Non-Coding RNA Search

Cow genome map


           Conread name:
           rcmu26_a6.y1
        

               Conread position:
               173-485
               

               Cow position:
               chr11:34413079-34413389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               182-485
               

               Cow position:
               chr11:13940445-13940140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               54, 257
               

               Conread position:
               187-480
               

               Cow position:
               chr11:38211894-38211601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               195-482
               

               Cow position:
               chr11:75285513-75285812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 52
               

               Conread position:
               197-484
               

               Cow position:
               chr11:5961549-5961255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 33
               

               Conread position:
               198-479
               

               Cow position:
               chr11:16315109-16314829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               116, 25
               

               Conread position:
               199-404
               

               Cow position:
               chr11:17369768-17369562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               53, 135
               

               Conread position:
               199-469
               

               Cow position:
               chr11:67313025-67312747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               223-483
               

               Cow position:
               chr11:53773901-53773634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               227-446
               

               Cow position:
               chr11:64781300-64781076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               227-479
               

               Cow position:
               chr11:55053076-55052826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               227-480
               

               Cow position:
               chr11:897876-897629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               227-481
               

               Cow position:
               chr11:62889680-62889939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               227-486
               

               Cow position:
               chr11:2907318-2907573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               32, 64
               

               Conread position:
               229-441
               

               Cow position:
               chr11:38334731-38334518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               229-466
               

               Cow position:
               chr11:18699081-18698849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               229-480
               

               Cow position:
               chr11:2925097-2925340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 76
               

               Conread position:
               230-417
               

               Cow position:
               chr11:25968646-25968835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               230-460
               

               Cow position:
               chr11:84764227-84764012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               32, 49
               

               Conread position:
               230-480
               

               Cow position:
               chr11:58594178-58594432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 26
               

               Conread position:
               230-486
               

               Cow position:
               chr11:47899456-47899218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               231-445
               

               Cow position:
               chr11:9699048-9699254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               232-399
               

               Cow position:
               chr11:28078699-28078530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               232-415
               

               Cow position:
               chr11:44176798-44176616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               232-421
               

               Cow position:
               chr11:33369361-33369165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               232-460
               

               Cow position:
               chr11:47784986-47784750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 24
               

               Conread position:
               232-478
               

               Cow position:
               chr11:1625016-1625266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               81, 12
               

               Conread position:
               232-479
               

               Cow position:
               chr11:43914504-43914250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 146
               

               Conread position:
               232-485
               

               Cow position:
               chr11:2084352-2084094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               232-489
               

               Cow position:
               chr11:15772506-15772765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 202
               

               Conread position:
               233-478
               

               Cow position:
               chr11:25119729-25119973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 114
               

               Conread position:
               233-479
               

               Cow position:
               chr11:29308785-29308537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               81, 25
               

               Conread position:
               233-480
               

               Cow position:
               chr11:3175873-3175627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               89, 23
               

               Conread position:
               234-444
               

               Cow position:
               chr11:19578816-19579024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               234-444
               

               Cow position:
               chr11:56115145-56114930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               234-483
               

               Cow position:
               chr11:23407666-23407417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               234-483
               

               Cow position:
               chr11:30355249-30355013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               234-484
               

               Cow position:
               chr11:64044424-64044185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               235-423
               

               Cow position:
               chr11:11483523-11483325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               78, 21
               

               Conread position:
               235-480
               

               Cow position:
               chr11:14470567-14470326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               28, 85
               

               Conread position:
               235-480
               

               Cow position:
               chr11:27404867-27405114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               78, 158
               

               Conread position:
               235-480
               

               Cow position:
               chr11:62239945-62239701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               81, 107
               

               Conread position:
               235-483
               

               Cow position:
               chr11:36914362-36914614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               78, 21
               

               Conread position:
               235-483
               

               Cow position:
               chr11:45742574-45742328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               235-484
               

               Cow position:
               chr11:3597322-3597069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               235-484
               

               Cow position:
               chr11:8670224-8669960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               235-486
               

               Cow position:
               chr11:81300418-81300671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               78, 21
               

               Conread position:
               236-390
               

               Cow position:
               chr11:65431720-65431564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               77, 104
               

               Conread position:
               236-391
               

               Cow position:
               chr11:6784407-6784253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 10
               

               Conread position:
               236-391
               

               Cow position:
               chr11:32586922-32587079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               8, 101
               

               Conread position:
               236-399
               

               Cow position:
               chr11:25620186-25620354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               236-402
               

               Cow position:
               chr11:24551593-24551424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               77, 10
               

               Conread position:
               236-409
               

               Cow position:
               chr11:36847374-36847194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 122
               

               Conread position:
               236-422
               

               Cow position:
               chr11:25721803-25721981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               236-434
               

               Cow position:
               chr11:58186075-58185884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               236-437
               

               Cow position:
               chr11:36361438-36361644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               78, 184
               

               Conread position:
               236-441
               

               Cow position:
               chr11:87171871-87172082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               236-446
               

               Cow position:
               chr11:49396324-49396536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               236-463
               

               Cow position:
               chr11:45350306-45350539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               236-464
               

               Cow position:
               chr11:2900510-2900749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               236-470
               

               Cow position:
               chr11:58173818-58173591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               236-478
               

               Cow position:
               chr11:16801775-16801994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               236-479
               

               Cow position:
               chr11:35536777-35536544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               98, 20
               

               Conread position:
               236-479
               

               Cow position:
               chr11:45435277-45435036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               82, 24
               

               Conread position:
               236-480
               

               Cow position:
               chr11:1932282-1932536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               236-480
               

               Cow position:
               chr11:42067064-42066817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               236-483
               

               Cow position:
               chr11:55744671-55744420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               236-484
               

               Cow position:
               chr11:67911960-67912201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               235, 36
               

               Conread position:
               236-485
               

               Cow position:
               chr11:8437488-8437741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               236-485
               

               Cow position:
               chr11:46746839-46746582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               236-485
               

               Cow position:
               chr11:66572287-66572546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 204
               

               Conread position:
               237-387
               

               Cow position:
               chr11:31525456-31525602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               237-399
               

               Cow position:
               chr11:70821244-70821081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 22
               

               Conread position:
               237-424
               

               Cow position:
               chr11:4411669-4411857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               237-441
               

               Cow position:
               chr11:7571822-7571619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               237-441
               

               Cow position:
               chr11:17517604-17517393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               237-479
               

               Cow position:
               chr11:20762054-20761804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               76, 175
               

               Conread position:
               237-480
               

               Cow position:
               chr11:261057-261312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               237-483
               

               Cow position:
               chr11:30370301-30370062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               77, 35
               

               Conread position:
               237-485
               

               Cow position:
               chr11:25791493-25791742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               238-366
               

               Cow position:
               chr11:63547020-63546891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               100, 76
               

               Conread position:
               238-396
               

               Cow position:
               chr11:4602352-4602192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               238-402
               

               Cow position:
               chr11:64335034-64334870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 53
               

               Conread position:
               238-404
               

               Cow position:
               chr11:33271630-33271462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 111
               

               Conread position:
               238-412
               

               Cow position:
               chr11:75915184-75915017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               238-422
               

               Cow position:
               chr11:35732883-35733070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               238-423
               

               Cow position:
               chr11:26057446-26057638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               238-440
               

               Cow position:
               chr11:49210616-49210826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               75, 124
               

               Conread position:
               238-440
               

               Cow position:
               chr11:66099658-66099867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-441
               

               Cow position:
               chr11:15366779-15366978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               238-441
               

               Cow position:
               chr11:46884579-46884368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               238-445
               

               Cow position:
               chr11:19891037-19890833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 101
               

               Conread position:
               238-455
               

               Cow position:
               chr11:48315198-48315416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               238-459
               

               Cow position:
               chr11:54428820-54428596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               238-466
               

               Cow position:
               chr11:30172501-30172279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               25, 81
               

               Conread position:
               238-467
               

               Cow position:
               chr11:63975334-63975098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               238-477
               

               Cow position:
               chr11:18508824-18509072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               238-477
               

               Cow position:
               chr11:21736110-21736336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               238-478
               

               Cow position:
               chr11:17278482-17278714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               238-479
               

               Cow position:
               chr11:52690326-52690563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               238-479
               

               Cow position:
               chr11:80556421-80556180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               16, 107
               

               Conread position:
               238-479
               

               Cow position:
               chr11:80923127-80923364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               78, 18
               

               Conread position:
               238-480
               

               Cow position:
               chr11:8259278-8259031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               75, 177
               

               Conread position:
               238-480
               

               Cow position:
               chr11:18915212-18914981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               238-480
               

               Cow position:
               chr11:27913488-27913240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               238-480
               

               Cow position:
               chr11:55334120-55333865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               238-480
               

               Cow position:
               chr11:69978163-69977926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-480
               

               Cow position:
               chr11:77013971-77013740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               238-481
               

               Cow position:
               chr11:14649110-14649360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               76, 137
               

               Conread position:
               238-483
               

               Cow position:
               chr11:34646797-34646542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               238-483
               

               Cow position:
               chr11:36182893-36182643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               238-483
               

               Cow position:
               chr11:55911447-55911681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               238-483
               

               Cow position:
               chr11:62620577-62620329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               238-483
               

               Cow position:
               chr11:64105193-64104952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               128, 18
               

               Conread position:
               238-483
               

               Cow position:
               chr11:80893982-80893735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               238-484
               

               Cow position:
               chr11:20194223-20194474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               238-484
               

               Cow position:
               chr11:32254014-32254265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               19, 86
               

               Conread position:
               238-484
               

               Cow position:
               chr11:36112610-36112375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 50
               

               Conread position:
               238-484
               

               Cow position:
               chr11:36940393-36940644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               238-484
               

               Cow position:
               chr11:66041473-66041236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               238-484
               

               Cow position:
               chr11:77745050-77745300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               238-485
               

               Cow position:
               chr11:13500209-13499968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               238-485
               

               Cow position:
               chr11:39462824-39462574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               238-485
               

               Cow position:
               chr11:62742446-62742691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               21, 100
               

               Conread position:
               238-491
               

               Cow position:
               chr11:30476194-30475937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               238-548
               

               Cow position:
               chr11:37435786-37436091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 18
               

               Conread position:
               239-404
               

               Cow position:
               chr11:81340346-81340509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               109, 17
               

               Conread position:
               239-417
               

               Cow position:
               chr11:7617007-7617188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               239-422
               

               Cow position:
               chr11:63849752-63849938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               239-423
               

               Cow position:
               chr11:41576673-41576859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               79, 157
               

               Conread position:
               239-427
               

               Cow position:
               chr11:6319931-6320124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               239-433
               

               Cow position:
               chr11:81065850-81066047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               100, 75
               

               Conread position:
               239-441
               

               Cow position:
               chr11:12555105-12555311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               77, 17
               

               Conread position:
               239-441
               

               Cow position:
               chr11:36521080-36520869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               74, 175
               

               Conread position:
               239-471
               

               Cow position:
               chr11:32260731-32260499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               72, 137
               

               Conread position:
               239-474
               

               Cow position:
               chr11:66939391-66939630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               74, 187
               

               Conread position:
               239-480
               

               Cow position:
               chr11:17889528-17889775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               239-480
               

               Cow position:
               chr11:33347999-33348230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               79, 66
               

               Conread position:
               239-480
               

               Cow position:
               chr11:40395635-40395394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               239-483
               

               Cow position:
               chr11:30830423-30830661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               239-484
               

               Cow position:
               chr11:1067239-1067489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               75, 28
               

               Conread position:
               239-484
               

               Cow position:
               chr11:59024153-59024408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 170
               

               Conread position:
               239-484
               

               Cow position:
               chr11:70756672-70756432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               239-489
               

               Cow position:
               chr11:71111098-71110839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 243
               

               Conread position:
               240-371
               

               Cow position:
               chr11:80824102-80823974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               240-377
               

               Cow position:
               chr11:43736908-43737049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 129
               

               Conread position:
               240-421
               

               Cow position:
               chr11:15591281-15591460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               73, 96
               

               Conread position:
               240-440
               

               Cow position:
               chr11:57767387-57767186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               240-468
               

               Cow position:
               chr11:30894804-30895036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               240-476
               

               Cow position:
               chr11:7874340-7874098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               26, 129
               

               Conread position:
               240-478
               

               Cow position:
               chr11:2575709-2575946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               240-478
               

               Cow position:
               chr11:5417085-5416842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               240-478
               

               Cow position:
               chr11:36978006-36977764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               73, 185
               

               Conread position:
               240-478
               

               Cow position:
               chr11:48296227-48295991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 61
               

               Conread position:
               240-479
               

               Cow position:
               chr11:16342049-16342272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               240-480
               

               Cow position:
               chr11:4225281-4225053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               240-483
               

               Cow position:
               chr11:6245518-6245271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               240-484
               

               Cow position:
               chr11:6643013-6642764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               74, 135
               

               Conread position:
               240-485
               

               Cow position:
               chr11:27248687-27248444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               74, 100
               

               Conread position:
               241-361
               

               Cow position:
               chr11:6638805-6638924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               241-420
               

               Cow position:
               chr11:30857233-30857052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               82, 77
               

               Conread position:
               241-426
               

               Cow position:
               chr11:13684523-13684701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               241-433
               

               Cow position:
               chr11:45631583-45631763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               241-445
               

               Cow position:
               chr11:36092723-36092925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               241-455
               

               Cow position:
               chr11:63478559-63478358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               241-468
               

               Cow position:
               chr11:35212971-35213200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               241-480
               

               Cow position:
               chr11:62811493-62811253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               241-481
               

               Cow position:
               chr11:49255609-49255359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               21, 155
               

               Conread position:
               241-483
               

               Cow position:
               chr11:48086116-48085871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               96, 77
               

               Conread position:
               241-483
               

               Cow position:
               chr11:80639354-80639597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               192, 60
               

               Conread position:
               241-484
               

               Cow position:
               chr11:1380875-1380627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               241-484
               

               Cow position:
               chr11:11125862-11125615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 15
               

               Conread position:
               241-484
               

               Cow position:
               chr11:83398105-83397858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 240
               

               Conread position:
               241-485
               

               Cow position:
               chr11:17036334-17036576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               104, 77
               

               Conread position:
               241-485
               

               Cow position:
               chr11:19591798-19592042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               242-404
               

               Cow position:
               chr11:57170413-57170567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               242-435
               

               Cow position:
               chr11:81143348-81143542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               97, 14
               

               Conread position:
               242-470
               

               Cow position:
               chr11:47837518-47837286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               242-479
               

               Cow position:
               chr11:20238873-20238633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               242-479
               

               Cow position:
               chr11:34121408-34121155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 101
               

               Conread position:
               242-494
               

               Cow position:
               chr11:71854084-71854335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               18, 140
               

               Conread position:
               243-424
               

               Cow position:
               chr11:75388181-75388363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               140, 75
               

               Conread position:
               243-446
               

               Cow position:
               chr11:15017254-15017046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               243-480
               

               Cow position:
               chr11:35724168-35723926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 127
               

               Conread position:
               244-440
               

               Cow position:
               chr11:1485040-1485231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 16
               

               Conread position:
               244-466
               

               Cow position:
               chr11:30494184-30493966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               244-478
               

               Cow position:
               chr11:70951062-70950828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               244-480
               

               Cow position:
               chr11:7385629-7385394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 90
               

               Conread position:
               244-483
               

               Cow position:
               chr11:62789323-62789083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               244-484
               

               Cow position:
               chr11:40818439-40818675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               70, 12
               

               Conread position:
               245-387
               

               Cow position:
               chr11:57874002-57873858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 142
               

               Conread position:
               245-397
               

               Cow position:
               chr11:82732956-82733111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               245-423
               

               Cow position:
               chr11:37042169-37041984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               245-444
               

               Cow position:
               chr11:22884600-22884405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               245-476
               

               Cow position:
               chr11:52380678-52380912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               245-479
               

               Cow position:
               chr11:15339249-15339020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               245-479
               

               Cow position:
               chr11:47725083-47724861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               245-480
               

               Cow position:
               chr11:17321861-17321603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 125
               

               Conread position:
               245-484
               

               Cow position:
               chr11:50472512-50472269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 202
               

               Conread position:
               245-485
               

               Cow position:
               chr11:38236439-38236202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               246-376
               

               Cow position:
               chr11:73076229-73076355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-391
               

               Cow position:
               chr11:63977248-63977102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               68, 94
               

               Conread position:
               246-394
               

               Cow position:
               chr11:62655884-62655735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 77
               

               Conread position:
               246-396
               

               Cow position:
               chr11:68592212-68592057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               246-404
               

               Cow position:
               chr11:33824721-33824874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-423
               

               Cow position:
               chr11:74839796-74839623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               246-427
               

               Cow position:
               chr11:77241895-77241714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 85
               

               Conread position:
               246-434
               

               Cow position:
               chr11:70600634-70600827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               246-441
               

               Cow position:
               chr11:1980072-1980273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               67, 107
               

               Conread position:
               246-441
               

               Cow position:
               chr11:68326669-68326869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               67, 122
               

               Conread position:
               246-466
               

               Cow position:
               chr11:63382004-63382221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-470
               

               Cow position:
               chr11:30165704-30165476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 206
               

               Conread position:
               246-470
               

               Cow position:
               chr11:71492671-71492894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               68, 29
               

               Conread position:
               246-477
               

               Cow position:
               chr11:15632367-15632595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               73, 148
               

               Conread position:
               246-478
               

               Cow position:
               chr11:46922694-46922928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 86
               

               Conread position:
               246-480
               

               Cow position:
               chr11:27461918-27462142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-480
               

               Cow position:
               chr11:31228146-31227918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               246-480
               

               Cow position:
               chr11:52297030-52297263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               68, 82
               

               Conread position:
               246-483
               

               Cow position:
               chr11:30192371-30192128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               68, 44
               

               Conread position:
               246-483
               

               Cow position:
               chr11:62663048-62663279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               33, 45
               

               Conread position:
               246-484
               

               Cow position:
               chr11:41363-41130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               147, 64
               

               Conread position:
               246-484
               

               Cow position:
               chr11:17227459-17227691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               224, 17
               

               Conread position:
               246-484
               

               Cow position:
               chr11:67614732-67614971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               67, 92
               

               Conread position:
               246-484
               

               Cow position:
               chr11:70483658-70483901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               93, 69
               

               Conread position:
               246-485
               

               Cow position:
               chr11:30638759-30638999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               246-485
               

               Cow position:
               chr11:42083646-42083423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-486
               

               Cow position:
               chr11:53510302-53510550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               247-394
               

               Cow position:
               chr11:20093838-20093694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               71, 61
               

               Conread position:
               247-404
               

               Cow position:
               chr11:2937480-2937632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               247-407
               

               Cow position:
               chr11:4653068-4653226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               247-425
               

               Cow position:
               chr11:36104509-36104323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 25
               

               Conread position:
               247-427
               

               Cow position:
               chr11:74152557-74152746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               247-441
               

               Cow position:
               chr11:66685718-66685911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               160, 71
               

               Conread position:
               247-445
               

               Cow position:
               chr11:46784655-46784465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               247-470
               

               Cow position:
               chr11:77705942-77705724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               66, 139
               

               Conread position:
               247-477
               

               Cow position:
               chr11:70251106-70250873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               247-480
               

               Cow position:
               chr11:10992450-10992223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               66, 27
               

               Conread position:
               247-483
               

               Cow position:
               chr11:80564490-80564246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               15, 121
               

               Conread position:
               247-484
               

               Cow position:
               chr11:49057575-49057355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               248-424
               

               Cow position:
               chr11:68570190-68570369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               248-445
               

               Cow position:
               chr11:2484605-2484804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               66, 32
               

               Conread position:
               248-454
               

               Cow position:
               chr11:17195625-17195849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               62, 39
               

               Conread position:
               248-465
               

               Cow position:
               chr11:17638327-17638564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               248-476
               

               Cow position:
               chr11:27747109-27746883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               89, 70
               

               Conread position:
               248-479
               

               Cow position:
               chr11:42159871-42160098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               248-480
               

               Cow position:
               chr11:375651-375415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               12, 160
               

               Conread position:
               248-483
               

               Cow position:
               chr11:29699496-29699747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               66, 205
               

               Conread position:
               248-483
               

               Cow position:
               chr11:31024610-31024854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               248-486
               

               Cow position:
               chr11:37804361-37804604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               249-470
               

               Cow position:
               chr11:9270548-9270759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               249-479
               

               Cow position:
               chr11:55494854-55494636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               249-480
               

               Cow position:
               chr11:40608404-40608638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               249-483
               

               Cow position:
               chr11:11533745-11533974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 72
               

               Conread position:
               249-483
               

               Cow position:
               chr11:83043177-83043410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               249-484
               

               Cow position:
               chr11:258983-259221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               28, 91
               

               Conread position:
               249-484
               

               Cow position:
               chr11:49153131-49152902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               249-488
               

               Cow position:
               chr11:35669776-35670004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               69, 39
               

               Conread position:
               250-397
               

               Cow position:
               chr11:73638044-73637893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 135
               

               Conread position:
               250-416
               

               Cow position:
               chr11:65495155-65495320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               250-466
               

               Cow position:
               chr11:71022189-71021970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               48, 71
               

               Conread position:
               250-472
               

               Cow position:
               chr11:69417592-69417367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 180
               

               Conread position:
               250-483
               

               Cow position:
               chr11:30867366-30867136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               250-483
               

               Cow position:
               chr11:49872698-49872932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               63, 167
               

               Conread position:
               250-484
               

               Cow position:
               chr11:11558357-11558124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 28
               

               Conread position:
               250-484
               

               Cow position:
               chr11:41437996-41438235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               251-397
               

               Cow position:
               chr11:81928324-81928469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               42, 68
               

               Conread position:
               251-417
               

               Cow position:
               chr11:81175786-81175615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               251-427
               

               Cow position:
               chr11:80296671-80296844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 36
               

               Conread position:
               251-428
               

               Cow position:
               chr11:30485845-30485659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               251-434
               

               Cow position:
               chr11:42206604-42206423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               251-434
               

               Cow position:
               chr11:85186340-85186526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               251-480
               

               Cow position:
               chr11:67600966-67600740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               251-483
               

               Cow position:
               chr11:44223069-44222842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               59, 32
               

               Conread position:
               251-488
               

               Cow position:
               chr11:18924935-18924694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 117
               

               Conread position:
               252-404
               

               Cow position:
               chr11:9691196-9691036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 42
               

               Conread position:
               252-412
               

               Cow position:
               chr11:42183226-42183055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               252-417
               

               Cow position:
               chr11:8421938-8422099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               252-423
               

               Cow position:
               chr11:23278776-23278952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               252-424
               

               Cow position:
               chr11:62483787-62483950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               252-425
               

               Cow position:
               chr11:69676168-69676342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 48
               

               Conread position:
               252-434
               

               Cow position:
               chr11:80007875-80008066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               61, 121
               

               Conread position:
               252-436
               

               Cow position:
               chr11:71814889-71814707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 88
               

               Conread position:
               252-440
               

               Cow position:
               chr11:49149233-49149044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               64, 89
               

               Conread position:
               252-466
               

               Cow position:
               chr11:70206502-70206290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               80, 66
               

               Conread position:
               252-469
               

               Cow position:
               chr11:3896511-3896732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               61, 189
               

               Conread position:
               252-478
               

               Cow position:
               chr11:39060418-39060644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 130
               

               Conread position:
               252-480
               

               Cow position:
               chr11:63998903-63999132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 199
               

               Conread position:
               252-480
               

               Cow position:
               chr11:70978548-70978778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               252-480
               

               Cow position:
               chr11:72884426-72884638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               252-483
               

               Cow position:
               chr11:4636986-4637219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               11, 77
               

               Conread position:
               252-483
               

               Cow position:
               chr11:21728102-21728323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               181, 25
               

               Conread position:
               252-483
               

               Cow position:
               chr11:30964530-30964299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 135
               

               Conread position:
               252-484
               

               Cow position:
               chr11:80412822-80413063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               63, 185
               

               Conread position:
               252-486
               

               Cow position:
               chr11:43360600-43360825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               253-389
               

               Cow position:
               chr11:49568050-49568185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               92, 21
               

               Conread position:
               253-409
               

               Cow position:
               chr11:63484126-63483969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               253-462
               

               Cow position:
               chr11:63165465-63165673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               60, 66
               

               Conread position:
               253-478
               

               Cow position:
               chr11:51195910-51196117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               253-479
               

               Cow position:
               chr11:65762399-65762640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               253-480
               

               Cow position:
               chr11:32398827-32398594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 132
               

               Conread position:
               253-483
               

               Cow position:
               chr11:17721615-17721849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               253-483
               

               Cow position:
               chr11:50152626-50152861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               253-489
               

               Cow position:
               chr11:17859967-17860209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 139
               

               Conread position:
               254-480
               

               Cow position:
               chr11:18447316-18447536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               255-464
               

               Cow position:
               chr11:30842841-30843047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               77, 33
               

               Conread position:
               255-485
               

               Cow position:
               chr11:78380885-78381110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               256-378
               

               Cow position:
               chr11:10620109-10620230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-397
               

               Cow position:
               chr11:12768579-12768437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 98
               

               Conread position:
               256-401
               

               Cow position:
               chr11:2830839-2830691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-421
               

               Cow position:
               chr11:53651823-53651655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               256-421
               

               Cow position:
               chr11:54872577-54872745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               256-437
               

               Cow position:
               chr11:26535967-26535786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               67, 129
               

               Conread position:
               256-437
               

               Cow position:
               chr11:67948574-67948743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               256-440
               

               Cow position:
               chr11:30986819-30986637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               58, 74
               

               Conread position:
               256-440
               

               Cow position:
               chr11:63498948-63499131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 92
               

               Conread position:
               256-441
               

               Cow position:
               chr11:37099989-37100174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 159
               

               Conread position:
               256-441
               

               Cow position:
               chr11:86895555-86895371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               256-458
               

               Cow position:
               chr11:74316889-74316687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               58, 75
               

               Conread position:
               256-470
               

               Cow position:
               chr11:35351850-35352073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 169
               

               Conread position:
               256-477
               

               Cow position:
               chr11:17676192-17676414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               256-477
               

               Cow position:
               chr11:21886013-21885792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               256-479
               

               Cow position:
               chr11:35580444-35580216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-479
               

               Cow position:
               chr11:53778803-53778573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-480
               

               Cow position:
               chr11:20205675-20205896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               256-480
               

               Cow position:
               chr11:44032189-44031961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               192, 31
               

               Conread position:
               256-480
               

               Cow position:
               chr11:62812769-62812994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               256-480
               

               Cow position:
               chr11:67615069-67615291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               256-480
               

               Cow position:
               chr11:68913326-68913096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 202
               

               Conread position:
               256-480
               

               Cow position:
               chr11:83032860-83032636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               94, 58
               

               Conread position:
               256-480
               

               Cow position:
               chr11:83323760-83323519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               256-483
               

               Cow position:
               chr11:2917410-2917633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               256-483
               

               Cow position:
               chr11:5201463-5201699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               256-483
               

               Cow position:
               chr11:13592922-13592688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-483
               

               Cow position:
               chr11:29960475-29960251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 24
               

               Conread position:
               256-483
               

               Cow position:
               chr11:41215916-41215685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               256-483
               

               Cow position:
               chr11:63470041-63469828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               15, 59
               

               Conread position:
               256-483
               

               Cow position:
               chr11:65157222-65157456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               256-483
               

               Cow position:
               chr11:82740675-82740462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               256-484
               

               Cow position:
               chr11:41985865-41986094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               256-485
               

               Cow position:
               chr11:3740147-3739904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-485
               

               Cow position:
               chr11:6233695-6233929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-485
               

               Cow position:
               chr11:10956691-10956923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               57, 97
               

               Conread position:
               256-485
               

               Cow position:
               chr11:35347568-35347802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 112
               

               Conread position:
               256-486
               

               Cow position:
               chr11:80819842-80820053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               256-493
               

               Cow position:
               chr11:15382312-15382562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               257-424
               

               Cow position:
               chr11:4621253-4621419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               257-441
               

               Cow position:
               chr11:21830029-21830215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               71, 61
               

               Conread position:
               257-480
               

               Cow position:
               chr11:15285442-15285659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               61, 48
               

               Conread position:
               257-480
               

               Cow position:
               chr11:24602141-24601920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               9, 36
               

               Conread position:
               257-480
               

               Cow position:
               chr11:39250146-39249928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               82, 28
               

               Conread position:
               257-484
               

               Cow position:
               chr11:33409084-33409309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               57, 30
               

               Conread position:
               258-420
               

               Cow position:
               chr11:53486979-53487138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               35, 61
               

               Conread position:
               258-423
               

               Cow position:
               chr11:47110437-47110261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               258-440
               

               Cow position:
               chr11:6255828-6256007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               56, 74
               

               Conread position:
               258-470
               

               Cow position:
               chr11:29786312-29786533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               258-480
               

               Cow position:
               chr11:71390393-71390605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               259-421
               

               Cow position:
               chr11:78672853-78672685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               259-485
               

               Cow position:
               chr11:81134989-81135219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 84
               

               Conread position:
               259-486
               

               Cow position:
               chr11:19247025-19247249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 35
               

               Conread position:
               260-427
               

               Cow position:
               chr11:29782336-29782174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               54, 36
               

               Conread position:
               260-437
               

               Cow position:
               chr11:63485111-63484936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               260-443
               

               Cow position:
               chr11:66104214-66104403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               123, 58
               

               Conread position:
               260-479
               

               Cow position:
               chr11:48544615-48544390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               111, 58
               

               Conread position:
               260-480
               

               Cow position:
               chr11:4199453-4199227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               56, 162
               

               Conread position:
               260-480
               

               Cow position:
               chr11:21843960-21844176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               54, 123
               

               Conread position:
               260-480
               

               Cow position:
               chr11:24599220-24599431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               260-480
               

               Cow position:
               chr11:51729453-51729242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               260-484
               

               Cow position:
               chr11:30209644-30209868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               54, 30
               

               Conread position:
               260-484
               

               Cow position:
               chr11:72292740-72292502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               260-485
               

               Cow position:
               chr11:39619871-39620088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               11, 90
               

               Conread position:
               261-379
               

               Cow position:
               chr11:6154746-6154627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               261-483
               

               Cow position:
               chr11:8988052-8988277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               262-399
               

               Cow position:
               chr11:85985872-85986013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               262-476
               

               Cow position:
               chr11:48248023-48248256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               262-486
               

               Cow position:
               chr11:8462183-8461954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 113
               

               Conread position:
               264-484
               

               Cow position:
               chr11:26274791-26275004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               264-484
               

               Cow position:
               chr11:58927748-58927535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               157, 54
               

               Conread position:
               265-427
               

               Cow position:
               chr11:15278844-15279004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               267-483
               

               Cow position:
               chr11:18852075-18851861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 54
               

               Conread position:
               269-399
               

               Cow position:
               chr11:34144749-34144888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               270-432
               

               Cow position:
               chr11:33289300-33289451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               270-439
               

               Cow position:
               chr11:49207880-49207707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 144
               

               Conread position:
               270-440
               

               Cow position:
               chr11:60720285-60720460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               270-446
               

               Cow position:
               chr11:2836029-2835848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               270-464
               

               Cow position:
               chr11:28993579-28993765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               43, 72
               

               Conread position:
               270-478
               

               Cow position:
               chr11:8524949-8525155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               44, 71
               

               Conread position:
               270-478
               

               Cow position:
               chr11:34467731-34467529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               270-479
               

               Cow position:
               chr11:77319581-77319371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               270-480
               

               Cow position:
               chr11:13042979-13043190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               270-480
               

               Cow position:
               chr11:42296458-42296664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               270-480
               

               Cow position:
               chr11:48474878-48474659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               270-480
               

               Cow position:
               chr11:63435691-63435477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 155
               

               Conread position:
               270-483
               

               Cow position:
               chr11:17083144-17083357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               167
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               270-483
               

               Cow position:
               chr11:39854853-39855061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               270-483
               

               Cow position:
               chr11:47772213-47772437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               271-470
               

               Cow position:
               chr11:73353899-73354094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               272-437
               

               Cow position:
               chr11:83066659-83066486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               272-479
               

               Cow position:
               chr11:11469489-11469691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               42, 11
               

               Conread position:
               272-480
               

               Cow position:
               chr11:17493648-17493434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               272-487
               

               Cow position:
               chr11:36920411-36920628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               273-483
               

               Cow position:
               chr11:18910718-18910924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               275-486
               

               Cow position:
               chr11:35791655-35791873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               6, 101
               

               Conread position:
               279-480
               

               Cow position:
               chr11:39499515-39499312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               280-411
               

               Cow position:
               chr11:62081813-62081943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               284-480
               

               Cow position:
               chr11:87155676-87155476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               30, 150
               

               Conread position:
               285-485
               

               Cow position:
               chr11:85271589-85271787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               286-479
               

               Cow position:
               chr11:45646440-45646636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 126
               

               Conread position:
               287-475
               

               Cow position:
               chr11:31410728-31410917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               27, 53
               

               Conread position:
               288-483
               

               Cow position:
               chr11:68206695-68206891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 30
               

               Conread position:
               291-484
               

               Cow position:
               chr11:3393066-3393257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               301-485
               

               Cow position:
               chr11:34113400-34113212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               303-484
               

               Cow position:
               chr11:59873059-59872882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               317-485
               

               Cow position:
               chr11:11523338-11523508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               319-465
               

               Cow position:
               chr11:79018942-79019088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-470
               

               Cow position:
               chr11:377526-377676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               319-480
               

               Cow position:
               chr11:16906934-16907093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               109, 94
               

               Conread position:
               319-480
               

               Cow position:
               chr11:44234472-44234311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-483
               

               Cow position:
               chr11:1070972-1071138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               319-483
               

               Cow position:
               chr11:3234192-3234028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-484
               

               Cow position:
               chr11:26845478-26845642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               319-484
               

               Cow position:
               chr11:35803251-35803085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               319-485
               

               Cow position:
               chr11:40573217-40573382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               320-453
               

               Cow position:
               chr11:8107560-8107427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               320-470
               

               Cow position:
               chr11:6633826-6633676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-478
               

               Cow position:
               chr11:30955116-30954958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-479
               

               Cow position:
               chr11:54334444-54334285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-479
               

               Cow position:
               chr11:73924445-73924606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               320-480
               

               Cow position:
               chr11:25387183-25387022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 25
               

               Conread position:
               320-480
               

               Cow position:
               chr11:35684384-35684545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               320-480
               

               Cow position:
               chr11:36658708-36658863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               320-480
               

               Cow position:
               chr11:41293702-41293862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-480
               

               Cow position:
               chr11:48272316-48272156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-480
               

               Cow position:
               chr11:56290627-56290467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-480
               

               Cow position:
               chr11:59702605-59702442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               63, 20
               

               Conread position:
               320-483
               

               Cow position:
               chr11:19606694-19606530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               320-483
               

               Cow position:
               chr11:33341030-33341192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               320-486
               

               Cow position:
               chr11:2092445-2092286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               17, 46
               

               Conread position:
               321-470
               

               Cow position:
               chr11:53717691-53717841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               321-479
               

               Cow position:
               chr11:69076025-69075868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               321-480
               

               Cow position:
               chr11:48496480-48496641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               114, 16
               

               Conread position:
               322-478
               

               Cow position:
               chr11:3790956-3790794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               322-479
               

               Cow position:
               chr11:44636641-44636798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               145, 25
               

               Conread position:
               322-482
               

               Cow position:
               chr11:18587482-18587642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               324-466
               

               Cow position:
               chr11:23586750-23586608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               324-483
               

               Cow position:
               chr11:28644199-28644040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               324-483
               

               Cow position:
               chr11:69119406-69119246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               325-478
               

               Cow position:
               chr11:57491375-57491522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               325-480
               

               Cow position:
               chr11:62150783-62150935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               325-482
               

               Cow position:
               chr11:63909556-63909710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               325-485
               

               Cow position:
               chr11:83033129-83033287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               153, 50
               

               Conread position:
               326-477
               

               Cow position:
               chr11:47545246-47545093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               326-480
               

               Cow position:
               chr11:22747221-22747372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               117, 99
               

               Conread position:
               327-484
               

               Cow position:
               chr11:62609713-62609558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               327-498
               

               Cow position:
               chr11:47882913-47882742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 153
               

               Conread position:
               329-479
               

               Cow position:
               chr11:36328933-36329078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               329-479
               

               Cow position:
               chr11:82730891-82731041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               329-480
               

               Cow position:
               chr11:36238884-36238735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               142, 81
               

               Conread position:
               330-479
               

               Cow position:
               chr11:43898244-43898096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               332-480
               

               Cow position:
               chr11:62376370-62376517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               334-470
               

               Cow position:
               chr11:76114744-76114612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               334-483
               

               Cow position:
               chr11:41809391-41809540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               334-483
               

               Cow position:
               chr11:83230299-83230447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               335-477
               

               Cow position:
               chr11:32690870-32691013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               336-471
               

               Cow position:
               chr11:8428609-8428476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               336-480
               

               Cow position:
               chr11:64089998-64090142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               138, 16
               

               Conread position:
               337-434
               

               Cow position:
               chr11:25320284-25320187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               338-477
               

               Cow position:
               chr11:13075714-13075842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               338-480
               

               Cow position:
               chr11:23128442-23128584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               339-470
               

               Cow position:
               chr11:29946817-29946948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               340-480
               

               Cow position:
               chr11:6194302-6194161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               340-480
               

               Cow position:
               chr11:16842892-16843028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               340-483
               

               Cow position:
               chr11:65767295-65767152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               340-485
               

               Cow position:
               chr11:22499271-22499415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               130, 73
               

               Conread position:
               342-480
               

               Cow position:
               chr11:64406322-64406184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               343-480
               

               Cow position:
               chr11:52983767-52983631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               345-483
               

               Cow position:
               chr11:35873912-35874050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               345-483
               

               Cow position:
               chr11:53553306-53553172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               346-481
               

               Cow position:
               chr11:28168333-28168467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               347-483
               

               Cow position:
               chr11:76822000-76822133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               349-479
               

               Cow position:
               chr11:30484006-30483876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-480
               

               Cow position:
               chr11:31352465-31352596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-480
               

               Cow position:
               chr11:53279628-53279756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 0
               
Show alignments to all cow chromosomes.
Conread position:	173-485
Cow position:	chr11:34413079-34413389 (view UCSC Genome Browser custom track)
Alignm length:	313
Alignm identity:	118
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	164, 0
Conread position:	182-485
Cow position:	chr11:13940445-13940140 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	205
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	54, 257
Conread position:	187-480
Cow position:	chr11:38211894-38211601 (view UCSC Genome Browser custom track)
Alignm length:	296
Alignm identity:	206
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	15, 26
Conread position:	195-482
Cow position:	chr11:75285513-75285812 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	202
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	28, 52
Conread position:	197-484
Cow position:	chr11:5961549-5961255 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	191
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	60, 33
Conread position:	198-479
Cow position:	chr11:16315109-16314829 (view UCSC Genome Browser custom track)
Alignm length:	288
Alignm identity:	199
Alignm E-value:	5e-33
Alignm gaps (pig, cow):	116, 25
Conread position:	199-404
Cow position:	chr11:17369768-17369562 (view UCSC Genome Browser custom track)
Alignm length:	211
Alignm identity:	149
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	53, 135
Conread position:	199-469
Cow position:	chr11:67313025-67312747 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	195
Alignm E-value:	7e-26
Alignm gaps (pig, cow):	24, 13
Conread position:	223-483
Cow position:	chr11:53773901-53773634 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	177
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	34, 12
Conread position:	227-446
Cow position:	chr11:64781300-64781076 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	152
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	90, 0
Conread position:	227-479
Cow position:	chr11:55053076-55052826 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	185
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	35, 67
Conread position:	227-480
Cow position:	chr11:897876-897629 (view UCSC Genome Browser custom track)
Alignm length:	254
Alignm identity:	191
Alignm E-value:	0
Alignm gaps (pig, cow):	60, 0
Conread position:	227-481
Cow position:	chr11:62889680-62889939 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	174
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	87, 0
Conread position:	227-486
Cow position:	chr11:2907318-2907573 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	194
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	32, 64
Conread position:	229-441
Cow position:	chr11:38334731-38334518 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	148
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	9, 28
Conread position:	229-466
Cow position:	chr11:18699081-18698849 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	162
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	7, 29
Conread position:	229-480
Cow position:	chr11:2925097-2925340 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	176
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	29, 76
Conread position:	230-417
Cow position:	chr11:25968646-25968835 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	137
Alignm E-value:	5e-23
Alignm gaps (pig, cow):	84, 26
Conread position:	230-460
Cow position:	chr11:84764227-84764012 (view UCSC Genome Browser custom track)
Alignm length:	232
Alignm identity:	164
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	32, 49
Conread position:	230-480
Cow position:	chr11:58594178-58594432 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	171
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	84, 26