Cow genome map
| Conread name: | rcmu22_b16.y1 |
| Conread position: | 78-250 |
| Cow position: | chr11:71294748-71294924 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 70 |
| Conread position: | 78-254 |
| Cow position: | chr11:54264953-54265125 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 78-255 |
| Cow position: | chr11:31206202-31206380 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 78-257 |
| Cow position: | chr11:77820033-77819855 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 137 |
| Conread position: | 84-254 |
| Cow position: | chr11:35251737-35251569 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 47 |
| Conread position: | 85-254 |
| Cow position: | chr11:84729190-84729356 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 87-234 |
| Cow position: | chr11:55354435-55354286 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 87-237 |
| Cow position: | chr11:48168710-48168571 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 87-251 |
| Cow position: | chr11:18370851-18371020 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 111 |
| Conread position: | 87-254 |
| Cow position: | chr11:79848240-79848080 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 87-255 |
| Cow position: | chr11:33934766-33934612 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 87-256 |
| Cow position: | chr11:80002981-80003151 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 87-260 |
| Cow position: | chr11:77193782-77193608 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 88-254 |
| Cow position: | chr11:29014339-29014506 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 92-204 |
| Cow position: | chr11:74225729-74225840 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 93-252 |
| Cow position: | chr11:11595095-11595255 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 93-254 |
| Cow position: | chr11:18153988-18153827 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 93-254 |
| Cow position: | chr11:81337018-81336864 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 28, 123 |
| Conread position: | 93-259 |
| Cow position: | chr11:21544310-21544471 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 20 |
| Conread position: | 94-242 |
| Cow position: | chr11:16793680-16793532 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 94-251 |
| Cow position: | chr11:62423827-62423670 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 94-257 |
| Cow position: | chr11:26585916-26586077 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 33, 80 |
| Conread position: | 104-258 |
| Cow position: | chr11:27666216-27666060 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 106-257 |
| Cow position: | chr11:45430315-45430464 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 71 |
Show alignments to all cow chromosomes.