Cow genome map
| Conread name: | rcmu22_b16.y1 |
| Conread position: | 41-254 |
| Cow position: | chr3:40736732-40736519 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 35, 91 |
| Conread position: | 68-252 |
| Cow position: | chr3:4555742-4555556 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 78-254 |
| Cow position: | chr3:15329495-15329319 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 78-254 |
| Cow position: | chr3:35144734-35144909 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 141 |
| Conread position: | 79-232 |
| Cow position: | chr3:62824554-62824401 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 143 |
| Conread position: | 84-229 |
| Cow position: | chr3:70876384-70876529 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 84-253 |
| Cow position: | chr3:63259869-63260031 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 84-262 |
| Cow position: | chr3:78709959-78710134 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 86-254 |
| Cow position: | chr3:73827010-73827178 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 87-210 |
| Cow position: | chr3:54570567-54570691 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 87-254 |
| Cow position: | chr3:31924670-31924502 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 88-253 |
| Cow position: | chr3:7466811-7466641 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 88-255 |
| Cow position: | chr3:49841265-49841099 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 23, 83 |
| Conread position: | 91-255 |
| Cow position: | chr3:16622078-16621913 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 92-241 |
| Cow position: | chr3:58429339-58429189 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 92-255 |
| Cow position: | chr3:13478468-13478627 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 92-255 |
| Cow position: | chr3:22850750-22850590 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 93-255 |
| Cow position: | chr3:79139048-79138887 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 93-256 |
| Cow position: | chr3:24823909-24824075 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 94-245 |
| Cow position: | chr3:49635660-49635518 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 94-253 |
| Cow position: | chr3:46134942-46134781 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 94-255 |
| Cow position: | chr3:33468535-33468375 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 27, 121 |
| Conread position: | 96-252 |
| Cow position: | chr3:37808155-37807998 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 96-255 |
| Cow position: | chr3:64435880-64435721 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-254 |
| Cow position: | chr3:48858015-48858171 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 102-251 |
| Cow position: | chr3:47497772-47497922 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 53 |
| Conread position: | 112-255 |
| Cow position: | chr3:77065525-77065391 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 112-255 |
| Cow position: | chr3:77067448-77067314 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 115-254 |
| Cow position: | chr3:24646156-24646296 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 6, 16 |
| Conread position: | 125-255 |
| Cow position: | chr3:42957165-42957039 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.