conread position: 34-281
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 16

Conread position: 35-211
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 60

Conread position: 36-210
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 11, 60

Conread position: 38-245
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 58

Conread position: 38-285
Cow position:
Alignm length: 258
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 92, 138

Conread position: 48-232
Cow position:
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 16

Conread position: 48-249
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 53

Conread position: 55-287
Cow position:
Alignm length: 237
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 42

Conread position: 55-305
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 27

Conread position: 59-302
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 33

Conread position: 59-306
Cow position:
Alignm length: 254
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 35

Conread position: 63-248
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 70, 33

Conread position: 68-343
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 31

Conread position: 74-287
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 20

Conread position: 75-293
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 55, 19

Conread position: 88-246
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 14

Conread position: 96-281
Cow position:
Alignm length: 191
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 155, 74

Conread position: 109-249
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 77

Conread position: 116-287
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 135, 7

Conread position: 117-284
Cow position:
Alignm length: 174
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 60

Conread position: 117-287
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 16, 58

Conread position: 120-287
Cow position:
Alignm length: 169
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 138, 131

Conread position: 132-249
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 47, 56

Conread position: 141-287
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 120, 112

Conread position: 148-247
Cow position:
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 165-295
Cow position:
Alignm length: 136
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 86, 129

Show alignments to all cow chromosomes.