Cow genome map
| Conread name: | rcmu21_i11.y1 |
| Conread position: | 9-310 |
| Cow position: | chr3:19125830-19126134 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 43, 114 |
| Conread position: | 12-318 |
| Cow position: | chr3:33470338-33470034 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 40 |
| Conread position: | 16-293 |
| Cow position: | chr3:1482592-1482879 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 35, 250 |
| Conread position: | 18-303 |
| Cow position: | chr3:79592702-79592999 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 36, 263 |
| Conread position: | 18-310 |
| Cow position: | chr3:36171363-36171073 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 18-319 |
| Cow position: | chr3:42994320-42994003 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 24-310 |
| Cow position: | chr3:21026828-21026542 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 24-318 |
| Cow position: | chr3:37008229-37007933 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 25-306 |
| Cow position: | chr3:49335768-49336055 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 222 |
| Conread position: | 26-319 |
| Cow position: | chr3:16294334-16294042 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 117, 165 |
| Conread position: | 52-319 |
| Cow position: | chr3:9404626-9404366 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 91, 101 |
| Conread position: | 56-303 |
| Cow position: | chr3:14862810-14863058 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 173, 202 |
| Conread position: | 56-313 |
| Cow position: | chr3:76933269-76933007 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 89, 130 |
| Conread position: | 56-319 |
| Cow position: | chr3:50460954-50461219 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 87, 165 |
| Conread position: | 83-310 |
| Cow position: | chr3:13477965-13478194 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 90-303 |
| Cow position: | chr3:31396037-31396251 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 53, 171 |
| Conread position: | 91-309 |
| Cow position: | chr3:56719686-56719466 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 52, 136 |
| Conread position: | 104-319 |
| Cow position: | chr3:72602861-72603074 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 165 |
| Conread position: | 112-310 |
| Cow position: | chr3:56100940-56101138 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 158-322 |
| Cow position: | chr3:45567919-45568082 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 96 |
Show alignments to all cow chromosomes.