Cow genome map
| Conread name: | rcmu12_j15.y1 |
| Conread position: | 1-130 |
| Cow position: | chrX:34994033-34994162 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 88 |
| Conread position: | 1-151 |
| Cow position: | chrX:8913820-8913977 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-151 |
| Cow position: | chrX:8915564-8915721 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-155 |
| Cow position: | chrX:18417689-18417532 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 96 |
| Conread position: | 1-163 |
| Cow position: | chrX:46029084-46028917 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 1-203 |
| Cow position: | chrX:3154344-3154132 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-204 |
| Cow position: | chrX:39546073-39545867 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 1-209 |
| Cow position: | chrX:40642886-40643095 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 1-217 |
| Cow position: | chrX:9161485-9161700 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 1-220 |
| Cow position: | chrX:28111406-28111637 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-232 |
| Cow position: | chrX:17964619-17964382 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 42, 98 |
| Conread position: | 1-232 |
| Cow position: | chrX:28580126-28580360 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 108 |
| Conread position: | 1-232 |
| Cow position: | chrX:29032309-29032548 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 45, 222 |
| Conread position: | 1-234 |
| Cow position: | chrX:30162896-30163147 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 117 |
| Conread position: | 1-234 |
| Cow position: | chrX:31340608-31340852 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 1-235 |
| Cow position: | chrX:25193560-25193800 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 111 |
| Conread position: | 1-237 |
| Cow position: | chrX:17743964-17744201 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 58 |
| Conread position: | 1-238 |
| Cow position: | chrX:11562056-11562292 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 52, 102 |
| Conread position: | 1-240 |
| Cow position: | chrX:582954-583183 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 61 |
| Conread position: | 1-240 |
| Cow position: | chrX:16284045-16283795 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 1-242 |
| Cow position: | chrX:41070837-41071079 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 45, 79 |
| Conread position: | 1-245 |
| Cow position: | chrX:27176412-27176161 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 43, 69 |
| Conread position: | 1-245 |
| Cow position: | chrX:36010007-36009760 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 29, 94 |
| Conread position: | 1-246 |
| Cow position: | chrX:7497143-7497391 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 213 |
| Conread position: | 1-246 |
| Cow position: | chrX:18142555-18142301 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 45, 99 |
| Conread position: | 1-247 |
| Cow position: | chrX:630406-630155 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 1-247 |
| Cow position: | chrX:6041313-6041054 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 1-247 |
| Cow position: | chrX:15305387-15305141 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 109, 26 |
| Conread position: | 1-247 |
| Cow position: | chrX:17541864-17542114 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 1-247 |
| Cow position: | chrX:25338083-25338342 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 44, 101 |
| Conread position: | 1-247 |
| Cow position: | chrX:28929740-28929990 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 130 |
| Conread position: | 1-247 |
| Cow position: | chrX:39415467-39415214 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 98 |
| Conread position: | 1-247 |
| Cow position: | chrX:41560344-41560116 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 1-249 |
| Cow position: | chrX:1978415-1978664 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 15 |
| Conread position: | 1-249 |
| Cow position: | chrX:6656286-6656539 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 1-249 |
| Cow position: | chrX:17042592-17042839 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 1-281 |
| Cow position: | chrX:7425369-7425659 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 1-281 |
| Cow position: | chrX:11746745-11747024 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 1-281 |
| Cow position: | chrX:18456296-18456594 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 214 |
| Conread position: | 1-284 |
| Cow position: | chrX:8917752-8918030 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 1-284 |
| Cow position: | chrX:25388333-25388055 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 55, 97 |
| Conread position: | 1-284 |
| Cow position: | chrX:27287834-27287542 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 1-287 |
| Cow position: | chrX:10302238-10302537 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 1-287 |
| Cow position: | chrX:25713697-25713995 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 1-287 |
| Cow position: | chrX:32431524-32431819 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 257 |
| Conread position: | 1-287 |
| Cow position: | chrX:33803109-33802808 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 102 |
| Conread position: | 1-287 |
| Cow position: | chrX:40789109-40789403 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 1-287 |
| Cow position: | chrX:47178056-47178342 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 98 |
| Conread position: | 1-288 |
| Cow position: | chrX:6563420-6563718 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 100 |
| Conread position: | 1-304 |
| Cow position: | chrX:20376865-20377181 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 118 |
| Conread position: | 1-347 |
| Cow position: | chrX:13382229-13382575 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 99 |
| Conread position: | 1-348 |
| Cow position: | chrX:16514363-16514015 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 98 |
| Conread position: | 2-163 |
| Cow position: | chrX:25232491-25232659 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 99 |
| Conread position: | 2-247 |
| Cow position: | chrX:2300828-2301079 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 2-247 |
| Cow position: | chrX:21664822-21664566 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 116 |
| Conread position: | 2-247 |
| Cow position: | chrX:23667023-23667274 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 129 |
| Conread position: | 2-247 |
| Cow position: | chrX:26619202-26618963 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 90 |
| Conread position: | 2-272 |
| Cow position: | chrX:26940595-26940333 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 2-284 |
| Cow position: | chrX:36840777-36841057 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 44, 17 |
| Conread position: | 2-288 |
| Cow position: | chrX:48248726-48249022 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 4-211 |
| Cow position: | chrX:11313875-11313666 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 4-211 |
| Cow position: | chrX:20011318-20011526 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 4-247 |
| Cow position: | chrX:28787255-28787501 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 47, 99 |
| Conread position: | 4-256 |
| Cow position: | chrX:25419255-25418990 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 42, 221 |
| Conread position: | 4-287 |
| Cow position: | chrX:15329553-15329842 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 80 |
| Conread position: | 5-221 |
| Cow position: | chrX:24132247-24132022 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 5-287 |
| Cow position: | chrX:19678363-19678080 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 97 |
| Conread position: | 6-223 |
| Cow position: | chrX:9041332-9041113 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 124, 42 |
| Conread position: | 6-287 |
| Cow position: | chrX:5046999-5046714 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 5, 48 |
| Conread position: | 7-245 |
| Cow position: | chrX:32743440-32743685 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 231 |
| Conread position: | 8-253 |
| Cow position: | chrX:25571089-25570831 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 23 |
| Conread position: | 8-268 |
| Cow position: | chrX:47743996-47744268 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 9-232 |
| Cow position: | chrX:12725645-12725868 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 9-247 |
| Cow position: | chrX:29761782-29761529 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 9-287 |
| Cow position: | chrX:22326030-22326314 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 11-247 |
| Cow position: | chrX:27771666-27771423 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 12-304 |
| Cow position: | chrX:2786648-2786350 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 13-220 |
| Cow position: | chrX:7344999-7345211 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 32, 6 |
| Conread position: | 17-249 |
| Cow position: | chrX:9539245-9539478 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 16, 215 |
| Conread position: | 21-232 |
| Cow position: | chrX:39097439-39097649 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 82 |
| Conread position: | 22-211 |
| Cow position: | chrX:17635064-17635250 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 43 |
| Conread position: | 22-245 |
| Cow position: | chrX:6203470-6203694 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 42 |
| Conread position: | 22-249 |
| Cow position: | chrX:6367842-6367620 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 108, 26 |
| Conread position: | 23-284 |
| Cow position: | chrX:23414446-23414179 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 22, 182 |
| Conread position: | 23-287 |
| Cow position: | chrX:18287150-18286883 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 31-249 |
| Cow position: | chrX:3161100-3160890 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 138 |
| Conread position: | 31-287 |
| Cow position: | chrX:34356032-34355776 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 8, 64 |
| Conread position: | 34-288 |
| Cow position: | chrX:37760823-37761067 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 36-247 |
| Cow position: | chrX:15049434-15049642 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 55, 72 |
| Conread position: | 36-281 |
| Cow position: | chrX:38999796-39000042 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 40-249 |
| Cow position: | chrX:31602601-31602814 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 69 |
| Conread position: | 48-287 |
| Cow position: | chrX:46083925-46084172 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 85, 33 |
| Conread position: | 48-289 |
| Cow position: | chrX:43426245-43426491 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 69, 46 |
| Conread position: | 57-249 |
| Cow position: | chrX:9839188-9839380 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 76, 174 |
| Conread position: | 59-284 |
| Cow position: | chrX:48089441-48089207 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 96 |
| Conread position: | 62-249 |
| Cow position: | chrX:21640392-21640581 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 37, 171 |
| Conread position: | 78-275 |
| Cow position: | chrX:23179298-23179094 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 55, 24 |
| Conread position: | 83-345 |
| Cow position: | chrX:43980726-43980978 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 54, 11 |
| Conread position: | 96-249 |
| Cow position: | chrX:30980136-30979979 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 15 |
| Conread position: | 96-284 |
| Cow position: | chrX:29874371-29874175 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 13 |
| Conread position: | 102-272 |
| Cow position: | chrX:16419155-16419332 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 102-282 |
| Cow position: | chrX:159750-159565 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 110-273 |
| Cow position: | chrX:12304573-12304746 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 133-275 |
| Cow position: | chrX:4446746-4446886 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 141-287 |
| Cow position: | chrX:34470762-34470910 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 110, 89 |
| Conread position: | 143-247 |
| Cow position: | chrX:3951092-3951195 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 145-247 |
| Cow position: | chrX:18417252-18417150 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 147-287 |
| Cow position: | chrX:46028707-46028562 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 148-247 |
| Cow position: | chrX:10289571-10289473 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 148-284 |
| Cow position: | chrX:488734-488872 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 154-287 |
| Cow position: | chrX:4545291-4545156 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 155-287 |
| Cow position: | chrX:31273265-31273402 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.