• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rcmu26_a6.y1
        

               
Conread position:
               
185-475
               

               
Cow position:
               
chr18:43283515-43283811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 192
               

               
Conread position:
               
196-434
               

               
Cow position:
               
chr18:35715383-35715625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
197-466
               

               
Cow position:
               
chr18:31672295-31672557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
210-485
               

               
Cow position:
               
chr18:34219693-34219988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
217-483
               

               
Cow position:
               
chr18:51594611-51594867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
219-478
               

               
Cow position:
               
chr18:7965437-7965174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 157
               

               
Conread position:
               
223-399
               

               
Cow position:
               
chr18:42967304-42967133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
224-462
               

               
Cow position:
               
chr18:4851285-4851521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
225-396
               

               
Cow position:
               
chr18:2553724-2553893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 31
               

               
Conread position:
               
225-407
               

               
Cow position:
               
chr18:4485792-4485612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
226-486
               

               
Cow position:
               
chr18:10954659-10954403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
227-466
               

               
Cow position:
               
chr18:12584645-12584885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
227-483
               

               
Cow position:
               
chr18:29957986-29958227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
227-484
               

               
Cow position:
               
chr18:26939163-26938919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
228-480
               

               
Cow position:
               
chr18:6310273-6310023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
228-484
               

               
Cow position:
               
chr18:18844205-18843950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 86
               

               
Conread position:
               
228-485
               

               
Cow position:
               
chr18:43951021-43950761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
229-416
               

               
Cow position:
               
chr18:21050893-21051079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
230-421
               

               
Cow position:
               
chr18:44205901-44206085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
230-434
               

               
Cow position:
               
chr18:39860587-39860785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
230-480
               

               
Cow position:
               
chr18:52877541-52877301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
231-480
               

               
Cow position:
               
chr18:43555321-43555584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
232-467
               

               
Cow position:
               
chr18:4152364-4152601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
233-409
               

               
Cow position:
               
chr18:23380314-23380142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
233-477
               

               
Cow position:
               
chr18:21081692-21081948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
234-397
               

               
Cow position:
               
chr18:7487426-7487255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
234-418
               

               
Cow position:
               
chr18:3709417-3709232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
234-449
               

               
Cow position:
               
chr18:48000639-48000860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
234-486
               

               
Cow position:
               
chr18:12273842-12273592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
235-479
               

               
Cow position:
               
chr18:10891698-10891457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
111, 63
               

               
Conread position:
               
236-404
               

               
Cow position:
               
chr18:41257733-41257904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
236-425
               

               
Cow position:
               
chr18:32290890-32290707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 49
               

               
Conread position:
               
236-435
               

               
Cow position:
               
chr18:42431905-42432101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
236-480
               

               
Cow position:
               
chr18:4495702-4495946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
236-480
               

               
Cow position:
               
chr18:23446880-23447121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
236-480
               

               
Cow position:
               
chr18:48713729-48713491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
24, 79
               

               
Conread position:
               
236-484
               

               
Cow position:
               
chr18:22120698-22120950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
237-369
               

               
Cow position:
               
chr18:37758810-37758938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
237-424
               

               
Cow position:
               
chr18:56463544-56463734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
237-446
               

               
Cow position:
               
chr18:7952395-7952178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 208
               

               
Conread position:
               
237-453
               

               
Cow position:
               
chr18:7945383-7945165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
237-477
               

               
Cow position:
               
chr18:44917936-44917700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
237-480
               

               
Cow position:
               
chr18:56181269-56181521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
237-483
               

               
Cow position:
               
chr18:1931269-1931517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
237-483
               

               
Cow position:
               
chr18:41024931-41025209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
238-381
               

               
Cow position:
               
chr18:18722257-18722115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
238-381
               

               
Cow position:
               
chr18:51398152-51398294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
238-396
               

               
Cow position:
               
chr18:15340305-15340470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
238-401
               

               
Cow position:
               
chr18:33364394-33364231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 76
               

               
Conread position:
               
238-427
               

               
Cow position:
               
chr18:16382043-16381851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
238-434
               

               
Cow position:
               
chr18:17195159-17195359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 88
               

               
Conread position:
               
238-434
               

               
Cow position:
               
chr18:21187481-21187292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
238-441
               

               
Cow position:
               
chr18:21751564-21751354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
238-462
               

               
Cow position:
               
chr18:23649109-23648880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
238-464
               

               
Cow position:
               
chr18:51405734-51405950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr18:23169764-23169520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr18:23623446-23623691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr18:53092827-53093072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr18:55505585-55505351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
238-478
               

               
Cow position:
               
chr18:30225346-30225588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
238-478
               

               
Cow position:
               
chr18:55693001-55692758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
238-480
               

               
Cow position:
               
chr18:14586296-14586530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
238-480
               

               
Cow position:
               
chr18:16379127-16378863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
238-480
               

               
Cow position:
               
chr18:18592648-18592413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
238-480
               

               
Cow position:
               
chr18:52402782-52403027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
238-483
               

               
Cow position:
               
chr18:19688211-19687961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
238-483
               

               
Cow position:
               
chr18:37189109-37189357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
238-483
               

               
Cow position:
               
chr18:50095227-50095461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
238-484
               

               
Cow position:
               
chr18:247513-247753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
238-484
               

               
Cow position:
               
chr18:5600823-5600572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
238-484
               

               
Cow position:
               
chr18:12775597-12775848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
238-484
               

               
Cow position:
               
chr18:19868076-19868322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
238-484
               

               
Cow position:
               
chr18:47417184-47416938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 150
               

               
Conread position:
               
238-485
               

               
Cow position:
               
chr18:51691278-51691527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
238-486
               

               
Cow position:
               
chr18:29372052-29371800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
238-486
               

               
Cow position:
               
chr18:44137677-44137429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 18
               

               
Conread position:
               
239-432
               

               
Cow position:
               
chr18:14871421-14871616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 156
               

               
Conread position:
               
239-446
               

               
Cow position:
               
chr18:39689972-39689761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
239-465
               

               
Cow position:
               
chr18:7414850-7415075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
239-466
               

               
Cow position:
               
chr18:45899077-45898846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
239-468
               

               
Cow position:
               
chr18:2793796-2794019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
239-469
               

               
Cow position:
               
chr18:50632262-50632491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
239-470
               

               
Cow position:
               
chr18:10322979-10322756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
239-470
               

               
Cow position:
               
chr18:25757129-25757361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
24, 167
               

               
Conread position:
               
239-471
               

               
Cow position:
               
chr18:39875059-39875309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 164
               

               
Conread position:
               
239-479
               

               
Cow position:
               
chr18:10977031-10977269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
239-480
               

               
Cow position:
               
chr18:3193890-3193646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
239-480
               

               
Cow position:
               
chr18:3212065-3211818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
239-480
               

               
Cow position:
               
chr18:44909237-44908993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 100
               

               
Conread position:
               
239-480
               

               
Cow position:
               
chr18:45558328-45558087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
239-484
               

               
Cow position:
               
chr18:31556974-31557224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
239-484
               

               
Cow position:
               
chr18:55000557-55000804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
239-485
               

               
Cow position:
               
chr18:9029796-9029545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
240-399
               

               
Cow position:
               
chr18:47680691-47680535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
240-399
               

               
Cow position:
               
chr18:47865248-47865092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
240-440
               

               
Cow position:
               
chr18:34490461-34490260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
240-441
               

               
Cow position:
               
chr18:49970465-49970674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
240-470
               

               
Cow position:
               
chr18:7963958-7963731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
240-478
               

               
Cow position:
               
chr18:46880526-46880763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
240-479
               

               
Cow position:
               
chr18:20462526-20462754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
149, 16
               

               
Conread position:
               
240-480
               

               
Cow position:
               
chr18:7109312-7109070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
240-480
               

               
Cow position:
               
chr18:12270694-12270442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 193
               

               
Conread position:
               
240-483
               

               
Cow position:
               
chr18:3209902-3209662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
240-483
               

               
Cow position:
               
chr18:38601701-38601948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
240-483
               

               
Cow position:
               
chr18:42431432-42431674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
47, 72
               

               
Conread position:
               
240-484
               

               
Cow position:
               
chr18:20641319-20641561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 74
               

               
Conread position:
               
241-398
               

               
Cow position:
               
chr18:16137097-16137259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
241-420
               

               
Cow position:
               
chr18:47096603-47096429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
241-441
               

               
Cow position:
               
chr18:49161116-49161324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 127
               

               
Conread position:
               
241-461
               

               
Cow position:
               
chr18:45573563-45573340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 205
               

               
Conread position:
               
241-479
               

               
Cow position:
               
chr18:23630434-23630663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
241-480
               

               
Cow position:
               
chr18:43796777-43797015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
241-480
               

               
Cow position:
               
chr18:52251672-52251917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
241-483
               

               
Cow position:
               
chr18:6881177-6881416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
241-483
               

               
Cow position:
               
chr18:46276120-46276364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
241-484
               

               
Cow position:
               
chr18:15613684-15613923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
242-424
               

               
Cow position:
               
chr18:52406240-52406060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
242-436
               

               
Cow position:
               
chr18:27637674-27637476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
18, 48
               

               
Conread position:
               
242-466
               

               
Cow position:
               
chr18:6470272-6470049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
242-470
               

               
Cow position:
               
chr18:5632446-5632218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
242-479
               

               
Cow position:
               
chr18:1571060-1571294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
242-480
               

               
Cow position:
               
chr18:42290156-42290387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
242-483
               

               
Cow position:
               
chr18:25598053-25598301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 95
               

               
Conread position:
               
242-485
               

               
Cow position:
               
chr18:10214007-10214255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
243-433
               

               
Cow position:
               
chr18:4530736-4530546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
243-480
               

               
Cow position:
               
chr18:3180590-3180350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
244-453
               

               
Cow position:
               
chr18:35786231-35786023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
244-466
               

               
Cow position:
               
chr18:19193193-19193411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
244-479
               

               
Cow position:
               
chr18:33896237-33896483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
244-480
               

               
Cow position:
               
chr18:49017665-49017445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
244-483
               

               
Cow position:
               
chr18:11578233-11578011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
244-484
               

               
Cow position:
               
chr18:37023358-37023615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
245-484
               

               
Cow position:
               
chr18:52414144-52413901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
246-381
               

               
Cow position:
               
chr18:641139-641274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
246-417
               

               
Cow position:
               
chr18:50263754-50263921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
166, 45
               

               
Conread position:
               
246-417
               

               
Cow position:
               
chr18:50276066-50276240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
246-419
               

               
Cow position:
               
chr18:36500905-36501077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
246-432
               

               
Cow position:
               
chr18:54572112-54572304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
246-439
               

               
Cow position:
               
chr18:39097396-39097595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
67, 137
               

               
Conread position:
               
246-446
               

               
Cow position:
               
chr18:49602866-49603069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
246-461
               

               
Cow position:
               
chr18:11672229-11672002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
65, 168
               

               
Conread position:
               
246-470
               

               
Cow position:
               
chr18:21195171-21195391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 31
               

               
Conread position:
               
246-472
               

               
Cow position:
               
chr18:11779826-11779601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
246-477
               

               
Cow position:
               
chr18:9010881-9010649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 72
               

               
Conread position:
               
246-477
               

               
Cow position:
               
chr18:55782258-55782489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
221, 31
               

               
Conread position:
               
246-478
               

               
Cow position:
               
chr18:44262799-44262573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
185, 68
               

               
Conread position:
               
246-479
               

               
Cow position:
               
chr18:8300184-8299960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
246-479
               

               
Cow position:
               
chr18:9558142-9557921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
246-479
               

               
Cow position:
               
chr18:55120043-55119813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
157, 44
               

               
Conread position:
               
246-480
               

               
Cow position:
               
chr18:8949623-8949855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
246-480
               

               
Cow position:
               
chr18:12117677-12117908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 94
               

               
Conread position:
               
246-480
               

               
Cow position:
               
chr18:22789914-22790145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
246-480
               

               
Cow position:
               
chr18:46452707-46452942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
174, 67
               

               
Conread position:
               
246-480
               

               
Cow position:
               
chr18:51757270-51757033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
67, 140
               

               
Conread position:
               
246-483
               

               
Cow position:
               
chr18:10905023-10904787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 86
               

               
Conread position:
               
246-483
               

               
Cow position:
               
chr18:50382427-50382190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 118
               

               
Conread position:
               
246-484
               

               
Cow position:
               
chr18:22180605-22180844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
184, 68
               

               
Conread position:
               
246-485
               

               
Cow position:
               
chr18:11691230-11691473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
67, 162
               

               
Conread position:
               
247-424
               

               
Cow position:
               
chr18:21528825-21528643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
247-425
               

               
Cow position:
               
chr18:9596352-9596178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
247-472
               

               
Cow position:
               
chr18:7963592-7963383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
247-478
               

               
Cow position:
               
chr18:14225563-14225333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 41
               

               
Conread position:
               
247-478
               

               
Cow position:
               
chr18:53039024-53038772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
247-479
               

               
Cow position:
               
chr18:4626615-4626844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
247-480
               

               
Cow position:
               
chr18:11857071-11856840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
223, 71
               

               
Conread position:
               
247-480
               

               
Cow position:
               
chr18:15517000-15517231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
247-480
               

               
Cow position:
               
chr18:29065217-29065442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
247-483
               

               
Cow position:
               
chr18:9974155-9974391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 90
               

               
Conread position:
               
247-483
               

               
Cow position:
               
chr18:41950388-41950146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
247-484
               

               
Cow position:
               
chr18:9040529-9040771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 231
               

               
Conread position:
               
247-485
               

               
Cow position:
               
chr18:33300059-33299839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
248-419
               

               
Cow position:
               
chr18:1549366-1549548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
248-423
               

               
Cow position:
               
chr18:42978458-42978648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
248-441
               

               
Cow position:
               
chr18:45186050-45185851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
248-446
               

               
Cow position:
               
chr18:34444563-34444759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 166
               

               
Conread position:
               
248-478
               

               
Cow position:
               
chr18:2773213-2773450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
248-478
               

               
Cow position:
               
chr18:2776716-2776953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
248-478
               

               
Cow position:
               
chr18:32883466-32883249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
248-479
               

               
Cow position:
               
chr18:4884344-4884576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
248-479
               

               
Cow position:
               
chr18:11791092-11790866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
248-479
               

               
Cow position:
               
chr18:47512169-47511947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
248-485
               

               
Cow position:
               
chr18:19765360-19765124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
249-375
               

               
Cow position:
               
chr18:35112134-35112260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
249-441
               

               
Cow position:
               
chr18:8208250-8208446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
249-444
               

               
Cow position:
               
chr18:50004533-50004726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
249-446
               

               
Cow position:
               
chr18:11434925-11434727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
249-453
               

               
Cow position:
               
chr18:43057066-43056866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
64, 113
               

               
Conread position:
               
249-470
               

               
Cow position:
               
chr18:29474911-29474694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
249-480
               

               
Cow position:
               
chr18:15173176-15172950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
249-480
               

               
Cow position:
               
chr18:24719482-24719253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
250-377
               

               
Cow position:
               
chr18:12026686-12026558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
64, 90
               

               
Conread position:
               
250-420
               

               
Cow position:
               
chr18:17974796-17974630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 88
               

               
Conread position:
               
250-474
               

               
Cow position:
               
chr18:9846247-9846464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
250-479
               

               
Cow position:
               
chr18:1954408-1954648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
250-480
               

               
Cow position:
               
chr18:1399180-1399410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 180
               

               
Conread position:
               
250-480
               

               
Cow position:
               
chr18:8170919-8171145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
250-480
               

               
Cow position:
               
chr18:22055688-22055934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
250-483
               

               
Cow position:
               
chr18:45104257-45104504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
251-433
               

               
Cow position:
               
chr18:19809512-19809695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 67
               

               
Conread position:
               
251-467
               

               
Cow position:
               
chr18:30359971-30360198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
251-477
               

               
Cow position:
               
chr18:32251994-32252225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
251-479
               

               
Cow position:
               
chr18:51383227-51383454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
251-483
               

               
Cow position:
               
chr18:11867509-11867274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 86
               

               
Conread position:
               
251-484
               

               
Cow position:
               
chr18:12023468-12023701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
251-485
               

               
Cow position:
               
chr18:12059165-12058938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
252-390
               

               
Cow position:
               
chr18:37804800-37804669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
252-407
               

               
Cow position:
               
chr18:11814469-11814316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
138, 66
               

               
Conread position:
               
252-424
               

               
Cow position:
               
chr18:49441013-49440837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr18:32243570-32243764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
252-457
               

               
Cow position:
               
chr18:48407902-48407702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
64, 37
               

               
Conread position:
               
252-466
               

               
Cow position:
               
chr18:54130172-54130377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
130, 46
               

               
Conread position:
               
252-476
               

               
Cow position:
               
chr18:30341012-30341236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr18:3417336-3417101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 161
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr18:31082173-31082408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr18:38937990-38937762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr18:47824604-47824828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 62
               

               
Conread position:
               
252-483
               

               
Cow position:
               
chr18:31711407-31711627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
252-484
               

               
Cow position:
               
chr18:9066870-9066634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 68
               

               
Conread position:
               
253-389
               

               
Cow position:
               
chr18:18520632-18520770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
253-445
               

               
Cow position:
               
chr18:4489732-4489933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
253-461
               

               
Cow position:
               
chr18:37187825-37188038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
253-466
               

               
Cow position:
               
chr18:46048923-46048706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
253-480
               

               
Cow position:
               
chr18:135491-135714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
253-484
               

               
Cow position:
               
chr18:37303323-37303082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
253-484
               

               
Cow position:
               
chr18:42479411-42479650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
256-389
               

               
Cow position:
               
chr18:30247839-30247973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
256-397
               

               
Cow position:
               
chr18:37690317-37690173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
256-411
               

               
Cow position:
               
chr18:17007318-17007471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
256-422
               

               
Cow position:
               
chr18:12143785-12143952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
256-422
               

               
Cow position:
               
chr18:55722666-55722499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
59, 84
               

               
Conread position:
               
256-424
               

               
Cow position:
               
chr18:47419958-47419795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
256-432
               

               
Cow position:
               
chr18:52387052-52387232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
256-434
               

               
Cow position:
               
chr18:5189525-5189707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
256-441
               

               
Cow position:
               
chr18:2108414-2108226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 101
               

               
Conread position:
               
256-441
               

               
Cow position:
               
chr18:31159106-31159294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
256-453
               

               
Cow position:
               
chr18:47801930-47802123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
256-454
               

               
Cow position:
               
chr18:41703000-41702803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 159
               

               
Conread position:
               
256-466
               

               
Cow position:
               
chr18:12113202-12113410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
256-470
               

               
Cow position:
               
chr18:18918797-18919008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
256-479
               

               
Cow position:
               
chr18:2146426-2146638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
256-479
               

               
Cow position:
               
chr18:4555998-4556225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
60, 154
               

               
Conread position:
               
256-479
               

               
Cow position:
               
chr18:32189351-32189566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
256-479
               

               
Cow position:
               
chr18:49981292-49981498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
256-479
               

               
Cow position:
               
chr18:53642583-53642807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
256-480
               

               
Cow position:
               
chr18:22568902-22569126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
256-480
               

               
Cow position:
               
chr18:29648946-29648724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
256-480
               

               
Cow position:
               
chr18:38985857-38985633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
181, 58
               

               
Conread position:
               
256-480
               

               
Cow position:
               
chr18:39623970-39623740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
256-480
               

               
Cow position:
               
chr18:45903730-45903954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
58, 160
               

               
Conread position:
               
256-480
               

               
Cow position:
               
chr18:49038620-49038402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
256-480
               

               
Cow position:
               
chr18:49100219-49100428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
256-480
               

               
Cow position:
               
chr18:50359491-50359271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
222, 58
               

               
Conread position:
               
256-483
               

               
Cow position:
               
chr18:9089857-9089637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
171, 44
               

               
Conread position:
               
256-483
               

               
Cow position:
               
chr18:12242443-12242214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
256-483
               

               
Cow position:
               
chr18:28930475-28930699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
66, 62
               

               
Conread position:
               
256-484
               

               
Cow position:
               
chr18:16659262-16659498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
256-484
               

               
Cow position:
               
chr18:38211325-38211096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 154
               

               
Conread position:
               
256-485
               

               
Cow position:
               
chr18:21782851-21782626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
256-485
               

               
Cow position:
               
chr18:23163060-23162828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 165
               

               
Conread position:
               
256-486
               

               
Cow position:
               
chr18:3132607-3132829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
220, 62
               

               
Conread position:
               
256-486
               

               
Cow position:
               
chr18:17390824-17391059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 154
               

               
Conread position:
               
257-366
               

               
Cow position:
               
chr18:1151782-1151892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
257-441
               

               
Cow position:
               
chr18:697054-697238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 131
               

               
Conread position:
               
257-469
               

               
Cow position:
               
chr18:42427781-42427571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
257-471
               

               
Cow position:
               
chr18:28657750-28657962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
257-480
               

               
Cow position:
               
chr18:5647973-5647753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
257-483
               

               
Cow position:
               
chr18:10576268-10576042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 80
               

               
Conread position:
               
257-483
               

               
Cow position:
               
chr18:15809646-15809863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
257-486
               

               
Cow position:
               
chr18:47547817-47548052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
257-496
               

               
Cow position:
               
chr18:52649174-52649422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 240
               

               
Conread position:
               
258-446
               

               
Cow position:
               
chr18:28322816-28322631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
258-476
               

               
Cow position:
               
chr18:35534986-35535202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
258-480
               

               
Cow position:
               
chr18:35367041-35367252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
258-480
               

               
Cow position:
               
chr18:47183149-47183353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
258-480
               

               
Cow position:
               
chr18:47693218-47693006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
168, 56
               

               
Conread position:
               
258-480
               

               
Cow position:
               
chr18:49015280-49015069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
258-480
               

               
Cow position:
               
chr18:51643205-51643425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
258-483
               

               
Cow position:
               
chr18:37002801-37002569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
259-426
               

               
Cow position:
               
chr18:21143805-21143970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
260-397
               

               
Cow position:
               
chr18:25139723-25139584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
54, 91
               

               
Conread position:
               
260-399
               

               
Cow position:
               
chr18:10757895-10758034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
260-399
               

               
Cow position:
               
chr18:16417335-16417474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
260-453
               

               
Cow position:
               
chr18:41724652-41724851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
260-466
               

               
Cow position:
               
chr18:39168692-39168486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 149
               

               
Conread position:
               
260-471
               

               
Cow position:
               
chr18:9366084-9365868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
260-478
               

               
Cow position:
               
chr18:51192586-51192798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
260-480
               

               
Cow position:
               
chr18:33159105-33158883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 185
               

               
Conread position:
               
260-480
               

               
Cow position:
               
chr18:48633939-48633726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 67
               

               
Conread position:
               
260-480
               

               
Cow position:
               
chr18:55499232-55499009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
261-417
               

               
Cow position:
               
chr18:39972687-39972534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
261-484
               

               
Cow position:
               
chr18:36450062-36449834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
262-441
               

               
Cow position:
               
chr18:3097865-3098053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
262-480
               

               
Cow position:
               
chr18:5578455-5578249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
262-480
               

               
Cow position:
               
chr18:24759500-24759716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
262-484
               

               
Cow position:
               
chr18:3085347-3085580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 219
               

               
Conread position:
               
262-485
               

               
Cow position:
               
chr18:30586076-30586286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
267-478
               

               
Cow position:
               
chr18:35874233-35874022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 51
               

               
Conread position:
               
269-483
               

               
Cow position:
               
chr18:24266250-24266470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
269-484
               

               
Cow position:
               
chr18:11184092-11183877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
270-397
               

               
Cow position:
               
chr18:44548594-44548723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
270-420
               

               
Cow position:
               
chr18:38228552-38228407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
270-429
               

               
Cow position:
               
chr18:306564-306728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
270-440
               

               
Cow position:
               
chr18:24022767-24022598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
270-478
               

               
Cow position:
               
chr18:22516384-22516592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
270-479
               

               
Cow position:
               
chr18:25006354-25006552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
270-480
               

               
Cow position:
               
chr18:40047352-40047558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
270-485
               

               
Cow position:
               
chr18:47486198-47485979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
270-498
               

               
Cow position:
               
chr18:36768664-36768888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
271-444
               

               
Cow position:
               
chr18:43125228-43125062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
272-484
               

               
Cow position:
               
chr18:49841433-49841218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
277-470
               

               
Cow position:
               
chr18:49655826-49655635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
277-474
               

               
Cow position:
               
chr18:29356488-29356678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 46
               

               
Conread position:
               
278-480
               

               
Cow position:
               
chr18:34834640-34834436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
282-446
               

               
Cow position:
               
chr18:54973872-54974033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
292-439
               

               
Cow position:
               
chr18:82101-81951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
300-488
               

               
Cow position:
               
chr18:52855171-52854987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
301-486
               

               
Cow position:
               
chr18:48962060-48961869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 186
               

               
Conread position:
               
317-484
               

               
Cow position:
               
chr18:47705336-47705172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
318-479
               

               
Cow position:
               
chr18:46135842-46135682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
319-470
               

               
Cow position:
               
chr18:2765351-2765203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
319-478
               

               
Cow position:
               
chr18:4797063-4796915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
319-478
               

               
Cow position:
               
chr18:16997355-16997196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
319-478
               

               
Cow position:
               
chr18:47828919-47828764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 13
               

               
Conread position:
               
319-480
               

               
Cow position:
               
chr18:9176996-9176843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
319-480
               

               
Cow position:
               
chr18:19896350-19896511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
319-483
               

               
Cow position:
               
chr18:36201529-36201687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
319-483
               

               
Cow position:
               
chr18:56184036-56183871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
319-484
               

               
Cow position:
               
chr18:19883634-19883467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
319-484
               

               
Cow position:
               
chr18:24342947-24342778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
319-485
               

               
Cow position:
               
chr18:28923748-28923912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
319-485
               

               
Cow position:
               
chr18:45637315-45637477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
319-486
               

               
Cow position:
               
chr18:49324335-49324500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
319-491
               

               
Cow position:
               
chr18:4534922-4535096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
320-479
               

               
Cow position:
               
chr18:25647147-25647307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
320-480
               

               
Cow position:
               
chr18:46727690-46727528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 44
               

               
Conread position:
               
321-479
               

               
Cow position:
               
chr18:36230628-36230781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
321-480
               

               
Cow position:
               
chr18:22214587-22214428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
322-483
               

               
Cow position:
               
chr18:11312838-11312998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
147, 78
               

               
Conread position:
               
325-466
               

               
Cow position:
               
chr18:36459024-36458888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
325-480
               

               
Cow position:
               
chr18:16686240-16686395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
325-480
               

               
Cow position:
               
chr18:38607316-38607167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
325-483
               

               
Cow position:
               
chr18:46072558-46072400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
327-485
               

               
Cow position:
               
chr18:38687173-38687017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
150, 98
               

               
Conread position:
               
329-437
               

               
Cow position:
               
chr18:49197510-49197402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-461
               

               
Cow position:
               
chr18:45985535-45985666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
330-480
               

               
Cow position:
               
chr18:23766318-23766470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
332-439
               

               
Cow position:
               
chr18:48452160-48452052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
333-484
               

               
Cow position:
               
chr18:44523174-44523024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
334-488
               

               
Cow position:
               
chr18:17660474-17660627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
336-477
               

               
Cow position:
               
chr18:50082173-50082314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
337-485
               

               
Cow position:
               
chr18:19620024-19619877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
338-484
               

               
Cow position:
               
chr18:21740733-21740881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
340-477
               

               
Cow position:
               
chr18:23505411-23505274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
342-479
               

               
Cow position:
               
chr18:11685060-11684923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
344-478
               

               
Cow position:
               
chr18:18369286-18369417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
344-478
               

               
Cow position:
               
chr18:45571088-45570956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
344-479
               

               
Cow position:
               
chr18:44801813-44801948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
358-483
               

               
Cow position:
               
chr18:44483711-44483836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.