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Cow genome map

           
Conread name:
           
rcmu17_f19.y1
        

               
Conread position:
               
54-330
               

               
Cow position:
               
chr3:21015121-21014836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
57-187
               

               
Cow position:
               
chr3:83691879-83691752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
57-291
               

               
Cow position:
               
chr3:80468832-80468601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
204, 53
               

               
Conread position:
               
60-303
               

               
Cow position:
               
chr3:3037085-3036834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
81, 183
               

               
Conread position:
               
61-330
               

               
Cow position:
               
chr3:38783463-38783725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
190, 90
               

               
Conread position:
               
63-320
               

               
Cow position:
               
chr3:15954238-15953979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
95, 166
               

               
Conread position:
               
65-314
               

               
Cow position:
               
chr3:72271-72529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
66-202
               

               
Cow position:
               
chr3:3062413-3062555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
66-207
               

               
Cow position:
               
chr3:44534910-44534767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
66-225
               

               
Cow position:
               
chr3:27544483-27544328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
17, 98
               

               
Conread position:
               
66-249
               

               
Cow position:
               
chr3:61171654-61171475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
66-310
               

               
Cow position:
               
chr3:51033222-51033463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
185, 69
               

               
Conread position:
               
66-313
               

               
Cow position:
               
chr3:45667496-45667246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
66-315
               

               
Cow position:
               
chr3:34871420-34871666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
66-315
               

               
Cow position:
               
chr3:66900885-66900632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
66-316
               

               
Cow position:
               
chr3:80053687-80053442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 95
               

               
Conread position:
               
66-319
               

               
Cow position:
               
chr3:61278765-61279013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
67-184
               

               
Cow position:
               
chr3:42588210-42588329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
67-208
               

               
Cow position:
               
chr3:63861038-63860896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
89, 57
               

               
Conread position:
               
67-312
               

               
Cow position:
               
chr3:32585006-32585248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
67-329
               

               
Cow position:
               
chr3:65969014-65969282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 164
               

               
Conread position:
               
68-182
               

               
Cow position:
               
chr3:11043575-11043691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
68-203
               

               
Cow position:
               
chr3:44623031-44622898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
68-203
               

               
Cow position:
               
chr3:76169431-76169296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
68-249
               

               
Cow position:
               
chr3:80953500-80953680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 161
               

               
Conread position:
               
68-258
               

               
Cow position:
               
chr3:81359251-81359064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
183, 72
               

               
Conread position:
               
68-306
               

               
Cow position:
               
chr3:73820516-73820279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 60
               

               
Conread position:
               
68-307
               

               
Cow position:
               
chr3:73443233-73443003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
183, 76
               

               
Conread position:
               
68-308
               

               
Cow position:
               
chr3:5365531-5365771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 94
               

               
Conread position:
               
68-310
               

               
Cow position:
               
chr3:52017622-52017867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
99, 158
               

               
Conread position:
               
68-311
               

               
Cow position:
               
chr3:74500092-74500341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
90, 164
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr3:48900484-48900231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 38
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr3:53113027-53113277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
92, 98
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr3:67704396-67704648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
92, 163
               

               
Conread position:
               
68-316
               

               
Cow position:
               
chr3:70334841-70334593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 93
               

               
Conread position:
               
68-324
               

               
Cow position:
               
chr3:82056255-82056009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
68-328
               

               
Cow position:
               
chr3:48296563-48296812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
95, 113
               

               
Conread position:
               
68-328
               

               
Cow position:
               
chr3:66708218-66707952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 102
               

               
Conread position:
               
68-330
               

               
Cow position:
               
chr3:13890329-13890597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
90, 161
               

               
Conread position:
               
68-330
               

               
Cow position:
               
chr3:24468525-24468265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
183, 88
               

               
Conread position:
               
69-226
               

               
Cow position:
               
chr3:23037771-23037609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
69-245
               

               
Cow position:
               
chr3:33698584-33698760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 167
               

               
Conread position:
               
69-253
               

               
Cow position:
               
chr3:83797980-83797797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 95
               

               
Conread position:
               
69-259
               

               
Cow position:
               
chr3:14633131-14632939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
96, 30
               

               
Conread position:
               
69-293
               

               
Cow position:
               
chr3:71238328-71238548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
99, 136
               

               
Conread position:
               
69-303
               

               
Cow position:
               
chr3:11711816-11712044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
91, 162
               

               
Conread position:
               
69-305
               

               
Cow position:
               
chr3:15228964-15228732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 57
               

               
Conread position:
               
69-315
               

               
Cow position:
               
chr3:59034892-59035141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
69-320
               

               
Cow position:
               
chr3:37041269-37041524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 163
               

               
Conread position:
               
70-194
               

               
Cow position:
               
chr3:4087308-4087180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
70-219
               

               
Cow position:
               
chr3:54960046-54960193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 24
               

               
Conread position:
               
70-228
               

               
Cow position:
               
chr3:61539659-61539819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
70-235
               

               
Cow position:
               
chr3:26739561-26739394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
70-242
               

               
Cow position:
               
chr3:55947438-55947610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
70-249
               

               
Cow position:
               
chr3:17957321-17957500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
70-249
               

               
Cow position:
               
chr3:53095077-53094898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 166
               

               
Conread position:
               
70-257
               

               
Cow position:
               
chr3:3913592-3913400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
70-257
               

               
Cow position:
               
chr3:26489226-26489038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 159
               

               
Conread position:
               
70-257
               

               
Cow position:
               
chr3:44837522-44837334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
70-257
               

               
Cow position:
               
chr3:55434186-55434371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
70-257
               

               
Cow position:
               
chr3:60933275-60933459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
70-257
               

               
Cow position:
               
chr3:81507253-81507069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
70-284
               

               
Cow position:
               
chr3:10896686-10896892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
181, 87
               

               
Conread position:
               
70-288
               

               
Cow position:
               
chr3:49461074-49460852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
70-295
               

               
Cow position:
               
chr3:5097062-5097288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 158
               

               
Conread position:
               
70-300
               

               
Cow position:
               
chr3:38347060-38347276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
181, 26
               

               
Conread position:
               
70-308
               

               
Cow position:
               
chr3:60389623-60389857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
181, 70
               

               
Conread position:
               
70-312
               

               
Cow position:
               
chr3:188719-188970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 173
               

               
Conread position:
               
70-315
               

               
Cow position:
               
chr3:25944940-25945194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
80, 166
               

               
Conread position:
               
70-315
               

               
Cow position:
               
chr3:31206731-31206977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
70-315
               

               
Cow position:
               
chr3:39661594-39661356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
181, 53
               

               
Conread position:
               
70-315
               

               
Cow position:
               
chr3:54551868-54551612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
31, 169
               

               
Conread position:
               
70-316
               

               
Cow position:
               
chr3:26874448-26874693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
70-316
               

               
Cow position:
               
chr3:45279323-45279568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
70-316
               

               
Cow position:
               
chr3:53384427-53384178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 29
               

               
Conread position:
               
70-320
               

               
Cow position:
               
chr3:2648655-2648405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
70-320
               

               
Cow position:
               
chr3:53592838-53592583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
88, 110
               

               
Conread position:
               
70-323
               

               
Cow position:
               
chr3:76268123-76267866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 161
               

               
Conread position:
               
70-327
               

               
Cow position:
               
chr3:79271866-79271594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
70-329
               

               
Cow position:
               
chr3:1517658-1517397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 71
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr3:33253021-33252775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
181, 69
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr3:55819606-55819866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
99, 165
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr3:72390941-72391205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
181, 84
               

               
Conread position:
               
71-192
               

               
Cow position:
               
chr3:67161799-67161921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
71-202
               

               
Cow position:
               
chr3:45312907-45313037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
90, 55
               

               
Conread position:
               
71-205
               

               
Cow position:
               
chr3:49731784-49731649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
71-208
               

               
Cow position:
               
chr3:61024446-61024308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
71-225
               

               
Cow position:
               
chr3:42178015-42178167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
71-228
               

               
Cow position:
               
chr3:72018974-72019132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
71-234
               

               
Cow position:
               
chr3:55106580-55106420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
71-234
               

               
Cow position:
               
chr3:66375175-66375339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
71-257
               

               
Cow position:
               
chr3:67929404-67929218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
71-268
               

               
Cow position:
               
chr3:11200124-11199925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 165
               

               
Conread position:
               
71-268
               

               
Cow position:
               
chr3:74878732-74878535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
180, 91
               

               
Conread position:
               
71-297
               

               
Cow position:
               
chr3:74502463-74502242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
180, 66
               

               
Conread position:
               
71-305
               

               
Cow position:
               
chr3:83490943-83491176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
189, 85
               

               
Conread position:
               
71-311
               

               
Cow position:
               
chr3:4050051-4050290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
71-311
               

               
Cow position:
               
chr3:14263251-14263489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
71-315
               

               
Cow position:
               
chr3:59040424-59040668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
71-316
               

               
Cow position:
               
chr3:32457057-32457295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
180, 88
               

               
Conread position:
               
71-316
               

               
Cow position:
               
chr3:63179719-63179956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
99, 69
               

               
Conread position:
               
71-316
               

               
Cow position:
               
chr3:73467481-73467737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
71-316
               

               
Cow position:
               
chr3:76713467-76713214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 136
               

               
Conread position:
               
71-317
               

               
Cow position:
               
chr3:57624322-57624567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 24
               

               
Conread position:
               
71-317
               

               
Cow position:
               
chr3:75570587-75570351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
71-320
               

               
Cow position:
               
chr3:45211157-45211407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
71-320
               

               
Cow position:
               
chr3:77365441-77365184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
87, 175
               

               
Conread position:
               
71-329
               

               
Cow position:
               
chr3:55712288-55712551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 165
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr3:19793734-19793473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr3:26981923-26982175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
180, 71
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr3:36375685-36375421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 48
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr3:49482850-49482595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
110, 79
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr3:54434834-54435085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
71-330
               

               
Cow position:
               
chr3:79645585-79645310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
71-331
               

               
Cow position:
               
chr3:44101828-44102085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
180, 89
               

               
Conread position:
               
72-210
               

               
Cow position:
               
chr3:1534762-1534621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
72-219
               

               
Cow position:
               
chr3:84000471-84000617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
72-232
               

               
Cow position:
               
chr3:5416361-5416203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
72-242
               

               
Cow position:
               
chr3:39328253-39328426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
72, 158
               

               
Conread position:
               
72-258
               

               
Cow position:
               
chr3:19708246-19708065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
179, 87
               

               
Conread position:
               
72-258
               

               
Cow position:
               
chr3:22820426-22820614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
90, 167
               

               
Conread position:
               
72-300
               

               
Cow position:
               
chr3:59101687-59101913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
72-301
               

               
Cow position:
               
chr3:15751863-15751627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
72-303
               

               
Cow position:
               
chr3:18459663-18459439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
179, 79
               

               
Conread position:
               
72-303
               

               
Cow position:
               
chr3:73764337-73764111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
72-304
               

               
Cow position:
               
chr3:80581522-80581745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
179, 84
               

               
Conread position:
               
72-307
               

               
Cow position:
               
chr3:49650244-49650481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
72-311
               

               
Cow position:
               
chr3:31850511-31850280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
179, 48
               

               
Conread position:
               
72-311
               

               
Cow position:
               
chr3:75687580-75687341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
179, 163
               

               
Conread position:
               
72-313
               

               
Cow position:
               
chr3:16333659-16333899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
179, 34
               

               
Conread position:
               
72-313
               

               
Cow position:
               
chr3:26920767-26921007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
72-313
               

               
Cow position:
               
chr3:55970364-55970605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 154
               

               
Conread position:
               
72-313
               

               
Cow position:
               
chr3:79292688-79292926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 34
               

               
Conread position:
               
72-314
               

               
Cow position:
               
chr3:116056-116290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
179, 33
               

               
Conread position:
               
72-314
               

               
Cow position:
               
chr3:8393209-8393445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
179, 64
               

               
Conread position:
               
72-314
               

               
Cow position:
               
chr3:39171625-39171390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
97, 121
               

               
Conread position:
               
72-314
               

               
Cow position:
               
chr3:54100863-54100626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 87
               

               
Conread position:
               
72-315
               

               
Cow position:
               
chr3:12712060-12711814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 158
               

               
Conread position:
               
72-315
               

               
Cow position:
               
chr3:14626299-14626049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 162
               

               
Conread position:
               
72-315
               

               
Cow position:
               
chr3:23876853-23877101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 193
               

               
Conread position:
               
72-315
               

               
Cow position:
               
chr3:52863326-52863082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
177, 100
               

               
Conread position:
               
72-315
               

               
Cow position:
               
chr3:68648023-68648275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
139, 90
               

               
Conread position:
               
72-315
               

               
Cow position:
               
chr3:84243910-84243669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 155
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr3:3889709-3889468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 56
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr3:43726935-43727173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr3:48252742-48252988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr3:55010306-55010064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
88, 126
               

               
Conread position:
               
72-316
               

               
Cow position:
               
chr3:59884214-59883966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
72-317
               

               
Cow position:
               
chr3:38691549-38691305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 89
               

               
Conread position:
               
72-320
               

               
Cow position:
               
chr3:8733497-8733253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
72-320
               

               
Cow position:
               
chr3:19792751-19793011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
88, 174
               

               
Conread position:
               
72-320
               

               
Cow position:
               
chr3:23920571-23920325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
179, 90
               

               
Conread position:
               
72-320
               

               
Cow position:
               
chr3:68145984-68145742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
179, 75
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr3:46006168-46005913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
72-324
               

               
Cow position:
               
chr3:53588529-53588274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 159
               

               
Conread position:
               
72-325
               

               
Cow position:
               
chr3:9663313-9663063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
179, 42
               

               
Conread position:
               
72-328
               

               
Cow position:
               
chr3:65236883-65237138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 77
               

               
Conread position:
               
72-329
               

               
Cow position:
               
chr3:71231256-71231514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 92
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr3:210175-210439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr3:3032263-3032526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
93, 143
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr3:11254301-11254048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr3:30179939-30180200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 160
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr3:38828626-38828870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
179, 73
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr3:60597401-60597654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
72-330
               

               
Cow position:
               
chr3:82461036-82461293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 156
               

               
Conread position:
               
72-331
               

               
Cow position:
               
chr3:58540670-58540405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
73-194
               

               
Cow position:
               
chr3:27212220-27212343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
73-213
               

               
Cow position:
               
chr3:15231889-15232029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
120, 91
               

               
Conread position:
               
73-216
               

               
Cow position:
               
chr3:15859808-15859665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
73-238
               

               
Cow position:
               
chr3:83201665-83201502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
73-257
               

               
Cow position:
               
chr3:34937702-34937886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 134
               

               
Conread position:
               
73-267
               

               
Cow position:
               
chr3:66609984-66609791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
178, 150
               

               
Conread position:
               
73-277
               

               
Cow position:
               
chr3:73759657-73759454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
73-282
               

               
Cow position:
               
chr3:26553856-26553647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
73-282
               

               
Cow position:
               
chr3:76015150-76015360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
73-287
               

               
Cow position:
               
chr3:78896508-78896720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
178, 53
               

               
Conread position:
               
73-288
               

               
Cow position:
               
chr3:7940697-7940483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
87, 119
               

               
Conread position:
               
73-291
               

               
Cow position:
               
chr3:58969041-58968826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
174, 67
               

               
Conread position:
               
73-294
               

               
Cow position:
               
chr3:72675951-72676171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
73-295
               

               
Cow position:
               
chr3:5374193-5374409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
178, 44
               

               
Conread position:
               
73-295
               

               
Cow position:
               
chr3:59799106-59799329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
178, 155
               

               
Conread position:
               
73-295
               

               
Cow position:
               
chr3:62046521-62046745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
73-295
               

               
Cow position:
               
chr3:68881253-68881041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
178, 78
               

               
Conread position:
               
73-295
               

               
Cow position:
               
chr3:74533211-74533430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
178, 41
               

               
Conread position:
               
73-297
               

               
Cow position:
               
chr3:48629735-48629506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 189
               

               
Conread position:
               
73-301
               

               
Cow position:
               
chr3:17895705-17895935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
73-302
               

               
Cow position:
               
chr3:2198741-2198970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
73-303
               

               
Cow position:
               
chr3:23092120-23091889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
73-303
               

               
Cow position:
               
chr3:37186689-37186915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 20
               

               
Conread position:
               
73-303
               

               
Cow position:
               
chr3:45647991-45648219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
82, 153
               

               
Conread position:
               
73-303
               

               
Cow position:
               
chr3:50614496-50614730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
94, 165
               

               
Conread position:
               
73-303
               

               
Cow position:
               
chr3:59588379-59588599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
178, 33
               

               
Conread position:
               
73-304
               

               
Cow position:
               
chr3:30222046-30222281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
86, 158
               

               
Conread position:
               
73-305
               

               
Cow position:
               
chr3:66292318-66292085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
73-307
               

               
Cow position:
               
chr3:26219191-26218960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
177, 20
               

               
Conread position:
               
73-307
               

               
Cow position:
               
chr3:55272188-55271952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
92, 163
               

               
Conread position:
               
73-307
               

               
Cow position:
               
chr3:57760358-57760591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
178, 88
               

               
Conread position:
               
73-307
               

               
Cow position:
               
chr3:70565879-70565644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
178, 76
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr3:24352719-24352954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr3:28908343-28908109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
177, 36
               

               
Conread position:
               
73-309
               

               
Cow position:
               
chr3:67744764-67744533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
73-310
               

               
Cow position:
               
chr3:15506310-15506544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
73-310
               

               
Cow position:
               
chr3:27532799-27532559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 134
               

               
Conread position:
               
73-312
               

               
Cow position:
               
chr3:20993670-20993912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
73-312
               

               
Cow position:
               
chr3:59451454-59451702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
73-312
               

               
Cow position:
               
chr3:76922804-76922565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 108
               

               
Conread position:
               
73-313
               

               
Cow position:
               
chr3:83474604-83474844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
73-314
               

               
Cow position:
               
chr3:53739327-53739085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 162
               

               
Conread position:
               
73-314
               

               
Cow position:
               
chr3:65413421-65413177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 156
               

               
Conread position:
               
73-314
               

               
Cow position:
               
chr3:75046018-75045776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 110
               

               
Conread position:
               
73-315
               

               
Cow position:
               
chr3:13301989-13301750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
73-315
               

               
Cow position:
               
chr3:18066994-18067233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 136
               

               
Conread position:
               
73-315
               

               
Cow position:
               
chr3:48810778-48810545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
73-315
               

               
Cow position:
               
chr3:70334105-70333871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
178, 90
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:1830710-1830474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:2680376-2680615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
178, 76
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:3985186-3985425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 89
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:23408493-23408256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
178, 76
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:49790951-49790710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
178, 74
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:53046798-53046561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:59630643-59630411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
178, 86
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:64281073-64280829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
138, 163
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:66884081-66883843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
178, 74
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:70899754-70899992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
73-316
               

               
Cow position:
               
chr3:75158218-75158457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 115
               

               
Conread position:
               
73-317
               

               
Cow position:
               
chr3:27109042-27108785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
132, 33
               

               
Conread position:
               
73-317
               

               
Cow position:
               
chr3:63269081-63269324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 155
               

               
Conread position:
               
73-319
               

               
Cow position:
               
chr3:53150187-53150436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
132, 76
               

               
Conread position:
               
73-319
               

               
Cow position:
               
chr3:83215118-83215367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
67, 164
               

               
Conread position:
               
73-320
               

               
Cow position:
               
chr3:23169207-23168960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
73-320
               

               
Cow position:
               
chr3:32184162-32183924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 157
               

               
Conread position:
               
73-320
               

               
Cow position:
               
chr3:59691757-59691996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
188, 53
               

               
Conread position:
               
73-320
               

               
Cow position:
               
chr3:81471236-81470990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
178, 67
               

               
Conread position:
               
73-322
               

               
Cow position:
               
chr3:5100908-5100664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
178, 84
               

               
Conread position:
               
73-323
               

               
Cow position:
               
chr3:29813103-29813341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
178, 129
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr3:2216224-2216478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
73-325
               

               
Cow position:
               
chr3:61143959-61144210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
178, 65
               

               
Conread position:
               
73-328
               

               
Cow position:
               
chr3:8393795-8394056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 243
               

               
Conread position:
               
73-328
               

               
Cow position:
               
chr3:27274390-27274641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
73-329
               

               
Cow position:
               
chr3:55835966-55835709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 156
               

               
Conread position:
               
73-329
               

               
Cow position:
               
chr3:57273925-57274176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
175, 22
               

               
Conread position:
               
73-329
               

               
Cow position:
               
chr3:57764086-57764333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
73-329
               

               
Cow position:
               
chr3:68586879-68587134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 157
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:2025045-2025320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:7566560-7566304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:15052093-15051835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
94, 154
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:15153551-15153805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:18686766-18687018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
178, 86
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:19585720-19585981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:31309495-31309234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:54945987-54946243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
88, 155
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:68616466-68616218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:70762264-70762006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
103, 72
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:71238015-71238267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
178, 94
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:73708907-73709164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
181, 37
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:75050760-75050504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:76155846-76156103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:77581968-77582223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
178, 91
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr3:80564822-80565081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
82, 113
               

               
Conread position:
               
74-207
               

               
Cow position:
               
chr3:78894463-78894333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
74-208
               

               
Cow position:
               
chr3:59271400-59271536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
74-220
               

               
Cow position:
               
chr3:77729311-77729461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
74-224
               

               
Cow position:
               
chr3:69849647-69849498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
74-241
               

               
Cow position:
               
chr3:75727724-75727558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 89
               

               
Conread position:
               
74-242
               

               
Cow position:
               
chr3:22089418-22089249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
74-257
               

               
Cow position:
               
chr3:79271098-79270915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
173, 90
               

               
Conread position:
               
74-289
               

               
Cow position:
               
chr3:68583142-68582925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
93, 69
               

               
Conread position:
               
74-289
               

               
Cow position:
               
chr3:72473772-72473990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
82, 154
               

               
Conread position:
               
74-291
               

               
Cow position:
               
chr3:49218454-49218226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
155, 82
               

               
Conread position:
               
74-294
               

               
Cow position:
               
chr3:61840136-61840355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 149
               

               
Conread position:
               
74-297
               

               
Cow position:
               
chr3:24872574-24872787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 109
               

               
Conread position:
               
74-301
               

               
Cow position:
               
chr3:46901057-46901284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
116, 88
               

               
Conread position:
               
74-303
               

               
Cow position:
               
chr3:18725776-18725555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
177, 50
               

               
Conread position:
               
74-303
               

               
Cow position:
               
chr3:55085317-55085081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
66, 161
               

               
Conread position:
               
74-303
               

               
Cow position:
               
chr3:64172304-64172529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
177, 60
               

               
Conread position:
               
74-305
               

               
Cow position:
               
chr3:29891552-29891318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
93, 154
               

               
Conread position:
               
74-305
               

               
Cow position:
               
chr3:49678986-49679223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
74-311
               

               
Cow position:
               
chr3:29360280-29360054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
186, 31
               

               
Conread position:
               
74-312
               

               
Cow position:
               
chr3:32787319-32787558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 75
               

               
Conread position:
               
74-312
               

               
Cow position:
               
chr3:35153481-35153715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
74-313
               

               
Cow position:
               
chr3:49382812-49383047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
74-314
               

               
Cow position:
               
chr3:24615979-24615751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
177, 64
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr3:5366630-5366869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
177, 77
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr3:51578461-51578225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr3:53318264-53318502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
177, 85
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr3:53572894-53572651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
94, 68
               

               
Conread position:
               
74-315
               

               
Cow position:
               
chr3:54373999-54373759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
177, 88
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr3:20675014-20674774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr3:23471603-23471356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr3:24935230-24935466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr3:59621785-59621546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 35
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr3:60264856-60264614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 40
               

               
Conread position:
               
74-316
               

               
Cow position:
               
chr3:67544008-67543766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
176, 108
               

               
Conread position:
               
74-317
               

               
Cow position:
               
chr3:29596253-29596493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
74-319
               

               
Cow position:
               
chr3:3738347-3738586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
177, 87
               

               
Conread position:
               
74-320
               

               
Cow position:
               
chr3:15443870-15443623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 131
               

               
Conread position:
               
74-320
               

               
Cow position:
               
chr3:17456404-17456166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
92, 31
               

               
Conread position:
               
74-320
               

               
Cow position:
               
chr3:71497282-71497032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
74-325
               

               
Cow position:
               
chr3:34669867-34669624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
74-325
               

               
Cow position:
               
chr3:35852606-35852363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
74-327
               

               
Cow position:
               
chr3:11987188-11987442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
79, 94
               

               
Conread position:
               
74-327
               

               
Cow position:
               
chr3:17134196-17134445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
74-327
               

               
Cow position:
               
chr3:38035731-38035474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 90
               

               
Conread position:
               
74-330
               

               
Cow position:
               
chr3:2506616-2506359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
74-330
               

               
Cow position:
               
chr3:43233368-43233620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
177, 69
               

               
Conread position:
               
74-330
               

               
Cow position:
               
chr3:71478452-71478711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
74-330
               

               
Cow position:
               
chr3:73394981-73395234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
74-330
               

               
Cow position:
               
chr3:77271414-77271161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
177, 84
               

               
Conread position:
               
74-330
               

               
Cow position:
               
chr3:78093524-78093273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
177, 71
               

               
Conread position:
               
75-200
               

               
Cow position:
               
chr3:17952517-17952643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
75-245
               

               
Cow position:
               
chr3:70631877-70632050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
75-282
               

               
Cow position:
               
chr3:20437791-20437588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
75-289
               

               
Cow position:
               
chr3:3638048-3638253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
176, 84
               

               
Conread position:
               
75-319
               

               
Cow position:
               
chr3:17935074-17934834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
75-329
               

               
Cow position:
               
chr3:48241477-48241726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
75-330
               

               
Cow position:
               
chr3:2393102-2392852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
176, 133
               

               
Conread position:
               
75-330
               

               
Cow position:
               
chr3:55319041-55318781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
75-330
               

               
Cow position:
               
chr3:59473981-59474237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
76-208
               

               
Cow position:
               
chr3:41367124-41366987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
76-223
               

               
Cow position:
               
chr3:28323044-28323186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
76-226
               

               
Cow position:
               
chr3:59514966-59515115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
76-244
               

               
Cow position:
               
chr3:35005640-35005804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
76-296
               

               
Cow position:
               
chr3:67520310-67520084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
83, 157
               

               
Conread position:
               
76-303
               

               
Cow position:
               
chr3:58765217-58764986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
76-315
               

               
Cow position:
               
chr3:2674890-2675130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
175, 152
               

               
Conread position:
               
76-315
               

               
Cow position:
               
chr3:6689863-6690101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
76-315
               

               
Cow position:
               
chr3:15951050-15950814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
76-317
               

               
Cow position:
               
chr3:14552740-14552978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
175, 38
               

               
Conread position:
               
76-329
               

               
Cow position:
               
chr3:4319573-4319825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
175, 90
               

               
Conread position:
               
76-331
               

               
Cow position:
               
chr3:76024381-76024622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
149, 48
               

               
Conread position:
               
77-255
               

               
Cow position:
               
chr3:71430344-71430165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
77-307
               

               
Cow position:
               
chr3:53240125-53240350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
184, 85
               

               
Conread position:
               
77-310
               

               
Cow position:
               
chr3:61116995-61116757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
24, 155
               

               
Conread position:
               
77-316
               

               
Cow position:
               
chr3:59000889-59000654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
174, 63
               

               
Conread position:
               
77-328
               

               
Cow position:
               
chr3:58973162-58973408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
89, 58
               

               
Conread position:
               
77-329
               

               
Cow position:
               
chr3:17058678-17058431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
174, 77
               

               
Conread position:
               
77-329
               

               
Cow position:
               
chr3:70401764-70402011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 83
               

               
Conread position:
               
77-330
               

               
Cow position:
               
chr3:13380424-13380161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
82, 162
               

               
Conread position:
               
77-330
               

               
Cow position:
               
chr3:52652216-52651963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 31
               

               
Conread position:
               
77-331
               

               
Cow position:
               
chr3:64526710-64526968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 110
               

               
Conread position:
               
78-252
               

               
Cow position:
               
chr3:43528378-43528196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
79-311
               

               
Cow position:
               
chr3:19198846-19199082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
79-314
               

               
Cow position:
               
chr3:18144257-18144018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 152
               

               
Conread position:
               
80-245
               

               
Cow position:
               
chr3:15992580-15992747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 151
               

               
Conread position:
               
80-257
               

               
Cow position:
               
chr3:26992431-26992612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 152
               

               
Conread position:
               
80-307
               

               
Cow position:
               
chr3:34270781-34271007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 95
               

               
Conread position:
               
80-309
               

               
Cow position:
               
chr3:74846845-74846615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
81-200
               

               
Cow position:
               
chr3:2903431-2903308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
81-315
               

               
Cow position:
               
chr3:73298953-73299180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
170, 75
               

               
Conread position:
               
81-330
               

               
Cow position:
               
chr3:58527262-58527494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
170, 13
               

               
Conread position:
               
82-244
               

               
Cow position:
               
chr3:60892491-60892653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
82-302
               

               
Cow position:
               
chr3:16254956-16254753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
169, 38
               

               
Conread position:
               
85-203
               

               
Cow position:
               
chr3:25059949-25060068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
85-203
               

               
Cow position:
               
chr3:30701177-30701298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
85-211
               

               
Cow position:
               
chr3:73590128-73589997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
85-218
               

               
Cow position:
               
chr3:83708099-83707970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
85-255
               

               
Cow position:
               
chr3:29807336-29807504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
101, 125
               

               
Conread position:
               
85-258
               

               
Cow position:
               
chr3:46350541-46350714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 120
               

               
Conread position:
               
85-284
               

               
Cow position:
               
chr3:23445022-23444818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
85-294
               

               
Cow position:
               
chr3:46541957-46541749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
166, 53
               

               
Conread position:
               
85-295
               

               
Cow position:
               
chr3:55109746-55109532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 146
               

               
Conread position:
               
85-300
               

               
Cow position:
               
chr3:61169663-61169885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 149
               

               
Conread position:
               
85-304
               

               
Cow position:
               
chr3:17235338-17235127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
85-306
               

               
Cow position:
               
chr3:27697106-27696886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
166, 66
               

               
Conread position:
               
85-307
               

               
Cow position:
               
chr3:42423462-42423235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 149
               

               
Conread position:
               
85-310
               

               
Cow position:
               
chr3:26960719-26960492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
85-311
               

               
Cow position:
               
chr3:26903987-26904206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
85-312
               

               
Cow position:
               
chr3:14465840-14465609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
85-312
               

               
Cow position:
               
chr3:56476551-56476780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
85-314
               

               
Cow position:
               
chr3:12978745-12978518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
174, 77
               

               
Conread position:
               
85-314
               

               
Cow position:
               
chr3:22232781-22232557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
85-315
               

               
Cow position:
               
chr3:3649347-3649123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
166, 69
               

               
Conread position:
               
85-315
               

               
Cow position:
               
chr3:22509897-22510124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 141
               

               
Conread position:
               
85-315
               

               
Cow position:
               
chr3:28898351-28898121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
166, 77
               

               
Conread position:
               
85-315
               

               
Cow position:
               
chr3:72342115-72342346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
85-316
               

               
Cow position:
               
chr3:18393517-18393293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
85-316
               

               
Cow position:
               
chr3:21081503-21081284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
85-316
               

               
Cow position:
               
chr3:80071997-80072233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 145
               

               
Conread position:
               
85-316
               

               
Cow position:
               
chr3:84175955-84175722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 145
               

               
Conread position:
               
85-320
               

               
Cow position:
               
chr3:7661723-7661958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
85-320
               

               
Cow position:
               
chr3:49327812-49328052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 152
               

               
Conread position:
               
85-320
               

               
Cow position:
               
chr3:67930312-67930077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
176, 67
               

               
Conread position:
               
85-320
               

               
Cow position:
               
chr3:71246897-71247125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
164, 41
               

               
Conread position:
               
85-320
               

               
Cow position:
               
chr3:74134576-74134810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
85-326
               

               
Cow position:
               
chr3:51234225-51233986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr3:8060998-8061241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr3:39969997-39969746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr3:44932383-44932629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 146
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr3:55177880-55177634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 147
               

               
Conread position:
               
85-330
               

               
Cow position:
               
chr3:74079768-74079521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 143
               

               
Conread position:
               
86-220
               

               
Cow position:
               
chr3:9843459-9843592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
86-295
               

               
Cow position:
               
chr3:14194307-14194098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
86-301
               

               
Cow position:
               
chr3:79884610-79884399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
165, 77
               

               
Conread position:
               
86-315
               

               
Cow position:
               
chr3:54740017-54739786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
73, 144
               

               
Conread position:
               
86-330
               

               
Cow position:
               
chr3:25477686-25477909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
165, 34
               

               
Conread position:
               
86-330
               

               
Cow position:
               
chr3:65058575-65058815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 23
               

               
Conread position:
               
87-257
               

               
Cow position:
               
chr3:71161668-71161841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
87-291
               

               
Cow position:
               
chr3:56504-56300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
122, 60
               

               
Conread position:
               
87-315
               

               
Cow position:
               
chr3:56678481-56678249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 64
               

               
Conread position:
               
87-330
               

               
Cow position:
               
chr3:174820-175061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
87-330
               

               
Cow position:
               
chr3:22221193-22221443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
89-315
               

               
Cow position:
               
chr3:19711460-19711238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
172, 77
               

               
Conread position:
               
89-316
               

               
Cow position:
               
chr3:33693692-33693921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
90-235
               

               
Cow position:
               
chr3:54552005-54551861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
134, 73
               

               
Conread position:
               
90-266
               

               
Cow position:
               
chr3:65800467-65800637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
90-307
               

               
Cow position:
               
chr3:53270705-53270923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
161, 136
               

               
Conread position:
               
90-307
               

               
Cow position:
               
chr3:55189881-55189662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
75, 208
               

               
Conread position:
               
90-308
               

               
Cow position:
               
chr3:15752759-15752542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 118
               

               
Conread position:
               
90-314
               

               
Cow position:
               
chr3:61323209-61323431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
90-315
               

               
Cow position:
               
chr3:81039869-81039647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 59
               

               
Conread position:
               
90-316
               

               
Cow position:
               
chr3:35621178-35621404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
77, 116
               

               
Conread position:
               
90-326
               

               
Cow position:
               
chr3:53221890-53222125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
90-330
               

               
Cow position:
               
chr3:14601836-14601586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
90-330
               

               
Cow position:
               
chr3:59604726-59604959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
91-316
               

               
Cow position:
               
chr3:10103924-10104142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
160, 29
               

               
Conread position:
               
91-316
               

               
Cow position:
               
chr3:31225316-31225534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
170, 15
               

               
Conread position:
               
91-330
               

               
Cow position:
               
chr3:48468059-48468293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
92-323
               

               
Cow position:
               
chr3:78945957-78945730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
66, 110
               

               
Conread position:
               
92-331
               

               
Cow position:
               
chr3:58134810-58134566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
65, 137
               

               
Conread position:
               
93-245
               

               
Cow position:
               
chr3:6403300-6403448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
93-320
               

               
Cow position:
               
chr3:2518653-2518433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
94-320
               

               
Cow position:
               
chr3:80740443-80740665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
97-306
               

               
Cow position:
               
chr3:37599544-37599336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 65
               

               
Conread position:
               
97-316
               

               
Cow position:
               
chr3:58318071-58317846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
97-323
               

               
Cow position:
               
chr3:72504016-72503787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 133
               

               
Conread position:
               
99-320
               

               
Cow position:
               
chr3:55094350-55094125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 140
               

               
Conread position:
               
105-308
               

               
Cow position:
               
chr3:65019975-65019773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
145, 123
               

               
Conread position:
               
105-314
               

               
Cow position:
               
chr3:3698553-3698753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
110-293
               

               
Cow position:
               
chr3:27545926-27545740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
110-302
               

               
Cow position:
               
chr3:84597070-84596877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
110-313
               

               
Cow position:
               
chr3:27727934-27727733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
110-315
               

               
Cow position:
               
chr3:30009018-30008807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr3:3316917-3316714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr3:16752364-16752157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
110-316
               

               
Cow position:
               
chr3:33329709-33329921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
110-317
               

               
Cow position:
               
chr3:55124388-55124181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
48, 117
               

               
Conread position:
               
110-320
               

               
Cow position:
               
chr3:27940247-27940039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
110-320
               

               
Cow position:
               
chr3:83988427-83988638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
110-329
               

               
Cow position:
               
chr3:54506599-54506822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
110-330
               

               
Cow position:
               
chr3:3656409-3656635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
110-330
               

               
Cow position:
               
chr3:18059597-18059821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
110-330
               

               
Cow position:
               
chr3:22165522-22165298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 124
               

               
Conread position:
               
110-330
               

               
Cow position:
               
chr3:45881799-45882016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
110-330
               

               
Cow position:
               
chr3:74234086-74234302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
141, 49
               

               
Conread position:
               
111-330
               

               
Cow position:
               
chr3:57704219-57704449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
111-330
               

               
Cow position:
               
chr3:75238354-75238577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
112-314
               

               
Cow position:
               
chr3:7763554-7763755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
112-315
               

               
Cow position:
               
chr3:4268685-4268476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 122
               

               
Conread position:
               
112-315
               

               
Cow position:
               
chr3:55983992-55984199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
113-303
               

               
Cow position:
               
chr3:35874069-35873884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
114-267
               

               
Cow position:
               
chr3:12670716-12670562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
114-315
               

               
Cow position:
               
chr3:26229996-26230210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
116, 44
               

               
Conread position:
               
114-330
               

               
Cow position:
               
chr3:73460863-73461082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
116-330
               

               
Cow position:
               
chr3:10668979-10668762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
118-288
               

               
Cow position:
               
chr3:79813509-79813684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
118-303
               

               
Cow position:
               
chr3:74088796-74088612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
118-330
               

               
Cow position:
               
chr3:48362980-48363186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
118-330
               

               
Cow position:
               
chr3:52608083-52608298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
119-315
               

               
Cow position:
               
chr3:75778157-75777959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
120-308
               

               
Cow position:
               
chr3:58767165-58767357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
120-317
               

               
Cow position:
               
chr3:56943703-56943500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 42
               

               
Conread position:
               
123-320
               

               
Cow position:
               
chr3:81087724-81087533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
124-327
               

               
Cow position:
               
chr3:7337874-7337671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
124-330
               

               
Cow position:
               
chr3:14546909-14547116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
124-330
               

               
Cow position:
               
chr3:48459423-48459212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
126-291
               

               
Cow position:
               
chr3:81277559-81277391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
126-315
               

               
Cow position:
               
chr3:21867125-21866937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
137, 17
               

               
Conread position:
               
126-316
               

               
Cow position:
               
chr3:84250633-84250442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
126-317
               

               
Cow position:
               
chr3:53704055-53703861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
127-314
               

               
Cow position:
               
chr3:53904377-53904553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
127-319
               

               
Cow position:
               
chr3:74900726-74900538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
128-306
               

               
Cow position:
               
chr3:66631437-66631259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
128-320
               

               
Cow position:
               
chr3:23203322-23203126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
128-331
               

               
Cow position:
               
chr3:11640641-11640854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 113
               

               
Conread position:
               
129-314
               

               
Cow position:
               
chr3:23667537-23667720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
129-330
               

               
Cow position:
               
chr3:64196738-64196942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
129-330
               

               
Cow position:
               
chr3:84174215-84174421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
133-330
               

               
Cow position:
               
chr3:48478114-48477922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
134-330
               

               
Cow position:
               
chr3:36160276-36160075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
135-313
               

               
Cow position:
               
chr3:27976606-27976425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
136-273
               

               
Cow position:
               
chr3:45222234-45222092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chr3:15160451-15160634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
143-316
               

               
Cow position:
               
chr3:28258024-28258195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
143-316
               

               
Cow position:
               
chr3:56949157-56948986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
144-327
               

               
Cow position:
               
chr3:20841942-20841762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
144-330
               

               
Cow position:
               
chr3:2483931-2484118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
145-306
               

               
Cow position:
               
chr3:35074813-35074970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
145-315
               

               
Cow position:
               
chr3:28735583-28735412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
145-320
               

               
Cow position:
               
chr3:61467262-61467085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
145-330
               

               
Cow position:
               
chr3:39248092-39247910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
146-329
               

               
Cow position:
               
chr3:9026157-9025967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
148-313
               

               
Cow position:
               
chr3:56704387-56704222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
148-315
               

               
Cow position:
               
chr3:21641921-21642088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 79
               

               
Conread position:
               
150-320
               

               
Cow position:
               
chr3:36913987-36914159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
150-330
               

               
Cow position:
               
chr3:79272639-79272459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
152-302
               

               
Cow position:
               
chr3:11292313-11292160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
153-327
               

               
Cow position:
               
chr3:46792321-46792498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
156-315
               

               
Cow position:
               
chr3:64373217-64373055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
156-316
               

               
Cow position:
               
chr3:5040365-5040207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr3:81234330-81234505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
95, 72
               

               
Conread position:
               
157-312
               

               
Cow position:
               
chr3:13241137-13240978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
158-298
               

               
Cow position:
               
chr3:11606257-11606404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
158-316
               

               
Cow position:
               
chr3:71423609-71423453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
158-317
               

               
Cow position:
               
chr3:67959971-67959819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
158-319
               

               
Cow position:
               
chr3:7427945-7428103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 69
               

               
Conread position:
               
158-319
               

               
Cow position:
               
chr3:57877508-57877671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
158-320
               

               
Cow position:
               
chr3:21997845-21997682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
160-315
               

               
Cow position:
               
chr3:3556490-3556646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
161-316
               

               
Cow position:
               
chr3:59828447-59828291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
78, 91
               

               
Conread position:
               
162-330
               

               
Cow position:
               
chr3:39996944-39996774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 160
               

               
Conread position:
               
163-307
               

               
Cow position:
               
chr3:68059263-68059407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
163-316
               

               
Cow position:
               
chr3:2637874-2638028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
163-316
               

               
Cow position:
               
chr3:74787380-74787529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
163-330
               

               
Cow position:
               
chr3:40213085-40212918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
163-330
               

               
Cow position:
               
chr3:69650941-69650772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 73
               

               
Conread position:
               
164-307
               

               
Cow position:
               
chr3:20515869-20515725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
165-315
               

               
Cow position:
               
chr3:11281716-11281867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
165-316
               

               
Cow position:
               
chr3:77589469-77589616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
166-308
               

               
Cow position:
               
chr3:11705202-11705345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
166-315
               

               
Cow position:
               
chr3:7581766-7581617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
166-315
               

               
Cow position:
               
chr3:49996772-49996619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
167-310
               

               
Cow position:
               
chr3:58940078-58940221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
167-315
               

               
Cow position:
               
chr3:83889199-83889347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
168-330
               

               
Cow position:
               
chr3:5703131-5703293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 68
               

               
Conread position:
               
169-330
               

               
Cow position:
               
chr3:11229411-11229251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
170-330
               

               
Cow position:
               
chr3:52456873-52457025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
170-330
               

               
Cow position:
               
chr3:82366084-82366246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
171-330
               

               
Cow position:
               
chr3:15973522-15973687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
173-320
               

               
Cow position:
               
chr3:35624586-35624440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
173-325
               

               
Cow position:
               
chr3:54905576-54905726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
175-330
               

               
Cow position:
               
chr3:6728370-6728210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
175-330
               

               
Cow position:
               
chr3:41863584-41863739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
177-313
               

               
Cow position:
               
chr3:84137853-84137716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
177-314
               

               
Cow position:
               
chr3:8814150-8814013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
178-315
               

               
Cow position:
               
chr3:83770694-83770832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 50
               

               
Conread position:
               
180-330
               

               
Cow position:
               
chr3:28902794-28902645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 48
               

               
Conread position:
               
181-323
               

               
Cow position:
               
chr3:46559749-46559608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
181-327
               

               
Cow position:
               
chr3:44959908-44960059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
182-330
               

               
Cow position:
               
chr3:24596456-24596307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
184-330
               

               
Cow position:
               
chr3:20021238-20021385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
188-312
               

               
Cow position:
               
chr3:54557646-54557774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
189-330
               

               
Cow position:
               
chr3:75966807-75966665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
191-307
               

               
Cow position:
               
chr3:40199319-40199202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
191-330
               

               
Cow position:
               
chr3:76056309-76056171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
192-330
               

               
Cow position:
               
chr3:47199150-47199007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
193-330
               

               
Cow position:
               
chr3:79339601-79339464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
194-316
               

               
Cow position:
               
chr3:70402623-70402745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
194-329
               

               
Cow position:
               
chr3:61024044-61023904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
198-330
               

               
Cow position:
               
chr3:29234699-29234560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
200-329
               

               
Cow position:
               
chr3:61133622-61133753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
6, 34
               

               
Conread position:
               
206-316
               

               
Cow position:
               
chr3:2179110-2179220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
206-330
               

               
Cow position:
               
chr3:28884170-28884045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
211-314
               

               
Cow position:
               
chr3:4086868-4086764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
211-317
               

               
Cow position:
               
chr3:75772791-75772899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
211-330
               

               
Cow position:
               
chr3:4167279-4167160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
211-330
               

               
Cow position:
               
chr3:35582836-35582958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 16
               
Show alignments to all cow chromosomes.