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Cow genome map

           
Conread name:
           
rcmu25_l1.y1
        

               
Conread position:
               
62-408
               

               
Cow position:
               
chr20:11008056-11008410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
79-419
               

               
Cow position:
               
chr20:11359726-11359390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
80-423
               

               
Cow position:
               
chr20:11548817-11548475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
199, 110
               

               
Conread position:
               
85-344
               

               
Cow position:
               
chr20:23506560-23506304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
194, 102
               

               
Conread position:
               
88-246
               

               
Cow position:
               
chr20:41403489-41403647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
88-418
               

               
Cow position:
               
chr20:41704078-41704410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
239, 99
               

               
Conread position:
               
89-251
               

               
Cow position:
               
chr20:5078113-5078273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
89-338
               

               
Cow position:
               
chr20:16491985-16492236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 168
               

               
Conread position:
               
89-413
               

               
Cow position:
               
chr20:5009651-5009974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
91-246
               

               
Cow position:
               
chr20:37357522-37357678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
91-305
               

               
Cow position:
               
chr20:24000882-24000666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
188, 165
               

               
Conread position:
               
92-344
               

               
Cow position:
               
chr20:31799278-31799034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
93-401
               

               
Cow position:
               
chr20:30119656-30119362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 94
               

               
Conread position:
               
93-413
               

               
Cow position:
               
chr20:15569028-15568720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 81
               

               
Conread position:
               
93-415
               

               
Cow position:
               
chr20:35145938-35146258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
93-418
               

               
Cow position:
               
chr20:5078541-5078883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 164
               

               
Conread position:
               
93-418
               

               
Cow position:
               
chr20:33067447-33067112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
94-414
               

               
Cow position:
               
chr20:13876785-13876466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
95, 40
               

               
Conread position:
               
94-421
               

               
Cow position:
               
chr20:17251634-17251969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 145
               

               
Conread position:
               
95-234
               

               
Cow position:
               
chr20:23936488-23936346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
95-285
               

               
Cow position:
               
chr20:32661976-32661777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 168
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr20:5385817-5385587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
183, 47
               

               
Conread position:
               
96-348
               

               
Cow position:
               
chr20:19751228-19751480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 90
               

               
Conread position:
               
96-421
               

               
Cow position:
               
chr20:11188878-11188572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 91
               

               
Conread position:
               
97-333
               

               
Cow position:
               
chr20:41627427-41627183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
91, 167
               

               
Conread position:
               
97-336
               

               
Cow position:
               
chr20:4332060-4332295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
182, 55
               

               
Conread position:
               
97-344
               

               
Cow position:
               
chr20:21714677-21714937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
96, 85
               

               
Conread position:
               
97-361
               

               
Cow position:
               
chr20:14917225-14917471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
181, 57
               

               
Conread position:
               
97-420
               

               
Cow position:
               
chr20:11340877-11340556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
182, 87
               

               
Conread position:
               
97-421
               

               
Cow position:
               
chr20:35741674-35742021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
38, 174
               

               
Conread position:
               
98-256
               

               
Cow position:
               
chr20:40256893-40257050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
98-285
               

               
Cow position:
               
chr20:19616411-19616601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
88, 161
               

               
Conread position:
               
98-342
               

               
Cow position:
               
chr20:29805739-29805492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 177
               

               
Conread position:
               
98-371
               

               
Cow position:
               
chr20:17100283-17100555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 160
               

               
Conread position:
               
98-372
               

               
Cow position:
               
chr20:22484785-22485060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 82
               

               
Conread position:
               
98-380
               

               
Cow position:
               
chr20:36010718-36010995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 81
               

               
Conread position:
               
98-381
               

               
Cow position:
               
chr20:8098207-8098496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
98-384
               

               
Cow position:
               
chr20:18551286-18551575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
98-413
               

               
Cow position:
               
chr20:13829190-13829502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
132, 36
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr20:3740075-3739759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
180, 53
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr20:19328324-19328647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
181, 79
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr20:20352992-20352660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr20:32523385-32523713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr20:33819142-33819479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 81
               

               
Conread position:
               
98-422
               

               
Cow position:
               
chr20:28819008-28818684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
98-423
               

               
Cow position:
               
chr20:4945323-4944998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 47
               

               
Conread position:
               
99-236
               

               
Cow position:
               
chr20:37272637-37272775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
99-271
               

               
Cow position:
               
chr20:10348670-10348845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
66, 157
               

               
Conread position:
               
99-323
               

               
Cow position:
               
chr20:21928829-21929053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
88, 80
               

               
Conread position:
               
99-335
               

               
Cow position:
               
chr20:9537060-9537292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
88, 153
               

               
Conread position:
               
99-344
               

               
Cow position:
               
chr20:14100509-14100266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
99-344
               

               
Cow position:
               
chr20:33439054-33438811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
37, 68
               

               
Conread position:
               
99-402
               

               
Cow position:
               
chr20:35192701-35192990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 96
               

               
Conread position:
               
99-413
               

               
Cow position:
               
chr20:29844974-29845298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 44
               

               
Conread position:
               
99-413
               

               
Cow position:
               
chr20:33435243-33434916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 212
               

               
Conread position:
               
99-413
               

               
Cow position:
               
chr20:34221405-34221725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
99-418
               

               
Cow position:
               
chr20:30710721-30710395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 77
               

               
Conread position:
               
99-421
               

               
Cow position:
               
chr20:6054592-6054257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 166
               

               
Conread position:
               
99-421
               

               
Cow position:
               
chr20:14759737-14759423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
180, 84
               

               
Conread position:
               
99-422
               

               
Cow position:
               
chr20:32512923-32513256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 158
               

               
Conread position:
               
100-248
               

               
Cow position:
               
chr20:27003809-27003652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
100-251
               

               
Cow position:
               
chr20:28831893-28832047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
100-312
               

               
Cow position:
               
chr20:28955775-28955564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
179, 50
               

               
Conread position:
               
100-334
               

               
Cow position:
               
chr20:15565902-15565670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
100-336
               

               
Cow position:
               
chr20:35797533-35797777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 155
               

               
Conread position:
               
100-344
               

               
Cow position:
               
chr20:6890641-6890877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
100-344
               

               
Cow position:
               
chr20:36633743-36633981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
179, 87
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr20:6096569-6096325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
171, 94
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr20:11482210-11481965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
179, 163
               

               
Conread position:
               
100-347
               

               
Cow position:
               
chr20:40691981-40692236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
93, 77
               

               
Conread position:
               
100-356
               

               
Cow position:
               
chr20:39415669-39415932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 161
               

               
Conread position:
               
100-404
               

               
Cow position:
               
chr20:4621420-4621108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 136
               

               
Conread position:
               
100-411
               

               
Cow position:
               
chr20:21761703-21762006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
100-413
               

               
Cow position:
               
chr20:20099672-20099359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr20:13994738-13995060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
79, 65
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr20:15118203-15118528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
179, 87
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr20:24711760-24712090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 161
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr20:28296216-28296548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
77, 106
               

               
Conread position:
               
100-422
               

               
Cow position:
               
chr20:10200272-10200600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
100-423
               

               
Cow position:
               
chr20:38551298-38551630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
179, 96
               

               
Conread position:
               
101-231
               

               
Cow position:
               
chr20:31077479-31077608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
101-244
               

               
Cow position:
               
chr20:15761021-15760881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
101-246
               

               
Cow position:
               
chr20:17904085-17904229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
101-266
               

               
Cow position:
               
chr20:14735601-14735758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
101-273
               

               
Cow position:
               
chr20:21698312-21698490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 162
               

               
Conread position:
               
101-273
               

               
Cow position:
               
chr20:34901494-34901668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
91, 156
               

               
Conread position:
               
101-273
               

               
Cow position:
               
chr20:35958571-35958744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 157
               

               
Conread position:
               
101-285
               

               
Cow position:
               
chr20:23103145-23103332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
91, 158
               

               
Conread position:
               
101-286
               

               
Cow position:
               
chr20:34084992-34085178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
143, 85
               

               
Conread position:
               
101-287
               

               
Cow position:
               
chr20:22313233-22313049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
101-304
               

               
Cow position:
               
chr20:34001467-34001261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
88, 158
               

               
Conread position:
               
101-305
               

               
Cow position:
               
chr20:29404251-29404044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
88, 156
               

               
Conread position:
               
101-313
               

               
Cow position:
               
chr20:17765404-17765194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
101-323
               

               
Cow position:
               
chr20:19363438-19363215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
101-325
               

               
Cow position:
               
chr20:25686424-25686198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
101-328
               

               
Cow position:
               
chr20:39267034-39266805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
101-331
               

               
Cow position:
               
chr20:31323721-31323943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 32
               

               
Conread position:
               
101-335
               

               
Cow position:
               
chr20:42469687-42469919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
101-336
               

               
Cow position:
               
chr20:28067501-28067263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
101-341
               

               
Cow position:
               
chr20:5636409-5636647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
156, 74
               

               
Conread position:
               
101-343
               

               
Cow position:
               
chr20:18392335-18392103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
178, 87
               

               
Conread position:
               
101-343
               

               
Cow position:
               
chr20:35364971-35365210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
101-343
               

               
Cow position:
               
chr20:35907126-35906882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
141, 89
               

               
Conread position:
               
101-343
               

               
Cow position:
               
chr20:40446258-40446498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
91, 65
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr20:39728374-39728620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
101-383
               

               
Cow position:
               
chr20:22959416-22959136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
178, 47
               

               
Conread position:
               
101-400
               

               
Cow position:
               
chr20:15822478-15822779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
111, 79
               

               
Conread position:
               
101-404
               

               
Cow position:
               
chr20:24069729-24070035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 121
               

               
Conread position:
               
101-404
               

               
Cow position:
               
chr20:40303943-40303649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
182, 63
               

               
Conread position:
               
101-412
               

               
Cow position:
               
chr20:7659293-7658983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 167
               

               
Conread position:
               
101-413
               

               
Cow position:
               
chr20:23541232-23540928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
47, 90
               

               
Conread position:
               
101-414
               

               
Cow position:
               
chr20:5950712-5950397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 29
               

               
Conread position:
               
101-415
               

               
Cow position:
               
chr20:4334599-4334293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
101-417
               

               
Cow position:
               
chr20:11741375-11741069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 114
               

               
Conread position:
               
101-417
               

               
Cow position:
               
chr20:36741401-36741709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 148
               

               
Conread position:
               
101-419
               

               
Cow position:
               
chr20:28594208-28594540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 161
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr20:7738301-7737985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
110, 75
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr20:29754711-29755027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
118, 157
               

               
Conread position:
               
101-421
               

               
Cow position:
               
chr20:4205893-4206206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
101-421
               

               
Cow position:
               
chr20:5814500-5814815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 32
               

               
Conread position:
               
101-421
               

               
Cow position:
               
chr20:34098033-34097698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 159
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr20:8556345-8556017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
87, 168
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr20:12996085-12995740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 160
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr20:14806811-14807136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
91, 156
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr20:19237004-19237323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
178, 59
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr20:20892742-20892423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr20:21019489-21019811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr20:23846744-23846412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
75, 159
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr20:31289431-31289755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr20:38578834-38578522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
102-335
               

               
Cow position:
               
chr20:40127409-40127183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
116, 81
               

               
Conread position:
               
102-336
               

               
Cow position:
               
chr20:33144626-33144392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 89
               

               
Conread position:
               
102-339
               

               
Cow position:
               
chr20:24834019-24834254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
102-340
               

               
Cow position:
               
chr20:38768531-38768298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
102-342
               

               
Cow position:
               
chr20:580996-580753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
102-344
               

               
Cow position:
               
chr20:41883661-41883899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
187, 87
               

               
Conread position:
               
102-348
               

               
Cow position:
               
chr20:32988914-32988659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 151
               

               
Conread position:
               
102-351
               

               
Cow position:
               
chr20:13983289-13983531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
95, 35
               

               
Conread position:
               
102-385
               

               
Cow position:
               
chr20:33976408-33976700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 158
               

               
Conread position:
               
102-410
               

               
Cow position:
               
chr20:34597175-34596864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 165
               

               
Conread position:
               
102-413
               

               
Cow position:
               
chr20:32665060-32665379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 159
               

               
Conread position:
               
102-415
               

               
Cow position:
               
chr20:32866262-32865958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
102-417
               

               
Cow position:
               
chr20:20983923-20984244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
102-418
               

               
Cow position:
               
chr20:34251751-34251422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
102-419
               

               
Cow position:
               
chr20:7438928-7438608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
102-420
               

               
Cow position:
               
chr20:12420693-12420370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
77, 155
               

               
Conread position:
               
102-420
               

               
Cow position:
               
chr20:36239168-36239500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
102-421
               

               
Cow position:
               
chr20:20359859-20359552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 155
               

               
Conread position:
               
102-421
               

               
Cow position:
               
chr20:28249112-28249433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
177, 66
               

               
Conread position:
               
103-252
               

               
Cow position:
               
chr20:9473687-9473538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
103-331
               

               
Cow position:
               
chr20:31080967-31081194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
103-333
               

               
Cow position:
               
chr20:40511832-40511598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
103-336
               

               
Cow position:
               
chr20:34108038-34108265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
103-339
               

               
Cow position:
               
chr20:23870885-23870655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
103-344
               

               
Cow position:
               
chr20:20739359-20739118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 121
               

               
Conread position:
               
103-384
               

               
Cow position:
               
chr20:9433513-9433792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 154
               

               
Conread position:
               
103-384
               

               
Cow position:
               
chr20:39153168-39153455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
103-410
               

               
Cow position:
               
chr20:25009712-25009393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
103-413
               

               
Cow position:
               
chr20:5644713-5645019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
21, 170
               

               
Conread position:
               
103-419
               

               
Cow position:
               
chr20:14980586-14980259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 160
               

               
Conread position:
               
103-420
               

               
Cow position:
               
chr20:6602966-6603278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 124
               

               
Conread position:
               
103-423
               

               
Cow position:
               
chr20:5025018-5024713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
282, 88
               

               
Conread position:
               
103-423
               

               
Cow position:
               
chr20:39398413-39398735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
176, 76
               

               
Conread position:
               
104-278
               

               
Cow position:
               
chr20:28804488-28804671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 160
               

               
Conread position:
               
104-300
               

               
Cow position:
               
chr20:13794914-13795102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
104-409
               

               
Cow position:
               
chr20:14879715-14880024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 154
               

               
Conread position:
               
104-416
               

               
Cow position:
               
chr20:40726661-40726367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
185, 126
               

               
Conread position:
               
105-397
               

               
Cow position:
               
chr20:12085495-12085204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
174, 74
               

               
Conread position:
               
105-413
               

               
Cow position:
               
chr20:11135832-11135510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
105-421
               

               
Cow position:
               
chr20:3141506-3141825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
106-230
               

               
Cow position:
               
chr20:41973820-41973695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
106-334
               

               
Cow position:
               
chr20:311268-311479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
183, 27
               

               
Conread position:
               
106-416
               

               
Cow position:
               
chr20:3599465-3599156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
106-417
               

               
Cow position:
               
chr20:12582025-12581709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
106-421
               

               
Cow position:
               
chr20:20125106-20124781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
107-396
               

               
Cow position:
               
chr20:24902367-24902074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 154
               

               
Conread position:
               
107-408
               

               
Cow position:
               
chr20:9267174-9266863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
107-412
               

               
Cow position:
               
chr20:16941358-16941040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
108-344
               

               
Cow position:
               
chr20:20056553-20056317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
108-352
               

               
Cow position:
               
chr20:17670112-17670360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 162
               

               
Conread position:
               
108-417
               

               
Cow position:
               
chr20:21428098-21428405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
109-338
               

               
Cow position:
               
chr20:42197255-42197476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
109-417
               

               
Cow position:
               
chr20:13652433-13652133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
109-418
               

               
Cow position:
               
chr20:41089862-41089545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
109-422
               

               
Cow position:
               
chr20:34083651-34083972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
110-412
               

               
Cow position:
               
chr20:354962-354657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 81
               

               
Conread position:
               
112-334
               

               
Cow position:
               
chr20:14540277-14540502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
113-256
               

               
Cow position:
               
chr20:22704229-22704375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
113-326
               

               
Cow position:
               
chr20:36040411-36040626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr20:14563991-14564219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
179, 66
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr20:15312601-15312837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
72, 186
               

               
Conread position:
               
113-384
               

               
Cow position:
               
chr20:16548340-16548062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 77
               

               
Conread position:
               
113-401
               

               
Cow position:
               
chr20:40781905-40782188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
166, 63
               

               
Conread position:
               
113-407
               

               
Cow position:
               
chr20:6240584-6240283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 148
               

               
Conread position:
               
113-415
               

               
Cow position:
               
chr20:13967322-13967040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
77, 146
               

               
Conread position:
               
113-417
               

               
Cow position:
               
chr20:14572422-14572130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
130, 52
               

               
Conread position:
               
113-420
               

               
Cow position:
               
chr20:38089849-38090166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
78, 144
               

               
Conread position:
               
113-421
               

               
Cow position:
               
chr20:7442190-7441891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 73
               

               
Conread position:
               
113-421
               

               
Cow position:
               
chr20:21345365-21345689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 148
               

               
Conread position:
               
113-421
               

               
Cow position:
               
chr20:39417960-39417653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
117-420
               

               
Cow position:
               
chr20:38514723-38515038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
162, 59
               

               
Conread position:
               
118-272
               

               
Cow position:
               
chr20:37338857-37339011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
74, 139
               

               
Conread position:
               
118-342
               

               
Cow position:
               
chr20:23064888-23064668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
161, 136
               

               
Conread position:
               
118-344
               

               
Cow position:
               
chr20:11038531-11038745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 51
               

               
Conread position:
               
118-355
               

               
Cow position:
               
chr20:39962518-39962759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
161, 65
               

               
Conread position:
               
118-386
               

               
Cow position:
               
chr20:6423914-6424166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 78
               

               
Conread position:
               
118-405
               

               
Cow position:
               
chr20:23850563-23850855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
118-413
               

               
Cow position:
               
chr20:18622524-18622817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
161, 97
               

               
Conread position:
               
118-420
               

               
Cow position:
               
chr20:16818358-16818667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
118-422
               

               
Cow position:
               
chr20:38847289-38846976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
157, 60
               

               
Conread position:
               
118-423
               

               
Cow position:
               
chr20:38817948-38818242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
121-342
               

               
Cow position:
               
chr20:11176301-11176086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 46
               

               
Conread position:
               
121-343
               

               
Cow position:
               
chr20:42458904-42458688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
121-345
               

               
Cow position:
               
chr20:35009798-35009581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
121-381
               

               
Cow position:
               
chr20:10188219-10188482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
74, 136
               

               
Conread position:
               
121-420
               

               
Cow position:
               
chr20:36779783-36779470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
158, 73
               

               
Conread position:
               
121-421
               

               
Cow position:
               
chr20:14433481-14433170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 143
               

               
Conread position:
               
122-343
               

               
Cow position:
               
chr20:10772150-10772375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
66, 136
               

               
Conread position:
               
122-416
               

               
Cow position:
               
chr20:12205784-12205499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
122-417
               

               
Cow position:
               
chr20:8429696-8429987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
122-418
               

               
Cow position:
               
chr20:28982645-28982945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
122-422
               

               
Cow position:
               
chr20:9376415-9376714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
79, 137
               

               
Conread position:
               
122-423
               

               
Cow position:
               
chr20:4668647-4668946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
213, 10
               

               
Conread position:
               
122-423
               

               
Cow position:
               
chr20:4755886-4755581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
122-423
               

               
Cow position:
               
chr20:26996480-26996787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
156, 68
               

               
Conread position:
               
123-415
               

               
Cow position:
               
chr20:15548953-15548647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 137
               

               
Conread position:
               
124-421
               

               
Cow position:
               
chr20:39517955-39518261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
125-404
               

               
Cow position:
               
chr20:20898641-20898356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
125-422
               

               
Cow position:
               
chr20:42310012-42309715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
120, 51
               

               
Conread position:
               
125-423
               

               
Cow position:
               
chr20:746896-747184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
164, 53
               

               
Conread position:
               
126-421
               

               
Cow position:
               
chr20:31927505-31927217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
153, 42
               

               
Conread position:
               
127-423
               

               
Cow position:
               
chr20:8702966-8702678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
129-418
               

               
Cow position:
               
chr20:39016922-39016622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 5
               

               
Conread position:
               
134-423
               

               
Cow position:
               
chr20:25953224-25953519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
138-336
               

               
Cow position:
               
chr20:1576055-1576257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 93
               

               
Conread position:
               
138-342
               

               
Cow position:
               
chr20:13025653-13025443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
138-343
               

               
Cow position:
               
chr20:34777142-34777350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
141, 118
               

               
Conread position:
               
138-344
               

               
Cow position:
               
chr20:40157863-40158069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 53
               

               
Conread position:
               
138-402
               

               
Cow position:
               
chr20:7426232-7425967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
138-415
               

               
Cow position:
               
chr20:8578210-8578500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
138-416
               

               
Cow position:
               
chr20:18379338-18379623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 124
               

               
Conread position:
               
138-421
               

               
Cow position:
               
chr20:1294068-1293778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
138-421
               

               
Cow position:
               
chr20:8547027-8547310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
49, 124
               

               
Conread position:
               
139-420
               

               
Cow position:
               
chr20:32709490-32709190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 125
               

               
Conread position:
               
140-344
               

               
Cow position:
               
chr20:7709821-7709611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
46, 69
               

               
Conread position:
               
140-423
               

               
Cow position:
               
chr20:29990478-29990192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
139, 55
               

               
Conread position:
               
141-335
               

               
Cow position:
               
chr20:19459702-19459505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
142-331
               

               
Cow position:
               
chr20:6903281-6903470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
137, 48
               

               
Conread position:
               
146-417
               

               
Cow position:
               
chr20:20967289-20967565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
146-418
               

               
Cow position:
               
chr20:6248633-6248352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
146-419
               

               
Cow position:
               
chr20:40423133-40422849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
146-421
               

               
Cow position:
               
chr20:13023523-13023252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
146-423
               

               
Cow position:
               
chr20:13034353-13034081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
150-414
               

               
Cow position:
               
chr20:10208780-10209051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
150-416
               

               
Cow position:
               
chr20:21372281-21372542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
151-402
               

               
Cow position:
               
chr20:20934765-20934503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
152-343
               

               
Cow position:
               
chr20:35727959-35727762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
154-414
               

               
Cow position:
               
chr20:12126326-12126058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
154-414
               

               
Cow position:
               
chr20:14620331-14620063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
14, 112
               

               
Conread position:
               
156-321
               

               
Cow position:
               
chr20:29084409-29084237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
156-411
               

               
Cow position:
               
chr20:6372581-6372323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
156-421
               

               
Cow position:
               
chr20:27623991-27624255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
158-343
               

               
Cow position:
               
chr20:12534759-12534572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
159-384
               

               
Cow position:
               
chr20:36212167-36211939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
130, 97
               

               
Conread position:
               
160-402
               

               
Cow position:
               
chr20:16291678-16291922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
162-420
               

               
Cow position:
               
chr20:35176793-35176525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
164-384
               

               
Cow position:
               
chr20:18831887-18831670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
115, 22
               

               
Conread position:
               
167-344
               

               
Cow position:
               
chr20:33820447-33820623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
167-415
               

               
Cow position:
               
chr20:14739827-14739576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
168-415
               

               
Cow position:
               
chr20:32847334-32847586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
170-419
               

               
Cow position:
               
chr20:1824638-1824383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
173-359
               

               
Cow position:
               
chr20:10818248-10818053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
173-421
               

               
Cow position:
               
chr20:5364925-5365178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
175-422
               

               
Cow position:
               
chr20:2298788-2298545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
176-334
               

               
Cow position:
               
chr20:361184-361031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
176-420
               

               
Cow position:
               
chr20:14282919-14283172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
5, 84
               

               
Conread position:
               
177-381
               

               
Cow position:
               
chr20:16405613-16405829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
177-423
               

               
Cow position:
               
chr20:40578667-40578421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
178-423
               

               
Cow position:
               
chr20:30755281-30755535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
179-334
               

               
Cow position:
               
chr20:15589045-15589202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
181-423
               

               
Cow position:
               
chr20:20158140-20158384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
185-348
               

               
Cow position:
               
chr20:206640-206478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
185-404
               

               
Cow position:
               
chr20:11101423-11101635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
185-413
               

               
Cow position:
               
chr20:15529869-15530102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
186-336
               

               
Cow position:
               
chr20:4002106-4002254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
186-343
               

               
Cow position:
               
chr20:17388541-17388700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
93, 82
               

               
Conread position:
               
187-421
               

               
Cow position:
               
chr20:38925839-38925599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 8
               

               
Conread position:
               
190-412
               

               
Cow position:
               
chr20:23590733-23590509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
191-344
               

               
Cow position:
               
chr20:23678702-23678546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
191-404
               

               
Cow position:
               
chr20:37919355-37919143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
191-411
               

               
Cow position:
               
chr20:5703486-5703713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
191-413
               

               
Cow position:
               
chr20:10246038-10245820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 63
               

               
Conread position:
               
191-414
               

               
Cow position:
               
chr20:23384314-23384539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
144, 37
               

               
Conread position:
               
191-420
               

               
Cow position:
               
chr20:35208191-35207954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
192-384
               

               
Cow position:
               
chr20:2743121-2742924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
192-415
               

               
Cow position:
               
chr20:36806537-36806761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
100, 66
               

               
Conread position:
               
194-411
               

               
Cow position:
               
chr20:31148181-31148392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
85, 38
               

               
Conread position:
               
194-420
               

               
Cow position:
               
chr20:24115566-24115333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
194-421
               

               
Cow position:
               
chr20:30744703-30744471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
194-422
               

               
Cow position:
               
chr20:25972376-25972140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
194-423
               

               
Cow position:
               
chr20:14490269-14490494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
195-415
               

               
Cow position:
               
chr20:34202653-34202886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
195-421
               

               
Cow position:
               
chr20:25021447-25021681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
198-420
               

               
Cow position:
               
chr20:7417145-7416910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
200-337
               

               
Cow position:
               
chr20:28899118-28899261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
201-343
               

               
Cow position:
               
chr20:11444104-11444243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
207-423
               

               
Cow position:
               
chr20:21941465-21941679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
72, 52
               

               
Conread position:
               
209-414
               

               
Cow position:
               
chr20:21291693-21291912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
213-413
               

               
Cow position:
               
chr20:382094-381892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
213-414
               

               
Cow position:
               
chr20:37609659-37609866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 45
               

               
Conread position:
               
213-420
               

               
Cow position:
               
chr20:30639746-30639529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
213-422
               

               
Cow position:
               
chr20:21325363-21325577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
216-418
               

               
Cow position:
               
chr20:27315022-27315223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
217-423
               

               
Cow position:
               
chr20:11499054-11499256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
218-413
               

               
Cow position:
               
chr20:35442240-35442038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
219-419
               

               
Cow position:
               
chr20:2316382-2316179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
219-420
               

               
Cow position:
               
chr20:7934327-7934527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
220-413
               

               
Cow position:
               
chr20:24883323-24883118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
220-419
               

               
Cow position:
               
chr20:11920686-11920485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
220-422
               

               
Cow position:
               
chr20:37357900-37358110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
220-423
               

               
Cow position:
               
chr20:31845241-31845036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
221-344
               

               
Cow position:
               
chr20:2148147-2148024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
221-407
               

               
Cow position:
               
chr20:33076778-33076585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
221-420
               

               
Cow position:
               
chr20:3035378-3035589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
221-421
               

               
Cow position:
               
chr20:7155226-7155427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
70, 41
               

               
Conread position:
               
222-414
               

               
Cow position:
               
chr20:32636281-32636090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
222-421
               

               
Cow position:
               
chr20:28935592-28935391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
222-421
               

               
Cow position:
               
chr20:37273044-37273243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
223-423
               

               
Cow position:
               
chr20:14755792-14755591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
223-423
               

               
Cow position:
               
chr20:19201578-19201786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 35
               

               
Conread position:
               
226-421
               

               
Cow position:
               
chr20:9034166-9033966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
229-420
               

               
Cow position:
               
chr20:33359420-33359220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
233-414
               

               
Cow position:
               
chr20:600363-600542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
234-419
               

               
Cow position:
               
chr20:20459650-20459840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
234-423
               

               
Cow position:
               
chr20:25464987-25464794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
237-416
               

               
Cow position:
               
chr20:21018485-21018667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
237-419
               

               
Cow position:
               
chr20:31468600-31468407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
239-412
               

               
Cow position:
               
chr20:4892056-4891876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
239-416
               

               
Cow position:
               
chr20:5078335-5078523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
239-422
               

               
Cow position:
               
chr20:38061703-38061521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
239-423
               

               
Cow position:
               
chr20:22851541-22851729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
105, 22
               

               
Conread position:
               
240-343
               

               
Cow position:
               
chr20:15515376-15515272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
240-357
               

               
Cow position:
               
chr20:7622917-7622801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
240-404
               

               
Cow position:
               
chr20:22922982-22923147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
240-408
               

               
Cow position:
               
chr20:34847970-34848140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr20:18763203-18763388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 21
               

               
Conread position:
               
241-399
               

               
Cow position:
               
chr20:6848960-6849123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
241-415
               

               
Cow position:
               
chr20:25474618-25474793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
243-415
               

               
Cow position:
               
chr20:8442389-8442211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
246-416
               

               
Cow position:
               
chr20:297937-297759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
247-384
               

               
Cow position:
               
chr20:32555361-32555493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
249-418
               

               
Cow position:
               
chr20:34271399-34271577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
255-416
               

               
Cow position:
               
chr20:8245797-8245963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
255-423
               

               
Cow position:
               
chr20:17733484-17733304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
256-419
               

               
Cow position:
               
chr20:20202298-20202468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
256-422
               

               
Cow position:
               
chr20:22012475-22012641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
259-420
               

               
Cow position:
               
chr20:23880025-23879856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
260-411
               

               
Cow position:
               
chr20:17524357-17524516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
260-423
               

               
Cow position:
               
chr20:21279469-21279633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
268-407
               

               
Cow position:
               
chr20:11822569-11822705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
268-419
               

               
Cow position:
               
chr20:23506026-23506185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
271-423
               

               
Cow position:
               
chr20:35605301-35605456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 76
               
Show alignments to all cow chromosomes.