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Cow genome map

           
Conread name:
           
rcmu17_f19.y1
        

               
Conread position:
               
55-315
               

               
Cow position:
               
chr23:1655761-1656022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 173
               

               
Conread position:
               
55-315
               

               
Cow position:
               
chr23:3245051-3244790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 177
               

               
Conread position:
               
55-315
               

               
Cow position:
               
chr23:19221781-19221516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
65-302
               

               
Cow position:
               
chr23:34315084-34314842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 168
               

               
Conread position:
               
66-277
               

               
Cow position:
               
chr23:15710196-15709982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
66-284
               

               
Cow position:
               
chr23:38973724-38973944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
48, 162
               

               
Conread position:
               
66-311
               

               
Cow position:
               
chr23:21336609-21336361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 165
               

               
Conread position:
               
66-313
               

               
Cow position:
               
chr23:5436763-5436517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
66-320
               

               
Cow position:
               
chr23:4327813-4327569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr23:21445997-21446257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
185, 159
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr23:32480154-32479873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
66-331
               

               
Cow position:
               
chr23:34356519-34356786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
67-272
               

               
Cow position:
               
chr23:5745056-5745266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
94, 38
               

               
Conread position:
               
68-225
               

               
Cow position:
               
chr23:1670781-1670939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
68-313
               

               
Cow position:
               
chr23:39573377-39573131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
68-315
               

               
Cow position:
               
chr23:16583029-16582782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
183, 95
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr23:1254569-1254816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
183, 52
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr23:13511615-13511854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
165, 37
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr23:13945915-13946166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 177
               

               
Conread position:
               
68-327
               

               
Cow position:
               
chr23:28945185-28944925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
183, 83
               

               
Conread position:
               
68-330
               

               
Cow position:
               
chr23:2282295-2282040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
183, 88
               

               
Conread position:
               
68-330
               

               
Cow position:
               
chr23:22574037-22573762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
146, 91
               

               
Conread position:
               
69-219
               

               
Cow position:
               
chr23:4343282-4343435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
69-313
               

               
Cow position:
               
chr23:6592819-6592582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
192, 152
               

               
Conread position:
               
69-315
               

               
Cow position:
               
chr23:1189018-1188792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
182, 40
               

               
Conread position:
               
69-315
               

               
Cow position:
               
chr23:20388764-20388526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
182, 36
               

               
Conread position:
               
69-330
               

               
Cow position:
               
chr23:24685132-24685384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
182, 80
               

               
Conread position:
               
70-203
               

               
Cow position:
               
chr23:1928913-1929046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
70-203
               

               
Cow position:
               
chr23:18367579-18367715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
70-291
               

               
Cow position:
               
chr23:24984285-24984066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
181, 36
               

               
Conread position:
               
70-306
               

               
Cow position:
               
chr23:1876592-1876830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 157
               

               
Conread position:
               
70-308
               

               
Cow position:
               
chr23:16700157-16699921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 82
               

               
Conread position:
               
70-311
               

               
Cow position:
               
chr23:1605111-1605352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 39
               

               
Conread position:
               
70-313
               

               
Cow position:
               
chr23:306406-306648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
70-315
               

               
Cow position:
               
chr23:8837804-8837562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
70-315
               

               
Cow position:
               
chr23:10829698-10829454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
55, 35
               

               
Conread position:
               
70-315
               

               
Cow position:
               
chr23:16847850-16848097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
70-315
               

               
Cow position:
               
chr23:34416445-34416689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
70-316
               

               
Cow position:
               
chr23:1398153-1397910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 51
               

               
Conread position:
               
70-316
               

               
Cow position:
               
chr23:36018030-36018279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 167
               

               
Conread position:
               
70-316
               

               
Cow position:
               
chr23:38503227-38502979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 198
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr23:10852933-10853192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 138
               

               
Conread position:
               
70-331
               

               
Cow position:
               
chr23:468576-468318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
181, 78
               

               
Conread position:
               
71-208
               

               
Cow position:
               
chr23:1503329-1503463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
71-220
               

               
Cow position:
               
chr23:23113914-23114064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
71-259
               

               
Cow position:
               
chr23:1921343-1921156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
178, 92
               

               
Conread position:
               
71-288
               

               
Cow position:
               
chr23:349842-349623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
71-312
               

               
Cow position:
               
chr23:4966703-4966943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
94, 28
               

               
Conread position:
               
71-313
               

               
Cow position:
               
chr23:5162310-5162555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 161
               

               
Conread position:
               
71-315
               

               
Cow position:
               
chr23:3890682-3890447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
190, 69
               

               
Conread position:
               
71-315
               

               
Cow position:
               
chr23:18416164-18415928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
71-315
               

               
Cow position:
               
chr23:18802389-18802142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
80, 106
               

               
Conread position:
               
71-325
               

               
Cow position:
               
chr23:37065725-37065987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
86, 162
               

               
Conread position:
               
71-329
               

               
Cow position:
               
chr23:1536208-1536463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr23:4968638-4968383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
203, 81
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr23:22804608-22804867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 81
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr23:33622268-33622003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
71-331
               

               
Cow position:
               
chr23:16631152-16631417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
72-203
               

               
Cow position:
               
chr23:39028664-39028795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-219
               

               
Cow position:
               
chr23:26942323-26942473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
72-223
               

               
Cow position:
               
chr23:3955295-3955454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
72-227
               

               
Cow position:
               
chr23:6720399-6720242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
72-280
               

               
Cow position:
               
chr23:18322532-18322334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
179, 76
               

               
Conread position:
               
72-284
               

               
Cow position:
               
chr23:4562769-4562982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
179, 163
               

               
Conread position:
               
72-284
               

               
Cow position:
               
chr23:25378538-25378743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
179, 84
               

               
Conread position:
               
72-305
               

               
Cow position:
               
chr23:27563824-27563588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
72-311
               

               
Cow position:
               
chr23:26949083-26949320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
178, 89
               

               
Conread position:
               
72-312
               

               
Cow position:
               
chr23:15287246-15287015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
179, 37
               

               
Conread position:
               
72-312
               

               
Cow position:
               
chr23:23409623-23409858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 83
               

               
Conread position:
               
72-314
               

               
Cow position:
               
chr23:4104288-4104522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
179, 68
               

               
Conread position:
               
72-314
               

               
Cow position:
               
chr23:12091475-12091230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
179, 79
               

               
Conread position:
               
72-314
               

               
Cow position:
               
chr23:22396561-22396320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
112, 45
               

               
Conread position:
               
72-315
               

               
Cow position:
               
chr23:37921-38155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
126, 33
               

               
Conread position:
               
72-315
               

               
Cow position:
               
chr23:1767712-1767960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr23:9734298-9734537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
179, 89
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr23:24704165-24704420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
94, 159
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr23:25864804-25864568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
124, 36
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr23:29242834-29243066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
104, 65
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr23:39083337-39083579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
72-317
               

               
Cow position:
               
chr23:4528999-4528750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
57, 162
               

               
Conread position:
               
72-320
               

               
Cow position:
               
chr23:13555548-13555304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
189, 33
               

               
Conread position:
               
72-320
               

               
Cow position:
               
chr23:41472498-41472754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 158
               

               
Conread position:
               
72-329
               

               
Cow position:
               
chr23:9226158-9226418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 133
               

               
Conread position:
               
72-329
               

               
Cow position:
               
chr23:38455298-38455036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr23:187061-187323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
95, 157
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr23:5437114-5436857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
189, 79
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr23:5617461-5617719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr23:5723428-5723681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
88, 150
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr23:20195033-20194784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
179, 87
               

               
Conread position:
               
73-192
               

               
Cow position:
               
chr23:1068428-1068312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
73-225
               

               
Cow position:
               
chr23:3208735-3208583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
73-225
               

               
Cow position:
               
chr23:9713204-9713359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
73-231
               

               
Cow position:
               
chr23:2055590-2055747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
73-257
               

               
Cow position:
               
chr23:7402586-7402769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
73-277
               

               
Cow position:
               
chr23:1647503-1647706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
96, 110
               

               
Conread position:
               
73-280
               

               
Cow position:
               
chr23:30999463-30999657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
178, 89
               

               
Conread position:
               
73-281
               

               
Cow position:
               
chr23:28053161-28053365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
143, 33
               

               
Conread position:
               
73-282
               

               
Cow position:
               
chr23:10014423-10014624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
87, 120
               

               
Conread position:
               
73-291
               

               
Cow position:
               
chr23:36309305-36309524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
91, 126
               

               
Conread position:
               
73-294
               

               
Cow position:
               
chr23:25669199-25668985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
73-303
               

               
Cow position:
               
chr23:20171460-20171696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
73-303
               

               
Cow position:
               
chr23:26050920-26051154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 158
               

               
Conread position:
               
73-304
               

               
Cow position:
               
chr23:17404723-17404955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
92, 154
               

               
Conread position:
               
73-306
               

               
Cow position:
               
chr23:19774658-19774887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
178, 83
               

               
Conread position:
               
73-307
               

               
Cow position:
               
chr23:16881278-16881041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
73-307
               

               
Cow position:
               
chr23:29459205-29458979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 22
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr23:1742241-1742474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
94, 174
               

               
Conread position:
               
73-309
               

               
Cow position:
               
chr23:27544713-27544948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
73-312
               

               
Cow position:
               
chr23:39753002-39753238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 50
               

               
Conread position:
               
73-313
               

               
Cow position:
               
chr23:307342-307581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
73-313
               

               
Cow position:
               
chr23:1337416-1337184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
178, 83
               

               
Conread position:
               
73-313
               

               
Cow position:
               
chr23:2501969-2501728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
90, 53
               

               
Conread position:
               
73-314
               

               
Cow position:
               
chr23:20435168-20434937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
73-314
               

               
Cow position:
               
chr23:33711646-33711886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
178, 83
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr23:7574747-7574496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr23:14164517-14164266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr23:25358620-25358841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 23
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr23:26632687-26632933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr23:40891244-40891491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 158
               

               
Conread position:
               
73-317
               

               
Cow position:
               
chr23:30950844-30951085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
178, 33
               

               
Conread position:
               
73-317
               

               
Cow position:
               
chr23:36172406-36172654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
174, 84
               

               
Conread position:
               
73-317
               

               
Cow position:
               
chr23:40789862-40790102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 56
               

               
Conread position:
               
73-320
               

               
Cow position:
               
chr23:344290-344056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 84
               

               
Conread position:
               
73-320
               

               
Cow position:
               
chr23:12334091-12334342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 166
               

               
Conread position:
               
73-321
               

               
Cow position:
               
chr23:15742976-15743223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
73-322
               

               
Cow position:
               
chr23:18296693-18296942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 122
               

               
Conread position:
               
73-326
               

               
Cow position:
               
chr23:24867190-24867444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 159
               

               
Conread position:
               
73-328
               

               
Cow position:
               
chr23:3247469-3247731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
73-329
               

               
Cow position:
               
chr23:1923952-1923694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 109
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr23:799782-799522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
157, 27
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr23:1636163-1636412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 110
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr23:7845177-7845435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
88, 76
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr23:20056982-20056738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 154
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr23:33153305-33153042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
178, 89
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr23:33601643-33601396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 123
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr23:39775614-39775869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
74-200
               

               
Cow position:
               
chr23:38854851-38854723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
74-228
               

               
Cow position:
               
chr23:1803678-1803826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
74-230
               

               
Cow position:
               
chr23:9594946-9594793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
74-284
               

               
Cow position:
               
chr23:33940270-33940061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
74-302
               

               
Cow position:
               
chr23:40781211-40781444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr23:9652593-9652366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
186, 35
               

               
Conread position:
               
74-308
               

               
Cow position:
               
chr23:13599230-13599461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
177, 89
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr23:8293390-8293629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr23:11129123-11129360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr23:20248810-20248568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
92, 153
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr23:39813389-39813627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr23:40778152-40778391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr23:4499246-4499005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
187, 89
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr23:5706885-5707122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
92, 24
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr23:18698138-18697897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
60, 113
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr23:40844539-40844778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
177, 26
               

               
Conread position:
               
74-317
               

               
Cow position:
               
chr23:10554123-10553879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
74-317
               

               
Cow position:
               
chr23:14838855-14838617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
177, 64
               

               
Conread position:
               
74-319
               

               
Cow position:
               
chr23:18402403-18402159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 74
               

               
Conread position:
               
74-320
               

               
Cow position:
               
chr23:14739333-14739583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
74-320
               

               
Cow position:
               
chr23:26795023-26794785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
74-329
               

               
Cow position:
               
chr23:4726673-4726935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
85, 151
               

               
Conread position:
               
74-330
               

               
Cow position:
               
chr23:1885286-1885029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
177, 88
               

               
Conread position:
               
74-330
               

               
Cow position:
               
chr23:6223874-6224114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
177, 31
               

               
Conread position:
               
74-330
               

               
Cow position:
               
chr23:16797924-16797659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 157
               

               
Conread position:
               
75-249
               

               
Cow position:
               
chr23:3522639-3522810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
75-253
               

               
Cow position:
               
chr23:33570022-33570199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
75-315
               

               
Cow position:
               
chr23:40648839-40648603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
75-330
               

               
Cow position:
               
chr23:35239234-35239497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
135, 104
               

               
Conread position:
               
76-312
               

               
Cow position:
               
chr23:31970648-31970414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
76-315
               

               
Cow position:
               
chr23:11081142-11081383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
85, 161
               

               
Conread position:
               
76-316
               

               
Cow position:
               
chr23:11380365-11380123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
153, 129
               

               
Conread position:
               
76-316
               

               
Cow position:
               
chr23:39780644-39780883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 17
               

               
Conread position:
               
76-330
               

               
Cow position:
               
chr23:20557958-20557698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 153
               

               
Conread position:
               
77-260
               

               
Cow position:
               
chr23:417045-417219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
174, 40
               

               
Conread position:
               
77-317
               

               
Cow position:
               
chr23:6995094-6994853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 85
               

               
Conread position:
               
78-306
               

               
Cow position:
               
chr23:6035331-6035549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
78-320
               

               
Cow position:
               
chr23:26849017-26848767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 157
               

               
Conread position:
               
79-315
               

               
Cow position:
               
chr23:29069552-29069313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 151
               

               
Conread position:
               
79-330
               

               
Cow position:
               
chr23:25675809-25675551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
172, 145
               

               
Conread position:
               
80-316
               

               
Cow position:
               
chr23:24480067-24479833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
81-315
               

               
Cow position:
               
chr23:15280606-15280369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
86, 149
               

               
Conread position:
               
82-257
               

               
Cow position:
               
chr23:18036764-18036589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 67
               

               
Conread position:
               
82-294
               

               
Cow position:
               
chr23:11845169-11845382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
83-316
               

               
Cow position:
               
chr23:4329786-4329535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
77, 158
               

               
Conread position:
               
83-319
               

               
Cow position:
               
chr23:18403901-18404137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
168, 137
               

               
Conread position:
               
84-330
               

               
Cow position:
               
chr23:534123-534370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 113
               

               
Conread position:
               
85-214
               

               
Cow position:
               
chr23:8379031-8378905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
85-219
               

               
Cow position:
               
chr23:4445822-4445687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
85-278
               

               
Cow position:
               
chr23:19371174-19370984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
166, 77
               

               
Conread position:
               
85-312
               

               
Cow position:
               
chr23:18902151-18901930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
85-315
               

               
Cow position:
               
chr23:19173456-19173236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
166, 25
               

               
Conread position:
               
85-315
               

               
Cow position:
               
chr23:39275786-39276024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
85-316
               

               
Cow position:
               
chr23:283491-283265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
85-316
               

               
Cow position:
               
chr23:21502741-21502502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
85-320
               

               
Cow position:
               
chr23:1701067-1701304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 144
               

               
Conread position:
               
85-320
               

               
Cow position:
               
chr23:26986375-26986139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr23:5540056-5540289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
166, 71
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr23:5795374-5795620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr23:12363722-12363475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 149
               

               
Conread position:
               
86-293
               

               
Cow position:
               
chr23:3262599-3262392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
86-316
               

               
Cow position:
               
chr23:4335975-4336195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
165, 23
               

               
Conread position:
               
87-320
               

               
Cow position:
               
chr23:38208624-38208861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
74, 142
               

               
Conread position:
               
87-330
               

               
Cow position:
               
chr23:21788866-21788622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
88-316
               

               
Cow position:
               
chr23:3293592-3293823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
88-327
               

               
Cow position:
               
chr23:8917774-8917539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
90-304
               

               
Cow position:
               
chr23:2405805-2406018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
90-325
               

               
Cow position:
               
chr23:3191225-3190987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
75, 68
               

               
Conread position:
               
91-291
               

               
Cow position:
               
chr23:4795075-4795273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
75, 147
               

               
Conread position:
               
95-315
               

               
Cow position:
               
chr23:11212412-11212635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
96-317
               

               
Cow position:
               
chr23:20002162-20002385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 132
               

               
Conread position:
               
97-264
               

               
Cow position:
               
chr23:670528-670696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 127
               

               
Conread position:
               
98-303
               

               
Cow position:
               
chr23:17484939-17484731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
98-307
               

               
Cow position:
               
chr23:2799491-2799699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
101-330
               

               
Cow position:
               
chr23:14651791-14651564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 5
               

               
Conread position:
               
105-330
               

               
Cow position:
               
chr23:10416502-10416284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
146, 35
               

               
Conread position:
               
109-313
               

               
Cow position:
               
chr23:21309492-21309287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
109-316
               

               
Cow position:
               
chr23:29345840-29345641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
142, 55
               

               
Conread position:
               
109-330
               

               
Cow position:
               
chr23:769633-769396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 141
               

               
Conread position:
               
110-289
               

               
Cow position:
               
chr23:12050282-12050458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
141, 30
               

               
Conread position:
               
110-308
               

               
Cow position:
               
chr23:22298114-22297918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
110-312
               

               
Cow position:
               
chr23:5603361-5603161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
140, 18
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr23:3967637-3967431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr23:21440080-21439872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr23:38845527-38845727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
109, 48
               

               
Conread position:
               
110-317
               

               
Cow position:
               
chr23:3430990-3431197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
110-326
               

               
Cow position:
               
chr23:11224779-11224994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
141, 23
               

               
Conread position:
               
110-330
               

               
Cow position:
               
chr23:17486905-17486683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
110-330
               

               
Cow position:
               
chr23:21452810-21452589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
111-303
               

               
Cow position:
               
chr23:11751208-11751019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
111-320
               

               
Cow position:
               
chr23:16780627-16780429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
112-327
               

               
Cow position:
               
chr23:38264610-38264392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
112-328
               

               
Cow position:
               
chr23:33628849-33629068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
114-320
               

               
Cow position:
               
chr23:41348702-41348492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 118
               

               
Conread position:
               
115-303
               

               
Cow position:
               
chr23:35247292-35247483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
115-331
               

               
Cow position:
               
chr23:39811434-39811213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
118-312
               

               
Cow position:
               
chr23:16961225-16961422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 112
               

               
Conread position:
               
118-319
               

               
Cow position:
               
chr23:24701161-24700950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 104
               

               
Conread position:
               
118-323
               

               
Cow position:
               
chr23:18649770-18649967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
120-237
               

               
Cow position:
               
chr23:39520518-39520400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
120-320
               

               
Cow position:
               
chr23:4972698-4972898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
121-316
               

               
Cow position:
               
chr23:10876328-10876529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 97
               

               
Conread position:
               
121-326
               

               
Cow position:
               
chr23:349018-348808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
122-276
               

               
Cow position:
               
chr23:1499554-1499400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
122-316
               

               
Cow position:
               
chr23:18822925-18823118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
126-307
               

               
Cow position:
               
chr23:19765293-19765473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
126-330
               

               
Cow position:
               
chr23:40443795-40444000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
128-317
               

               
Cow position:
               
chr23:29107133-29106946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
132, 63
               

               
Conread position:
               
130-330
               

               
Cow position:
               
chr23:35929898-35930094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
132-316
               

               
Cow position:
               
chr23:4916628-4916819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
117, 72
               

               
Conread position:
               
133-316
               

               
Cow position:
               
chr23:3244522-3244340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
134-282
               

               
Cow position:
               
chr23:32309630-32309780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
134-313
               

               
Cow position:
               
chr23:4877302-4877486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
135-330
               

               
Cow position:
               
chr23:16447745-16447550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chr23:2470947-2471149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
141-321
               

               
Cow position:
               
chr23:39793630-39793808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
144-330
               

               
Cow position:
               
chr23:1759202-1759391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
145-320
               

               
Cow position:
               
chr23:360734-360555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
145-330
               

               
Cow position:
               
chr23:4003596-4003793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
146-330
               

               
Cow position:
               
chr23:29479849-29480033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
105, 17
               

               
Conread position:
               
147-320
               

               
Cow position:
               
chr23:26283682-26283855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
148-300
               

               
Cow position:
               
chr23:30655852-30655701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
148-316
               

               
Cow position:
               
chr23:13674074-13673903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
149-330
               

               
Cow position:
               
chr23:36200374-36200543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
102, 12
               

               
Conread position:
               
149-331
               

               
Cow position:
               
chr23:18692216-18692029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
152-313
               

               
Cow position:
               
chr23:14895710-14895548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 84
               

               
Conread position:
               
156-315
               

               
Cow position:
               
chr23:3234813-3234653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
156-316
               

               
Cow position:
               
chr23:1936675-1936513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
158-292
               

               
Cow position:
               
chr23:27529113-27528980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
93, 5
               

               
Conread position:
               
162-307
               

               
Cow position:
               
chr23:57190-57042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
163-308
               

               
Cow position:
               
chr23:23904353-23904208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
163-316
               

               
Cow position:
               
chr23:8698394-8698549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
163-330
               

               
Cow position:
               
chr23:20563672-20563841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
166-314
               

               
Cow position:
               
chr23:4054195-4054343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
168-316
               

               
Cow position:
               
chr23:21438473-21438626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
169-316
               

               
Cow position:
               
chr23:3835614-3835467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
169-316
               

               
Cow position:
               
chr23:14569520-14569372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
169-320
               

               
Cow position:
               
chr23:25938406-25938257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
172-315
               

               
Cow position:
               
chr23:27790001-27790143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
172-316
               

               
Cow position:
               
chr23:4241654-4241513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
172-330
               

               
Cow position:
               
chr23:18739481-18739317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
174-330
               

               
Cow position:
               
chr23:17597412-17597567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
177-315
               

               
Cow position:
               
chr23:5686633-5686494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
179-330
               

               
Cow position:
               
chr23:32621274-32621432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
180-312
               

               
Cow position:
               
chr23:24779551-24779418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
180-316
               

               
Cow position:
               
chr23:40738027-40737889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
183-330
               

               
Cow position:
               
chr23:12405825-12405676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
183-330
               

               
Cow position:
               
chr23:21423762-21423910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
189-330
               

               
Cow position:
               
chr23:38993090-38992949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
191-330
               

               
Cow position:
               
chr23:1798113-1798257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
200-330
               

               
Cow position:
               
chr23:17012727-17012598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
51, 36
               

               
Conread position:
               
206-330
               

               
Cow position:
               
chr23:21664320-21664447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
211-316
               

               
Cow position:
               
chr23:18417115-18417221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 25
               
Show alignments to all cow chromosomes.