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Cow genome map

           
Conread name:
           
rcmu25_l1.y1
        

               
Conread position:
               
78-337
               

               
Cow position:
               
chr3:74846879-74846615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
80-414
               

               
Cow position:
               
chr3:64526685-64527022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
105, 134
               

               
Conread position:
               
81-343
               

               
Cow position:
               
chr3:5366609-5366869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
198, 98
               

               
Conread position:
               
81-416
               

               
Cow position:
               
chr3:1517675-1517335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
81-420
               

               
Cow position:
               
chr3:79271883-79271527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 73
               

               
Conread position:
               
81-423
               

               
Cow position:
               
chr3:51033209-51033557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
198, 82
               

               
Conread position:
               
82-423
               

               
Cow position:
               
chr3:54551884-54551525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 185
               

               
Conread position:
               
86-421
               

               
Cow position:
               
chr3:48900494-48900146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 48
               

               
Conread position:
               
87-321
               

               
Cow position:
               
chr3:27545976-27545740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
87-404
               

               
Cow position:
               
chr3:17058696-17058381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
192, 101
               

               
Conread position:
               
87-421
               

               
Cow position:
               
chr3:71238318-71238659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 146
               

               
Conread position:
               
88-316
               

               
Cow position:
               
chr3:75090320-75090550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 153
               

               
Conread position:
               
88-423
               

               
Cow position:
               
chr3:58527243-58527563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 45
               

               
Conread position:
               
89-345
               

               
Cow position:
               
chr3:56943761-56943500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 57
               

               
Conread position:
               
89-413
               

               
Cow position:
               
chr3:15228972-15228665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 65
               

               
Conread position:
               
90-418
               

               
Cow position:
               
chr3:60389614-60389933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
91-277
               

               
Cow position:
               
chr3:80953495-80953680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
103, 166
               

               
Conread position:
               
91-339
               

               
Cow position:
               
chr3:14263243-14263489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
98, 86
               

               
Conread position:
               
91-420
               

               
Cow position:
               
chr3:36375692-36375355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
92-230
               

               
Cow position:
               
chr3:45312900-45313037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 62
               

               
Conread position:
               
92-384
               

               
Cow position:
               
chr3:70334845-70334549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 95
               

               
Conread position:
               
92-410
               

               
Cow position:
               
chr3:74500088-74500429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
94, 168
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr3:5097057-5097288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 163
               

               
Conread position:
               
93-421
               

               
Cow position:
               
chr3:13890326-13890666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 164
               

               
Conread position:
               
93-423
               

               
Cow position:
               
chr3:65969012-65969359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 166
               

               
Conread position:
               
94-230
               

               
Cow position:
               
chr3:3062415-3062555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
94-235
               

               
Cow position:
               
chr3:44534908-44534767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-253
               

               
Cow position:
               
chr3:27544481-27544328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
94-286
               

               
Cow position:
               
chr3:81359253-81359064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
185, 74
               

               
Conread position:
               
94-347
               

               
Cow position:
               
chr3:61278767-61279013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
185, 86
               

               
Conread position:
               
94-352
               

               
Cow position:
               
chr3:82056257-82056009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
111, 101
               

               
Conread position:
               
94-356
               

               
Cow position:
               
chr3:66708218-66707952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
89, 33
               

               
Conread position:
               
95-231
               

               
Cow position:
               
chr3:76169432-76169296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
95-277
               

               
Cow position:
               
chr3:61171652-61171475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
95-345
               

               
Cow position:
               
chr3:38691554-38691305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 94
               

               
Conread position:
               
95-384
               

               
Cow position:
               
chr3:66900883-66900583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
95-401
               

               
Cow position:
               
chr3:58540675-58540354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
95-401
               

               
Cow position:
               
chr3:73820517-73820202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
95-417
               

               
Cow position:
               
chr3:16333654-16333983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
184, 39
               

               
Conread position:
               
95-422
               

               
Cow position:
               
chr3:53384430-53384096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
96-231
               

               
Cow position:
               
chr3:44623031-44622898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
96-236
               

               
Cow position:
               
chr3:63861037-63860896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
96-339
               

               
Cow position:
               
chr3:31850516-31850280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
96-344
               

               
Cow position:
               
chr3:53113027-53113277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 98
               

               
Conread position:
               
96-344
               

               
Cow position:
               
chr3:67704396-67704648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 163
               

               
Conread position:
               
96-344
               

               
Cow position:
               
chr3:80053685-80053442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 93
               

               
Conread position:
               
96-356
               

               
Cow position:
               
chr3:48296563-48296812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
95, 113
               

               
Conread position:
               
96-384
               

               
Cow position:
               
chr3:32585007-32585288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
96-404
               

               
Cow position:
               
chr3:72273-72586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
96-417
               

               
Cow position:
               
chr3:5365531-5365845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 94
               

               
Conread position:
               
96-421
               

               
Cow position:
               
chr3:21015107-21014773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 290
               

               
Conread position:
               
96-421
               

               
Cow position:
               
chr3:48468036-48468359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
112, 86
               

               
Conread position:
               
96-423
               

               
Cow position:
               
chr3:24468525-24468199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 88
               

               
Conread position:
               
97-254
               

               
Cow position:
               
chr3:23037771-23037609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
97-273
               

               
Cow position:
               
chr3:33698584-33698760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 167
               

               
Conread position:
               
97-331
               

               
Cow position:
               
chr3:11711816-11712044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 162
               

               
Conread position:
               
97-384
               

               
Cow position:
               
chr3:59034892-59035186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
97-413
               

               
Cow position:
               
chr3:37041269-37041591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 163
               

               
Conread position:
               
97-421
               

               
Cow position:
               
chr3:83797980-83797640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 95
               

               
Conread position:
               
98-222
               

               
Cow position:
               
chr3:4087308-4087180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
98-270
               

               
Cow position:
               
chr3:55947438-55947610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
98-285
               

               
Cow position:
               
chr3:44837522-44837334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
98-344
               

               
Cow position:
               
chr3:26874448-26874693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
98-352
               

               
Cow position:
               
chr3:53588529-53588274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
98-377
               

               
Cow position:
               
chr3:31206731-31207015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
98-379
               

               
Cow position:
               
chr3:38783472-38783746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
181, 81
               

               
Conread position:
               
98-384
               

               
Cow position:
               
chr3:25944940-25945238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
80, 166
               

               
Conread position:
               
98-384
               

               
Cow position:
               
chr3:45279323-45279612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
98-384
               

               
Cow position:
               
chr3:72390941-72391231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 84
               

               
Conread position:
               
98-414
               

               
Cow position:
               
chr3:33253021-33252716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
181, 69
               

               
Conread position:
               
98-415
               

               
Cow position:
               
chr3:188719-189051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
75, 173
               

               
Conread position:
               
98-416
               

               
Cow position:
               
chr3:2648655-2648330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
98-418
               

               
Cow position:
               
chr3:17957321-17957642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
104, 79
               

               
Conread position:
               
98-418
               

               
Cow position:
               
chr3:76268123-76267794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 161
               

               
Conread position:
               
98-419
               

               
Cow position:
               
chr3:57754621-57754294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr3:26489226-26488894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
85, 159
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr3:53592838-53592503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 110
               

               
Conread position:
               
98-420
               

               
Cow position:
               
chr3:60933275-60933600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr3:3913592-3913257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr3:5044947-5044627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
181, 82
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr3:31298297-31297974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
181, 82
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr3:48852105-48851784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 70
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr3:49461074-49460743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr3:53095077-53094741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 166
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr3:54903431-54903751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
110, 79
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr3:55434186-55434514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr3:74088311-74087994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
181, 40
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr3:79097959-79098283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
191, 35
               

               
Conread position:
               
98-422
               

               
Cow position:
               
chr3:26739561-26739240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
80, 169
               

               
Conread position:
               
98-422
               

               
Cow position:
               
chr3:39661594-39661271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
181, 35
               

               
Conread position:
               
98-422
               

               
Cow position:
               
chr3:61539659-61539982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
97, 160
               

               
Conread position:
               
98-423
               

               
Cow position:
               
chr3:55819606-55819934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 165
               

               
Conread position:
               
99-220
               

               
Cow position:
               
chr3:67161799-67161921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
99-233
               

               
Cow position:
               
chr3:49731784-49731649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
99-236
               

               
Cow position:
               
chr3:61024446-61024308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
99-253
               

               
Cow position:
               
chr3:42178015-42178167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
99-259
               

               
Cow position:
               
chr3:72018974-72019135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
99-266
               

               
Cow position:
               
chr3:55106580-55106417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
99-267
               

               
Cow position:
               
chr3:66375175-66375343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 158
               

               
Conread position:
               
99-296
               

               
Cow position:
               
chr3:74878732-74878535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
180, 91
               

               
Conread position:
               
99-312
               

               
Cow position:
               
chr3:10896686-10896892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
99-325
               

               
Cow position:
               
chr3:48629735-48629506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
99-325
               

               
Cow position:
               
chr3:74502463-74502242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
180, 66
               

               
Conread position:
               
99-328
               

               
Cow position:
               
chr3:38347060-38347276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
180, 49
               

               
Conread position:
               
99-331
               

               
Cow position:
               
chr3:23092120-23091889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
99-344
               

               
Cow position:
               
chr3:32457057-32457295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
180, 88
               

               
Conread position:
               
99-344
               

               
Cow position:
               
chr3:63179719-63179956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 69
               

               
Conread position:
               
99-384
               

               
Cow position:
               
chr3:19793734-19793447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
99-384
               

               
Cow position:
               
chr3:44101828-44102110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 89
               

               
Conread position:
               
99-411
               

               
Cow position:
               
chr3:59040424-59040743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
99-412
               

               
Cow position:
               
chr3:14633131-14632805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 161
               

               
Conread position:
               
99-415
               

               
Cow position:
               
chr3:31419559-31419872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
180, 78
               

               
Conread position:
               
99-418
               

               
Cow position:
               
chr3:77365441-77365111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 164
               

               
Conread position:
               
99-420
               

               
Cow position:
               
chr3:25690649-25690982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
96, 70
               

               
Conread position:
               
99-421
               

               
Cow position:
               
chr3:11200124-11199793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 165
               

               
Conread position:
               
99-421
               

               
Cow position:
               
chr3:49482850-49482531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 79
               

               
Conread position:
               
99-421
               

               
Cow position:
               
chr3:55712288-55712614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 165
               

               
Conread position:
               
99-421
               

               
Cow position:
               
chr3:67929404-67929076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
99-422
               

               
Cow position:
               
chr3:73467481-73467811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
99-422
               

               
Cow position:
               
chr3:83490943-83491265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 87
               

               
Conread position:
               
99-423
               

               
Cow position:
               
chr3:26981923-26982235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
180, 71
               

               
Conread position:
               
99-423
               

               
Cow position:
               
chr3:76713467-76713126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
97, 136
               

               
Conread position:
               
100-238
               

               
Cow position:
               
chr3:1534762-1534621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
100-247
               

               
Cow position:
               
chr3:84000471-84000617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
100-270
               

               
Cow position:
               
chr3:39328253-39328426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
72, 158
               

               
Conread position:
               
100-286
               

               
Cow position:
               
chr3:19708246-19708065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
179, 87
               

               
Conread position:
               
100-286
               

               
Cow position:
               
chr3:22820426-22820614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
90, 167
               

               
Conread position:
               
100-328
               

               
Cow position:
               
chr3:59101687-59101913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
100-332
               

               
Cow position:
               
chr3:80581522-80581745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
179, 84
               

               
Conread position:
               
100-335
               

               
Cow position:
               
chr3:49650244-49650481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
91, 78
               

               
Conread position:
               
100-341
               

               
Cow position:
               
chr3:26920767-26921007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
89, 48
               

               
Conread position:
               
100-341
               

               
Cow position:
               
chr3:79292688-79292926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 34
               

               
Conread position:
               
100-342
               

               
Cow position:
               
chr3:39171625-39171390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
97, 121
               

               
Conread position:
               
100-343
               

               
Cow position:
               
chr3:12712060-12711814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 158
               

               
Conread position:
               
100-343
               

               
Cow position:
               
chr3:14626299-14626049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
118, 162
               

               
Conread position:
               
100-343
               

               
Cow position:
               
chr3:52863326-52863082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
177, 100
               

               
Conread position:
               
100-344
               

               
Cow position:
               
chr3:43726935-43727173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
95, 34
               

               
Conread position:
               
100-344
               

               
Cow position:
               
chr3:59884214-59883966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr3:57624322-57624567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 90
               

               
Conread position:
               
100-348
               

               
Cow position:
               
chr3:8733497-8733253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
44, 77
               

               
Conread position:
               
100-362
               

               
Cow position:
               
chr3:79645585-79645306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
40, 170
               

               
Conread position:
               
100-362
               

               
Cow position:
               
chr3:82461036-82461297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 156
               

               
Conread position:
               
100-379
               

               
Cow position:
               
chr3:14598809-14599067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
178, 38
               

               
Conread position:
               
100-384
               

               
Cow position:
               
chr3:23876853-23877143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 193
               

               
Conread position:
               
100-384
               

               
Cow position:
               
chr3:46006168-46005872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
100-384
               

               
Cow position:
               
chr3:54960046-54960309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 133
               

               
Conread position:
               
100-384
               

               
Cow position:
               
chr3:55010306-55010028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
88, 126
               

               
Conread position:
               
100-384
               

               
Cow position:
               
chr3:60597401-60597680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
100-408
               

               
Cow position:
               
chr3:3889709-3889407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 56
               

               
Conread position:
               
100-413
               

               
Cow position:
               
chr3:18459663-18459361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
179, 79
               

               
Conread position:
               
100-413
               

               
Cow position:
               
chr3:68648023-68648352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
139, 90
               

               
Conread position:
               
100-414
               

               
Cow position:
               
chr3:23920571-23920250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 90
               

               
Conread position:
               
100-414
               

               
Cow position:
               
chr3:38828626-38828927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
179, 73
               

               
Conread position:
               
100-414
               

               
Cow position:
               
chr3:55970364-55970691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 154
               

               
Conread position:
               
100-415
               

               
Cow position:
               
chr3:8393209-8393516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 64
               

               
Conread position:
               
100-415
               

               
Cow position:
               
chr3:15751863-15751545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
100-417
               

               
Cow position:
               
chr3:68145984-68145676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 75
               

               
Conread position:
               
100-419
               

               
Cow position:
               
chr3:47417708-47417390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
89, 143
               

               
Conread position:
               
100-419
               

               
Cow position:
               
chr3:71231256-71231580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 92
               

               
Conread position:
               
100-420
               

               
Cow position:
               
chr3:48252742-48253062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
100-420
               

               
Cow position:
               
chr3:54100863-54100530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 87
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr3:210175-210505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr3:4050051-4050364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr3:11254301-11253982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
100-421
               

               
Cow position:
               
chr3:30179939-30180266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 160
               

               
Conread position:
               
100-423
               

               
Cow position:
               
chr3:3032263-3032594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 143
               

               
Conread position:
               
100-423
               

               
Cow position:
               
chr3:73764337-73764029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
101-241
               

               
Cow position:
               
chr3:15231889-15232029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
120, 91
               

               
Conread position:
               
101-266
               

               
Cow position:
               
chr3:83201665-83201502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
101-285
               

               
Cow position:
               
chr3:34937702-34937886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 134
               

               
Conread position:
               
101-295
               

               
Cow position:
               
chr3:66609984-66609791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
178, 150
               

               
Conread position:
               
101-305
               

               
Cow position:
               
chr3:73759657-73759454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
101-310
               

               
Cow position:
               
chr3:26553856-26553647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
101-310
               

               
Cow position:
               
chr3:76015150-76015360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
101-315
               

               
Cow position:
               
chr3:78896508-78896720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
178, 53
               

               
Conread position:
               
101-316
               

               
Cow position:
               
chr3:7940697-7940483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 119
               

               
Conread position:
               
101-319
               

               
Cow position:
               
chr3:80468816-80468601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
188, 37
               

               
Conread position:
               
101-322
               

               
Cow position:
               
chr3:72675951-72676171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
101-329
               

               
Cow position:
               
chr3:17895705-17895935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
101-331
               

               
Cow position:
               
chr3:59588379-59588599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 33
               

               
Conread position:
               
101-332
               

               
Cow position:
               
chr3:30222046-30222281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
86, 158
               

               
Conread position:
               
101-333
               

               
Cow position:
               
chr3:66292318-66292085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
101-335
               

               
Cow position:
               
chr3:57760358-57760591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
178, 88
               

               
Conread position:
               
101-336
               

               
Cow position:
               
chr3:28908343-28908109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
177, 36
               

               
Conread position:
               
101-342
               

               
Cow position:
               
chr3:53739327-53739085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
178, 155
               

               
Conread position:
               
101-342
               

               
Cow position:
               
chr3:75046018-75045776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 116
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr3:2680376-2680615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
110, 76
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr3:59630643-59630411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
178, 86
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr3:66884081-66883843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
178, 74
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr3:70899754-70899992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
94, 33
               

               
Conread position:
               
101-348
               

               
Cow position:
               
chr3:32184162-32183924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 157
               

               
Conread position:
               
101-348
               

               
Cow position:
               
chr3:59691757-59691996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
188, 53
               

               
Conread position:
               
101-348
               

               
Cow position:
               
chr3:81471236-81470990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
178, 67
               

               
Conread position:
               
101-350
               

               
Cow position:
               
chr3:5100908-5100664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
178, 85
               

               
Conread position:
               
101-361
               

               
Cow position:
               
chr3:55835966-55835705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
62, 156
               

               
Conread position:
               
101-369
               

               
Cow position:
               
chr3:80564822-80565092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 115
               

               
Conread position:
               
101-375
               

               
Cow position:
               
chr3:73708907-73709181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 37
               

               
Conread position:
               
101-384
               

               
Cow position:
               
chr3:65413421-65413131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 156
               

               
Conread position:
               
101-401
               

               
Cow position:
               
chr3:53046798-53046495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
101-404
               

               
Cow position:
               
chr3:17222285-17221967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
101-404
               

               
Cow position:
               
chr3:74533211-74533500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
178, 41
               

               
Conread position:
               
101-404
               

               
Cow position:
               
chr3:75158218-75158521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
101-404
               

               
Cow position:
               
chr3:76922804-76922507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
85, 108
               

               
Conread position:
               
101-407
               

               
Cow position:
               
chr3:53150187-53150503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 76
               

               
Conread position:
               
101-410
               

               
Cow position:
               
chr3:10958384-10958071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
85, 165
               

               
Conread position:
               
101-410
               

               
Cow position:
               
chr3:63269081-63269406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
178, 158
               

               
Conread position:
               
101-410
               

               
Cow position:
               
chr3:65236883-65237196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
101-411
               

               
Cow position:
               
chr3:68616466-68616162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
101-413
               

               
Cow position:
               
chr3:23408493-23408189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
178, 76
               

               
Conread position:
               
101-413
               

               
Cow position:
               
chr3:77581968-77582282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 91
               

               
Conread position:
               
101-414
               

               
Cow position:
               
chr3:19585720-19586040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 122
               

               
Conread position:
               
101-417
               

               
Cow position:
               
chr3:5374193-5374489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
178, 44
               

               
Conread position:
               
101-417
               

               
Cow position:
               
chr3:50768541-50768859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
178, 78
               

               
Conread position:
               
101-417
               

               
Cow position:
               
chr3:62046521-62046851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
101-419
               

               
Cow position:
               
chr3:1830710-1830393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr3:2025045-2025385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
86, 60
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr3:59597042-59597356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
178, 94
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr3:64281073-64280755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 163
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr3:68586879-68587202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 157
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr3:70334105-70333787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 90
               

               
Conread position:
               
101-420
               

               
Cow position:
               
chr3:83215118-83215452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 165
               

               
Conread position:
               
101-421
               

               
Cow position:
               
chr3:15052093-15051768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 154
               

               
Conread position:
               
101-421
               

               
Cow position:
               
chr3:15954228-15953899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
85, 156
               

               
Conread position:
               
101-421
               

               
Cow position:
               
chr3:29813103-29813410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
178, 129
               

               
Conread position:
               
101-421
               

               
Cow position:
               
chr3:48810778-48810454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
101-422
               

               
Cow position:
               
chr3:3985186-3985500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 89
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:17331585-17331905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 76
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:18066994-18067315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 136
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:19792751-19793083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 174
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:23169207-23168882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 46
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:31309495-31309169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:54945987-54946307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 121
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:57764086-57764399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
178, 79
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:68881253-68880945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 78
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:71238015-71238335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 94
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:75050760-75050437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:75853472-75853150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
41, 125
               

               
Conread position:
               
101-423
               

               
Cow position:
               
chr3:76155846-76156172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
102-235
               

               
Cow position:
               
chr3:78894463-78894333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
102-236
               

               
Cow position:
               
chr3:59271400-59271536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
102-252
               

               
Cow position:
               
chr3:69849647-69849498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
102-317
               

               
Cow position:
               
chr3:68583142-68582925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 69
               

               
Conread position:
               
102-319
               

               
Cow position:
               
chr3:49218454-49218226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 82
               

               
Conread position:
               
102-329
               

               
Cow position:
               
chr3:46901057-46901284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 88
               

               
Conread position:
               
102-331
               

               
Cow position:
               
chr3:45647991-45648219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 153
               

               
Conread position:
               
102-331
               

               
Cow position:
               
chr3:50614496-50614730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
21, 165
               

               
Conread position:
               
102-331
               

               
Cow position:
               
chr3:55085317-55085081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
66, 161
               

               
Conread position:
               
102-336
               

               
Cow position:
               
chr3:24352719-24352954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
102-340
               

               
Cow position:
               
chr3:20993670-20993912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
102-341
               

               
Cow position:
               
chr3:49382812-49383047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
102-344
               

               
Cow position:
               
chr3:24935230-24935466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
177, 70
               

               
Conread position:
               
102-344
               

               
Cow position:
               
chr3:59621785-59621546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
177, 35
               

               
Conread position:
               
102-347
               

               
Cow position:
               
chr3:3738347-3738586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
177, 87
               

               
Conread position:
               
102-353
               

               
Cow position:
               
chr3:34669867-34669624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
102-353
               

               
Cow position:
               
chr3:35852606-35852363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
92, 32
               

               
Conread position:
               
102-356
               

               
Cow position:
               
chr3:8393795-8394056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 243
               

               
Conread position:
               
102-379
               

               
Cow position:
               
chr3:77271414-77271140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
177, 84
               

               
Conread position:
               
102-405
               

               
Cow position:
               
chr3:49678986-49679301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
102-411
               

               
Cow position:
               
chr3:78093524-78093220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
177, 71
               

               
Conread position:
               
102-413
               

               
Cow position:
               
chr3:73394981-73395290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
102-414
               

               
Cow position:
               
chr3:17695144-17694825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
102-414
               

               
Cow position:
               
chr3:24872574-24872869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
88, 109
               

               
Conread position:
               
102-414
               

               
Cow position:
               
chr3:29360280-29359987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
177, 31
               

               
Conread position:
               
102-414
               

               
Cow position:
               
chr3:53318264-53318586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
177, 85
               

               
Conread position:
               
102-415
               

               
Cow position:
               
chr3:15443870-15443549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 138
               

               
Conread position:
               
102-415
               

               
Cow position:
               
chr3:38035731-38035411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
84, 90
               

               
Conread position:
               
102-415
               

               
Cow position:
               
chr3:51578461-51578147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
102-416
               

               
Cow position:
               
chr3:2506616-2506297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
102-416
               

               
Cow position:
               
chr3:18686766-18687080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
102-419
               

               
Cow position:
               
chr3:29596253-29596576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
92, 35
               

               
Conread position:
               
102-420
               

               
Cow position:
               
chr3:57273925-57274240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 67
               

               
Conread position:
               
102-421
               

               
Cow position:
               
chr3:18725776-18725479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
177, 50
               

               
Conread position:
               
102-421
               

               
Cow position:
               
chr3:67698138-67698462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
106, 75
               

               
Conread position:
               
102-421
               

               
Cow position:
               
chr3:72473772-72474105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
82, 154
               

               
Conread position:
               
102-423
               

               
Cow position:
               
chr3:23105507-23105179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 166
               

               
Conread position:
               
102-423
               

               
Cow position:
               
chr3:71497282-71496943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
103-228
               

               
Cow position:
               
chr3:17952517-17952643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
103-244
               

               
Cow position:
               
chr3:15859808-15859665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
103-248
               

               
Cow position:
               
chr3:77729311-77729461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
103-273
               

               
Cow position:
               
chr3:70631877-70632050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 59
               

               
Conread position:
               
103-310
               

               
Cow position:
               
chr3:20437791-20437588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
103-317
               

               
Cow position:
               
chr3:3638048-3638253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
176, 84
               

               
Conread position:
               
103-331
               

               
Cow position:
               
chr3:37186689-37186915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
176, 47
               

               
Conread position:
               
103-331
               

               
Cow position:
               
chr3:64172304-64172529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
103-340
               

               
Cow position:
               
chr3:35153481-35153715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
103-347
               

               
Cow position:
               
chr3:17935074-17934834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
103-381
               

               
Cow position:
               
chr3:53572894-53572609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
103-413
               

               
Cow position:
               
chr3:53909972-53910281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
103-418
               

               
Cow position:
               
chr3:2393102-2392788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 133
               

               
Conread position:
               
103-420
               

               
Cow position:
               
chr3:15153551-15153870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
103-421
               

               
Cow position:
               
chr3:24548987-24548647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
103-421
               

               
Cow position:
               
chr3:32787319-32787645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
103-421
               

               
Cow position:
               
chr3:48241477-48241789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 112
               

               
Conread position:
               
103-421
               

               
Cow position:
               
chr3:59473981-59474304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
103-423
               

               
Cow position:
               
chr3:1453263-1452941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
104-236
               

               
Cow position:
               
chr3:41367124-41366987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
104-254
               

               
Cow position:
               
chr3:59514966-59515115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
104-272
               

               
Cow position:
               
chr3:35005640-35005804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
104-416
               

               
Cow position:
               
chr3:54434834-54435147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 130
               

               
Conread position:
               
104-419
               

               
Cow position:
               
chr3:6689863-6690177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 83
               

               
Conread position:
               
104-420
               

               
Cow position:
               
chr3:55319041-55318715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 160
               

               
Conread position:
               
104-422
               

               
Cow position:
               
chr3:76024381-76024688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
153, 48
               

               
Conread position:
               
104-423
               

               
Cow position:
               
chr3:14552740-14553058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
105-283
               

               
Cow position:
               
chr3:71430344-71430165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
105-335
               

               
Cow position:
               
chr3:53240125-53240350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
184, 85
               

               
Conread position:
               
105-357
               

               
Cow position:
               
chr3:70401764-70402011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
174, 82
               

               
Conread position:
               
105-402
               

               
Cow position:
               
chr3:59000889-59000599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 61
               

               
Conread position:
               
105-412
               

               
Cow position:
               
chr3:4319573-4319893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
105-418
               

               
Cow position:
               
chr3:34871426-34871749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 154
               

               
Conread position:
               
105-419
               

               
Cow position:
               
chr3:3037069-3036759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 160
               

               
Conread position:
               
105-420
               

               
Cow position:
               
chr3:58765217-58764903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 73
               

               
Conread position:
               
106-335
               

               
Cow position:
               
chr3:26219191-26218960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 153
               

               
Conread position:
               
106-338
               

               
Cow position:
               
chr3:61116995-61116757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
106-356
               

               
Cow position:
               
chr3:58973162-58973408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
106-400
               

               
Cow position:
               
chr3:59451454-59451760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
106-404
               

               
Cow position:
               
chr3:55124419-55124119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
106-415
               

               
Cow position:
               
chr3:52652216-52651903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
106-419
               

               
Cow position:
               
chr3:67744764-67744459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
107-280
               

               
Cow position:
               
chr3:43528378-43528196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 157
               

               
Conread position:
               
107-421
               

               
Cow position:
               
chr3:18144257-18143932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 152
               

               
Conread position:
               
107-421
               

               
Cow position:
               
chr3:19198846-19199170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
46, 66
               

               
Conread position:
               
107-422
               

               
Cow position:
               
chr3:23471603-23471278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 157
               

               
Conread position:
               
107-423
               

               
Cow position:
               
chr3:17456404-17456082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
108-335
               

               
Cow position:
               
chr3:34270781-34271007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 95
               

               
Conread position:
               
108-350
               

               
Cow position:
               
chr3:16928896-16929132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
108-408
               

               
Cow position:
               
chr3:64010958-64010638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
109-273
               

               
Cow position:
               
chr3:15992580-15992747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 151
               

               
Conread position:
               
109-351
               

               
Cow position:
               
chr3:31771555-31771787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
109-404
               

               
Cow position:
               
chr3:73298953-73299231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
170, 75
               

               
Conread position:
               
110-419
               

               
Cow position:
               
chr3:14801607-14801925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
112-384
               

               
Cow position:
               
chr3:61169663-61169953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 149
               

               
Conread position:
               
112-420
               

               
Cow position:
               
chr3:59392247-59391943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
112-421
               

               
Cow position:
               
chr3:15672285-15671970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
113-231
               

               
Cow position:
               
chr3:30701177-30701298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
113-286
               

               
Cow position:
               
chr3:46350541-46350714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 120
               

               
Conread position:
               
113-312
               

               
Cow position:
               
chr3:23445022-23444818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
113-322
               

               
Cow position:
               
chr3:46541957-46541749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
166, 53
               

               
Conread position:
               
113-323
               

               
Cow position:
               
chr3:55109746-55109532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 146
               

               
Conread position:
               
113-335
               

               
Cow position:
               
chr3:42423462-42423235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
50, 149
               

               
Conread position:
               
113-338
               

               
Cow position:
               
chr3:26960719-26960492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr3:22509897-22510124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 108
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr3:84175955-84175722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 109
               

               
Conread position:
               
113-370
               

               
Cow position:
               
chr3:28898351-28898090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
166, 77
               

               
Conread position:
               
113-404
               

               
Cow position:
               
chr3:51234225-51233938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
113-412
               

               
Cow position:
               
chr3:56476551-56476849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
113-414
               

               
Cow position:
               
chr3:42796638-42796342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
139, 57
               

               
Conread position:
               
113-416
               

               
Cow position:
               
chr3:7661723-7662035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
113-416
               

               
Cow position:
               
chr3:18393517-18393224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
113-416
               

               
Cow position:
               
chr3:49327812-49328113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 145
               

               
Conread position:
               
113-417
               

               
Cow position:
               
chr3:44932383-44932692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 146
               

               
Conread position:
               
113-418
               

               
Cow position:
               
chr3:59333643-59333940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
135, 24
               

               
Conread position:
               
113-419
               

               
Cow position:
               
chr3:26903987-26904281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
113-420
               

               
Cow position:
               
chr3:3649347-3649056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
166, 69
               

               
Conread position:
               
113-420
               

               
Cow position:
               
chr3:39969997-39969680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
113-421
               

               
Cow position:
               
chr3:17235338-17235021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
113-421
               

               
Cow position:
               
chr3:21081503-21081196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
239, 24
               

               
Conread position:
               
113-422
               

               
Cow position:
               
chr3:27697106-27696780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
166, 66
               

               
Conread position:
               
113-423
               

               
Cow position:
               
chr3:14465840-14465530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
113-423
               

               
Cow position:
               
chr3:55177880-55177565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 147
               

               
Conread position:
               
113-423
               

               
Cow position:
               
chr3:71246897-71247199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
164, 41
               

               
Conread position:
               
113-423
               

               
Cow position:
               
chr3:72342115-72342433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
114-248
               

               
Cow position:
               
chr3:9843459-9843592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
114-351
               

               
Cow position:
               
chr3:72504028-72503787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
12, 145
               

               
Conread position:
               
114-401
               

               
Cow position:
               
chr3:74079768-74079475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 143
               

               
Conread position:
               
114-404
               

               
Cow position:
               
chr3:12978745-12978449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 77
               

               
Conread position:
               
114-413
               

               
Cow position:
               
chr3:55189885-55189574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 144
               

               
Conread position:
               
114-413
               

               
Cow position:
               
chr3:67930312-67929994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr3:10103920-10104142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
164, 33
               

               
Conread position:
               
115-348
               

               
Cow position:
               
chr3:27940269-27940039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
117-294
               

               
Cow position:
               
chr3:65800466-65800637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
118-319
               

               
Cow position:
               
chr3:56501-56300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 57
               

               
Conread position:
               
118-336
               

               
Cow position:
               
chr3:15752759-15752542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 118
               

               
Conread position:
               
118-344
               

               
Cow position:
               
chr3:35621178-35621404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 116
               

               
Conread position:
               
118-356
               

               
Cow position:
               
chr3:68262640-68262880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
118-361
               

               
Cow position:
               
chr3:16254948-16254722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
161, 30
               

               
Conread position:
               
118-382
               

               
Cow position:
               
chr3:56678478-56678206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
118-384
               

               
Cow position:
               
chr3:11987204-11987471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
118-412
               

               
Cow position:
               
chr3:53270705-53271007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 136
               

               
Conread position:
               
118-412
               

               
Cow position:
               
chr3:75570568-75570271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
118-413
               

               
Cow position:
               
chr3:9663295-9662994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
161, 24
               

               
Conread position:
               
118-413
               

               
Cow position:
               
chr3:54373983-54373682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
161, 72
               

               
Conread position:
               
118-413
               

               
Cow position:
               
chr3:75687562-75687262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
161, 136
               

               
Conread position:
               
118-413
               

               
Cow position:
               
chr3:81039869-81039571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 59
               

               
Conread position:
               
118-417
               

               
Cow position:
               
chr3:19711459-19711158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
171, 76
               

               
Conread position:
               
118-417
               

               
Cow position:
               
chr3:65058579-65058879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 19
               

               
Conread position:
               
118-418
               

               
Cow position:
               
chr3:25477690-25477973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
161, 30
               

               
Conread position:
               
118-419
               

               
Cow position:
               
chr3:8061003-8061302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
118-419
               

               
Cow position:
               
chr3:14601836-14601530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 270
               

               
Conread position:
               
118-419
               

               
Cow position:
               
chr3:67520296-67519995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
69, 143
               

               
Conread position:
               
118-420
               

               
Cow position:
               
chr3:54740013-54739717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 144
               

               
Conread position:
               
118-421
               

               
Cow position:
               
chr3:58960710-58960410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 139
               

               
Conread position:
               
118-423
               

               
Cow position:
               
chr3:13380411-13380092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 149
               

               
Conread position:
               
118-423
               

               
Cow position:
               
chr3:59604726-59605028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 32
               

               
Conread position:
               
118-423
               

               
Cow position:
               
chr3:78443682-78443382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
161, 27
               

               
Conread position:
               
119-421
               

               
Cow position:
               
chr3:14194303-14194006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
119-422
               

               
Cow position:
               
chr3:22221196-22221511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 144
               

               
Conread position:
               
121-222
               

               
Cow position:
               
chr3:27212240-27212343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
121-344
               

               
Cow position:
               
chr3:67543989-67543766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
157, 89
               

               
Conread position:
               
121-405
               

               
Cow position:
               
chr3:29891533-29891239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
74, 135
               

               
Conread position:
               
121-414
               

               
Cow position:
               
chr3:36570166-36569862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
121-417
               

               
Cow position:
               
chr3:2518653-2518361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
121-421
               

               
Cow position:
               
chr3:6403300-6403604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
158, 65
               

               
Conread position:
               
121-421
               

               
Cow position:
               
chr3:22668293-22668596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
158, 56
               

               
Conread position:
               
121-423
               

               
Cow position:
               
chr3:2674907-2675217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
158, 135
               

               
Conread position:
               
121-423
               

               
Cow position:
               
chr3:15388095-15388406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
122-322
               

               
Cow position:
               
chr3:61840156-61840355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 129
               

               
Conread position:
               
122-382
               

               
Cow position:
               
chr3:69416903-69416637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 133
               

               
Conread position:
               
122-414
               

               
Cow position:
               
chr3:31225319-31225598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
167, 12
               

               
Conread position:
               
122-414
               

               
Cow position:
               
chr3:83787316-83787618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
122-421
               

               
Cow position:
               
chr3:26992446-26992756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 137
               

               
Conread position:
               
122-421
               

               
Cow position:
               
chr3:80740443-80740736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
122-423
               

               
Cow position:
               
chr3:174827-175128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
123-400
               

               
Cow position:
               
chr3:74119559-74119268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 148
               

               
Conread position:
               
123-414
               

               
Cow position:
               
chr3:53790656-53790365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
123-423
               

               
Cow position:
               
chr3:58134807-58134499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
62, 134
               

               
Conread position:
               
124-344
               

               
Cow position:
               
chr3:33693699-33693921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 69
               

               
Conread position:
               
124-379
               

               
Cow position:
               
chr3:61323215-61323472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
142, 26
               

               
Conread position:
               
124-412
               

               
Cow position:
               
chr3:20674992-20674705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
125-334
               

               
Cow position:
               
chr3:37599544-37599336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
154, 65
               

               
Conread position:
               
125-423
               

               
Cow position:
               
chr3:58318071-58317757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
126-323
               

               
Cow position:
               
chr3:59799131-59799329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
153, 130
               

               
Conread position:
               
126-421
               

               
Cow position:
               
chr3:48072994-48072703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 30
               

               
Conread position:
               
127-415
               

               
Cow position:
               
chr3:45667460-45667166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
148, 75
               

               
Conread position:
               
127-421
               

               
Cow position:
               
chr3:55094350-55094048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
29, 133
               

               
Conread position:
               
128-285
               

               
Cow position:
               
chr3:79271072-79270915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
147, 64
               

               
Conread position:
               
129-331
               

               
Cow position:
               
chr3:14506029-14505826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 126
               

               
Conread position:
               
129-413
               

               
Cow position:
               
chr3:53221902-53222187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
113, 5
               

               
Conread position:
               
129-423
               

               
Cow position:
               
chr3:27274417-27274713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
59, 5
               

               
Conread position:
               
133-384
               

               
Cow position:
               
chr3:65019975-65019714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 123
               

               
Conread position:
               
138-330
               

               
Cow position:
               
chr3:84597070-84596877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
138-341
               

               
Cow position:
               
chr3:27727934-27727733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
138-384
               

               
Cow position:
               
chr3:74134595-74134850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
57, 132
               

               
Conread position:
               
138-400
               

               
Cow position:
               
chr3:7566529-7566259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 125
               

               
Conread position:
               
138-401
               

               
Cow position:
               
chr3:83988427-83988697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
57, 9
               

               
Conread position:
               
138-413
               

               
Cow position:
               
chr3:15951016-15950741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
138-413
               

               
Cow position:
               
chr3:22165522-22165239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 123
               

               
Conread position:
               
138-415
               

               
Cow position:
               
chr3:54506599-54506884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
138-416
               

               
Cow position:
               
chr3:74234086-74234360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
141, 49
               

               
Conread position:
               
138-417
               

               
Cow position:
               
chr3:82019947-82019662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
138-418
               

               
Cow position:
               
chr3:3316917-3316627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
141, 46
               

               
Conread position:
               
138-420
               

               
Cow position:
               
chr3:45881799-45882082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
141, 48
               

               
Conread position:
               
138-421
               

               
Cow position:
               
chr3:18059597-18059887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
138-421
               

               
Cow position:
               
chr3:30009018-30008723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
138-421
               

               
Cow position:
               
chr3:45211190-45211487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
42, 131
               

               
Conread position:
               
138-422
               

               
Cow position:
               
chr3:3656409-3656699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
138-423
               

               
Cow position:
               
chr3:16752364-16752068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 122
               

               
Conread position:
               
138-423
               

               
Cow position:
               
chr3:33329709-33330019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 121
               

               
Conread position:
               
139-401
               

               
Cow position:
               
chr3:75238354-75238623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
139-416
               

               
Cow position:
               
chr3:57704219-57704511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
140-343
               

               
Cow position:
               
chr3:55983992-55984199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
140-414
               

               
Cow position:
               
chr3:4268685-4268398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 122
               

               
Conread position:
               
140-420
               

               
Cow position:
               
chr3:80733945-80733667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
139, 43
               

               
Conread position:
               
140-421
               

               
Cow position:
               
chr3:36240003-36240292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 10
               

               
Conread position:
               
140-423
               

               
Cow position:
               
chr3:7763554-7763843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 51
               

               
Conread position:
               
141-331
               

               
Cow position:
               
chr3:35874069-35873884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
141-408
               

               
Cow position:
               
chr3:73837818-73837548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
142-295
               

               
Cow position:
               
chr3:12670716-12670562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
142-343
               

               
Cow position:
               
chr3:26229996-26230210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
142-358
               

               
Cow position:
               
chr3:73460863-73461082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
144-404
               

               
Cow position:
               
chr3:10668979-10668713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
145-397
               

               
Cow position:
               
chr3:16656586-16656326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
115, 35
               

               
Conread position:
               
146-331
               

               
Cow position:
               
chr3:74088796-74088612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
146-384
               

               
Cow position:
               
chr3:52608083-52608324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
146-415
               

               
Cow position:
               
chr3:48362980-48363247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
147-420
               

               
Cow position:
               
chr3:75778157-75777886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
148-336
               

               
Cow position:
               
chr3:58767165-58767357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
151-413
               

               
Cow position:
               
chr3:81087724-81087461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
128, 39
               

               
Conread position:
               
152-402
               

               
Cow position:
               
chr3:14546909-14547163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
152-404
               

               
Cow position:
               
chr3:73961790-73961528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
152-419
               

               
Cow position:
               
chr3:7337874-7337605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
152-421
               

               
Cow position:
               
chr3:31350196-31349925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
152-423
               

               
Cow position:
               
chr3:48459423-48459143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
154-319
               

               
Cow position:
               
chr3:81277559-81277391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
154-345
               

               
Cow position:
               
chr3:53704055-53703861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
154-384
               

               
Cow position:
               
chr3:84250633-84250406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
154-412
               

               
Cow position:
               
chr3:71474497-71474232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
154-413
               

               
Cow position:
               
chr3:26792385-26792630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
135, 98
               

               
Conread position:
               
154-419
               

               
Cow position:
               
chr3:23804428-23804684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
131, 40
               

               
Conread position:
               
154-421
               

               
Cow position:
               
chr3:80597634-80597910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
154-423
               

               
Cow position:
               
chr3:21867125-21866853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
137, 17
               

               
Conread position:
               
155-386
               

               
Cow position:
               
chr3:74900726-74900498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
155-414
               

               
Cow position:
               
chr3:53904377-53904612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
156-396
               

               
Cow position:
               
chr3:11640641-11640894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
156-423
               

               
Cow position:
               
chr3:23203322-23203044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
156-423
               

               
Cow position:
               
chr3:66631437-66631157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
157-342
               

               
Cow position:
               
chr3:23667537-23667720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
91, 33
               

               
Conread position:
               
157-414
               

               
Cow position:
               
chr3:84174215-84174480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
157-419
               

               
Cow position:
               
chr3:64196738-64197007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
161-410
               

               
Cow position:
               
chr3:48478114-48477870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
162-419
               

               
Cow position:
               
chr3:36160276-36160019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
162-423
               

               
Cow position:
               
chr3:47316461-47316192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
163-420
               

               
Cow position:
               
chr3:27976606-27976347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
163-423
               

               
Cow position:
               
chr3:76269817-76270074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
164-301
               

               
Cow position:
               
chr3:45222234-45222092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
168-411
               

               
Cow position:
               
chr3:15160451-15160691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
168-416
               

               
Cow position:
               
chr3:29334490-29334232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
171-344
               

               
Cow position:
               
chr3:28258024-28258195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
171-413
               

               
Cow position:
               
chr3:56949157-56948921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
172-378
               

               
Cow position:
               
chr3:2483931-2484138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
172-421
               

               
Cow position:
               
chr3:54067726-54067977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
172-423
               

               
Cow position:
               
chr3:20841942-20841693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
173-343
               

               
Cow position:
               
chr3:28735583-28735412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
173-348
               

               
Cow position:
               
chr3:61467262-61467085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
173-384
               

               
Cow position:
               
chr3:76932175-76931973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
173-418
               

               
Cow position:
               
chr3:39248092-39247852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
174-423
               

               
Cow position:
               
chr3:9026157-9025897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
175-423
               

               
Cow position:
               
chr3:68004768-68004522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
176-341
               

               
Cow position:
               
chr3:56704387-56704222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
176-423
               

               
Cow position:
               
chr3:21641921-21642172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 79
               

               
Conread position:
               
178-348
               

               
Cow position:
               
chr3:36913987-36914159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
178-414
               

               
Cow position:
               
chr3:79272639-79272400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
180-330
               

               
Cow position:
               
chr3:11292313-11292160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
180-404
               

               
Cow position:
               
chr3:12090612-12090843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 11
               

               
Conread position:
               
181-421
               

               
Cow position:
               
chr3:46792321-46792566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
183-421
               

               
Cow position:
               
chr3:45823083-45822836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
184-343
               

               
Cow position:
               
chr3:64373217-64373055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
184-421
               

               
Cow position:
               
chr3:5040365-5040119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
95, 11
               

               
Conread position:
               
184-421
               

               
Cow position:
               
chr3:81234330-81234572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
185-419
               

               
Cow position:
               
chr3:13241137-13240892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
186-326
               

               
Cow position:
               
chr3:11606257-11606404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
186-345
               

               
Cow position:
               
chr3:67959971-67959819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 11
               

               
Conread position:
               
186-347
               

               
Cow position:
               
chr3:7427945-7428103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 69
               

               
Conread position:
               
186-347
               

               
Cow position:
               
chr3:57877508-57877671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
186-348
               

               
Cow position:
               
chr3:21997845-21997682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
186-422
               

               
Cow position:
               
chr3:71423609-71423384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
187-413
               

               
Cow position:
               
chr3:20997059-20996827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
8, 53
               

               
Conread position:
               
188-419
               

               
Cow position:
               
chr3:3556490-3556729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
189-408
               

               
Cow position:
               
chr3:59828447-59828218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 91
               

               
Conread position:
               
190-415
               

               
Cow position:
               
chr3:59702119-59702351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 31
               

               
Conread position:
               
190-417
               

               
Cow position:
               
chr3:74644504-74644739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
190-421
               

               
Cow position:
               
chr3:14770935-14770703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
89, 66
               

               
Conread position:
               
191-335
               

               
Cow position:
               
chr3:68059263-68059407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 65
               

               
Conread position:
               
191-384
               

               
Cow position:
               
chr3:74787380-74787569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
191-413
               

               
Cow position:
               
chr3:2637874-2638109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
191-417
               

               
Cow position:
               
chr3:52487563-52487808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
191-421
               

               
Cow position:
               
chr3:31056065-31055830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 68
               

               
Conread position:
               
191-421
               

               
Cow position:
               
chr3:69650941-69650714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
191-423
               

               
Cow position:
               
chr3:40213085-40212849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
191-423
               

               
Cow position:
               
chr3:41873849-41874092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
192-335
               

               
Cow position:
               
chr3:20515869-20515725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
192-412
               

               
Cow position:
               
chr3:46305415-46305636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
192-415
               

               
Cow position:
               
chr3:16107408-16107198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
192-416
               

               
Cow position:
               
chr3:6182272-6182054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 41
               

               
Conread position:
               
192-423
               

               
Cow position:
               
chr3:5305747-5305989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
193-344
               

               
Cow position:
               
chr3:77589469-77589616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
193-412
               

               
Cow position:
               
chr3:9120795-9121017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
193-412
               

               
Cow position:
               
chr3:73335234-73335454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 71
               

               
Conread position:
               
193-413
               

               
Cow position:
               
chr3:11281716-11281944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
194-336
               

               
Cow position:
               
chr3:11705202-11705345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
194-413
               

               
Cow position:
               
chr3:68303267-68303493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
194-420
               

               
Cow position:
               
chr3:7581766-7581536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
194-423
               

               
Cow position:
               
chr3:1011437-1011677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
195-338
               

               
Cow position:
               
chr3:58940078-58940221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
196-423
               

               
Cow position:
               
chr3:5703131-5703361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
197-421
               

               
Cow position:
               
chr3:11229411-11229187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
198-384
               

               
Cow position:
               
chr3:23753455-23753627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 38
               

               
Conread position:
               
198-415
               

               
Cow position:
               
chr3:82366084-82366307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
198-416
               

               
Cow position:
               
chr3:52456873-52457088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
199-422
               

               
Cow position:
               
chr3:15973522-15973754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 55
               

               
Conread position:
               
201-415
               

               
Cow position:
               
chr3:54905576-54905784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
201-421
               

               
Cow position:
               
chr3:35624586-35624360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
202-419
               

               
Cow position:
               
chr3:84928062-84928288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 52
               

               
Conread position:
               
203-416
               

               
Cow position:
               
chr3:41863584-41863801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
203-421
               

               
Cow position:
               
chr3:6728370-6728138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
203-421
               

               
Cow position:
               
chr3:58452008-58452228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
205-384
               

               
Cow position:
               
chr3:72255457-72255275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
205-420
               

               
Cow position:
               
chr3:84137853-84137632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
205-421
               

               
Cow position:
               
chr3:8814150-8813920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
206-412
               

               
Cow position:
               
chr3:61024060-61023846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
206-421
               

               
Cow position:
               
chr3:83770694-83770917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
208-420
               

               
Cow position:
               
chr3:18831386-18831601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
58, 134
               

               
Conread position:
               
208-422
               

               
Cow position:
               
chr3:28902794-28902578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
209-415
               

               
Cow position:
               
chr3:46559749-46559538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
209-420
               

               
Cow position:
               
chr3:44959908-44960127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 50
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr3:58432478-58432307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
210-420
               

               
Cow position:
               
chr3:24596456-24596250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
210-421
               

               
Cow position:
               
chr3:32317864-32317646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
69, 46
               

               
Conread position:
               
211-405
               

               
Cow position:
               
chr3:70756672-70756472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
211-420
               

               
Cow position:
               
chr3:74127535-74127317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
213-404
               

               
Cow position:
               
chr3:20021239-20021434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
213-423
               

               
Cow position:
               
chr3:77276488-77276280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
214-417
               

               
Cow position:
               
chr3:28897048-28896841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
214-423
               

               
Cow position:
               
chr3:78071821-78071606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
215-421
               

               
Cow position:
               
chr3:7381857-7381649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
216-418
               

               
Cow position:
               
chr3:54557646-54557847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
217-383
               

               
Cow position:
               
chr3:20066179-20066005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 11
               

               
Conread position:
               
217-418
               

               
Cow position:
               
chr3:75966807-75966601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
217-420
               

               
Cow position:
               
chr3:18700137-18699926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
217-422
               

               
Cow position:
               
chr3:13882546-13882334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 5
               

               
Conread position:
               
219-335
               

               
Cow position:
               
chr3:40199319-40199202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
219-404
               

               
Cow position:
               
chr3:80023333-80023149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
219-419
               

               
Cow position:
               
chr3:27246983-27246785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
219-421
               

               
Cow position:
               
chr3:39812027-39812243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
60, 30
               

               
Conread position:
               
219-421
               

               
Cow position:
               
chr3:84807352-84807143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
219-422
               

               
Cow position:
               
chr3:76056309-76056103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
220-420
               

               
Cow position:
               
chr3:32376791-32376994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
220-420
               

               
Cow position:
               
chr3:47199150-47198944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
220-422
               

               
Cow position:
               
chr3:12669113-12669323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
220-422
               

               
Cow position:
               
chr3:56943949-56943745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
59, 39
               

               
Conread position:
               
221-420
               

               
Cow position:
               
chr3:45314322-45314535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
221-422
               

               
Cow position:
               
chr3:79339601-79339392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
222-348
               

               
Cow position:
               
chr3:1534126-1533998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
222-411
               

               
Cow position:
               
chr3:59271812-59272004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
222-413
               

               
Cow position:
               
chr3:70402623-70402814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
222-414
               

               
Cow position:
               
chr3:58101658-58101851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
222-416
               

               
Cow position:
               
chr3:77171294-77171497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
222-420
               

               
Cow position:
               
chr3:59947644-59947850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
222-421
               

               
Cow position:
               
chr3:59317680-59317883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
222-423
               

               
Cow position:
               
chr3:985993-986200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
222-423
               

               
Cow position:
               
chr3:43389149-43388940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 36
               

               
Conread position:
               
223-420
               

               
Cow position:
               
chr3:45743885-45744093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 114
               

               
Conread position:
               
226-404
               

               
Cow position:
               
chr3:62312779-62312964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
226-404
               

               
Cow position:
               
chr3:62370038-62370223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
226-413
               

               
Cow position:
               
chr3:29234699-29234503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
226-417
               

               
Cow position:
               
chr3:59681921-59681727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 38
               

               
Conread position:
               
226-420
               

               
Cow position:
               
chr3:83705554-83705353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 34
               

               
Conread position:
               
226-423
               

               
Cow position:
               
chr3:36412105-36411905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
227-412
               

               
Cow position:
               
chr3:25735922-25735728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
227-414
               

               
Cow position:
               
chr3:79893514-79893320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
6, 11
               

               
Conread position:
               
228-357
               

               
Cow position:
               
chr3:61133622-61133753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 32
               

               
Conread position:
               
233-418
               

               
Cow position:
               
chr3:20911420-20911231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
233-422
               

               
Cow position:
               
chr3:37641315-37641511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
234-344
               

               
Cow position:
               
chr3:2179110-2179220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 25
               

               
Conread position:
               
234-400
               

               
Cow position:
               
chr3:6579479-6579642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
234-422
               

               
Cow position:
               
chr3:26783516-26783322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
234-423
               

               
Cow position:
               
chr3:28884170-28883977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
234-423
               

               
Cow position:
               
chr3:51150119-51150315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
234-423
               

               
Cow position:
               
chr3:81616462-81616264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
45, 35
               

               
Conread position:
               
238-423
               

               
Cow position:
               
chr3:11027269-11027462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
239-342
               

               
Cow position:
               
chr3:4086868-4086764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
239-345
               

               
Cow position:
               
chr3:75772791-75772899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
239-358
               

               
Cow position:
               
chr3:4167279-4167160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
239-382
               

               
Cow position:
               
chr3:35582836-35582982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
239-412
               

               
Cow position:
               
chr3:31352879-31352709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
239-413
               

               
Cow position:
               
chr3:19044770-19044593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
104, 25
               

               
Conread position:
               
239-417
               

               
Cow position:
               
chr3:70333225-70333049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
239-421
               

               
Cow position:
               
chr3:3164114-3163932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 19
               

               
Conread position:
               
239-421
               

               
Cow position:
               
chr3:41366714-41366517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
239-422
               

               
Cow position:
               
chr3:59885536-59885715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
239-422
               

               
Cow position:
               
chr3:62186147-62186343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
239-423
               

               
Cow position:
               
chr3:15859383-15859197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
239-423
               

               
Cow position:
               
chr3:55730473-55730281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
239-423
               

               
Cow position:
               
chr3:80958515-80958324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
240-384
               

               
Cow position:
               
chr3:81401100-81400963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
240-421
               

               
Cow position:
               
chr3:4518186-4518000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
240-422
               

               
Cow position:
               
chr3:76300767-76300958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
240-423
               

               
Cow position:
               
chr3:83934722-83934909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
241-382
               

               
Cow position:
               
chr3:18326832-18326685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 17
               

               
Conread position:
               
241-384
               

               
Cow position:
               
chr3:83199509-83199656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
241-421
               

               
Cow position:
               
chr3:2016433-2016615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
241-421
               

               
Cow position:
               
chr3:37851494-37851679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
242-398
               

               
Cow position:
               
chr3:3401546-3401701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
242-417
               

               
Cow position:
               
chr3:68624213-68624399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
242-421
               

               
Cow position:
               
chr3:14211984-14211803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
242-422
               

               
Cow position:
               
chr3:44594623-44594808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
243-421
               

               
Cow position:
               
chr3:58010829-58010651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
243-422
               

               
Cow position:
               
chr3:28323217-28323395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 16
               

               
Conread position:
               
244-416
               

               
Cow position:
               
chr3:8523154-8522975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
244-421
               

               
Cow position:
               
chr3:79398143-79398328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
244-422
               

               
Cow position:
               
chr3:60186146-60186335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
246-419
               

               
Cow position:
               
chr3:63069363-63069180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
247-405
               

               
Cow position:
               
chr3:67942532-67942366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
247-421
               

               
Cow position:
               
chr3:17039616-17039793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
248-417
               

               
Cow position:
               
chr3:24774658-24774821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
249-421
               

               
Cow position:
               
chr3:64910090-64909911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
251-420
               

               
Cow position:
               
chr3:11607830-11608000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 13
               

               
Conread position:
               
255-412
               

               
Cow position:
               
chr3:621444-621616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
255-413
               

               
Cow position:
               
chr3:42589109-42589275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
255-419
               

               
Cow position:
               
chr3:31804748-31804588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 51
               

               
Conread position:
               
256-414
               

               
Cow position:
               
chr3:3453591-3453759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
256-416
               

               
Cow position:
               
chr3:40344018-40343859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
256-416
               

               
Cow position:
               
chr3:43896048-43895885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
258-412
               

               
Cow position:
               
chr3:42483940-42484101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
259-414
               

               
Cow position:
               
chr3:56754518-56754359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
259-415
               

               
Cow position:
               
chr3:55106134-55105969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
259-422
               

               
Cow position:
               
chr3:47284828-47284986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
263-400
               

               
Cow position:
               
chr3:53552961-53552822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
263-416
               

               
Cow position:
               
chr3:49787577-49787734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
263-421
               

               
Cow position:
               
chr3:73701526-73701682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
16, 76
               

               
Conread position:
               
264-413
               

               
Cow position:
               
chr3:77098803-77098648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
265-413
               

               
Cow position:
               
chr3:22078096-22078254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
269-417
               

               
Cow position:
               
chr3:83325237-83325387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
269-419
               

               
Cow position:
               
chr3:22903728-22903576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
278-421
               

               
Cow position:
               
chr3:78115558-78115407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
278-422
               

               
Cow position:
               
chr3:53249523-53249669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
278-423
               

               
Cow position:
               
chr3:58497692-58497845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
286-421
               

               
Cow position:
               
chr3:42933524-42933666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
286-423
               

               
Cow position:
               
chr3:43091135-43091276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
290-421
               

               
Cow position:
               
chr3:20888615-20888478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
290-421
               

               
Cow position:
               
chr3:42355712-42355847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
290-423
               

               
Cow position:
               
chr3:58562746-58562886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
291-419
               

               
Cow position:
               
chr3:14000502-14000376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
292-416
               

               
Cow position:
               
chr3:49369662-49369788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 8
               

               
Conread position:
               
301-420
               

               
Cow position:
               
chr3:2434679-2434555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               
Show alignments to all cow chromosomes.