Cow genome map


           Conread name:
           rcmu21_i11.y1
        

               Conread position:
               16-303
               

               Cow position:
               chr17:22107134-22106835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               10, 255
               

               Conread position:
               17-319
               

               Cow position:
               chr17:4297419-4297723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 104
               

               Conread position:
               18-310
               

               Cow position:
               chr17:15373918-15374219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               34, 257
               

               Conread position:
               18-311
               

               Cow position:
               chr17:37755-38063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               34, 255
               

               Conread position:
               25-293
               

               Cow position:
               chr17:20054679-20054940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               26, 179
               

               Conread position:
               25-303
               

               Cow position:
               chr17:11084897-11084611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               27, 173
               

               Conread position:
               25-306
               

               Cow position:
               chr17:14899241-14899526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               25-321
               

               Cow position:
               chr17:18124418-18124114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               27, 240
               

               Conread position:
               40-318
               

               Cow position:
               chr17:18197415-18197684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               77-319
               

               Cow position:
               chr17:4084645-4084882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               15, 24
               

               Conread position:
               77-319
               

               Cow position:
               chr17:17088014-17087780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               103-308
               

               Cow position:
               chr17:1312158-1311957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               126, 43
               
Show alignments to all cow chromosomes.