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Cow genome map

           
Conread name:
           
rcmu25_l1.y1
        

               
Conread position:
               
68-421
               

               
Cow position:
               
chr17:17179939-17180293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
56, 66
               

               
Conread position:
               
80-418
               

               
Cow position:
               
chr17:9056798-9056453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
84-340
               

               
Cow position:
               
chr17:20810583-20810327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
110, 99
               

               
Conread position:
               
84-423
               

               
Cow position:
               
chr17:13601073-13600731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
87-416
               

               
Cow position:
               
chr17:8949058-8948723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
87-421
               

               
Cow position:
               
chr17:29025977-29026323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 97
               

               
Conread position:
               
89-322
               

               
Cow position:
               
chr17:32457656-32457425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
90-231
               

               
Cow position:
               
chr17:1353311-1353450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
90-420
               

               
Cow position:
               
chr17:14050290-14049963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 43
               

               
Conread position:
               
90-420
               

               
Cow position:
               
chr17:24994905-24995249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
91-421
               

               
Cow position:
               
chr17:18490451-18490781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 167
               

               
Conread position:
               
92-186
               

               
Cow position:
               
chr17:25160240-25160146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-344
               

               
Cow position:
               
chr17:22057108-22056861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
186, 58
               

               
Conread position:
               
92-421
               

               
Cow position:
               
chr17:15684427-15684752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 96
               

               
Conread position:
               
93-350
               

               
Cow position:
               
chr17:21755515-21755263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
93-417
               

               
Cow position:
               
chr17:31856586-31856917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 165
               

               
Conread position:
               
94-331
               

               
Cow position:
               
chr17:11156574-11156340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
94-353
               

               
Cow position:
               
chr17:9487221-9487470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
185, 43
               

               
Conread position:
               
94-421
               

               
Cow position:
               
chr17:21973217-21972878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 165
               

               
Conread position:
               
94-421
               

               
Cow position:
               
chr17:36864547-36864871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
95-344
               

               
Cow position:
               
chr17:34751489-34751238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
95-415
               

               
Cow position:
               
chr17:20780428-20780768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
143, 95
               

               
Conread position:
               
96-401
               

               
Cow position:
               
chr17:37699433-37699113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 159
               

               
Conread position:
               
96-418
               

               
Cow position:
               
chr17:33271764-33271425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 211
               

               
Conread position:
               
96-423
               

               
Cow position:
               
chr17:30359392-30359702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
183, 58
               

               
Conread position:
               
97-342
               

               
Cow position:
               
chr17:36331042-36330794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 163
               

               
Conread position:
               
97-344
               

               
Cow position:
               
chr17:12880520-12880761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
97-384
               

               
Cow position:
               
chr17:2810544-2810842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 274
               

               
Conread position:
               
97-417
               

               
Cow position:
               
chr17:16616738-16617045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
238, 50
               

               
Conread position:
               
97-419
               

               
Cow position:
               
chr17:21738956-21738618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 163
               

               
Conread position:
               
98-231
               

               
Cow position:
               
chr17:5246818-5246947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 39
               

               
Conread position:
               
98-249
               

               
Cow position:
               
chr17:24550097-24550248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
98-255
               

               
Cow position:
               
chr17:267664-267508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
98-285
               

               
Cow position:
               
chr17:21917953-21917766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 128
               

               
Conread position:
               
98-315
               

               
Cow position:
               
chr17:21628400-21628615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
181, 86
               

               
Conread position:
               
98-359
               

               
Cow position:
               
chr17:33411099-33410824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
98-379
               

               
Cow position:
               
chr17:36203569-36203280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
98-415
               

               
Cow position:
               
chr17:7571022-7571348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
98-418
               

               
Cow position:
               
chr17:5730835-5731163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
98-418
               

               
Cow position:
               
chr17:17410211-17410546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 163
               

               
Conread position:
               
98-418
               

               
Cow position:
               
chr17:22775295-22775616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
63, 71
               

               
Conread position:
               
98-419
               

               
Cow position:
               
chr17:38614879-38615209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr17:23063635-23063969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr17:24490448-24490788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 171
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr17:32027535-32027200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 159
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr17:8598185-8597861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
97, 79
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr17:24149104-24149437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 79
               

               
Conread position:
               
98-422
               

               
Cow position:
               
chr17:11618506-11618836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 79
               

               
Conread position:
               
98-422
               

               
Cow position:
               
chr17:21293120-21292788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
98-423
               

               
Cow position:
               
chr17:923799-924108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
98-423
               

               
Cow position:
               
chr17:10528814-10528480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
79, 164
               

               
Conread position:
               
99-250
               

               
Cow position:
               
chr17:9778169-9778315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
99-285
               

               
Cow position:
               
chr17:14060853-14060667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 128
               

               
Conread position:
               
99-353
               

               
Cow position:
               
chr17:8544229-8544479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 87
               

               
Conread position:
               
99-381
               

               
Cow position:
               
chr17:25594781-25594489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
36, 170
               

               
Conread position:
               
99-382
               

               
Cow position:
               
chr17:30529618-30529344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
99-384
               

               
Cow position:
               
chr17:1113812-1114106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
180, 79
               

               
Conread position:
               
99-384
               

               
Cow position:
               
chr17:6329035-6329320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 158
               

               
Conread position:
               
99-384
               

               
Cow position:
               
chr17:24928398-24928686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
180, 87
               

               
Conread position:
               
99-384
               

               
Cow position:
               
chr17:34079180-34078900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
183, 53
               

               
Conread position:
               
99-414
               

               
Cow position:
               
chr17:18146106-18146432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
99-415
               

               
Cow position:
               
chr17:30665193-30665510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 88
               

               
Conread position:
               
99-419
               

               
Cow position:
               
chr17:25189209-25189533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 99
               

               
Conread position:
               
99-420
               

               
Cow position:
               
chr17:1035676-1035346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 155
               

               
Conread position:
               
99-421
               

               
Cow position:
               
chr17:15664592-15664924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
99-422
               

               
Cow position:
               
chr17:5144243-5143923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
96, 163
               

               
Conread position:
               
100-234
               

               
Cow position:
               
chr17:5895987-5895855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
100-236
               

               
Cow position:
               
chr17:1295647-1295513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
100-236
               

               
Cow position:
               
chr17:11921359-11921216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
100-246
               

               
Cow position:
               
chr17:3471343-3471487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
100-251
               

               
Cow position:
               
chr17:44232792-44232639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
100-253
               

               
Cow position:
               
chr17:32950196-32950350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
100-255
               

               
Cow position:
               
chr17:17266971-17266814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
100-256
               

               
Cow position:
               
chr17:6624181-6624334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
100-256
               

               
Cow position:
               
chr17:28539952-28540108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
100-327
               

               
Cow position:
               
chr17:5688435-5688223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
100-333
               

               
Cow position:
               
chr17:8690519-8690296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
179, 148
               

               
Conread position:
               
100-334
               

               
Cow position:
               
chr17:41029877-41030094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
179, 75
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr17:27203121-27202883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 84
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr17:27048082-27048323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 29
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr17:39857316-39857553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
86, 64
               

               
Conread position:
               
100-384
               

               
Cow position:
               
chr17:6566390-6566692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
100-384
               

               
Cow position:
               
chr17:16371178-16371466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
95, 84
               

               
Conread position:
               
100-402
               

               
Cow position:
               
chr17:18860800-18860515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
95, 87
               

               
Conread position:
               
100-403
               

               
Cow position:
               
chr17:29472392-29472687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
100-404
               

               
Cow position:
               
chr17:20993117-20992807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 135
               

               
Conread position:
               
100-404
               

               
Cow position:
               
chr17:40741570-40741885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 88
               

               
Conread position:
               
100-411
               

               
Cow position:
               
chr17:26230873-26231203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
91, 157
               

               
Conread position:
               
100-412
               

               
Cow position:
               
chr17:20932252-20932569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 160
               

               
Conread position:
               
100-412
               

               
Cow position:
               
chr17:24559216-24559532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
111, 79
               

               
Conread position:
               
100-412
               

               
Cow position:
               
chr17:25916819-25917126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
100-413
               

               
Cow position:
               
chr17:27184019-27183702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
100-415
               

               
Cow position:
               
chr17:25342817-25342498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
179, 80
               

               
Conread position:
               
100-416
               

               
Cow position:
               
chr17:11281184-11280847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
100-416
               

               
Cow position:
               
chr17:34948561-34948881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
125, 80
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr17:3353804-3354114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 140
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr17:22564104-22564422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
89, 181
               

               
Conread position:
               
100-419
               

               
Cow position:
               
chr17:2275397-2275710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
100-420
               

               
Cow position:
               
chr17:24077326-24077635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 114
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr17:11832196-11831869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr17:21489701-21489385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 123
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr17:21959764-21959435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 90
               

               
Conread position:
               
100-422
               

               
Cow position:
               
chr17:20848445-20848778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 61
               

               
Conread position:
               
100-423
               

               
Cow position:
               
chr17:7803251-7802922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
96, 37
               

               
Conread position:
               
100-423
               

               
Cow position:
               
chr17:31481113-31480779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
157, 68
               

               
Conread position:
               
100-423
               

               
Cow position:
               
chr17:40771759-40772081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 93
               

               
Conread position:
               
101-248
               

               
Cow position:
               
chr17:24761304-24761158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
101-251
               

               
Cow position:
               
chr17:12059171-12059020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 140
               

               
Conread position:
               
101-309
               

               
Cow position:
               
chr17:31231188-31230991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
178, 37
               

               
Conread position:
               
101-311
               

               
Cow position:
               
chr17:23798202-23798416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
88, 157
               

               
Conread position:
               
101-328
               

               
Cow position:
               
chr17:9565233-9565451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
178, 47
               

               
Conread position:
               
101-331
               

               
Cow position:
               
chr17:12591090-12591328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 162
               

               
Conread position:
               
101-334
               

               
Cow position:
               
chr17:25502033-25502267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
80, 150
               

               
Conread position:
               
101-335
               

               
Cow position:
               
chr17:21495300-21495529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 133
               

               
Conread position:
               
101-336
               

               
Cow position:
               
chr17:6848729-6848953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
178, 67
               

               
Conread position:
               
101-339
               

               
Cow position:
               
chr17:7136906-7137149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
101-340
               

               
Cow position:
               
chr17:21335771-21335530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
101-340
               

               
Cow position:
               
chr17:38363063-38362833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
101-341
               

               
Cow position:
               
chr17:23883333-23883105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
178, 63
               

               
Conread position:
               
101-343
               

               
Cow position:
               
chr17:8079240-8079478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
178, 82
               

               
Conread position:
               
101-343
               

               
Cow position:
               
chr17:9117570-9117808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
178, 85
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr17:15299951-15299713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
85, 133
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr17:15340829-15340585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr17:39715081-39715323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
89, 159
               

               
Conread position:
               
101-348
               

               
Cow position:
               
chr17:23517019-23516772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
178, 153
               

               
Conread position:
               
101-354
               

               
Cow position:
               
chr17:17060757-17060506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 114
               

               
Conread position:
               
101-359
               

               
Cow position:
               
chr17:979232-978988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
178, 83
               

               
Conread position:
               
101-374
               

               
Cow position:
               
chr17:18495597-18495321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 154
               

               
Conread position:
               
101-400
               

               
Cow position:
               
chr17:5423147-5422851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
101-404
               

               
Cow position:
               
chr17:1466506-1466185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
88, 133
               

               
Conread position:
               
101-404
               

               
Cow position:
               
chr17:7132527-7132193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
90, 165
               

               
Conread position:
               
101-404
               

               
Cow position:
               
chr17:7142789-7143088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 60
               

               
Conread position:
               
101-404
               

               
Cow position:
               
chr17:43717391-43717109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
101-407
               

               
Cow position:
               
chr17:21115027-21114720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
91, 47
               

               
Conread position:
               
101-411
               

               
Cow position:
               
chr17:4786572-4786242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
178, 89
               

               
Conread position:
               
101-413
               

               
Cow position:
               
chr17:22032767-22032447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
165, 80
               

               
Conread position:
               
101-413
               

               
Cow position:
               
chr17:24587545-24587864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
90, 160
               

               
Conread position:
               
101-414
               

               
Cow position:
               
chr17:14652857-14652543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
98, 78
               

               
Conread position:
               
101-414
               

               
Cow position:
               
chr17:33933825-33933506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
88, 123
               

               
Conread position:
               
101-415
               

               
Cow position:
               
chr17:17193417-17193733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
101-416
               

               
Cow position:
               
chr17:8837026-8836707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
101-416
               

               
Cow position:
               
chr17:25514200-25513874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 117
               

               
Conread position:
               
101-417
               

               
Cow position:
               
chr17:32278982-32278660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
165, 88
               

               
Conread position:
               
101-417
               

               
Cow position:
               
chr17:32280590-32280912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
165, 88
               

               
Conread position:
               
101-418
               

               
Cow position:
               
chr17:11215968-11215647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 151
               

               
Conread position:
               
101-418
               

               
Cow position:
               
chr17:14025989-14025661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
101-419
               

               
Cow position:
               
chr17:908668-908985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
182, 28
               

               
Conread position:
               
101-419
               

               
Cow position:
               
chr17:31037457-31037131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 158
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr17:20884446-20884773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 155
               

               
Conread position:
               
101-421
               

               
Cow position:
               
chr17:1469300-1469614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
101-421
               

               
Cow position:
               
chr17:17682979-17682665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
101-422
               

               
Cow position:
               
chr17:10561553-10561865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr17:6423684-6424005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 158
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr17:12946435-12946109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr17:13922402-13922733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 166
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr17:14033717-14033391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr17:20234152-20234447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
178, 87
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr17:21743861-21744186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr17:27058632-27058299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
99, 83
               

               
Conread position:
               
102-228
               

               
Cow position:
               
chr17:21312887-21312759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
102-240
               

               
Cow position:
               
chr17:42347301-42347160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
86, 64
               

               
Conread position:
               
102-256
               

               
Cow position:
               
chr17:41290096-41289944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
102-284
               

               
Cow position:
               
chr17:7654532-7654347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
102-305
               

               
Cow position:
               
chr17:3781968-3782171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
102-328
               

               
Cow position:
               
chr17:7760541-7760322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
177, 64
               

               
Conread position:
               
102-338
               

               
Cow position:
               
chr17:43141791-43141548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
102-343
               

               
Cow position:
               
chr17:38200836-38200597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
143, 84
               

               
Conread position:
               
102-344
               

               
Cow position:
               
chr17:20874318-20874562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
102-356
               

               
Cow position:
               
chr17:24580373-24580113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
21, 155
               

               
Conread position:
               
102-384
               

               
Cow position:
               
chr17:18419602-18419893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
132, 85
               

               
Conread position:
               
102-401
               

               
Cow position:
               
chr17:25097387-25097672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 88
               

               
Conread position:
               
102-413
               

               
Cow position:
               
chr17:10459014-10458693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
102-413
               

               
Cow position:
               
chr17:11397595-11397907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 36
               

               
Conread position:
               
102-414
               

               
Cow position:
               
chr17:12108730-12109049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
177, 75
               

               
Conread position:
               
102-414
               

               
Cow position:
               
chr17:13244117-13243812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
102-414
               

               
Cow position:
               
chr17:13940394-13940077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
177, 63
               

               
Conread position:
               
102-417
               

               
Cow position:
               
chr17:22127851-22128167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
102-418
               

               
Cow position:
               
chr17:32348997-32349309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
102-422
               

               
Cow position:
               
chr17:12536544-12536225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 157
               

               
Conread position:
               
102-422
               

               
Cow position:
               
chr17:29292443-29292140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
102-423
               

               
Cow position:
               
chr17:9853913-9854232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
177, 35
               

               
Conread position:
               
102-423
               

               
Cow position:
               
chr17:27795570-27795905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 165
               

               
Conread position:
               
103-348
               

               
Cow position:
               
chr17:25718035-25718273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
176, 59
               

               
Conread position:
               
103-401
               

               
Cow position:
               
chr17:5350201-5349895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
103-408
               

               
Cow position:
               
chr17:10446843-10447148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
103-413
               

               
Cow position:
               
chr17:17222270-17222584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 65
               

               
Conread position:
               
103-414
               

               
Cow position:
               
chr17:42419649-42419946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
176, 59
               

               
Conread position:
               
103-419
               

               
Cow position:
               
chr17:18720524-18720206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 162
               

               
Conread position:
               
103-420
               

               
Cow position:
               
chr17:26233903-26233580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
103-423
               

               
Cow position:
               
chr17:40673308-40673623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
104-345
               

               
Cow position:
               
chr17:5900290-5900537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
104-361
               

               
Cow position:
               
chr17:24752390-24752144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
173, 57
               

               
Conread position:
               
104-397
               

               
Cow position:
               
chr17:11215306-11215009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 149
               

               
Conread position:
               
104-421
               

               
Cow position:
               
chr17:27730466-27730794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 155
               

               
Conread position:
               
104-423
               

               
Cow position:
               
chr17:25815527-25815847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
104-423
               

               
Cow position:
               
chr17:36791058-36791375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 137
               

               
Conread position:
               
105-402
               

               
Cow position:
               
chr17:2034459-2034728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
280, 32
               

               
Conread position:
               
105-421
               

               
Cow position:
               
chr17:1256575-1256250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
105-421
               

               
Cow position:
               
chr17:7697980-7698294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
105-421
               

               
Cow position:
               
chr17:32138492-32138168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
174, 45
               

               
Conread position:
               
106-422
               

               
Cow position:
               
chr17:33275823-33275509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 146
               

               
Conread position:
               
106-423
               

               
Cow position:
               
chr17:9770439-9770755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
83, 125
               

               
Conread position:
               
106-423
               

               
Cow position:
               
chr17:20157534-20157859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
108-340
               

               
Cow position:
               
chr17:38263563-38263326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
79, 151
               

               
Conread position:
               
108-409
               

               
Cow position:
               
chr17:29080474-29080771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
108-418
               

               
Cow position:
               
chr17:26448471-26448789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
109-345
               

               
Cow position:
               
chr17:21680695-21680947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
109-419
               

               
Cow position:
               
chr17:12289485-12289164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
111-338
               

               
Cow position:
               
chr17:14848604-14848387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
82, 38
               

               
Conread position:
               
111-419
               

               
Cow position:
               
chr17:6936741-6936431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
111-421
               

               
Cow position:
               
chr17:21003895-21003582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 149
               

               
Conread position:
               
111-423
               

               
Cow position:
               
chr17:11278097-11277777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
84, 147
               

               
Conread position:
               
111-423
               

               
Cow position:
               
chr17:34791133-34790814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
112-401
               

               
Cow position:
               
chr17:26789360-26789643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
113-328
               

               
Cow position:
               
chr17:30539317-30539119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
166, 73
               

               
Conread position:
               
113-340
               

               
Cow position:
               
chr17:30718483-30718255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
113-341
               

               
Cow position:
               
chr17:40289060-40288837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
166, 55
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr17:2662359-2662589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
113-345
               

               
Cow position:
               
chr17:4683282-4683517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
74, 143
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr17:9746450-9746682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
77, 124
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr17:32273751-32273516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
113-384
               

               
Cow position:
               
chr17:18920414-18920161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
176, 24
               

               
Conread position:
               
113-401
               

               
Cow position:
               
chr17:10432041-10431736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
153, 76
               

               
Conread position:
               
113-404
               

               
Cow position:
               
chr17:11101865-11101587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
166, 77
               

               
Conread position:
               
113-418
               

               
Cow position:
               
chr17:14003753-14004069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
113-421
               

               
Cow position:
               
chr17:1025885-1025585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
163, 59
               

               
Conread position:
               
113-423
               

               
Cow position:
               
chr17:9824604-9824918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
166, 143
               

               
Conread position:
               
113-423
               

               
Cow position:
               
chr17:11664653-11664326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
113-423
               

               
Cow position:
               
chr17:21806514-21806199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 24
               

               
Conread position:
               
113-423
               

               
Cow position:
               
chr17:24973887-24974193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
113-423
               

               
Cow position:
               
chr17:36814295-36814615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 146
               

               
Conread position:
               
114-418
               

               
Cow position:
               
chr17:40638885-40639193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
114-421
               

               
Cow position:
               
chr17:26000052-26000367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 140
               

               
Conread position:
               
115-320
               

               
Cow position:
               
chr17:22245929-22246138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
164, 77
               

               
Conread position:
               
115-423
               

               
Cow position:
               
chr17:4213685-4213988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
164, 11
               

               
Conread position:
               
116-402
               

               
Cow position:
               
chr17:7590519-7590231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
163, 21
               

               
Conread position:
               
117-402
               

               
Cow position:
               
chr17:37816250-37815961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
162, 17
               

               
Conread position:
               
117-414
               

               
Cow position:
               
chr17:11995092-11994779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
94, 141
               

               
Conread position:
               
117-421
               

               
Cow position:
               
chr17:11839655-11839971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
118-343
               

               
Cow position:
               
chr17:25796395-25796171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
118-413
               

               
Cow position:
               
chr17:9966087-9965782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
118-414
               

               
Cow position:
               
chr17:20800757-20801055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
118-414
               

               
Cow position:
               
chr17:21599740-21599439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
118-417
               

               
Cow position:
               
chr17:5224341-5224622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
70, 115
               

               
Conread position:
               
118-421
               

               
Cow position:
               
chr17:25126292-25126593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
118-423
               

               
Cow position:
               
chr17:25117831-25118137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
161, 67
               

               
Conread position:
               
118-423
               

               
Cow position:
               
chr17:36275278-36275587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 57
               

               
Conread position:
               
119-343
               

               
Cow position:
               
chr17:39412559-39412341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
121-283
               

               
Cow position:
               
chr17:3872482-3872643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
121-301
               

               
Cow position:
               
chr17:14762176-14761997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
121-340
               

               
Cow position:
               
chr17:16158434-16158652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
158, 135
               

               
Conread position:
               
121-344
               

               
Cow position:
               
chr17:38832986-38833210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
105, 68
               

               
Conread position:
               
121-384
               

               
Cow position:
               
chr17:21434784-21434520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 107
               

               
Conread position:
               
121-402
               

               
Cow position:
               
chr17:5514703-5514986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
121-404
               

               
Cow position:
               
chr17:11296583-11296870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
68, 144
               

               
Conread position:
               
121-404
               

               
Cow position:
               
chr17:20335608-20335877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
264, 69
               

               
Conread position:
               
121-413
               

               
Cow position:
               
chr17:1562828-1562550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
158, 45
               

               
Conread position:
               
121-414
               

               
Cow position:
               
chr17:40694496-40694192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 137
               

               
Conread position:
               
121-415
               

               
Cow position:
               
chr17:24883624-24883327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 67
               

               
Conread position:
               
122-310
               

               
Cow position:
               
chr17:36093947-36094136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 113
               

               
Conread position:
               
122-331
               

               
Cow position:
               
chr17:7205356-7205575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 145
               

               
Conread position:
               
122-334
               

               
Cow position:
               
chr17:36500749-36500959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
157, 68
               

               
Conread position:
               
122-344
               

               
Cow position:
               
chr17:21325277-21325499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
123-404
               

               
Cow position:
               
chr17:25901142-25901439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 136
               

               
Conread position:
               
123-411
               

               
Cow position:
               
chr17:7693009-7693308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 75
               

               
Conread position:
               
125-380
               

               
Cow position:
               
chr17:12219989-12219742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
64, 93
               

               
Conread position:
               
125-419
               

               
Cow position:
               
chr17:5288115-5288410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
125-422
               

               
Cow position:
               
chr17:31465303-31465010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
126-379
               

               
Cow position:
               
chr17:5011798-5012044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
126-405
               

               
Cow position:
               
chr17:34595889-34596160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
126-415
               

               
Cow position:
               
chr17:32419165-32418874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
126-419
               

               
Cow position:
               
chr17:22051644-22051344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
60, 85
               

               
Conread position:
               
126-419
               

               
Cow position:
               
chr17:39606378-39606668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
127-374
               

               
Cow position:
               
chr17:1493200-1492948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
128-344
               

               
Cow position:
               
chr17:22017136-22016922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
57, 6
               

               
Conread position:
               
128-369
               

               
Cow position:
               
chr17:18109135-18108893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
128-414
               

               
Cow position:
               
chr17:25709654-25709956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 138
               

               
Conread position:
               
128-421
               

               
Cow position:
               
chr17:40393961-40394268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
129-414
               

               
Cow position:
               
chr17:20022564-20022272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
130-416
               

               
Cow position:
               
chr17:26513139-26513434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 128
               

               
Conread position:
               
130-417
               

               
Cow position:
               
chr17:33793117-33793397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
133-349
               

               
Cow position:
               
chr17:26730654-26730441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 46
               

               
Conread position:
               
133-415
               

               
Cow position:
               
chr17:32471829-32471547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
47, 134
               

               
Conread position:
               
133-419
               

               
Cow position:
               
chr17:35051562-35051867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
71, 46
               

               
Conread position:
               
135-421
               

               
Cow position:
               
chr17:4106035-4105743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
138-266
               

               
Cow position:
               
chr17:5733506-5733380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
138-401
               

               
Cow position:
               
chr17:1063140-1063396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
138-412
               

               
Cow position:
               
chr17:30728471-30728747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
138-416
               

               
Cow position:
               
chr17:29356274-29355999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
141, 26
               

               
Conread position:
               
138-419
               

               
Cow position:
               
chr17:6318907-6318621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
138-419
               

               
Cow position:
               
chr17:24787063-24786778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
138-421
               

               
Cow position:
               
chr17:28468090-28468373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
138-422
               

               
Cow position:
               
chr17:21039524-21039805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
141, 10
               

               
Conread position:
               
138-422
               

               
Cow position:
               
chr17:25800922-25800634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 122
               

               
Conread position:
               
138-422
               

               
Cow position:
               
chr17:33155195-33154908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
138-423
               

               
Cow position:
               
chr17:32989436-32989723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
138-423
               

               
Cow position:
               
chr17:32993664-32993377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 82
               

               
Conread position:
               
139-378
               

               
Cow position:
               
chr17:14249045-14248811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
139-423
               

               
Cow position:
               
chr17:28982140-28982428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
140-399
               

               
Cow position:
               
chr17:949937-950201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
140-402
               

               
Cow position:
               
chr17:18818530-18818791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
140-413
               

               
Cow position:
               
chr17:33067598-33067327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
195, 55
               

               
Conread position:
               
140-421
               

               
Cow position:
               
chr17:1634529-1634245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
140-421
               

               
Cow position:
               
chr17:12306436-12306152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
140-421
               

               
Cow position:
               
chr17:29961616-29961902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
141-412
               

               
Cow position:
               
chr17:44147008-44146734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
141-416
               

               
Cow position:
               
chr17:16446472-16446183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
142-423
               

               
Cow position:
               
chr17:23280893-23280607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
143-421
               

               
Cow position:
               
chr17:25885787-25886080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 5
               

               
Conread position:
               
144-270
               

               
Cow position:
               
chr17:25485741-25485615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
144-345
               

               
Cow position:
               
chr17:28814533-28814324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
44, 116
               

               
Conread position:
               
144-415
               

               
Cow position:
               
chr17:26757496-26757201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 124
               

               
Conread position:
               
144-416
               

               
Cow position:
               
chr17:18201724-18202005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
135, 27
               

               
Conread position:
               
144-421
               

               
Cow position:
               
chr17:9940649-9940943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
40, 257
               

               
Conread position:
               
144-421
               

               
Cow position:
               
chr17:44108182-44107921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
145-344
               

               
Cow position:
               
chr17:21922666-21922466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
145-405
               

               
Cow position:
               
chr17:24120125-24119859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
145-412
               

               
Cow position:
               
chr17:9950697-9950417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
145-416
               

               
Cow position:
               
chr17:32333125-32332848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
145-418
               

               
Cow position:
               
chr17:35149561-35149282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
146-341
               

               
Cow position:
               
chr17:37482098-37481908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
133, 33
               

               
Conread position:
               
146-413
               

               
Cow position:
               
chr17:18267223-18267501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
146-418
               

               
Cow position:
               
chr17:25511214-25511487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
133, 62
               

               
Conread position:
               
147-285
               

               
Cow position:
               
chr17:32265517-32265383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
147-331
               

               
Cow position:
               
chr17:4891393-4891209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
132, 53
               

               
Conread position:
               
147-401
               

               
Cow position:
               
chr17:20199371-20199125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
148-413
               

               
Cow position:
               
chr17:22189408-22189672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
131, 30
               

               
Conread position:
               
149-404
               

               
Cow position:
               
chr17:27303987-27303749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
150-332
               

               
Cow position:
               
chr17:21604386-21604581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
129, 36
               

               
Conread position:
               
151-349
               

               
Cow position:
               
chr17:9911730-9911929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
151-415
               

               
Cow position:
               
chr17:5898557-5898282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
151-420
               

               
Cow position:
               
chr17:12325790-12325522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
151-423
               

               
Cow position:
               
chr17:29995465-29995185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
46, 110
               

               
Conread position:
               
152-404
               

               
Cow position:
               
chr17:40312681-40312930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
137, 8
               

               
Conread position:
               
153-418
               

               
Cow position:
               
chr17:12091849-12091588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 116
               

               
Conread position:
               
153-423
               

               
Cow position:
               
chr17:19783035-19783306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
154-312
               

               
Cow position:
               
chr17:7577566-7577732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
154-422
               

               
Cow position:
               
chr17:40384228-40383957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
154-423
               

               
Cow position:
               
chr17:8815166-8815438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
155-421
               

               
Cow position:
               
chr17:25584216-25584492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 96
               

               
Conread position:
               
157-310
               

               
Cow position:
               
chr17:7851066-7851220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
122, 99
               

               
Conread position:
               
157-418
               

               
Cow position:
               
chr17:25473301-25473035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
122, 102
               

               
Conread position:
               
158-420
               

               
Cow position:
               
chr17:5421655-5421928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
158-420
               

               
Cow position:
               
chr17:41839810-41840074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 100
               

               
Conread position:
               
160-340
               

               
Cow position:
               
chr17:34836152-34836334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 99
               

               
Conread position:
               
162-384
               

               
Cow position:
               
chr17:5013093-5012860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 56
               

               
Conread position:
               
166-414
               

               
Cow position:
               
chr17:16868281-16868034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 89
               

               
Conread position:
               
168-423
               

               
Cow position:
               
chr17:35193833-35193567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 36
               

               
Conread position:
               
169-335
               

               
Cow position:
               
chr17:3067865-3067701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
173-416
               

               
Cow position:
               
chr17:24841692-24841940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
175-421
               

               
Cow position:
               
chr17:20905101-20904858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
176-420
               

               
Cow position:
               
chr17:25930542-25930301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 84
               

               
Conread position:
               
179-353
               

               
Cow position:
               
chr17:35334098-35334271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
100, 11
               

               
Conread position:
               
179-419
               

               
Cow position:
               
chr17:10023053-10023302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
180-348
               

               
Cow position:
               
chr17:21788660-21788489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
180-413
               

               
Cow position:
               
chr17:15354934-15355174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
182-423
               

               
Cow position:
               
chr17:9509991-9509744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
183-404
               

               
Cow position:
               
chr17:32554041-32553819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
185-341
               

               
Cow position:
               
chr17:21709926-21709763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
185-419
               

               
Cow position:
               
chr17:9935800-9935558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 69
               

               
Conread position:
               
186-384
               

               
Cow position:
               
chr17:25466996-25467193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
186-413
               

               
Cow position:
               
chr17:4817536-4817770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
93, 67
               

               
Conread position:
               
186-423
               

               
Cow position:
               
chr17:34860381-34860623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
63, 165
               

               
Conread position:
               
186-423
               

               
Cow position:
               
chr17:40276747-40276987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
187-339
               

               
Cow position:
               
chr17:10769502-10769348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
187-378
               

               
Cow position:
               
chr17:37129208-37129415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
187-423
               

               
Cow position:
               
chr17:17034958-17035197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
188-399
               

               
Cow position:
               
chr17:24862468-24862681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 68
               

               
Conread position:
               
190-328
               

               
Cow position:
               
chr17:1350462-1350602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
190-331
               

               
Cow position:
               
chr17:12342469-12342327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
190-331
               

               
Cow position:
               
chr17:33913564-33913421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
190-384
               

               
Cow position:
               
chr17:32143101-32143297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
190-421
               

               
Cow position:
               
chr17:26072749-26072510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
191-330
               

               
Cow position:
               
chr17:4833515-4833376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
191-348
               

               
Cow position:
               
chr17:11224117-11224270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 63
               

               
Conread position:
               
191-412
               

               
Cow position:
               
chr17:27440189-27440416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
88, 61
               

               
Conread position:
               
191-418
               

               
Cow position:
               
chr17:29245456-29245679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
191-419
               

               
Cow position:
               
chr17:40355271-40355507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
191-423
               

               
Cow position:
               
chr17:30713358-30713597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
192-401
               

               
Cow position:
               
chr17:8986592-8986373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr17:25587442-25587223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
192-417
               

               
Cow position:
               
chr17:26562129-26561893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 89
               

               
Conread position:
               
192-423
               

               
Cow position:
               
chr17:1463316-1463078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
193-327
               

               
Cow position:
               
chr17:12288809-12288944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
193-379
               

               
Cow position:
               
chr17:31990948-31991142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
193-401
               

               
Cow position:
               
chr17:6004818-6005028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
193-421
               

               
Cow position:
               
chr17:25875411-25875643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
194-399
               

               
Cow position:
               
chr17:4607245-4607464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
194-411
               

               
Cow position:
               
chr17:43957676-43957899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
194-414
               

               
Cow position:
               
chr17:34836092-34835883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
194-423
               

               
Cow position:
               
chr17:21718980-21718746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
195-423
               

               
Cow position:
               
chr17:22076186-22076423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
196-414
               

               
Cow position:
               
chr17:24877122-24877347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
83, 65
               

               
Conread position:
               
196-423
               

               
Cow position:
               
chr17:7959198-7959430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
197-341
               

               
Cow position:
               
chr17:25193508-25193363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
82, 59
               

               
Conread position:
               
198-341
               

               
Cow position:
               
chr17:5719891-5720035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
198-344
               

               
Cow position:
               
chr17:22074478-22074331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
199-421
               

               
Cow position:
               
chr17:27292436-27292205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
199-423
               

               
Cow position:
               
chr17:18674008-18673787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
200-348
               

               
Cow position:
               
chr17:37430483-37430334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
200-423
               

               
Cow position:
               
chr17:20929263-20929495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
202-404
               

               
Cow position:
               
chr17:21777743-21777959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
202-416
               

               
Cow position:
               
chr17:28465447-28465670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
203-421
               

               
Cow position:
               
chr17:13414344-13414117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
204-410
               

               
Cow position:
               
chr17:20359136-20359353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
204-416
               

               
Cow position:
               
chr17:33653664-33653450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
210-413
               

               
Cow position:
               
chr17:10508402-10508193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
211-409
               

               
Cow position:
               
chr17:31754743-31754536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 48
               

               
Conread position:
               
215-421
               

               
Cow position:
               
chr17:3320185-3320385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
216-414
               

               
Cow position:
               
chr17:41380466-41380276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
216-415
               

               
Cow position:
               
chr17:10410685-10410873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
169, 42
               

               
Conread position:
               
217-422
               

               
Cow position:
               
chr17:9078182-9077963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
219-418
               

               
Cow position:
               
chr17:3364632-3364835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
220-348
               

               
Cow position:
               
chr17:35542128-35541999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
220-357
               

               
Cow position:
               
chr17:968926-969061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
221-402
               

               
Cow position:
               
chr17:5344660-5344848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
221-403
               

               
Cow position:
               
chr17:10414541-10414723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
221-414
               

               
Cow position:
               
chr17:39963920-39964119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
221-423
               

               
Cow position:
               
chr17:15883714-15883925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
222-423
               

               
Cow position:
               
chr17:26225071-26225279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
223-414
               

               
Cow position:
               
chr17:11985833-11985644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
226-343
               

               
Cow position:
               
chr17:42346971-42346853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
226-412
               

               
Cow position:
               
chr17:12887407-12887592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 33
               

               
Conread position:
               
226-418
               

               
Cow position:
               
chr17:11056113-11055922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
226-423
               

               
Cow position:
               
chr17:6786984-6787190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
227-421
               

               
Cow position:
               
chr17:25122195-25121999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
227-423
               

               
Cow position:
               
chr17:6318054-6317856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
228-414
               

               
Cow position:
               
chr17:28795933-28795739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
230-421
               

               
Cow position:
               
chr17:43323493-43323294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 28
               

               
Conread position:
               
233-420
               

               
Cow position:
               
chr17:7554205-7554016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
155, 22
               

               
Conread position:
               
234-414
               

               
Cow position:
               
chr17:19898946-19899142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 25
               

               
Conread position:
               
234-416
               

               
Cow position:
               
chr17:8723378-8723197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
234-418
               

               
Cow position:
               
chr17:11921109-11920916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
45, 25
               

               
Conread position:
               
234-423
               

               
Cow position:
               
chr17:7733062-7732867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
234-423
               

               
Cow position:
               
chr17:19471715-19471523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
234-423
               

               
Cow position:
               
chr17:36574067-36573869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
236-422
               

               
Cow position:
               
chr17:20913168-20913357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
237-420
               

               
Cow position:
               
chr17:10825539-10825724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
238-368
               

               
Cow position:
               
chr17:21323554-21323687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 25
               

               
Conread position:
               
239-343
               

               
Cow position:
               
chr17:10650174-10650278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
239-384
               

               
Cow position:
               
chr17:18776126-18775981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
239-399
               

               
Cow position:
               
chr17:8137466-8137628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
239-412
               

               
Cow position:
               
chr17:10016340-10016517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
239-413
               

               
Cow position:
               
chr17:10222149-10221967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
239-416
               

               
Cow position:
               
chr17:24987267-24987445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 20
               

               
Conread position:
               
239-421
               

               
Cow position:
               
chr17:21181512-21181702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
239-422
               

               
Cow position:
               
chr17:6761787-6761605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
239-422
               

               
Cow position:
               
chr17:20881748-20881566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
240-416
               

               
Cow position:
               
chr17:26183406-26183590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
241-383
               

               
Cow position:
               
chr17:18404509-18404366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
241-418
               

               
Cow position:
               
chr17:21363444-21363629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
241-421
               

               
Cow position:
               
chr17:21236585-21236773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
241-423
               

               
Cow position:
               
chr17:21678096-21677911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
242-419
               

               
Cow position:
               
chr17:26554587-26554762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
242-423
               

               
Cow position:
               
chr17:19544169-19543981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
6, 18
               

               
Conread position:
               
243-413
               

               
Cow position:
               
chr17:35921951-35922133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
243-423
               

               
Cow position:
               
chr17:5047994-5048180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
244-412
               

               
Cow position:
               
chr17:18708545-18708378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 15
               

               
Conread position:
               
244-416
               

               
Cow position:
               
chr17:35457750-35457574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
245-399
               

               
Cow position:
               
chr17:7154637-7154788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
246-414
               

               
Cow position:
               
chr17:30108507-30108671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
249-412
               

               
Cow position:
               
chr17:32978862-32978697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
250-418
               

               
Cow position:
               
chr17:6767189-6767011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
255-423
               

               
Cow position:
               
chr17:17782131-17782303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
256-402
               

               
Cow position:
               
chr17:24111525-24111374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
256-412
               

               
Cow position:
               
chr17:24030155-24030000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
258-384
               

               
Cow position:
               
chr17:3541787-3541916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
259-411
               

               
Cow position:
               
chr17:43971073-43970918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
259-423
               

               
Cow position:
               
chr17:24898280-24898455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
264-417
               

               
Cow position:
               
chr17:27606602-27606757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 75
               

               
Conread position:
               
265-414
               

               
Cow position:
               
chr17:14668588-14668746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
268-402
               

               
Cow position:
               
chr17:17822179-17822316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
269-412
               

               
Cow position:
               
chr17:31985851-31985709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
269-423
               

               
Cow position:
               
chr17:7864914-7865075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
277-421
               

               
Cow position:
               
chr17:35935258-35935408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
279-420
               

               
Cow position:
               
chr17:22223816-22223962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
288-423
               

               
Cow position:
               
chr17:20887130-20887275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
290-419
               

               
Cow position:
               
chr17:37513993-37513854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               
Show alignments to all cow chromosomes.