Cow genome map

Conread name: rcmu12_j15.y1

Conread position: 1-130
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 88

Conread position: 1-151
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 1-151
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 1-155
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 96

Conread position: 1-163
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 79

Conread position: 1-203
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 1-204
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 14

Conread position: 1-209
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 118

Conread position: 1-217
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 15

Conread position: 1-220
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 1-232
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 42, 98

Conread position: 1-232
Cow position:
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 108

Conread position: 1-232
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 222

Conread position: 1-234
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 117

Conread position: 1-234
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 87

Conread position: 1-235
Cow position:
Alignm length: 243
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 111

Conread position: 1-237
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 58

Conread position: 1-238
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 52, 102

Conread position: 1-240
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 61

Conread position: 1-240
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 46, 87

Conread position: 1-242
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 79

Conread position: 1-245
Cow position:
Alignm length: 255
Alignm identity: 194
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 69

Conread position: 1-245
Cow position:
Alignm length: 251
Alignm identity: 171
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 94

Conread position: 1-246
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 213

Conread position: 1-246
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 99

Conread position: 1-247
Cow position:
Alignm length: 257
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 24

Conread position: 1-247
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 94

Conread position: 1-247
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 26

Conread position: 1-247
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 36

Conread position: 1-247
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 101

Conread position: 1-247
Cow position:
Alignm length: 258
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 130

Conread position: 1-247
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 98

Conread position: 1-247
Cow position:
Alignm length: 248
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 129, 18

Conread position: 1-249
Cow position:
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 15

Conread position: 1-249
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 20

Conread position: 1-249
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 100

Conread position: 1-281
Cow position:
Alignm length: 294
Alignm identity: 215
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 27

Conread position: 1-281
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 16, 92

Conread position: 1-281
Cow position:
Alignm length: 300
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 214

Conread position: 1-284
Cow position:
Alignm length: 296
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 18

Conread position: 1-284
Cow position:
Alignm length: 289
Alignm identity: 207
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 97

Conread position: 1-284
Cow position:
Alignm length: 296
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 98

Conread position: 1-287
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 15

Conread position: 1-287
Cow position:
Alignm length: 302
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 31, 84

Conread position: 1-287
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 257

Conread position: 1-287
Cow position:
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 102

Conread position: 1-287
Cow position:
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 28

Conread position: 1-287
Cow position:
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 98

Conread position: 1-288
Cow position:
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 100

Conread position: 1-304
Cow position:
Alignm length: 325
Alignm identity: 226
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 118

Conread position: 1-347
Cow position:
Alignm length: 360
Alignm identity: 234
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 99

Conread position: 1-348
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 98

Conread position: 2-163
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 99

Conread position: 2-247
Cow position:
Alignm length: 254
Alignm identity: 176
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 94

Conread position: 2-247
Cow position:
Alignm length: 259
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 116

Conread position: 2-247
Cow position:
Alignm length: 256
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 129

Conread position: 2-247
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 90

Conread position: 2-272
Cow position:
Alignm length: 280
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 17

Conread position: 2-284
Cow position:
Alignm length: 291
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 17

Conread position: 2-288
Cow position:
Alignm length: 299
Alignm identity: 196
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 95

Conread position: 4-211
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 15

Conread position: 4-211
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 36

Conread position: 4-247
Cow position:
Alignm length: 255
Alignm identity: 196
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 47, 99

Conread position: 4-256
Cow position:
Alignm length: 268
Alignm identity: 202
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 42, 221

Conread position: 4-287
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 80

Conread position: 5-221
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 96

Conread position: 5-287
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 97

Conread position: 6-223
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 124, 42

Conread position: 6-287
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 48

Conread position: 7-245
Cow position:
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 231

Conread position: 8-253
Cow position:
Alignm length: 261
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 23

Conread position: 8-268
Cow position:
Alignm length: 273
Alignm identity: 197
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 9-232
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 78

Conread position: 9-247
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 9-287
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 102

Conread position: 11-247
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 92

Conread position: 12-304
Cow position:
Alignm length: 306
Alignm identity: 206
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 32, 92

Conread position: 13-220
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 32, 6

Conread position: 17-249
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 16, 215

Conread position: 21-232
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 82

Conread position: 22-211
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 43

Conread position: 22-245
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 42

Conread position: 22-249
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 26

Conread position: 23-284
Cow position:
Alignm length: 275
Alignm identity: 199
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 22, 182

Conread position: 23-287
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 26

Conread position: 31-249
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 138

Conread position: 31-287
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 8, 64

Conread position: 34-288
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 46

Conread position: 36-247
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 72

Conread position: 36-281
Cow position:
Alignm length: 254
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 97, 60

Conread position: 40-249
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 69

Conread position: 48-287
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 85, 33

Conread position: 48-289
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 46

Conread position: 57-249
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 76, 174

Conread position: 59-284
Cow position:
Alignm length: 236
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 96

Conread position: 62-249
Cow position:
Alignm length: 191
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 37, 171

Conread position: 78-275
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 55, 24

Conread position: 83-345
Cow position:
Alignm length: 264
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 11

Conread position: 96-249
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 15

Conread position: 96-284
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 13

Conread position: 102-272
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 102-282
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 7

Conread position: 110-273
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 133-275
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 0

Conread position: 141-287
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 110, 89

Conread position: 143-247
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 145-247
Cow position:
Alignm length: 103
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 147-287
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 0

Conread position: 148-247
Cow position:
Alignm length: 100
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 148-284
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 48

Conread position: 154-287
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 30

Conread position: 155-287
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 96, 0

Show alignments to all cow chromosomes.