Non-Coding RNA Search

Cow genome map


           Conread name:
           rcmu17_f19.y1
        

               Conread position:
               49-316
               

               Cow position:
               chr5:12866936-12866676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 183
               

               Conread position:
               55-257
               

               Cow position:
               chr5:34506040-34505834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               55-303
               

               Cow position:
               chr5:28946174-28945921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 158
               

               Conread position:
               55-330
               

               Cow position:
               chr5:26094274-26093996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               27, 71
               

               Conread position:
               57-257
               

               Cow position:
               chr5:34050008-34050210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               103, 92
               

               Conread position:
               62-310
               

               Cow position:
               chr5:46798141-46798388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 75
               

               Conread position:
               65-282
               

               Cow position:
               chr5:61840092-61840310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               186, 91
               

               Conread position:
               66-242
               

               Cow position:
               chr5:54713833-54713656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 162
               

               Conread position:
               66-284
               

               Cow position:
               chr5:58793708-58793487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 164
               

               Conread position:
               66-301
               

               Cow position:
               chr5:75436987-75436751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               66-308
               

               Cow position:
               chr5:3639586-3639353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               66-311
               

               Cow position:
               chr5:63987545-63987298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               66-314
               

               Cow position:
               chr5:54350462-54350211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 164
               

               Conread position:
               66-320
               

               Cow position:
               chr5:59115287-59115537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               33, 94
               

               Conread position:
               66-329
               

               Cow position:
               chr5:44848120-44847860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 91
               

               Conread position:
               66-329
               

               Cow position:
               chr5:58519499-58519251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               66-330
               

               Cow position:
               chr5:7057500-7057229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               67-257
               

               Cow position:
               chr5:57640065-57639882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               93, 39
               

               Conread position:
               67-320
               

               Cow position:
               chr5:63234924-63234672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               95, 140
               

               Conread position:
               67-330
               

               Cow position:
               chr5:12761210-12760952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               100, 73
               

               Conread position:
               68-259
               

               Cow position:
               chr5:69520796-69520985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               88, 46
               

               Conread position:
               68-267
               

               Cow position:
               chr5:4617272-4617469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               85, 41
               

               Conread position:
               68-313
               

               Cow position:
               chr5:54086446-54086687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 87
               

               Conread position:
               68-315
               

               Cow position:
               chr5:29097270-29097518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               97, 80
               

               Conread position:
               68-315
               

               Cow position:
               chr5:37808766-37808512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               68-315
               

               Cow position:
               chr5:53946798-53947048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               52, 162
               

               Conread position:
               68-316
               

               Cow position:
               chr5:35969445-35969684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               183, 31
               

               Conread position:
               68-319
               

               Cow position:
               chr5:66551996-66551741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 39
               

               Conread position:
               68-320
               

               Cow position:
               chr5:49685367-49685121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 91
               

               Conread position:
               68-320
               

               Cow position:
               chr5:62985431-62985668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               221, 41
               

               Conread position:
               68-323
               

               Cow position:
               chr5:44752408-44752148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               95, 37
               

               Conread position:
               68-330
               

               Cow position:
               chr5:69337732-69337986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               100, 29
               

               Conread position:
               69-231
               

               Cow position:
               chr5:2500280-2500113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               69-257
               

               Cow position:
               chr5:34192806-34192998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               92, 41
               

               Conread position:
               69-287
               

               Cow position:
               chr5:21920279-21920494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               89, 156
               

               Conread position:
               69-291
               

               Cow position:
               chr5:56467604-56467817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               182, 83
               

               Conread position:
               69-308
               

               Cow position:
               chr5:47323369-47323606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 90
               

               Conread position:
               69-311
               

               Cow position:
               chr5:13717663-13717424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               182, 83
               

               Conread position:
               69-315
               

               Cow position:
               chr5:53710786-53710538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               95, 80
               

               Conread position:
               69-316
               

               Cow position:
               chr5:458395-458640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 92
               

               Conread position:
               69-317
               

               Cow position:
               chr5:15479030-15479278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               92, 40
               

               Conread position:
               69-317
               

               Cow position:
               chr5:64697691-64697935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               100, 40
               

               Conread position:
               69-330
               

               Cow position:
               chr5:2309652-2309390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               91, 64
               

               Conread position:
               70-239
               

               Cow position:
               chr5:33414504-33414335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               87, 159
               

               Conread position:
               70-257
               

               Cow position:
               chr5:39094460-39094642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               181, 90
               

               Conread position:
               70-257
               

               Cow position:
               chr5:47704222-47704034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 94
               

               Conread position:
               70-257
               

               Cow position:
               chr5:65601368-65601549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               70-257
               

               Cow position:
               chr5:66815665-66815480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               181, 81
               

               Conread position:
               70-275
               

               Cow position:
               chr5:57561425-57561634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               92, 157
               

               Conread position:
               70-280
               

               Cow position:
               chr5:65883868-65883656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               97, 78
               

               Conread position:
               70-283
               

               Cow position:
               chr5:50637735-50637940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 28
               

               Conread position:
               70-292
               

               Cow position:
               chr5:63964261-63964037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               97, 64
               

               Conread position:
               70-304
               

               Cow position:
               chr5:65887101-65886869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               181, 79
               

               Conread position:
               70-308
               

               Cow position:
               chr5:38076575-38076339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               88, 27
               

               Conread position:
               70-315
               

               Cow position:
               chr5:4032087-4031835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               70-315
               

               Cow position:
               chr5:19523805-19524051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               97, 78
               

               Conread position:
               70-315
               

               Cow position:
               chr5:36255352-36255106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               80, 28
               

               Conread position:
               70-315
               

               Cow position:
               chr5:50215650-50215413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               181, 79
               

               Conread position:
               70-315
               

               Cow position:
               chr5:59082284-59082043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               91, 35
               

               Conread position:
               70-316
               

               Cow position:
               chr5:54311240-54311488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               95, 167
               

               Conread position:
               70-320
               

               Cow position:
               chr5:44049606-44049854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               85, 104
               

               Conread position:
               70-320
               

               Cow position:
               chr5:61576449-61576701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               57, 76
               

               Conread position:
               70-320
               

               Cow position:
               chr5:64137159-64137412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               88, 160
               

               Conread position:
               70-320
               

               Cow position:
               chr5:64168332-64168083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               98, 159
               

               Conread position:
               70-322
               

               Cow position:
               chr5:46080230-46079987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               70-330
               

               Cow position:
               chr5:6503972-6503711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               98, 35
               

               Conread position:
               70-331
               

               Cow position:
               chr5:43371290-43371024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               90, 127
               

               Conread position:
               71-196
               

               Cow position:
               chr5:59257799-59257922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               71-203
               

               Cow position:
               chr5:56469918-56469784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 77
               

               Conread position:
               71-215
               

               Cow position:
               chr5:7140202-7140056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               71-229
               

               Cow position:
               chr5:54404985-54404826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               87, 135
               

               Conread position:
               71-236
               

               Cow position:
               chr5:21964193-21964360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               71-244
               

               Cow position:
               chr5:25447469-25447642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               119, 91
               

               Conread position:
               71-266
               

               Cow position:
               chr5:28926275-28926082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               92, 76
               

               Conread position:
               71-300
               

               Cow position:
               chr5:65933022-65932807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               180, 89
               

               Conread position:
               71-303
               

               Cow position:
               chr5:39875031-39875263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               86, 69
               

               Conread position:
               71-307
               

               Cow position:
               chr5:72564668-72564907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               32, 37
               

               Conread position:
               71-308
               

               Cow position:
               chr5:59325929-59325697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               145, 85
               

               Conread position:
               71-313
               

               Cow position:
               chr5:28224360-28224601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               190, 92
               

               Conread position:
               71-315
               

               Cow position:
               chr5:32975645-32975409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               190, 77
               

               Conread position:
               71-316
               

               Cow position:
               chr5:23678796-23678551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 156
               

               Conread position:
               71-316
               

               Cow position:
               chr5:55019201-55019443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 59
               

               Conread position:
               71-320
               

               Cow position:
               chr5:58144695-58144461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               234, 134
               

               Conread position:
               71-322
               

               Cow position:
               chr5:46129755-46129515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               71-323
               

               Cow position:
               chr5:21040067-21039826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               190, 69
               

               Conread position:
               71-328
               

               Cow position:
               chr5:7723578-7723831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               69, 34
               

               Conread position:
               71-328
               

               Cow position:
               chr5:40356959-40356695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               79, 176
               

               Conread position:
               71-329
               

               Cow position:
               chr5:30178601-30178335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               70, 160
               

               Conread position:
               71-330
               

               Cow position:
               chr5:5855774-5856028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               179, 30
               

               Conread position:
               71-330
               

               Cow position:
               chr5:11427329-11427065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               79, 166
               

               Conread position:
               71-330
               

               Cow position:
               chr5:12901823-12902087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               117, 101
               

               Conread position:
               71-330
               

               Cow position:
               chr5:17555125-17554867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               71-330
               

               Cow position:
               chr5:72903324-72903072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               72-196
               

               Cow position:
               chr5:76311275-76311401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               72-203
               

               Cow position:
               chr5:17644748-17644616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               72-214
               

               Cow position:
               chr5:60448123-60448265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               72-222
               

               Cow position:
               chr5:35235801-35235652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               72-237
               

               Cow position:
               chr5:30487144-30487314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               72-256
               

               Cow position:
               chr5:5938233-5938413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               179, 38
               

               Conread position:
               72-259
               

               Cow position:
               chr5:16509003-16509200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               88, 164
               

               Conread position:
               72-284
               

               Cow position:
               chr5:56635808-56636015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               179, 54
               

               Conread position:
               72-300
               

               Cow position:
               chr5:51935099-51935325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               179, 90
               

               Conread position:
               72-300
               

               Cow position:
               chr5:62142578-62142812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               72-303
               

               Cow position:
               chr5:35785068-35784850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               179, 31
               

               Conread position:
               72-305
               

               Cow position:
               chr5:34463677-34463439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               94, 167
               

               Conread position:
               72-306
               

               Cow position:
               chr5:14473506-14473261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               68, 165
               

               Conread position:
               72-306
               

               Cow position:
               chr5:58490625-58490871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 45
               

               Conread position:
               72-311
               

               Cow position:
               chr5:46322903-46322656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               66, 95
               

               Conread position:
               72-315
               

               Cow position:
               chr5:11540140-11539903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               179, 79
               

               Conread position:
               72-315
               

               Cow position:
               chr5:19335877-19335630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               85, 159
               

               Conread position:
               72-315
               

               Cow position:
               chr5:31475591-31475833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               179, 90
               

               Conread position:
               72-315
               

               Cow position:
               chr5:33560826-33560583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               179, 79
               

               Conread position:
               72-315
               

               Cow position:
               chr5:35125960-35126206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               93, 79
               

               Conread position:
               72-315
               

               Cow position:
               chr5:43992229-43992475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 158
               

               Conread position:
               72-315
               

               Cow position:
               chr5:50722956-50723197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               182, 65
               

               Conread position:
               72-315
               

               Cow position:
               chr5:57768075-57767836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               35, 89
               

               Conread position:
               72-315
               

               Cow position:
               chr5:59384783-59384537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 90
               

               Conread position:
               72-315
               

               Cow position:
               chr5:63427100-63426852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               88, 156
               

               Conread position:
               72-316
               

               Cow position:
               chr5:36855112-36855358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               133, 90
               

               Conread position:
               72-316
               

               Cow position:
               chr5:39447623-39447380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 33
               

               Conread position:
               72-316
               

               Cow position:
               chr5:41293988-41294233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 112
               

               Conread position:
               72-316
               

               Cow position:
               chr5:45273593-45273350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               95, 78
               

               Conread position:
               72-316
               

               Cow position:
               chr5:50575692-50575935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 83
               

               Conread position:
               72-316
               

               Cow position:
               chr5:54060184-54060428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               92, 69
               

               Conread position:
               72-316
               

               Cow position:
               chr5:60715450-60715216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               72-319
               

               Cow position:
               chr5:71494727-71494976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               93, 50
               

               Conread position:
               72-320
               

               Cow position:
               chr5:11668278-11668029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 99
               

               Conread position:
               72-320
               

               Cow position:
               chr5:14550674-14550428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               179, 75
               

               Conread position:
               72-328
               

               Cow position:
               chr5:56680156-56680419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               91, 75
               

               Conread position:
               72-330
               

               Cow position:
               chr5:18289037-18289286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 129
               

               Conread position:
               72-330
               

               Cow position:
               chr5:35247202-35246940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               87, 34
               

               Conread position:
               72-330
               

               Cow position:
               chr5:36868647-36868905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               92, 36
               

               Conread position:
               72-330
               

               Cow position:
               chr5:44796824-44796567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               97, 68
               

               Conread position:
               72-330
               

               Cow position:
               chr5:65752764-65753027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 159
               

               Conread position:
               72-330
               

               Cow position:
               chr5:66972335-66972595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 155
               

               Conread position:
               72-330
               

               Cow position:
               chr5:73168094-73167846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               179, 90
               

               Conread position:
               73-197
               

               Cow position:
               chr5:56433712-56433841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               73-200
               

               Cow position:
               chr5:29860255-29860386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               73-203
               

               Cow position:
               chr5:7921492-7921366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               73-208
               

               Cow position:
               chr5:20345074-20345205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               73-208
               

               Cow position:
               chr5:54099419-54099551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               73-211
               

               Cow position:
               chr5:45036929-45037060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               73-214
               

               Cow position:
               chr5:34115558-34115702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               73-219
               

               Cow position:
               chr5:12709796-12709943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               73-220
               

               Cow position:
               chr5:3004640-3004778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               73-239
               

               Cow position:
               chr5:56820354-56820188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               91, 130
               

               Conread position:
               73-257
               

               Cow position:
               chr5:40039862-40039674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               94, 140
               

               Conread position:
               73-258
               

               Cow position:
               chr5:34638792-34638976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               73-283
               

               Cow position:
               chr5:32696913-32696704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               88, 41
               

               Conread position:
               73-287
               

               Cow position:
               chr5:23357243-23357452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 76
               

               Conread position:
               73-287
               

               Cow position:
               chr5:47547809-47547603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               73-292
               

               Cow position:
               chr5:30232807-30233035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               29, 164
               

               Conread position:
               73-295
               

               Cow position:
               chr5:8024287-8024069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 131
               

               Conread position:
               73-300
               

               Cow position:
               chr5:4218782-4218993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               176, 32
               

               Conread position:
               73-300
               

               Cow position:
               chr5:6528591-6528821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               77, 51
               

               Conread position:
               73-302
               

               Cow position:
               chr5:34441883-34441642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 166
               

               Conread position:
               73-302
               

               Cow position:
               chr5:72006946-72006727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               178, 88
               

               Conread position:
               73-303
               

               Cow position:
               chr5:16025549-16025329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               87, 46
               

               Conread position:
               73-303
               

               Cow position:
               chr5:29844187-29844419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               80, 179
               

               Conread position:
               73-303
               

               Cow position:
               chr5:60747370-60747142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               78, 150
               

               Conread position:
               73-306
               

               Cow position:
               chr5:57737018-57737241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               178, 32
               

               Conread position:
               73-307
               

               Cow position:
               chr5:5111167-5110926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 156
               

               Conread position:
               73-307
               

               Cow position:
               chr5:5257385-5257145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               75, 160
               

               Conread position:
               73-307
               

               Cow position:
               chr5:14314433-14314672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 158
               

               Conread position:
               73-308
               

               Cow position:
               chr5:6045199-6045440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               91, 160
               

               Conread position:
               73-308
               

               Cow position:
               chr5:18898887-18899117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               98, 23
               

               Conread position:
               73-308
               

               Cow position:
               chr5:52000130-52000362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               88, 149
               

               Conread position:
               73-310
               

               Cow position:
               chr5:34528470-34528692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               178, 33
               

               Conread position:
               73-311
               

               Cow position:
               chr5:4220892-4221124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               114, 88
               

               Conread position:
               73-311
               

               Cow position:
               chr5:69731415-69731647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               86, 51
               

               Conread position:
               73-312
               

               Cow position:
               chr5:11229761-11229525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               92, 78
               

               Conread position:
               73-313
               

               Cow position:
               chr5:55966971-55966734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               178, 76
               

               Conread position:
               73-313
               

               Cow position:
               chr5:56317206-56317438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               178, 33
               

               Conread position:
               73-313
               

               Cow position:
               chr5:58856012-58856251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               178, 89
               

               Conread position:
               73-314
               

               Cow position:
               chr5:41713210-41713450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               73-314
               

               Cow position:
               chr5:44446960-44446715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               85, 166
               

               Conread position:
               73-314
               

               Cow position:
               chr5:47696534-47696300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               73-315
               

               Cow position:
               chr5:17063182-17062930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               87, 162
               

               Conread position:
               73-315
               

               Cow position:
               chr5:64523959-64523711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               73-316
               

               Cow position:
               chr5:9090112-9089876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               178, 73
               

               Conread position:
               73-316
               

               Cow position:
               chr5:30950008-30949763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               89, 55
               

               Conread position:
               73-316
               

               Cow position:
               chr5:43929829-43929584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               73-316
               

               Cow position:
               chr5:62378699-62378932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               178, 77
               

               Conread position:
               73-316
               

               Cow position:
               chr5:64758863-64758615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               87, 159
               

               Conread position:
               73-316
               

               Cow position:
               chr5:74858481-74858727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               73-317
               

               Cow position:
               chr5:26990300-26990541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               81, 117
               

               Conread position:
               73-319
               

               Cow position:
               chr5:4710237-4709997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               178, 47
               

               Conread position:
               73-320
               

               Cow position:
               chr5:17999584-17999340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               94, 82
               

               Conread position:
               73-320
               

               Cow position:
               chr5:34976936-34976687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               41, 155
               

               Conread position:
               73-320
               

               Cow position:
               chr5:44726418-44726179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               178, 82
               

               Conread position:
               73-320
               

               Cow position:
               chr5:58446711-58446964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               64, 159
               

               Conread position:
               73-322
               

               Cow position:
               chr5:39258430-39258664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               178, 32
               

               Conread position:
               73-323
               

               Cow position:
               chr5:37645982-37646238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 65
               

               Conread position:
               73-329
               

               Cow position:
               chr5:60016075-60016331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               73-330
               

               Cow position:
               chr5:7044799-7044538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 157
               

               Conread position:
               73-330
               

               Cow position:
               chr5:20127964-20128222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               88, 42
               

               Conread position:
               73-330
               

               Cow position:
               chr5:24996315-24996051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               96, 162
               

               Conread position:
               73-330
               

               Cow position:
               chr5:30253649-30253908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               95, 76
               

               Conread position:
               73-330
               

               Cow position:
               chr5:36039096-36038836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               87, 41
               

               Conread position:
               73-330
               

               Cow position:
               chr5:37646640-37646380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               29, 160
               

               Conread position:
               73-330
               

               Cow position:
               chr5:45225916-45225652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               86, 174
               

               Conread position:
               73-330
               

               Cow position:
               chr5:45845784-45845522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               87, 47
               

               Conread position:
               73-330
               

               Cow position:
               chr5:51053740-51053480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               147, 36
               

               Conread position:
               73-330
               

               Cow position:
               chr5:55068619-55068874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               92, 25
               

               Conread position:
               73-330
               

               Cow position:
               chr5:55176798-55177049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               92, 129
               

               Conread position:
               73-330
               

               Cow position:
               chr5:56070764-56071026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               88, 158
               

               Conread position:
               73-330
               

               Cow position:
               chr5:57787714-57787976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               169, 94
               

               Conread position:
               73-330
               

               Cow position:
               chr5:62172324-62172572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               178, 36
               

               Conread position:
               74-207
               

               Cow position:
               chr5:16184996-16185130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               92, 85
               

               Conread position:
               74-219
               

               Cow position:
               chr5:29212853-29212998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               89, 55
               

               Conread position:
               74-220
               

               Cow position:
               chr5:51801063-51800917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               74-234
               

               Cow position:
               chr5:72287004-72286846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               42, 88
               

               Conread position:
               74-244
               

               Cow position:
               chr5:32140799-32140630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               93, 38
               

               Conread position:
               74-257
               

               Cow position:
               chr5:45409231-45409415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               87, 77
               

               Conread position:
               74-258
               

               Cow position:
               chr5:48405270-48405084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 140
               

               Conread position:
               74-259
               

               Cow position:
               chr5:33552501-33552329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               177, 68
               

               Conread position:
               74-259
               

               Cow position:
               chr5:73080110-73080299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 25
               

               Conread position:
               74-282
               

               Cow position:
               chr5:52645170-52644962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               177, 88
               

               Conread position:
               74-295
               

               Cow position:
               chr5:32956187-32955964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               88, 152
               

               Conread position:
               74-303
               

               Cow position:
               chr5:360033-359800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               114, 88
               

               Conread position:
               74-303
               

               Cow position:
               chr5:27102886-27102655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               74-311
               

               Cow position:
               chr5:54768000-54767762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 118
               

               Conread position:
               74-312
               

               Cow position:
               chr5:28230063-28230311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               67, 94
               

               Conread position:
               74-313
               

               Cow position:
               chr5:29827958-29828193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               131, 82
               

               Conread position:
               74-314
               

               Cow position:
               chr5:6683447-6683218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               26, 80
               

               Conread position:
               74-316
               

               Cow position:
               chr5:16893863-16893620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               74-316
               

               Cow position:
               chr5:30629249-30629005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               175, 54
               

               Conread position:
               74-316
               

               Cow position:
               chr5:47317062-47316822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               177, 80
               

               Conread position:
               74-316
               

               Cow position:
               chr5:53855607-53855858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               50, 55
               

               Conread position:
               74-320
               

               Cow position:
               chr5:43858524-43858264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               74-320
               

               Cow position:
               chr5:55756516-55756259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               85, 161
               

               Conread position:
               74-320
               

               Cow position:
               chr5:65776473-65776228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               177, 75
               

               Conread position:
               74-320
               

               Cow position:
               chr5:67932555-67932318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               74-322
               

               Cow position:
               chr5:53835622-53835873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               89, 165
               

               Conread position:
               74-330
               

               Cow position:
               chr5:21617366-21617623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 71
               

               Conread position:
               74-330
               

               Cow position:
               chr5:33833953-33834208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               177, 77
               

               Conread position:
               74-330
               

               Cow position:
               chr5:57327706-57327965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               116, 77
               

               Conread position:
               74-331
               

               Cow position:
               chr5:55955816-55956079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 148
               

               Conread position:
               75-238
               

               Cow position:
               chr5:28459795-28459634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               138, 74
               

               Conread position:
               75-280
               

               Cow position:
               chr5:55928850-55929060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 157
               

               Conread position:
               75-291
               

               Cow position:
               chr5:26377759-26377541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               85, 63
               

               Conread position:
               75-302
               

               Cow position:
               chr5:26262763-26262541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               85, 18
               

               Conread position:
               75-307
               

               Cow position:
               chr5:1396523-1396742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               176, 51
               

               Conread position:
               75-315
               

               Cow position:
               chr5:18574084-18574325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               75-315
               

               Cow position:
               chr5:42064113-42064356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 155
               

               Conread position:
               75-315
               

               Cow position:
               chr5:47871133-47870902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               47, 123
               

               Conread position:
               75-316
               

               Cow position:
               chr5:26477102-26476866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               93, 60
               

               Conread position:
               75-317
               

               Cow position:
               chr5:29771426-29771681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               75-319
               

               Cow position:
               chr5:59873181-59872925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               84, 164
               

               Conread position:
               75-330
               

               Cow position:
               chr5:16214594-16214849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               86, 163
               

               Conread position:
               75-330
               

               Cow position:
               chr5:35459386-35459128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               89, 163
               

               Conread position:
               76-238
               

               Cow position:
               chr5:28456493-28456333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               137, 74
               

               Conread position:
               76-303
               

               Cow position:
               chr5:23529369-23529144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               90, 123
               

               Conread position:
               76-314
               

               Cow position:
               chr5:14904155-14903917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               76-315
               

               Cow position:
               chr5:35208174-35208412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               51, 149
               

               Conread position:
               76-316
               

               Cow position:
               chr5:30805077-30805316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               16, 64
               

               Conread position:
               76-328
               

               Cow position:
               chr5:3771759-3772008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               84, 123
               

               Conread position:
               76-330
               

               Cow position:
               chr5:35229219-35228974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               175, 70
               

               Conread position:
               76-330
               

               Cow position:
               chr5:53055652-53055391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               76-330
               

               Cow position:
               chr5:57527007-57526759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               175, 83
               

               Conread position:
               77-224
               

               Cow position:
               chr5:1766441-1766290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               77-228
               

               Cow position:
               chr5:32378767-32378909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               77-235
               

               Cow position:
               chr5:29980075-29979912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               77-328
               

               Cow position:
               chr5:27411483-27411233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               172, 18
               

               Conread position:
               78-311
               

               Cow position:
               chr5:17028005-17028242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               23, 151
               

               Conread position:
               78-315
               

               Cow position:
               chr5:34109143-34108908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               80-284
               

               Cow position:
               chr5:65588618-65588819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               80-303
               

               Cow position:
               chr5:27419813-27419590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               80-315
               

               Cow position:
               chr5:11769184-11769421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               40, 26
               

               Conread position:
               81-308
               

               Cow position:
               chr5:50533471-50533244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               76, 142
               

               Conread position:
               82-295
               

               Cow position:
               chr5:29903601-29903392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               169, 67
               

               Conread position:
               82-314
               

               Cow position:
               chr5:62870125-62869901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               78, 38
               

               Conread position:
               83-257
               

               Cow position:
               chr5:73167208-73167034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               84, 10
               

               Conread position:
               83-306
               

               Cow position:
               chr5:34624880-34625102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               78, 22
               

               Conread position:
               83-320
               

               Cow position:
               chr5:61914488-61914725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               132, 66
               

               Conread position:
               83-330
               

               Cow position:
               chr5:20779478-20779231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               84-317
               

               Cow position:
               chr5:31640339-31640576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               55, 149
               

               Conread position:
               85-196
               

               Cow position:
               chr5:36250454-36250562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               85-208
               

               Cow position:
               chr5:71579095-71579219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               85-217
               

               Cow position:
               chr5:24485516-24485382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               75, 8
               

               Conread position:
               85-227
               

               Cow position:
               chr5:28927669-28927523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               71, 124
               

               Conread position:
               85-239
               

               Cow position:
               chr5:34107156-34107308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               85-249
               

               Cow position:
               chr5:46122430-46122270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               85-280
               

               Cow position:
               chr5:31481067-31481264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               85-287
               

               Cow position:
               chr5:67540283-67540078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 145
               

               Conread position:
               85-291
               

               Cow position:
               chr5:42744708-42744907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               74, 45
               

               Conread position:
               85-294
               

               Cow position:
               chr5:57935189-57934978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 144
               

               Conread position:
               85-303
               

               Cow position:
               chr5:37757906-37757700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               166, 68
               

               Conread position:
               85-306
               

               Cow position:
               chr5:46512843-46512627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               176, 71
               

               Conread position:
               85-307
               

               Cow position:
               chr5:12556248-12556461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               177, 47
               

               Conread position:
               85-307
               

               Cow position:
               chr5:44994118-44993906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               85-308
               

               Cow position:
               chr5:22242854-22242621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               85-308
               

               Cow position:
               chr5:28302827-28302599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               85-313
               

               Cow position:
               chr5:43402820-43403052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 155
               

               Conread position:
               85-313
               

               Cow position:
               chr5:74643751-74643529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               166, 71
               

               Conread position:
               85-315
               

               Cow position:
               chr5:52165258-52165028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               76, 144
               

               Conread position:
               85-316
               

               Cow position:
               chr5:1165094-1165317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               156, 101
               

               Conread position:
               85-316
               

               Cow position:
               chr5:50713851-50713604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               85-316
               

               Cow position:
               chr5:66581885-66582118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               157, 64
               

               Conread position:
               85-319
               

               Cow position:
               chr5:34300836-34301071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               74, 139
               

               Conread position:
               85-328
               

               Cow position:
               chr5:12557372-12557121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               72, 154
               

               Conread position:
               85-330
               

               Cow position:
               chr5:12873663-12873919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               55, 151
               

               Conread position:
               85-330
               

               Cow position:
               chr5:21828786-21829035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               75, 145
               

               Conread position:
               85-330
               

               Cow position:
               chr5:30845033-30845274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               74, 41
               

               Conread position:
               85-330
               

               Cow position:
               chr5:35826523-35826765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               166, 62
               

               Conread position:
               85-330
               

               Cow position:
               chr5:39937027-39937285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               85-330
               

               Cow position:
               chr5:49474625-49474386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               85-330
               

               Cow position:
               chr5:57101606-57101358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 32
               

               Conread position:
               85-330
               

               Cow position:
               chr5:69461254-69461503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               86-317
               

               Cow position:
               chr5:45574536-45574773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               75, 154
               

               Conread position:
               86-320
               

               Cow position:
               chr5:16206234-16205999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               65, 118
               

               Conread position:
               86-330
               

               Cow position:
               chr5:19752226-19752469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               54, 43
               

               Conread position:
               87-257
               

               Cow position:
               chr5:37893255-37893426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 142
               

               Conread position:
               87-288
               

               Cow position:
               chr5:24349030-24349231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               164, 75
               

               Conread position:
               87-313
               

               Cow position:
               chr5:41165008-41165237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               71, 143
               

               Conread position:
               87-320
               

               Cow position:
               chr5:36650472-36650709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               87-320
               

               Cow position:
               chr5:61492019-61492250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               164, 75
               

               Conread position:
               87-330
               

               Cow position:
               chr5:20995175-20994916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 152
               

               Conread position:
               89-315
               

               Cow position:
               chr5:61771038-61771270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 74
               

               Conread position:
               90-222
               

               Cow position:
               chr5:30293647-30293512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               90-315
               

               Cow position:
               chr5:57756106-57755884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               68, 110
               

               Conread position:
               90-316
               

               Cow position:
               chr5:37190170-37189945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               161, 61
               

               Conread position:
               90-330
               

               Cow position:
               chr5:42845672-42845425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 142
               

               Conread position:
               90-330
               

               Cow position:
               chr5:57074409-57074164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               90-330
               

               Cow position:
               chr5:60183726-60183968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 142
               

               Conread position:
               91-330
               

               Cow position:
               chr5:47601745-47601978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               160, 60
               

               Conread position:
               92-324
               

               Cow position:
               chr5:57419864-57419634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               159, 49
               

               Conread position:
               93-315
               

               Cow position:
               chr5:38689615-38689388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 138
               

               Conread position:
               94-317
               

               Cow position:
               chr5:28035671-28035895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               95-315
               

               Cow position:
               chr5:12247817-12247586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               18, 141
               

               Conread position:
               95-316
               

               Cow position:
               chr5:67212286-67212512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               58, 145
               

               Conread position:
               95-325
               

               Cow position:
               chr5:41981300-41981529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               65, 134
               

               Conread position:
               96-330
               

               Cow position:
               chr5:41935725-41935487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 10
               

               Conread position:
               97-316
               

               Cow position:
               chr5:1247195-1247415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               62, 133
               

               Conread position:
               97-316
               

               Cow position:
               chr5:23168897-23168674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               64, 134
               

               Conread position:
               98-330
               

               Cow position:
               chr5:4280381-4280612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 57
               

               Conread position:
               98-330
               

               Cow position:
               chr5:59627040-59626804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               60, 8
               

               Conread position:
               99-316
               

               Cow position:
               chr5:40109425-40109644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               67, 131
               

               Conread position:
               101-295
               

               Cow position:
               chr5:1461024-1461220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               57, 5
               

               Conread position:
               101-313
               

               Cow position:
               chr5:43604080-43604286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               150, 5
               

               Conread position:
               101-330
               

               Cow position:
               chr5:7012911-7012681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 5
               

               Conread position:
               110-257
               

               Cow position:
               chr5:33654601-33654453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               58, 126
               

               Conread position:
               110-303
               

               Cow position:
               chr5:22643280-22643093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               110-305
               

               Cow position:
               chr5:45420189-45419996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               141, 48
               

               Conread position:
               110-312
               

               Cow position:
               chr5:29515551-29515358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               110-312
               

               Cow position:
               chr5:56524114-56524322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               40, 123
               

               Conread position:
               110-316
               

               Cow position:
               chr5:66366452-66366667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               43, 128
               

               Conread position:
               110-328
               

               Cow position:
               chr5:45397517-45397733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               51, 41
               

               Conread position:
               110-330
               

               Cow position:
               chr5:61455790-61456011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               49, 120
               

               Conread position:
               110-330
               

               Cow position:
               chr5:63627580-63627367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               151, 31
               

               Conread position:
               110-331
               

               Cow position:
               chr5:59330803-59330570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               39, 126
               

               Conread position:
               111-323
               

               Cow position:
               chr5:34887254-34887038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 117
               

               Conread position:
               112-290
               

               Cow position:
               chr5:19813276-19813094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               112-312
               

               Cow position:
               chr5:58987-58785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 118
               

               Conread position:
               112-312
               

               Cow position:
               chr5:63831874-63832076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               112-314
               

               Cow position:
               chr5:19796919-19797124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               42, 119
               

               Conread position:
               112-315
               

               Cow position:
               chr5:57156367-57156163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               90, 51
               

               Conread position:
               112-315
               

               Cow position:
               chr5:63240923-63241128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 123
               

               Conread position:
               112-316
               

               Cow position:
               chr5:29353187-29352974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               47, 125
               

               Conread position:
               113-331
               

               Cow position:
               chr5:57265957-57265733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               114-315
               

               Cow position:
               chr5:37255389-37255184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 37
               

               Conread position:
               115-316
               

               Cow position:
               chr5:15470882-15471081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               46, 78
               

               Conread position:
               116-330
               

               Cow position:
               chr5:67118369-67118586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               41, 114
               

               Conread position:
               117-305
               

               Cow position:
               chr5:45404993-45405185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               118-314
               

               Cow position:
               chr5:6444198-6444005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               133, 43
               

               Conread position:
               118-314
               

               Cow position:
               chr5:58555093-58555287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               118-317
               

               Cow position:
               chr5:27188078-27188268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               143, 87
               

               Conread position:
               119-267
               

               Cow position:
               chr5:31918599-31918745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               132, 43
               

               Conread position:
               119-312
               

               Cow position:
               chr5:61784774-61784579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               51, 110
               

               Conread position:
               119-314
               

               Cow position:
               chr5:36838908-36839109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               119-316
               

               Cow position:
               chr5:56339066-56338869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               132, 47
               

               Conread position:
               120-308
               

               Cow position:
               chr5:49501870-49501680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               46, 116
               

               Conread position:
               120-308
               

               Cow position:
               chr5:56153569-56153759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               49, 101
               

               Conread position:
               120-315
               

               Cow position:
               chr5:52001666-52001472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               61, 38
               

               Conread position:
               122-308
               

               Cow position:
               chr5:38717275-38717453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               129, 14
               

               Conread position:
               122-330
               

               Cow position:
               chr5:55796008-55795802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 26
               

               Conread position:
               123-295
               

               Cow position:
               chr5:40237171-40237342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               123-303
               

               Cow position:
               chr5:2851546-2851729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 44
               

               Conread position:
               123-314
               

               Cow position:
               chr5:59627059-59627250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               123-330
               

               Cow position:
               chr5:50101420-50101210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               39, 199
               

               Conread position:
               124-320
               

               Cow position:
               chr5:54875740-54875539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               45, 8
               

               Conread position:
               126-299
               

               Cow position:
               chr5:27306264-27306439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               126-330
               

               Cow position:
               chr5:17602240-17602037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 25
               

               Conread position:
               128-316
               

               Cow position:
               chr5:30247557-30247375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               123, 23
               

               Conread position:
               129-330
               

               Cow position:
               chr5:57686777-57686573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 111
               

               Conread position:
               131-329
               

               Cow position:
               chr5:60210178-60209980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               132-314
               

               Cow position:
               chr5:33273657-33273842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               32, 98
               

               Conread position:
               132-315
               

               Cow position:
               chr5:3588993-3589178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 62
               

               Conread position:
               134-294
               

               Cow position:
               chr5:45574399-45574235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               11, 104
               

               Conread position:
               134-315
               

               Cow position:
               chr5:38739430-38739252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 27
               

               Conread position:
               134-326
               

               Cow position:
               chr5:61007034-61007231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               117, 92
               

               Conread position:
               136-316
               

               Cow position:
               chr5:52108296-52108116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               113, 30
               

               Conread position:
               140-307
               

               Cow position:
               chr5:46672180-46672346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               109, 88
               

               Conread position:
               140-316
               

               Cow position:
               chr5:57230365-57230185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 90
               

               Conread position:
               141-330
               

               Cow position:
               chr5:30561909-30562096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               110, 22
               

               Conread position:
               142-316
               

               Cow position:
               chr5:9369290-9369119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 20
               

               Conread position:
               143-296
               

               Cow position:
               chr5:23527653-23527498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               108, 85
               

               Conread position:
               144-315
               

               Cow position:
               chr5:16939613-16939443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               107, 18
               

               Conread position:
               144-330
               

               Cow position:
               chr5:25597815-25597997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               107, 37
               

               Conread position:
               147-320
               

               Cow position:
               chr5:24946223-24946396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               104, 19
               

               Conread position:
               147-329
               

               Cow position:
               chr5:16938040-16937867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               148-304
               

               Cow position:
               chr5:50871793-50871957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               148-315
               

               Cow position:
               chr5:2827358-2827524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               103, 15
               

               Conread position:
               149-314
               

               Cow position:
               chr5:56287519-56287352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               32, 80
               

               Conread position:
               150-320
               

               Cow position:
               chr5:52137920-52138093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               59, 78
               

               Conread position:
               151-330
               

               Cow position:
               chr5:48867478-48867302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 77
               

               Conread position:
               154-330
               

               Cow position:
               chr5:69383243-69383419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               156-315
               

               Cow position:
               chr5:35513204-35513366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               158-310
               

               Cow position:
               chr5:4226340-4226492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               158-313
               

               Cow position:
               chr5:17384157-17384007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               158-330
               

               Cow position:
               chr5:4267663-4267829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               160-330
               

               Cow position:
               chr5:6520006-6520174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               69, 119
               

               Conread position:
               162-330
               

               Cow position:
               chr5:54750812-54750976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               89, 42
               

               Conread position:
               163-306
               

               Cow position:
               chr5:63656475-63656621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               163-315
               

               Cow position:
               chr5:2469209-2469061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               88, 65
               

               Conread position:
               163-315
               

               Cow position:
               chr5:56428313-56428165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               98, 67
               

               Conread position:
               163-316
               

               Cow position:
               chr5:27293886-27293732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               88, 63
               

               Conread position:
               163-316
               

               Cow position:
               chr5:55129341-55129495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               88, 75
               

               Conread position:
               163-316
               

               Cow position:
               chr5:67634519-67634362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               88, 65
               

               Conread position:
               163-327
               

               Cow position:
               chr5:57062531-57062365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               88, 59
               

               Conread position:
               163-330
               

               Cow position:
               chr5:15364267-15364439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               93, 100
               

               Conread position:
               163-330
               

               Cow position:
               chr5:55965896-55965724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 63
               

               Conread position:
               163-330
               

               Cow position:
               chr5:60515030-60514858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               98, 63
               

               Conread position:
               163-330
               

               Cow position:
               chr5:65679972-65679805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               88, 61
               

               Conread position:
               164-320
               

               Cow position:
               chr5:18062320-18062162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 64
               

               Conread position:
               164-320
               

               Cow position:
               chr5:60908665-60908820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 42
               

               Conread position:
               164-330
               

               Cow position:
               chr5:52852970-52853135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               87, 62
               

               Conread position:
               164-330
               

               Cow position:
               chr5:56613565-56613395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               87, 64
               

               Conread position:
               164-330
               

               Cow position:
               chr5:65552709-65552551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               165-315
               

               Cow position:
               chr5:17566438-17566287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               86, 41
               

               Conread position:
               165-329
               

               Cow position:
               chr5:44163369-44163201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               165-330
               

               Cow position:
               chr5:61049332-61049502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               166-314
               

               Cow position:
               chr5:44810238-44810089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               85, 68
               

               Conread position:
               167-330
               

               Cow position:
               chr5:11562721-11562559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               167-330
               

               Cow position:
               chr5:12299913-12300081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               84, 61
               

               Conread position:
               168-329
               

               Cow position:
               chr5:5016432-5016588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               169-316
               

               Cow position:
               chr5:51490241-51490095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 36
               

               Conread position:
               169-320
               

               Cow position:
               chr5:3743326-3743476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 59
               

               Conread position:
               172-317
               

               Cow position:
               chr5:26723455-26723601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               79, 56
               

               Conread position:
               172-331
               

               Cow position:
               chr5:60948140-60948301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               186-330
               

               Cow position:
               chr5:38040543-38040400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 50
               

               Conread position:
               186-330
               

               Cow position:
               chr5:51233998-51233855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               65, 50
               

               Conread position:
               189-330
               

               Cow position:
               chr5:53980730-53980584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               190-315
               

               Cow position:
               chr5:16185403-16185529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               66, 43
               

               Conread position:
               191-312
               

               Cow position:
               chr5:20882598-20882476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               191-316
               

               Cow position:
               chr5:36822913-36823035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               60, 36
               

               Conread position:
               191-329
               

               Cow position:
               chr5:43839976-43839830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               192-316
               

               Cow position:
               chr5:38382772-38382648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               192-330
               

               Cow position:
               chr5:44734698-44734559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 44
               

               Conread position:
               193-316
               

               Cow position:
               chr5:51490574-51490450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               193-330
               

               Cow position:
               chr5:16668725-16668861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               195-329
               

               Cow position:
               chr5:64843941-64843806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               200-329
               

               Cow position:
               chr5:49821463-49821598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 36
               

               Conread position:
               200-330
               

               Cow position:
               chr5:12562725-12562592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               207-316
               

               Cow position:
               chr5:36251154-36251264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 29
               
Show alignments to all cow chromosomes.
Conread position:	49-316
Cow position:	chr5:12866936-12866676 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	186
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	37, 183
Conread position:	55-257
Cow position:	chr5:34506040-34505834 (view UCSC Genome Browser custom track)
Alignm length:	211
Alignm identity:	147
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	37, 74
Conread position:	55-303
Cow position:	chr5:28946174-28945921 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	182
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	40, 158
Conread position:	55-330
Cow position:	chr5:26094274-26093996 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	210
Alignm E-value:	5.99994e-41
Alignm gaps (pig, cow):	27, 71
Conread position:	57-257
Cow position:	chr5:34050008-34050210 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	150
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	103, 92
Conread position:	62-310
Cow position:	chr5:46798141-46798388 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	162
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	41, 75
Conread position:	65-282
Cow position:	chr5:61840092-61840310 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	169
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	186, 91
Conread position:	66-242
Cow position:	chr5:54713833-54713656 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	138
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	18, 162
Conread position:	66-284
Cow position:	chr5:58793708-58793487 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	152
Alignm E-value:	1e-24
Alignm gaps (pig, cow):	96, 164
Conread position:	66-301
Cow position:	chr5:75436987-75436751 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	169
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	20, 64
Conread position:	66-308
Cow position:	chr5:3639586-3639353 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	177
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	20, 99
Conread position:	66-311
Cow position:	chr5:63987545-63987298 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	202
Alignm E-value:	0
Alignm gaps (pig, cow):	20, 40
Conread position:	66-314
Cow position:	chr5:54350462-54350211 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	193
Alignm E-value:	0
Alignm gaps (pig, cow):	97, 164
Conread position:	66-320
Cow position:	chr5:59115287-59115537 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	189
Alignm E-value:	4e-38
Alignm gaps (pig, cow):	33, 94
Conread position:	66-329
Cow position:	chr5:44848120-44847860 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	191
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	29, 91
Conread position:	66-330
Cow position:	chr5:7057500-7057229 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	193
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	20, 98
Conread position:	67-257
Cow position:	chr5:57640065-57639882 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	137
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	93, 39
Conread position:	67-320
Cow position:	chr5:63234924-63234672 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	188
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	95, 140
Conread position:	67-330
Cow position:	chr5:12761210-12760952 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	192
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	100, 73
Conread position:	68-259
Cow position:	chr5:69520796-69520985 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	141
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	88, 46