Non-Coding RNA Search

Cow genome map


           Conread name:
           rcmu26_a6.y1
        

               Conread position:
               186-484
               

               Cow position:
               chr3:31804521-31804822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 131
               

               Conread position:
               214-487
               

               Cow position:
               chr3:29596610-29596332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               216-441
               

               Cow position:
               chr3:63860394-63860623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               216-480
               

               Cow position:
               chr3:59605059-59604795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 133
               

               Conread position:
               217-479
               

               Cow position:
               chr3:49363321-49363059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               11, 45
               

               Conread position:
               218-377
               

               Cow position:
               chr3:61190322-61190479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               104, 38
               

               Conread position:
               221-480
               

               Cow position:
               chr3:71703670-71703427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 61
               

               Conread position:
               224-441
               

               Cow position:
               chr3:83705331-83705549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               226-484
               

               Cow position:
               chr3:59299776-59299518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               226-485
               

               Cow position:
               chr3:80709662-80709924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               88, 53
               

               Conread position:
               227-441
               

               Cow position:
               chr3:986218-986002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               86, 29
               

               Conread position:
               227-479
               

               Cow position:
               chr3:17331922-17331680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               35, 8
               

               Conread position:
               228-408
               

               Cow position:
               chr3:58929330-58929514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               228-417
               

               Cow position:
               chr3:57642006-57641812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               85, 178
               

               Conread position:
               228-485
               

               Cow position:
               chr3:83454955-83455205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               88, 18
               

               Conread position:
               230-434
               

               Cow position:
               chr3:79893295-79893503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 156
               

               Conread position:
               230-467
               

               Cow position:
               chr3:83770935-83770693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               230-469
               

               Cow position:
               chr3:41863829-41863584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 94
               

               Conread position:
               230-480
               

               Cow position:
               chr3:22668614-22668359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               30, 145
               

               Conread position:
               230-483
               

               Cow position:
               chr3:30180282-30180031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               231, 26
               

               Conread position:
               230-484
               

               Cow position:
               chr3:76270090-76269834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               20, 85
               

               Conread position:
               231-420
               

               Cow position:
               chr3:32436837-32436647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               60, 5
               

               Conread position:
               231-423
               

               Cow position:
               chr3:22675906-22676104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               34, 132
               

               Conread position:
               231-426
               

               Cow position:
               chr3:34164086-34164281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 115
               

               Conread position:
               231-478
               

               Cow position:
               chr3:57704536-57704277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               22, 113
               

               Conread position:
               231-483
               

               Cow position:
               chr3:76922473-76922713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               62, 82
               

               Conread position:
               232-441
               

               Cow position:
               chr3:76056090-76056297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               232-478
               

               Cow position:
               chr3:29887239-29887470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               5, 52
               

               Conread position:
               232-480
               

               Cow position:
               chr3:74584389-74584157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               232-480
               

               Cow position:
               chr3:76156187-76155937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               21, 102
               

               Conread position:
               232-484
               

               Cow position:
               chr3:18067330-18067086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               232-487
               

               Cow position:
               chr3:46792580-46792328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               90, 24
               

               Conread position:
               233-469
               

               Cow position:
               chr3:44960143-44959902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               233-478
               

               Cow position:
               chr3:23203030-23203280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               11, 156
               

               Conread position:
               233-479
               

               Cow position:
               chr3:22165218-22165465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               233-479
               

               Cow position:
               chr3:62046869-62046614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               233-480
               

               Cow position:
               chr3:10591309-10591566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               17, 87
               

               Conread position:
               233-482
               

               Cow position:
               chr3:68587216-68586970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 23
               

               Conread position:
               234-434
               

               Cow position:
               chr3:26337818-26338025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               234-441
               

               Cow position:
               chr3:75777873-75778074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               177, 22
               

               Conread position:
               234-450
               

               Cow position:
               chr3:29813422-29813215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               113, 21
               

               Conread position:
               234-470
               

               Cow position:
               chr3:59828190-59828434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               234-477
               

               Cow position:
               chr3:18687097-18686858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               234-483
               

               Cow position:
               chr3:3985515-3985273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 78
               

               Conread position:
               235-470
               

               Cow position:
               chr3:14601519-14601752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               235-479
               

               Cow position:
               chr3:23168872-23169113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               81, 52
               

               Conread position:
               235-479
               

               Cow position:
               chr3:27274723-27274481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 167
               

               Conread position:
               235-480
               

               Cow position:
               chr3:65237219-65236973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               235-484
               

               Cow position:
               chr3:48810439-48810700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               235-485
               

               Cow position:
               chr3:30941001-30940746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               235-485
               

               Cow position:
               chr3:39873510-39873751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               235-489
               

               Cow position:
               chr3:34871762-34871507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               78, 21
               

               Conread position:
               236-397
               

               Cow position:
               chr3:77665361-77665520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               236-427
               

               Cow position:
               chr3:28323404-28323219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               236-435
               

               Cow position:
               chr3:70333035-70333227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               103, 20
               

               Conread position:
               236-472
               

               Cow position:
               chr3:9641747-9641524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               170, 20
               

               Conread position:
               236-476
               

               Cow position:
               chr3:15159222-15158984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               236-478
               

               Cow position:
               chr3:7581523-7581766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 81
               

               Conread position:
               236-478
               

               Cow position:
               chr3:14770692-14770931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               236-479
               

               Cow position:
               chr3:74754511-74754276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 79
               

               Conread position:
               236-480
               

               Cow position:
               chr3:39661257-39661508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               9, 191
               

               Conread position:
               236-480
               

               Cow position:
               chr3:64197019-64196775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               236-484
               

               Cow position:
               chr3:53384086-53384334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               236-485
               

               Cow position:
               chr3:2025400-2025140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               236-485
               

               Cow position:
               chr3:39247832-39248080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               237-434
               

               Cow position:
               chr3:19044572-19044771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 153
               

               Conread position:
               237-478
               

               Cow position:
               chr3:78092317-78092560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 139
               

               Conread position:
               237-479
               

               Cow position:
               chr3:31349916-31350154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               237-484
               

               Cow position:
               chr3:1517320-1517567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               99, 24
               

               Conread position:
               237-484
               

               Cow position:
               chr3:2648314-2648565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               238-395
               

               Cow position:
               chr3:42933674-42933512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               238-418
               

               Cow position:
               chr3:14211791-14211972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 98
               

               Conread position:
               238-421
               

               Cow position:
               chr3:77654113-77653935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               238-423
               

               Cow position:
               chr3:79398336-79398148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-424
               

               Cow position:
               chr3:18699917-18700106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-424
               

               Cow position:
               chr3:37851687-37851501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-427
               

               Cow position:
               chr3:32377004-32376815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               238-431
               

               Cow position:
               chr3:66884834-66885029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               15, 85
               

               Conread position:
               238-439
               

               Cow position:
               chr3:44782534-44782330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 88
               

               Conread position:
               238-441
               

               Cow position:
               chr3:7381640-7381841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               238-441
               

               Cow position:
               chr3:23640531-23640331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               238-444
               

               Cow position:
               chr3:3401733-3401533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               238-445
               

               Cow position:
               chr3:73589572-73589787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               238-463
               

               Cow position:
               chr3:22924187-22924409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               238-466
               

               Cow position:
               chr3:84137619-84137852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               238-467
               

               Cow position:
               chr3:26982242-26982020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               76, 45
               

               Conread position:
               238-470
               

               Cow position:
               chr3:45667150-45667387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               76, 126
               

               Conread position:
               238-471
               

               Cow position:
               chr3:13301657-13301892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               76, 28
               

               Conread position:
               238-474
               

               Cow position:
               chr3:35624352-35624589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               238-477
               

               Cow position:
               chr3:75107966-75107726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               238-478
               

               Cow position:
               chr3:15953890-15954134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-478
               

               Cow position:
               chr3:79824727-79824969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-479
               

               Cow position:
               chr3:12705355-12705593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               238-479
               

               Cow position:
               chr3:47753433-47753176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               238-479
               

               Cow position:
               chr3:53428728-53428965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               85, 20
               

               Conread position:
               238-479
               

               Cow position:
               chr3:80565154-80564917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               56, 18
               

               Conread position:
               238-480
               

               Cow position:
               chr3:36375346-36375587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-480
               

               Cow position:
               chr3:40212840-40213084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               238-480
               

               Cow position:
               chr3:79271518-79271763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-483
               

               Cow position:
               chr3:22232475-22232704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               238-483
               

               Cow position:
               chr3:32787653-32787406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               238-483
               

               Cow position:
               chr3:48468368-48468119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-483
               

               Cow position:
               chr3:56678154-56678405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 41
               

               Conread position:
               238-483
               

               Cow position:
               chr3:56948901-56949142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               238-483
               

               Cow position:
               chr3:73237376-73237142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               238-484
               

               Cow position:
               chr3:4319912-4319656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               238-484
               

               Cow position:
               chr3:5040111-5040362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               238-484
               

               Cow position:
               chr3:26992765-26992515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               238-484
               

               Cow position:
               chr3:45211497-45211246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               238-484
               

               Cow position:
               chr3:55712626-55712384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               34, 78
               

               Conread position:
               238-484
               

               Cow position:
               chr3:58134491-58134741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 112
               

               Conread position:
               238-484
               

               Cow position:
               chr3:83889441-83889193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               238-485
               

               Cow position:
               chr3:51608989-51609240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               26, 115
               

               Conread position:
               238-485
               

               Cow position:
               chr3:79272380-79272629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               238-486
               

               Cow position:
               chr3:50768873-50768621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               17, 106
               

               Conread position:
               238-487
               

               Cow position:
               chr3:1830383-1830629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 40
               

               Conread position:
               238-488
               

               Cow position:
               chr3:27082848-27083108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 129
               

               Conread position:
               238-497
               

               Cow position:
               chr3:3556741-3556476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               239-423
               

               Cow position:
               chr3:68094344-68094150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               239-424
               

               Cow position:
               chr3:21959857-21959664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               239-433
               

               Cow position:
               chr3:84807136-84807332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               239-441
               

               Cow position:
               chr3:45314544-45314332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               239-446
               

               Cow position:
               chr3:26977729-26977517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               239-451
               

               Cow position:
               chr3:31115088-31115292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               239-466
               

               Cow position:
               chr3:11229178-11229402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               239-469
               

               Cow position:
               chr3:6728130-6728370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               239-477
               

               Cow position:
               chr3:44960827-44961052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               239-478
               

               Cow position:
               chr3:83491272-83491037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               239-480
               

               Cow position:
               chr3:53271029-53270779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               239-480
               

               Cow position:
               chr3:68156918-68156671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               239-483
               

               Cow position:
               chr3:54946313-54946077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               239-484
               

               Cow position:
               chr3:24596242-24596476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 17
               

               Conread position:
               239-485
               

               Cow position:
               chr3:7337597-7337838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               239-485
               

               Cow position:
               chr3:27976330-27976580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               240-380
               

               Cow position:
               chr3:55972892-55973029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               240-439
               

               Cow position:
               chr3:81616258-81616463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               240-441
               

               Cow position:
               chr3:76168436-76168644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               240-469
               

               Cow position:
               chr3:14194000-14194217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               240-469
               

               Cow position:
               chr3:48253069-48252845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               240-477
               

               Cow position:
               chr3:71238340-71238106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               240-479
               

               Cow position:
               chr3:20841687-20841923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               240-479
               

               Cow position:
               chr3:69785428-69785675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               240-479
               

               Cow position:
               chr3:73335470-73335234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 48
               

               Conread position:
               240-481
               

               Cow position:
               chr3:9662978-9663224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               74, 220
               

               Conread position:
               240-483
               

               Cow position:
               chr3:15051762-15052002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               240-483
               

               Cow position:
               chr3:69650708-69650943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               240-483
               

               Cow position:
               chr3:71496935-71497192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               240-484
               

               Cow position:
               chr3:210511-210264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               240-484
               

               Cow position:
               chr3:15153881-15153635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               240-486
               

               Cow position:
               chr3:49482524-49482774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               74, 16
               

               Conread position:
               241-408
               

               Cow position:
               chr3:60371174-60371003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 57
               

               Conread position:
               241-432
               

               Cow position:
               chr3:23037318-23037512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               71, 65
               

               Conread position:
               241-436
               

               Cow position:
               chr3:11027467-11027267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               241-442
               

               Cow position:
               chr3:43388934-43389141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               241-464
               

               Cow position:
               chr3:67519986-67520204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               117, 72
               

               Conread position:
               241-466
               

               Cow position:
               chr3:58317752-58317985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               241-470
               

               Cow position:
               chr3:58527568-58527347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 74
               

               Conread position:
               241-474
               

               Cow position:
               chr3:8813914-8814158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               72, 28
               

               Conread position:
               241-479
               

               Cow position:
               chr3:16752064-16752308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               73, 181
               

               Conread position:
               241-480
               

               Cow position:
               chr3:17936657-17936890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               116, 76
               

               Conread position:
               241-480
               

               Cow position:
               chr3:21014765-21015009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               241-480
               

               Cow position:
               chr3:39969674-39969914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               241-483
               

               Cow position:
               chr3:3947226-3946984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               71, 42
               

               Conread position:
               241-483
               

               Cow position:
               chr3:51403087-51402856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 79
               

               Conread position:
               241-483
               

               Cow position:
               chr3:59945317-59945070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               241-484
               

               Cow position:
               chr3:3656704-3656459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               241-484
               

               Cow position:
               chr3:54551520-54551767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 163
               

               Conread position:
               241-484
               

               Cow position:
               chr3:55318710-55318955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 15
               

               Conread position:
               241-485
               

               Cow position:
               chr3:21866848-21867094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               241-485
               

               Cow position:
               chr3:53738992-53739241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               241-485
               

               Cow position:
               chr3:71231587-71231341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               241-486
               

               Cow position:
               chr3:75080942-75080706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               241-486
               

               Cow position:
               chr3:80733660-80733910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               241-488
               

               Cow position:
               chr3:8540693-8540462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               242-417
               

               Cow position:
               chr3:3262633-3262822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               242-441
               

               Cow position:
               chr3:41366511-41366722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               242-475
               

               Cow position:
               chr3:48072697-48072928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               80, 49
               

               Conread position:
               242-477
               

               Cow position:
               chr3:4549209-4548979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               11, 51
               

               Conread position:
               242-479
               

               Cow position:
               chr3:48363258-48363026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               242-486
               

               Cow position:
               chr3:13380087-13380332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               243-444
               

               Cow position:
               chr3:27246779-27246974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               243-454
               

               Cow position:
               chr3:25290029-25289819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               71, 26
               

               Conread position:
               243-466
               

               Cow position:
               chr3:73467814-73467594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               122, 44
               

               Conread position:
               243-479
               

               Cow position:
               chr3:68707834-68708058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               243-479
               

               Cow position:
               chr3:68880943-68881166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               243-485
               

               Cow position:
               chr3:54373669-54373916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               71, 125
               

               Conread position:
               244-409
               

               Cow position:
               chr3:24922930-24922767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 75
               

               Conread position:
               244-477
               

               Cow position:
               chr3:2675219-2674981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               244-485
               

               Cow position:
               chr3:68004520-68004758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               70, 43
               

               Conread position:
               245-434
               

               Cow position:
               chr3:62186344-62186146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               245-440
               

               Cow position:
               chr3:44207690-44207889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               245-445
               

               Cow position:
               chr3:50350792-50350985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               161, 69
               

               Conread position:
               245-480
               

               Cow position:
               chr3:54435154-54434926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               245-483
               

               Cow position:
               chr3:22221512-22221274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               77, 73
               

               Conread position:
               245-485
               

               Cow position:
               chr3:4050367-4050140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               245-487
               

               Cow position:
               chr3:82629496-82629258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 43
               

               Conread position:
               246-399
               

               Cow position:
               chr3:75908096-75907941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 85
               

               Conread position:
               246-434
               

               Cow position:
               chr3:17531551-17531743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-434
               

               Cow position:
               chr3:80958324-80958516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               68, 162
               

               Conread position:
               246-437
               

               Cow position:
               chr3:56943745-56943934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               246-441
               

               Cow position:
               chr3:25037818-25038004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 42
               

               Conread position:
               246-441
               

               Cow position:
               chr3:75050438-75050629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               246-443
               

               Cow position:
               chr3:78071607-78071805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 85
               

               Conread position:
               246-446
               

               Cow position:
               chr3:73421298-73421510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               246-466
               

               Cow position:
               chr3:57764398-57764185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               51, 68
               

               Conread position:
               246-477
               

               Cow position:
               chr3:26970996-26970766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               246-478
               

               Cow position:
               chr3:1011677-1011437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 121
               

               Conread position:
               246-479
               

               Cow position:
               chr3:23105179-23105412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               246-479
               

               Cow position:
               chr3:78077375-78077135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               68, 97
               

               Conread position:
               246-480
               

               Cow position:
               chr3:14553058-14552824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               246-480
               

               Cow position:
               chr3:65969359-65969116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-483
               

               Cow position:
               chr3:36160013-36160247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               17, 58
               

               Conread position:
               246-483
               

               Cow position:
               chr3:54781808-54782062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               67, 127
               

               Conread position:
               246-483
               

               Cow position:
               chr3:71423384-71423605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               246-485
               

               Cow position:
               chr3:72342433-72342189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               246-486
               

               Cow position:
               chr3:55177565-55177805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               247-394
               

               Cow position:
               chr3:53249669-53249523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 89
               

               Conread position:
               247-423
               

               Cow position:
               chr3:4518000-4518177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               247-434
               

               Cow position:
               chr3:55730281-55730474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               247-446
               

               Cow position:
               chr3:73701682-73701487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               160, 25
               

               Conread position:
               247-461
               

               Cow position:
               chr3:5703361-5703146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 142
               

               Conread position:
               247-470
               

               Cow position:
               chr3:15973754-15973525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               247-478
               

               Cow position:
               chr3:59474304-59474073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               92, 71
               

               Conread position:
               247-478
               

               Cow position:
               chr3:59610535-59610767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               67, 84
               

               Conread position:
               247-482
               

               Cow position:
               chr3:48900146-48900385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               67, 182
               

               Conread position:
               247-484
               

               Cow position:
               chr3:75173416-75173635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               247-484
               

               Cow position:
               chr3:81234572-81234333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               75, 71
               

               Conread position:
               248-378
               

               Cow position:
               chr3:77650765-77650634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               65, 90
               

               Conread position:
               248-396
               

               Cow position:
               chr3:27212501-27212354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               248-398
               

               Cow position:
               chr3:15689172-15689311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               248-408
               

               Cow position:
               chr3:29807916-29807762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               248-418
               

               Cow position:
               chr3:40957945-40958116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               59, 89
               

               Conread position:
               248-433
               

               Cow position:
               chr3:59597356-59597174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               248-466
               

               Cow position:
               chr3:59933563-59933334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               66, 130
               

               Conread position:
               248-470
               

               Cow position:
               chr3:54100530-54100767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               248-478
               

               Cow position:
               chr3:8349388-8349614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               183, 27
               

               Conread position:
               248-479
               

               Cow position:
               chr3:83215452-83215212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               248-480
               

               Cow position:
               chr3:5305986-5305747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               248-480
               

               Cow position:
               chr3:80740736-80740516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               248-483
               

               Cow position:
               chr3:53592503-53592742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 127
               

               Conread position:
               248-483
               

               Cow position:
               chr3:75480181-75479949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               81, 70
               

               Conread position:
               248-484
               

               Cow position:
               chr3:67929076-67929315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 125
               

               Conread position:
               248-485
               

               Cow position:
               chr3:45882082-45881838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               248-486
               

               Cow position:
               chr3:64280755-64280987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               187, 65
               

               Conread position:
               248-491
               

               Cow position:
               chr3:10372439-10372208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               200, 35
               

               Conread position:
               249-420
               

               Cow position:
               chr3:22903576-22903744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               249-441
               

               Cow position:
               chr3:47198944-47199139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               64, 36
               

               Conread position:
               249-441
               

               Cow position:
               chr3:59947850-59947653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               64, 117
               

               Conread position:
               249-460
               

               Cow position:
               chr3:67744459-67744659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               249-480
               

               Cow position:
               chr3:3883638-3883866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               64, 89
               

               Conread position:
               249-480
               

               Cow position:
               chr3:17235021-17235264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               249-480
               

               Cow position:
               chr3:18426518-18426758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               68, 89
               

               Conread position:
               249-480
               

               Cow position:
               chr3:26904281-26904059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               141, 64
               

               Conread position:
               249-484
               

               Cow position:
               chr3:13353546-13353309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               64, 70
               

               Conread position:
               250-441
               

               Cow position:
               chr3:75966601-75966793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 86
               

               Conread position:
               250-477
               

               Cow position:
               chr3:36418306-36418528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               64, 69
               

               Conread position:
               250-483
               

               Cow position:
               chr3:3316627-3316869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 110
               

               Conread position:
               250-483
               

               Cow position:
               chr3:7662035-7661802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               250-483
               

               Cow position:
               chr3:57274240-57274007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               16, 49
               

               Conread position:
               250-484
               

               Cow position:
               chr3:77365111-77365346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               251-418
               

               Cow position:
               chr3:68624399-68624228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               251-439
               

               Cow position:
               chr3:59681727-59681914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               251-479
               

               Cow position:
               chr3:44932692-44932466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               63, 89
               

               Conread position:
               251-480
               

               Cow position:
               chr3:8061302-8061078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               11, 42
               

               Conread position:
               251-480
               

               Cow position:
               chr3:30357689-30357470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               79, 61
               

               Conread position:
               251-480
               

               Cow position:
               chr3:83474934-83474693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               251-483
               

               Cow position:
               chr3:1037208-1036968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               251-483
               

               Cow position:
               chr3:5365845-5365623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               251-483
               

               Cow position:
               chr3:31361604-31361366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               10, 89
               

               Conread position:
               251-483
               

               Cow position:
               chr3:60389933-60389711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               251-483
               

               Cow position:
               chr3:82019662-82019893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               251-485
               

               Cow position:
               chr3:79093881-79094097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               252-391
               

               Cow position:
               chr3:39967317-39967451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               252-411
               

               Cow position:
               chr3:8522975-8523136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 121
               

               Conread position:
               252-422
               

               Cow position:
               chr3:19641244-19641066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 172
               

               Conread position:
               252-424
               

               Cow position:
               chr3:24774821-24774658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               62, 36
               

               Conread position:
               252-425
               

               Cow position:
               chr3:74050527-74050698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               70, 66
               

               Conread position:
               252-437
               

               Cow position:
               chr3:23818666-23818483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               252-441
               

               Cow position:
               chr3:2506297-2506490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 142
               

               Conread position:
               252-457
               

               Cow position:
               chr3:67407188-67407394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               62, 88
               

               Conread position:
               252-470
               

               Cow position:
               chr3:52457088-52456877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               252-470
               

               Cow position:
               chr3:74644739-74644516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               252-470
               

               Cow position:
               chr3:76267794-76268016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               252-478
               

               Cow position:
               chr3:74234360-74234141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               252-483
               

               Cow position:
               chr3:11063541-11063319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               252-483
               

               Cow position:
               chr3:65413087-65413332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               252-484
               

               Cow position:
               chr3:6182054-6182276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               72, 14
               

               Conread position:
               252-484
               

               Cow position:
               chr3:49328113-49327890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               252-484
               

               Cow position:
               chr3:63845119-63844876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 116
               

               Conread position:
               252-486
               

               Cow position:
               chr3:60264543-60264773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               253-396
               

               Cow position:
               chr3:24370569-24370434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               253-423
               

               Cow position:
               chr3:68565990-68565827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 24
               

               Conread position:
               253-426
               

               Cow position:
               chr3:43895885-43896057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               253-437
               

               Cow position:
               chr3:22868538-22868728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               253-440
               

               Cow position:
               chr3:41510756-41510565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               253-470
               

               Cow position:
               chr3:54905784-54905577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               253-470
               

               Cow position:
               chr3:82366307-82366088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               59, 165
               

               Conread position:
               253-475
               

               Cow position:
               chr3:70761945-70762165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               61, 83
               

               Conread position:
               253-479
               

               Cow position:
               chr3:19682884-19682645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               253-480
               

               Cow position:
               chr3:54506884-54506656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 62
               

               Conread position:
               254-484
               

               Cow position:
               chr3:65019674-65019921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 86
               

               Conread position:
               255-476
               

               Cow position:
               chr3:53222188-53221965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 64
               

               Conread position:
               255-482
               

               Cow position:
               chr3:53083809-53084041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               59, 13
               

               Conread position:
               256-366
               

               Cow position:
               chr3:3887464-3887577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-394
               

               Cow position:
               chr3:22078253-22078110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-410
               

               Cow position:
               chr3:2637120-2636968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               58, 41
               

               Conread position:
               256-415
               

               Cow position:
               chr3:59635478-59635326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               256-420
               

               Cow position:
               chr3:77098649-77098814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               66, 62
               

               Conread position:
               256-423
               

               Cow position:
               chr3:3453757-3453585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-423
               

               Cow position:
               chr3:19611178-19611346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               256-427
               

               Cow position:
               chr3:562614-562792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               256-428
               

               Cow position:
               chr3:82424906-82425075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 11
               

               Conread position:
               256-429
               

               Cow position:
               chr3:18471478-18471301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-432
               

               Cow position:
               chr3:26393124-26393304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               58, 66
               

               Conread position:
               256-434
               

               Cow position:
               chr3:37641501-37641320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               256-437
               

               Cow position:
               chr3:621616-621426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 168
               

               Conread position:
               256-437
               

               Cow position:
               chr3:19709280-19709102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-438
               

               Cow position:
               chr3:29234503-29234691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 28
               

               Conread position:
               256-441
               

               Cow position:
               chr3:61023846-61024035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 8
               

               Conread position:
               256-441
               

               Cow position:
               chr3:70402813-70402632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               256-445
               

               Cow position:
               chr3:83672030-83671839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               57, 109
               

               Conread position:
               256-470
               

               Cow position:
               chr3:18393225-18393435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               256-470
               

               Cow position:
               chr3:68303493-68303275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 193
               

               Conread position:
               256-479
               

               Cow position:
               chr3:9121017-9120795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               256-479
               

               Cow position:
               chr3:11281944-11281716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-479
               

               Cow position:
               chr3:19586039-19585814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 162
               

               Conread position:
               256-479
               

               Cow position:
               chr3:29827992-29828198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               131, 57
               

               Conread position:
               256-479
               

               Cow position:
               chr3:52651905-52652131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               57, 87
               

               Conread position:
               256-479
               

               Cow position:
               chr3:56476849-56476632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               256-479
               

               Cow position:
               chr3:70609800-70609582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               58, 47
               

               Conread position:
               256-479
               

               Cow position:
               chr3:80072318-80072079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               256-480
               

               Cow position:
               chr3:23131993-23132220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-480
               

               Cow position:
               chr3:23408189-23408407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               256-480
               

               Cow position:
               chr3:33252717-33252940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               256-480
               

               Cow position:
               chr3:37041591-37041369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               256-480
               

               Cow position:
               chr3:71474232-71474455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               75, 62
               

               Conread position:
               256-482
               

               Cow position:
               chr3:67929995-67930235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               58, 157
               

               Conread position:
               256-483
               

               Cow position:
               chr3:8393514-8393296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               256-483
               

               Cow position:
               chr3:23920251-23920483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-483
               

               Cow position:
               chr3:32585328-32585096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               42, 70
               

               Conread position:
               256-483
               

               Cow position:
               chr3:33002560-33002339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               125, 67
               

               Conread position:
               256-483
               

               Cow position:
               chr3:53790367-53790589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               110, 43
               

               Conread position:
               256-483
               

               Cow position:
               chr3:61224574-61224798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               256-483
               

               Cow position:
               chr3:84174479-84174247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-484
               

               Cow position:
               chr3:2638108-2637871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-484
               

               Cow position:
               chr3:7330963-7331178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               256-484
               

               Cow position:
               chr3:15443551-15443782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               57, 185
               

               Conread position:
               256-484
               

               Cow position:
               chr3:55189575-55189809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-485
               

               Cow position:
               chr3:15228666-15228879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               256-485
               

               Cow position:
               chr3:15950742-15950969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               256-485
               

               Cow position:
               chr3:31309179-31309410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               55, 31
               

               Conread position:
               256-485
               

               Cow position:
               chr3:35075047-35074825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-485
               

               Cow position:
               chr3:73395290-73395058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 187
               

               Conread position:
               256-489
               

               Cow position:
               chr3:28908041-28908262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               256-491
               

               Cow position:
               chr3:49344867-49344630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               256-497
               

               Cow position:
               chr3:52845730-52845493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               257-423
               

               Cow position:
               chr3:5737918-5737757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               257-464
               

               Cow position:
               chr3:15160691-15160485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               257-470
               

               Cow position:
               chr3:16333979-16333756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               257-483
               

               Cow position:
               chr3:67626183-67626397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               149, 52
               

               Conread position:
               257-485
               

               Cow position:
               chr3:39996720-39996947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               162, 9
               

               Conread position:
               258-480
               

               Cow position:
               chr3:10958071-10958291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               258-483
               

               Cow position:
               chr3:68616162-68616377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               258-483
               

               Cow position:
               chr3:78093220-78093443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               258-485
               

               Cow position:
               chr3:77582279-77582053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 85
               

               Conread position:
               259-460
               

               Cow position:
               chr3:20021440-20021238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               259-463
               

               Cow position:
               chr3:46559544-46559749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               260-464
               

               Cow position:
               chr3:17058376-17058581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               260-470
               

               Cow position:
               chr3:3889406-3889608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               187, 53
               

               Conread position:
               260-477
               

               Cow position:
               chr3:60597708-60597496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               98, 54
               

               Conread position:
               260-478
               

               Cow position:
               chr3:53150504-53150276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               53, 69
               

               Conread position:
               260-480
               

               Cow position:
               chr3:14547170-14546951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               53, 63
               

               Conread position:
               260-480
               

               Cow position:
               chr3:74533505-74533298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               260-483
               

               Cow position:
               chr3:70896210-70895991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               260-483
               

               Cow position:
               chr3:75608659-75608446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               261-480
               

               Cow position:
               chr3:10668709-10668930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               53, 72
               

               Conread position:
               261-483
               

               Cow position:
               chr3:18001356-18001144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               262-465
               

               Cow position:
               chr3:75238630-75238421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               263-443
               

               Cow position:
               chr3:51233936-51234111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               173, 51
               

               Conread position:
               264-470
               

               Cow position:
               chr3:56704143-56704362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               264-480
               

               Cow position:
               chr3:17221966-17222193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               264-485
               

               Cow position:
               chr3:38864285-38864068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               139, 49
               

               Conread position:
               265-439
               

               Cow position:
               chr3:62370223-62370045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 143
               

               Conread position:
               268-478
               

               Cow position:
               chr3:70334529-70334744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               269-479
               

               Cow position:
               chr3:18607825-18607620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               270-417
               

               Cow position:
               chr3:10115456-10115310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 62
               

               Conread position:
               270-437
               

               Cow position:
               chr3:83199674-83199503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               270-466
               

               Cow position:
               chr3:7566260-7566454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               270-476
               

               Cow position:
               chr3:26603385-26603602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               270-478
               

               Cow position:
               chr3:9117195-9116978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               34, 164
               

               Conread position:
               270-478
               

               Cow position:
               chr3:66900566-66900782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               270-480
               

               Cow position:
               chr3:53046497-53046710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               44, 162
               

               Conread position:
               270-483
               

               Cow position:
               chr3:45647827-45647626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               270-483
               

               Cow position:
               chr3:79196924-79196705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               271-484
               

               Cow position:
               chr3:11987488-11987274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               42, 65
               

               Conread position:
               271-485
               

               Cow position:
               chr3:74079478-74079692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               271-487
               

               Cow position:
               chr3:39988092-39988294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               200, 42
               

               Conread position:
               272-483
               

               Cow position:
               chr3:68627528-68627738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 140
               

               Conread position:
               273-483
               

               Cow position:
               chr3:74601270-74601060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               274-484
               

               Cow position:
               chr3:84250392-84250598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               169, 44
               

               Conread position:
               276-483
               

               Cow position:
               chr3:52608336-52608128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               38, 64
               

               Conread position:
               277-460
               

               Cow position:
               chr3:35239165-35238982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               45, 98
               

               Conread position:
               279-469
               

               Cow position:
               chr3:82123401-82123588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               176, 16
               

               Conread position:
               283-483
               

               Cow position:
               chr3:74134855-74134647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               285-454
               

               Cow position:
               chr3:19788685-19788855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               286-478
               

               Cow position:
               chr3:16505339-16505524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               296-478
               

               Cow position:
               chr3:70565599-70565787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               18, 174
               

               Conread position:
               301-479
               

               Cow position:
               chr3:19626377-19626556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               303-479
               

               Cow position:
               chr3:73709175-73708997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               303-482
               

               Cow position:
               chr3:20515695-20515871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               310-480
               

               Cow position:
               chr3:54290397-54290564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               312-483
               

               Cow position:
               chr3:73461082-73460913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               317-485
               

               Cow position:
               chr3:20677730-20677897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               159, 96
               

               Conread position:
               319-434
               

               Cow position:
               chr3:81547214-81547098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 48
               

               Conread position:
               319-441
               

               Cow position:
               chr3:20175158-20175036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               319-476
               

               Cow position:
               chr3:74243104-74242949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               319-480
               

               Cow position:
               chr3:7428106-7427951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               319-480
               

               Cow position:
               chr3:20334119-20333956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               319-483
               

               Cow position:
               chr3:15173191-15173026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               319-483
               

               Cow position:
               chr3:73442986-73443142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               320-447
               

               Cow position:
               chr3:28556052-28556180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               320-470
               

               Cow position:
               chr3:28258206-28258054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 54
               

               Conread position:
               320-477
               

               Cow position:
               chr3:22716185-22716346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               320-479
               

               Cow position:
               chr3:12711806-12711965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-479
               

               Cow position:
               chr3:17934830-17934988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               320-479
               

               Cow position:
               chr3:32409322-32409162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               320-479
               

               Cow position:
               chr3:56059918-56059761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               320-479
               

               Cow position:
               chr3:74801959-74802116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               320-480
               

               Cow position:
               chr3:10104149-10103990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               320-480
               

               Cow position:
               chr3:26874700-26874545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               320-482
               

               Cow position:
               chr3:44330326-44330489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               18, 153
               

               Conread position:
               320-483
               

               Cow position:
               chr3:4481051-4480889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               320-483
               

               Cow position:
               chr3:55984207-55984045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               320-483
               

               Cow position:
               chr3:70899999-70899839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               320-483
               

               Cow position:
               chr3:74900534-74900694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               320-486
               

               Cow position:
               chr3:17447506-17447668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               320-486
               

               Cow position:
               chr3:53508720-53508555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               322-476
               

               Cow position:
               chr3:38100248-38100094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               323-483
               

               Cow position:
               chr3:67704652-67704492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               324-450
               

               Cow position:
               chr3:76415799-76415924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               324-475
               

               Cow position:
               chr3:59920132-59919986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               324-478
               

               Cow position:
               chr3:1785139-1785294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               324-480
               

               Cow position:
               chr3:45534194-45534344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               324-485
               

               Cow position:
               chr3:36914160-36913994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               325-438
               

               Cow position:
               chr3:27670515-27670405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               325-483
               

               Cow position:
               chr3:55835716-55835875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               325-483
               

               Cow position:
               chr3:63177586-63177429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               325-483
               

               Cow position:
               chr3:80053440-80053595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               326-480
               

               Cow position:
               chr3:21997685-21997839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               326-480
               

               Cow position:
               chr3:60265151-60265302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               327-469
               

               Cow position:
               chr3:53703862-53704003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               328-480
               

               Cow position:
               chr3:58767364-58767212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               329-472
               

               Cow position:
               chr3:64648592-64648449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               329-485
               

               Cow position:
               chr3:116290-116129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               330-461
               

               Cow position:
               chr3:24372020-24371890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               330-479
               

               Cow position:
               chr3:33693918-33693766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               330-483
               

               Cow position:
               chr3:13507567-13507414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               331-480
               

               Cow position:
               chr3:55271947-55272096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               333-483
               

               Cow position:
               chr3:66292080-66292230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               335-483
               

               Cow position:
               chr3:2067990-2067840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               336-476
               

               Cow position:
               chr3:3738574-3738436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               336-480
               

               Cow position:
               chr3:26218960-26219102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               336-483
               

               Cow position:
               chr3:3478162-3478308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 81
               

               Conread position:
               336-483
               

               Cow position:
               chr3:49650481-49650334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               339-479
               

               Cow position:
               chr3:51349913-51349773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               339-480
               

               Cow position:
               chr3:15506538-15506397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               135, 71
               

               Conread position:
               340-483
               

               Cow position:
               chr3:41652465-41652322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               341-480
               

               Cow position:
               chr3:83815700-83815838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               346-483
               

               Cow position:
               chr3:64135801-64135664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               346-484
               

               Cow position:
               chr3:59799331-59799193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               348-483
               

               Cow position:
               chr3:55109532-55109667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               350-479
               

               Cow position:
               chr3:3472119-3471990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               124, 108
               

               Conread position:
               350-479
               

               Cow position:
               chr3:58968824-58968953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               356-477
               

               Cow position:
               chr3:75711379-75711258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	186-484
Cow position:	chr3:31804521-31804822 (view UCSC Genome Browser custom track)
Alignm length:	311
Alignm identity:	215
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	11, 131
Conread position:	214-487
Cow position:	chr3:29596610-29596332 (view UCSC Genome Browser custom track)
Alignm length:	286
Alignm identity:	196
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	21, 7
Conread position:	216-441
Cow position:	chr3:63860394-63860623 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	156
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	16, 0
Conread position:	216-480
Cow position:	chr3:59605059-59604795 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	212
Alignm E-value:	0
Alignm gaps (pig, cow):	37, 133
Conread position:	217-479
Cow position:	chr3:49363321-49363059 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	193
Alignm E-value:	1.96182e-44
Alignm gaps (pig, cow):	11, 45
Conread position:	218-377
Cow position:	chr3:61190322-61190479 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	116
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	104, 38
Conread position:	221-480
Cow position:	chr3:71703670-71703427 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	181
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	23, 61
Conread position:	224-441
Cow position:	chr3:83705331-83705549 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	154
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	89, 11
Conread position:	226-484
Cow position:	chr3:59299776-59299518 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	196
Alignm E-value:	5.04467e-44
Alignm gaps (pig, cow):	85, 19
Conread position:	226-485
Cow position:	chr3:80709662-80709924 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	174
Alignm E-value:	5e-23
Alignm gaps (pig, cow):	88, 53
Conread position:	227-441
Cow position:	chr3:986218-986002 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	149
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	86, 29
Conread position:	227-479
Cow position:	chr3:17331922-17331680 (view UCSC Genome Browser custom track)
Alignm length:	256
Alignm identity:	194
Alignm E-value:	4.00001e-41
Alignm gaps (pig, cow):	35, 8
Conread position:	228-408
Cow position:	chr3:58929330-58929514 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	134
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	85, 28
Conread position:	228-417
Cow position:	chr3:57642006-57641812 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	146
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	85, 178
Conread position:	228-485
Cow position:	chr3:83454955-83455205 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	187
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	88, 18
Conread position:	230-434
Cow position:	chr3:79893295-79893503 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	144
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	83, 156
Conread position:	230-467
Cow position:	chr3:83770935-83770693 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	163
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	84, 0
Conread position:	230-469
Cow position:	chr3:41863829-41863584 (view UCSC Genome Browser custom track)
Alignm length:	247
Alignm identity:	168
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	25, 94
Conread position:	230-480
Cow position:	chr3:22668614-22668359 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	171
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	30, 145
Conread position:	230-483
Cow position:	chr3:30180282-30180031 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	175
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	231, 26