Non-Coding RNA Search

Cow genome map


           Conread name:
           rcmu26_a6.y1
        

               Conread position:
               205-470
               

               Cow position:
               chr5:42064491-42064214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               209-465
               

               Cow position:
               chr5:19335505-19335767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               105, 15
               

               Conread position:
               212-483
               

               Cow position:
               chr5:46681450-46681727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               214-480
               

               Cow position:
               chr5:59626703-59626972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 162
               

               Conread position:
               217-439
               

               Cow position:
               chr5:48061841-48062077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               219-483
               

               Cow position:
               chr5:57074069-57074335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               16, 69
               

               Conread position:
               220-484
               

               Cow position:
               chr5:7012585-7012852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 156
               

               Conread position:
               221-463
               

               Cow position:
               chr5:26167680-26167437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               94, 49
               

               Conread position:
               221-468
               

               Cow position:
               chr5:70271127-70270878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               221-478
               

               Cow position:
               chr5:23209220-23208958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               222-423
               

               Cow position:
               chr5:18289374-18289178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               223-480
               

               Cow position:
               chr5:39937376-39937115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               228-432
               

               Cow position:
               chr5:41984599-41984401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               7, 57
               

               Conread position:
               228-479
               

               Cow position:
               chr5:31052645-31052380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               229-484
               

               Cow position:
               chr5:40097851-40097592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 146
               

               Conread position:
               230-439
               

               Cow position:
               chr5:6876712-6876928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               230-449
               

               Cow position:
               chr5:41009756-41009973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               24, 136
               

               Conread position:
               230-455
               

               Cow position:
               chr5:49821684-49821452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               230-479
               

               Cow position:
               chr5:3772094-3771850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               128, 88
               

               Conread position:
               230-479
               

               Cow position:
               chr5:65753113-65752860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               230-480
               

               Cow position:
               chr5:52108007-52108269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               231-399
               

               Cow position:
               chr5:17537431-17537593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               231-479
               

               Cow position:
               chr5:44028061-44028303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               231-480
               

               Cow position:
               chr5:61726206-61725966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               231-485
               

               Cow position:
               chr5:57062274-57062535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               232-397
               

               Cow position:
               chr5:3626931-3627095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               39, 6
               

               Conread position:
               232-399
               

               Cow position:
               chr5:29060689-29060855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               81, 99
               

               Conread position:
               232-437
               

               Cow position:
               chr5:35394190-35394391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               232-445
               

               Cow position:
               chr5:62996209-62995991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               233-420
               

               Cow position:
               chr5:25462331-25462147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               115, 23
               

               Conread position:
               233-441
               

               Cow position:
               chr5:40122359-40122572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               233-477
               

               Cow position:
               chr5:42845350-42845591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 12
               

               Conread position:
               233-478
               

               Cow position:
               chr5:44446622-44446865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 85
               

               Conread position:
               233-479
               

               Cow position:
               chr5:50101130-50101376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               178, 27
               

               Conread position:
               233-485
               

               Cow position:
               chr5:20128302-20128046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 23
               

               Conread position:
               234-399
               

               Cow position:
               chr5:58487621-58487455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 97
               

               Conread position:
               234-437
               

               Cow position:
               chr5:19294272-19294484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               234-470
               

               Cow position:
               chr5:50723296-50723055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               234-476
               

               Cow position:
               chr5:991721-991467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               234-483
               

               Cow position:
               chr5:35208511-35208260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               79, 140
               

               Conread position:
               235-441
               

               Cow position:
               chr5:7675911-7676117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               78, 96
               

               Conread position:
               235-478
               

               Cow position:
               chr5:66339320-66339080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               62, 99
               

               Conread position:
               235-483
               

               Cow position:
               chr5:55232575-55232815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               235-485
               

               Cow position:
               chr5:29468031-29468286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               236-398
               

               Cow position:
               chr5:51012245-51012080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               77, 20
               

               Conread position:
               236-399
               

               Cow position:
               chr5:15770205-15770376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               236-405
               

               Cow position:
               chr5:56624265-56624443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               236-409
               

               Cow position:
               chr5:24108813-24108990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               77, 25
               

               Conread position:
               236-419
               

               Cow position:
               chr5:63300324-63300138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               236-421
               

               Cow position:
               chr5:35235438-35235631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               236-437
               

               Cow position:
               chr5:53779401-53779197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               236-468
               

               Cow position:
               chr5:7177397-7177162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               236-470
               

               Cow position:
               chr5:17828228-17828470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               236-477
               

               Cow position:
               chr5:12300160-12299913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               19, 77
               

               Conread position:
               236-478
               

               Cow position:
               chr5:43370948-43371193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               77, 20
               

               Conread position:
               236-478
               

               Cow position:
               chr5:60209900-60210142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 77
               

               Conread position:
               236-480
               

               Cow position:
               chr5:63241225-63240976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               80, 139
               

               Conread position:
               236-480
               

               Cow position:
               chr5:64591851-64592096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               30, 56
               

               Conread position:
               236-481
               

               Cow position:
               chr5:27179912-27179653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 146
               

               Conread position:
               236-483
               

               Cow position:
               chr5:50824829-50824589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               236-483
               

               Cow position:
               chr5:51053401-51053656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 239
               

               Conread position:
               236-483
               

               Cow position:
               chr5:57686502-57686741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               236-483
               

               Cow position:
               chr5:65679726-65679974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               236-483
               

               Cow position:
               chr5:69338061-69337816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               236-490
               

               Cow position:
               chr5:55965646-55965904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               77, 251
               

               Conread position:
               237-397
               

               Cow position:
               chr5:4728316-4728156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               16, 78
               

               Conread position:
               237-441
               

               Cow position:
               chr5:1693847-1694050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               237-478
               

               Cow position:
               chr5:61809450-61809685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               237-483
               

               Cow position:
               chr5:34922719-34922961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               237-485
               

               Cow position:
               chr5:29828293-29828040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 139
               

               Conread position:
               238-371
               

               Cow position:
               chr5:21237649-21237783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               73, 101
               

               Conread position:
               238-399
               

               Cow position:
               chr5:19626820-19626658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               75, 99
               

               Conread position:
               238-399
               

               Cow position:
               chr5:47335273-47335108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               238-409
               

               Cow position:
               chr5:12504550-12504720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               78, 100
               

               Conread position:
               238-410
               

               Cow position:
               chr5:32976007-32975827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               76, 50
               

               Conread position:
               238-421
               

               Cow position:
               chr5:64843719-64843913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               238-427
               

               Cow position:
               chr5:32935991-32935796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 161
               

               Conread position:
               238-437
               

               Cow position:
               chr5:43839751-43839957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 139
               

               Conread position:
               238-456
               

               Cow position:
               chr5:51289357-51289568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               238-465
               

               Cow position:
               chr5:15364114-15363896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               238-466
               

               Cow position:
               chr5:53055315-53055548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               73, 140
               

               Conread position:
               238-470
               

               Cow position:
               chr5:56549612-56549373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               75, 130
               

               Conread position:
               238-471
               

               Cow position:
               chr5:52136809-52137046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-478
               

               Cow position:
               chr5:43604385-43604142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 121
               

               Conread position:
               238-479
               

               Cow position:
               chr5:58688-58932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               75, 18
               

               Conread position:
               238-479
               

               Cow position:
               chr5:68537420-68537665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               76, 182
               

               Conread position:
               238-479
               

               Cow position:
               chr5:69461587-69461333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 160
               

               Conread position:
               238-480
               

               Cow position:
               chr5:12322567-12322806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 90
               

               Conread position:
               238-480
               

               Cow position:
               chr5:24995979-24996224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               238-480
               

               Cow position:
               chr5:41935411-41935652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               75, 143
               

               Conread position:
               238-480
               

               Cow position:
               chr5:54751057-54750814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 200
               

               Conread position:
               238-482
               

               Cow position:
               chr5:26548896-26549143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 111
               

               Conread position:
               238-482
               

               Cow position:
               chr5:36868980-36868734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               238-484
               

               Cow position:
               chr5:4280688-4280441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               203, 76
               

               Conread position:
               238-484
               

               Cow position:
               chr5:17834915-17835163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-484
               

               Cow position:
               chr5:29097606-29097363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               238-484
               

               Cow position:
               chr5:40889052-40889302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-484
               

               Cow position:
               chr5:46512524-46512773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 52
               

               Conread position:
               238-484
               

               Cow position:
               chr5:52853212-52852966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               8, 80
               

               Conread position:
               238-484
               

               Cow position:
               chr5:55966630-55966885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               238-484
               

               Cow position:
               chr5:57393059-57393309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 143
               

               Conread position:
               238-485
               

               Cow position:
               chr5:33273941-33273688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               75, 180
               

               Conread position:
               238-485
               

               Cow position:
               chr5:52001381-52001630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               76, 18
               

               Conread position:
               238-486
               

               Cow position:
               chr5:61999313-61999565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               238-486
               

               Cow position:
               chr5:64026771-64027026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               239-362
               

               Cow position:
               chr5:8149066-8149189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               74, 99
               

               Conread position:
               239-426
               

               Cow position:
               chr5:29599308-29599493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               239-428
               

               Cow position:
               chr5:34918585-34918397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               96, 22
               

               Conread position:
               239-441
               

               Cow position:
               chr5:62011925-62011721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               239-456
               

               Cow position:
               chr5:60595870-60596108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               74, 198
               

               Conread position:
               239-468
               

               Cow position:
               chr5:64060689-64060457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               239-469
               

               Cow position:
               chr5:51246894-51247121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               77, 44
               

               Conread position:
               239-470
               

               Cow position:
               chr5:26497445-26497668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 61
               

               Conread position:
               239-470
               

               Cow position:
               chr5:61456091-61455857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               239-478
               

               Cow position:
               chr5:5760067-5760312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               239-478
               

               Cow position:
               chr5:47602048-47601813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               239-479
               

               Cow position:
               chr5:61049574-61049332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               75, 19
               

               Conread position:
               239-480
               

               Cow position:
               chr5:16025240-16025462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               232, 75
               

               Conread position:
               239-480
               

               Cow position:
               chr5:34914812-34915054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               239-480
               

               Cow position:
               chr5:56613319-56613565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               239-483
               

               Cow position:
               chr5:35246861-35247117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               12, 253
               

               Conread position:
               239-485
               

               Cow position:
               chr5:16937791-16938028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               240-391
               

               Cow position:
               chr5:74050068-74049912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               240-399
               

               Cow position:
               chr5:59958411-59958254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               240-421
               

               Cow position:
               chr5:52211449-52211629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               240-440
               

               Cow position:
               chr5:1766053-1766260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 158
               

               Conread position:
               240-441
               

               Cow position:
               chr5:54127530-54127328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 93
               

               Conread position:
               240-467
               

               Cow position:
               chr5:55942142-55942367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               74, 21
               

               Conread position:
               240-479
               

               Cow position:
               chr5:22667310-22667070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               97, 21
               

               Conread position:
               240-483
               

               Cow position:
               chr5:49341794-49342053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               73, 16
               

               Conread position:
               240-483
               

               Cow position:
               chr5:56014964-56014727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               240-487
               

               Cow position:
               chr5:19752544-19752300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 178
               

               Conread position:
               240-487
               

               Cow position:
               chr5:26132853-26133105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               74, 137
               

               Conread position:
               240-487
               

               Cow position:
               chr5:54875453-54875705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               241-409
               

               Cow position:
               chr5:56643309-56643137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               241-416
               

               Cow position:
               chr5:26149274-26149097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 15
               

               Conread position:
               241-440
               

               Cow position:
               chr5:57526688-57526885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               72, 15
               

               Conread position:
               241-441
               

               Cow position:
               chr5:16185622-16185416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               241-470
               

               Cow position:
               chr5:44796495-44796724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               71, 94
               

               Conread position:
               241-483
               

               Cow position:
               chr5:26467867-26467622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               241-483
               

               Cow position:
               chr5:57101556-57101783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               142, 47
               

               Conread position:
               242-409
               

               Cow position:
               chr5:47960026-47960191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               72, 19
               

               Conread position:
               242-428
               

               Cow position:
               chr5:37253664-37253480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               242-437
               

               Cow position:
               chr5:6438786-6438979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               72, 22
               

               Conread position:
               242-469
               

               Cow position:
               chr5:57101286-57101512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               71, 94
               

               Conread position:
               242-481
               

               Cow position:
               chr5:34562249-34562013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               76, 67
               

               Conread position:
               243-399
               

               Cow position:
               chr5:28660470-28660310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               243-441
               

               Cow position:
               chr5:30221537-30221740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               243-483
               

               Cow position:
               chr5:35976733-35976509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               243-483
               

               Cow position:
               chr5:69383489-69383251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               243-485
               

               Cow position:
               chr5:30562168-30561926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               243-486
               

               Cow position:
               chr5:53835960-53835707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               69, 159
               

               Conread position:
               244-418
               

               Cow position:
               chr5:59662819-59662997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               244-423
               

               Cow position:
               chr5:31234942-31234769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               244-426
               

               Cow position:
               chr5:49207089-49207274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 90
               

               Conread position:
               244-479
               

               Cow position:
               chr5:66257872-66257639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               110, 81
               

               Conread position:
               244-483
               

               Cow position:
               chr5:35685171-35684934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               244-483
               

               Cow position:
               chr5:44847789-44848028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               184, 70
               

               Conread position:
               244-485
               

               Cow position:
               chr5:65776139-65776389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 224
               

               Conread position:
               245-364
               

               Cow position:
               chr5:21374879-21374999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               245-381
               

               Cow position:
               chr5:18706192-18706065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               245-479
               

               Cow position:
               chr5:56071095-56070859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 98
               

               Conread position:
               245-480
               

               Cow position:
               chr5:20994850-20995093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               245-480
               

               Cow position:
               chr5:70951655-70951881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               245-484
               

               Cow position:
               chr5:45186878-45187122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               48, 142
               

               Conread position:
               246-417
               

               Cow position:
               chr5:5030675-5030505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 88
               

               Conread position:
               246-417
               

               Cow position:
               chr5:67340117-67339945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               68, 94
               

               Conread position:
               246-419
               

               Cow position:
               chr5:22957639-22957470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-441
               

               Cow position:
               chr5:8736041-8736241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               68, 163
               

               Conread position:
               246-470
               

               Cow position:
               chr5:43858182-43858410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               67, 168
               

               Conread position:
               246-476
               

               Cow position:
               chr5:40241970-40241749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               246-478
               

               Cow position:
               chr5:36038769-36039001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               93, 58
               

               Conread position:
               246-479
               

               Cow position:
               chr5:32338725-32338965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               72, 26
               

               Conread position:
               246-480
               

               Cow position:
               chr5:21829100-21828867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               246-480
               

               Cow position:
               chr5:35969776-35969532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               67, 205
               

               Conread position:
               246-480
               

               Cow position:
               chr5:42670637-42670870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               72, 90
               

               Conread position:
               246-480
               

               Cow position:
               chr5:61914807-61914562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-483
               

               Cow position:
               chr5:11667948-11668190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               246-483
               

               Cow position:
               chr5:25035018-25035258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               68, 174
               

               Conread position:
               246-483
               

               Cow position:
               chr5:57755798-57756032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 154
               

               Conread position:
               246-483
               

               Cow position:
               chr5:57934884-57935112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               246-483
               

               Cow position:
               chr5:60016399-60016164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               246-485
               

               Cow position:
               chr5:12557051-12557298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               246-486
               

               Cow position:
               chr5:12654673-12654918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               67, 94
               

               Conread position:
               247-399
               

               Cow position:
               chr5:34639359-34639202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               247-421
               

               Cow position:
               chr5:75478683-75478857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               67, 34
               

               Conread position:
               247-440
               

               Cow position:
               chr5:24915290-24915488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               66, 128
               

               Conread position:
               247-441
               

               Cow position:
               chr5:57497191-57497386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               247-461
               

               Cow position:
               chr5:54312834-54312619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               67, 22
               

               Conread position:
               247-480
               

               Cow position:
               chr5:20288023-20288264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               247-483
               

               Cow position:
               chr5:30233145-30232904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               67, 135
               

               Conread position:
               247-486
               

               Cow position:
               chr5:25495116-25495367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               67, 38
               

               Conread position:
               247-486
               

               Cow position:
               chr5:64139798-64139554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               248-411
               

               Cow position:
               chr5:4824387-4824216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               248-426
               

               Cow position:
               chr5:29895405-29895224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               248-427
               

               Cow position:
               chr5:58401799-58401621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               248-441
               

               Cow position:
               chr5:26894477-26894681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               248-470
               

               Cow position:
               chr5:55068935-55068715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               248-477
               

               Cow position:
               chr5:2309324-2309554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               66, 113
               

               Conread position:
               248-479
               

               Cow position:
               chr5:42050778-42050553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               248-480
               

               Cow position:
               chr5:9893891-9894125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               66, 50
               

               Conread position:
               248-480
               

               Cow position:
               chr5:65967503-65967732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               248-483
               

               Cow position:
               chr5:28224676-28224448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               220, 65
               

               Conread position:
               248-484
               

               Cow position:
               chr5:22795440-22795212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               248-484
               

               Cow position:
               chr5:33834274-33834037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               65, 141
               

               Conread position:
               249-409
               

               Cow position:
               chr5:43922937-43923091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               13, 84
               

               Conread position:
               249-421
               

               Cow position:
               chr5:9559647-9559479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               249-466
               

               Cow position:
               chr5:66972663-66972442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 49
               

               Conread position:
               249-480
               

               Cow position:
               chr5:35459063-35459295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 80
               

               Conread position:
               249-480
               

               Cow position:
               chr5:39036015-39035779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               65, 122
               

               Conread position:
               249-483
               

               Cow position:
               chr5:64321995-64321750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               249-484
               

               Cow position:
               chr5:5257054-5257294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               249-486
               

               Cow position:
               chr5:56877703-56877475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               121, 65
               

               Conread position:
               250-415
               

               Cow position:
               chr5:64061245-64061084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               250-420
               

               Cow position:
               chr5:46479015-46479183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               250-451
               

               Cow position:
               chr5:6086109-6086315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               250-470
               

               Cow position:
               chr5:26262453-26262665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 91
               

               Conread position:
               250-477
               

               Cow position:
               chr5:21617687-21617460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               63, 90
               

               Conread position:
               250-478
               

               Cow position:
               chr5:3582788-3582561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 65
               

               Conread position:
               250-480
               

               Cow position:
               chr5:55956142-55955907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               250-486
               

               Cow position:
               chr5:65941018-65941256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 112
               

               Conread position:
               251-396
               

               Cow position:
               chr5:48104491-48104344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               251-399
               

               Cow position:
               chr5:71387432-71387287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               251-411
               

               Cow position:
               chr5:6245434-6245595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 89
               

               Conread position:
               251-420
               

               Cow position:
               chr5:19968129-19968300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               251-439
               

               Cow position:
               chr5:11303335-11303150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               251-444
               

               Cow position:
               chr5:3817456-3817652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               251-469
               

               Cow position:
               chr5:75227982-75228189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               251-484
               

               Cow position:
               chr5:7057166-7057407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               62, 156
               

               Conread position:
               251-484
               

               Cow position:
               chr5:47757003-47756772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 100
               

               Conread position:
               251-484
               

               Cow position:
               chr5:72895917-72895681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               252-371
               

               Cow position:
               chr5:55414210-55414330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               252-410
               

               Cow position:
               chr5:69765805-69765965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               252-444
               

               Cow position:
               chr5:75760038-75760239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               62, 175
               

               Conread position:
               252-446
               

               Cow position:
               chr5:37842049-37842246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               62, 99
               

               Conread position:
               252-464
               

               Cow position:
               chr5:26147818-26147606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               62, 18
               

               Conread position:
               252-464
               

               Cow position:
               chr5:65552491-65552696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 38
               

               Conread position:
               252-471
               

               Cow position:
               chr5:2240759-2240981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               62, 188
               

               Conread position:
               252-477
               

               Cow position:
               chr5:38833344-38833124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               86, 35
               

               Conread position:
               252-477
               

               Cow position:
               chr5:62172628-62172415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               252-479
               

               Cow position:
               chr5:22242544-22242772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               154, 66
               

               Conread position:
               252-479
               

               Cow position:
               chr5:45845460-45845691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               61, 86
               

               Conread position:
               253-396
               

               Cow position:
               chr5:54150063-54149929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               253-401
               

               Cow position:
               chr5:45854730-45854575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               253-419
               

               Cow position:
               chr5:34787801-34787634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 87
               

               Conread position:
               253-424
               

               Cow position:
               chr5:52849310-52849140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               253-426
               

               Cow position:
               chr5:60100691-60100523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               253-426
               

               Cow position:
               chr5:60153996-60153828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               253-427
               

               Cow position:
               chr5:60207934-60207760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               86, 65
               

               Conread position:
               253-472
               

               Cow position:
               chr5:51298486-51298705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               94, 65
               

               Conread position:
               253-479
               

               Cow position:
               chr5:17086788-17087020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 157
               

               Conread position:
               253-479
               

               Cow position:
               chr5:64175901-64176126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               253-483
               

               Cow position:
               chr5:7044477-7044709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               69, 65
               

               Conread position:
               253-483
               

               Cow position:
               chr5:52164944-52165181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               61, 133
               

               Conread position:
               253-483
               

               Cow position:
               chr5:74643455-74643679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               253-485
               

               Cow position:
               chr5:14550353-14550590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               254-483
               

               Cow position:
               chr5:23168602-23168830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               254-485
               

               Cow position:
               chr5:56860673-56860441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               7, 103
               

               Conread position:
               255-440
               

               Cow position:
               chr5:57399024-57399213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 174
               

               Conread position:
               256-375
               

               Cow position:
               chr5:74690026-74690150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-396
               

               Cow position:
               chr5:18579115-18578975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               104, 58
               

               Conread position:
               256-413
               

               Cow position:
               chr5:55949452-55949610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               57, 147
               

               Conread position:
               256-423
               

               Cow position:
               chr5:21339034-21339213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-423
               

               Cow position:
               chr5:21721250-21721414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               256-426
               

               Cow position:
               chr5:52192212-52192376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               256-426
               

               Cow position:
               chr5:70572584-70572424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               147, 57
               

               Conread position:
               256-433
               

               Cow position:
               chr5:57086836-57087017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               256-434
               

               Cow position:
               chr5:74887673-74887855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-441
               

               Cow position:
               chr5:12562534-12562722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               145, 58
               

               Conread position:
               256-441
               

               Cow position:
               chr5:19079469-19079290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-446
               

               Cow position:
               chr5:15991419-15991606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               256-453
               

               Cow position:
               chr5:34288028-34288224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               256-457
               

               Cow position:
               chr5:35190332-35190132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 81
               

               Conread position:
               256-469
               

               Cow position:
               chr5:73167787-73168001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               256-470
               

               Cow position:
               chr5:34347507-34347719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               57, 152
               

               Conread position:
               256-470
               

               Cow position:
               chr5:60948358-60948142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               58, 162
               

               Conread position:
               256-476
               

               Cow position:
               chr5:17105071-17104856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               256-479
               

               Cow position:
               chr5:12902145-12901923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 192
               

               Conread position:
               256-479
               

               Cow position:
               chr5:14903838-14904069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 47
               

               Conread position:
               256-479
               

               Cow position:
               chr5:28302530-28302745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               183, 32
               

               Conread position:
               256-479
               

               Cow position:
               chr5:30303107-30302896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-479
               

               Cow position:
               chr5:56548792-56548572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               256-480
               

               Cow position:
               chr5:5856086-5855857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-480
               

               Cow position:
               chr5:12434761-12434541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               219, 57
               

               Conread position:
               256-480
               

               Cow position:
               chr5:34625174-34624958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               164, 58
               

               Conread position:
               256-480
               

               Cow position:
               chr5:67634282-67634518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               256-482
               

               Cow position:
               chr5:56524388-56524171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-483
               

               Cow position:
               chr5:29903317-29903527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               256-483
               

               Cow position:
               chr5:30628927-30629163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               58, 113
               

               Conread position:
               256-483
               

               Cow position:
               chr5:33560512-33560738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               256-483
               

               Cow position:
               chr5:43403135-43402901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               58, 111
               

               Conread position:
               256-483
               

               Cow position:
               chr5:46540834-46541059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               57, 84
               

               Conread position:
               256-483
               

               Cow position:
               chr5:49474328-49474549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-483
               

               Cow position:
               chr5:63192528-63192744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               256-484
               

               Cow position:
               chr5:50575994-50575778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               224, 11
               

               Conread position:
               256-484
               

               Cow position:
               chr5:59627318-59627096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               256-486
               

               Cow position:
               chr5:31475910-31475676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               57, 231
               

               Conread position:
               256-486
               

               Cow position:
               chr5:56028319-56028546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               58, 81
               

               Conread position:
               257-396
               

               Cow position:
               chr5:21520225-21520358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               257-466
               

               Cow position:
               chr5:16893553-16893758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               257-477
               

               Cow position:
               chr5:73253630-73253413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 83
               

               Conread position:
               257-478
               

               Cow position:
               chr5:44810012-44810238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               257-479
               

               Cow position:
               chr5:69099944-69099720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               56, 86
               

               Conread position:
               257-480
               

               Cow position:
               chr5:11229446-11229673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               57, 47
               

               Conread position:
               257-480
               

               Cow position:
               chr5:19278478-19278707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 109
               

               Conread position:
               257-480
               

               Cow position:
               chr5:30247300-30247523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               56, 113
               

               Conread position:
               257-486
               

               Cow position:
               chr5:35763469-35763264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               220, 26
               

               Conread position:
               258-477
               

               Cow position:
               chr5:30253964-30253743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               258-479
               

               Cow position:
               chr5:40109708-40109493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               258-480
               

               Cow position:
               chr5:14314740-14314527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               90, 56
               

               Conread position:
               258-480
               

               Cow position:
               chr5:30276911-30276689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               258-480
               

               Cow position:
               chr5:39447301-39447536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               258-484
               

               Cow position:
               chr5:14920702-14920934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               58, 204
               

               Conread position:
               259-423
               

               Cow position:
               chr5:19561223-19561392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               259-483
               

               Cow position:
               chr5:18062087-18062323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               260-419
               

               Cow position:
               chr5:66287163-66287005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 10
               

               Conread position:
               260-443
               

               Cow position:
               chr5:41885136-41884955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               53, 71
               

               Conread position:
               260-456
               

               Cow position:
               chr5:44722291-44722489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 136
               

               Conread position:
               260-479
               

               Cow position:
               chr5:4267882-4267670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               260-480
               

               Cow position:
               chr5:51065737-51065529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               260-483
               

               Cow position:
               chr5:41165304-41165084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               260-483
               

               Cow position:
               chr5:60523949-60523729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               195, 58
               

               Conread position:
               260-483
               

               Cow position:
               chr5:74039784-74040007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               260-497
               

               Cow position:
               chr5:44163151-44163389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               58, 41
               

               Conread position:
               261-425
               

               Cow position:
               chr5:74065299-74065463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 100
               

               Conread position:
               261-441
               

               Cow position:
               chr5:44734506-44734687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               261-479
               

               Cow position:
               chr5:72045456-72045674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               262-480
               

               Cow position:
               chr5:63234602-63234825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               9, 177
               

               Conread position:
               262-484
               

               Cow position:
               chr5:65136477-65136263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               86, 20
               

               Conread position:
               263-479
               

               Cow position:
               chr5:50600265-50600048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               51, 77
               

               Conread position:
               263-485
               

               Cow position:
               chr5:20779180-20779401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               264-484
               

               Cow position:
               chr5:30845324-30845106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 73
               

               Conread position:
               266-441
               

               Cow position:
               chr5:51233808-51233981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               267-468
               

               Cow position:
               chr5:38169107-38168905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               269-463
               

               Cow position:
               chr5:5847631-5847829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 175
               

               Conread position:
               269-480
               

               Cow position:
               chr5:44053833-44054053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 133
               

               Conread position:
               269-483
               

               Cow position:
               chr5:12673267-12673477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               269-484
               

               Cow position:
               chr5:72006284-72006495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               270-423
               

               Cow position:
               chr5:56754144-56753989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               270-431
               

               Cow position:
               chr5:65745556-65745717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 48
               

               Conread position:
               270-441
               

               Cow position:
               chr5:16668905-16668735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               270-441
               

               Cow position:
               chr5:20812761-20812584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               44, 124
               

               Conread position:
               270-441
               

               Cow position:
               chr5:53980540-53980716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               270-460
               

               Cow position:
               chr5:50942948-50943138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               270-466
               

               Cow position:
               chr5:12351600-12351794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               270-479
               

               Cow position:
               chr5:66551680-66551897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               270-480
               

               Cow position:
               chr5:53947111-53946896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               270-482
               

               Cow position:
               chr5:68719079-68718866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               270-483
               

               Cow position:
               chr5:17554823-17555036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               43, 66
               

               Conread position:
               270-483
               

               Cow position:
               chr5:45397777-45397569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               272-472
               

               Cow position:
               chr5:15721878-15722067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               272-484
               

               Cow position:
               chr5:66366719-66366505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               42, 147
               

               Conread position:
               273-479
               

               Cow position:
               chr5:35826807-35826602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               273-485
               

               Cow position:
               chr5:16939383-16939600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               275-483
               

               Cow position:
               chr5:56334312-56334512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               277-441
               

               Cow position:
               chr5:51125813-51125971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               277-467
               

               Cow position:
               chr5:46704095-46704287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               277-479
               

               Cow position:
               chr5:49501613-49501824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               279-478
               

               Cow position:
               chr5:6503673-6503880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               280-484
               

               Cow position:
               chr5:55795768-55795972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               132, 38
               

               Conread position:
               280-486
               

               Cow position:
               chr5:69636411-69636217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               283-480
               

               Cow position:
               chr5:54350172-54350362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               286-420
               

               Cow position:
               chr5:4981644-4981509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               286-476
               

               Cow position:
               chr5:54425647-54425472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               286-480
               

               Cow position:
               chr5:71724485-71724301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               156, 26
               

               Conread position:
               292-480
               

               Cow position:
               chr5:17602015-17602201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 140
               

               Conread position:
               295-475
               

               Cow position:
               chr5:17604949-17605130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               70, 29
               

               Conread position:
               296-483
               

               Cow position:
               chr5:7193599-7193415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               300-480
               

               Cow position:
               chr5:16205975-16206154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 20
               

               Conread position:
               316-480
               

               Cow position:
               chr5:67118581-67118419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               317-480
               

               Cow position:
               chr5:58555299-58555135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               318-483
               

               Cow position:
               chr5:43457372-43457535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               88, 19
               

               Conread position:
               319-478
               

               Cow position:
               chr5:4709992-4710150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               319-480
               

               Cow position:
               chr5:24069547-24069389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               142, 33
               

               Conread position:
               319-483
               

               Cow position:
               chr5:50533228-50533388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               320-423
               

               Cow position:
               chr5:14354234-14354131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-434
               

               Cow position:
               chr5:60126849-60126735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-445
               

               Cow position:
               chr5:38647799-38647674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-468
               

               Cow position:
               chr5:35647504-35647354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               320-468
               

               Cow position:
               chr5:44726176-44726323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               320-477
               

               Cow position:
               chr5:30949756-30949913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-479
               

               Cow position:
               chr5:4166801-4166642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 61
               

               Conread position:
               320-480
               

               Cow position:
               chr5:40242201-40242045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               320-480
               

               Cow position:
               chr5:61875696-61875542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               320-483
               

               Cow position:
               chr5:46509705-46509869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               320-483
               

               Cow position:
               chr5:56338862-56339025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               320-483
               

               Cow position:
               chr5:67212519-67212357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               320-484
               

               Cow position:
               chr5:43992483-43992318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               320-485
               

               Cow position:
               chr5:45419978-45420143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               321-453
               

               Cow position:
               chr5:51490444-51490576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               321-480
               

               Cow position:
               chr5:43929578-43929736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               321-483
               

               Cow position:
               chr5:29912579-29912414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 52
               

               Conread position:
               321-515
               

               Cow position:
               chr5:9369113-9369308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               151, 161
               

               Conread position:
               324-472
               

               Cow position:
               chr5:24136869-24136722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               324-478
               

               Cow position:
               chr5:9170429-9170580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               324-480
               

               Cow position:
               chr5:49440721-49440872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               324-483
               

               Cow position:
               chr5:37646389-37646547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               325-469
               

               Cow position:
               chr5:62378934-62378793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               325-479
               

               Cow position:
               chr5:60183960-60183803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               325-480
               

               Cow position:
               chr5:58446960-58446806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               326-459
               

               Cow position:
               chr5:55850033-55849905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               326-478
               

               Cow position:
               chr5:41545740-41545892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               327-464
               

               Cow position:
               chr5:57737251-57737114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               329-480
               

               Cow position:
               chr5:54375352-54375507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               329-480
               

               Cow position:
               chr5:67244068-67243920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 97
               

               Conread position:
               329-483
               

               Cow position:
               chr5:14629655-14629814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               331-478
               

               Cow position:
               chr5:45126800-45126652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               332-451
               

               Cow position:
               chr5:29149035-29148919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               332-484
               

               Cow position:
               chr5:5110922-5111081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               334-483
               

               Cow position:
               chr5:6045441-6045290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               334-484
               

               Cow position:
               chr5:37808518-37808668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               335-471
               

               Cow position:
               chr5:35982591-35982730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               335-483
               

               Cow position:
               chr5:20422050-20422193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               336-480
               

               Cow position:
               chr5:7698143-7697998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 54
               

               Conread position:
               336-484
               

               Cow position:
               chr5:9233845-9233994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               338-483
               

               Cow position:
               chr5:63150027-63150172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 92
               

               Conread position:
               340-480
               

               Cow position:
               chr5:56517243-56517103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               95, 76
               

               Conread position:
               346-466
               

               Cow position:
               chr5:45804193-45804073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               349-481
               

               Cow position:
               chr5:45574235-45574367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-482
               

               Cow position:
               chr5:26253043-26253176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               349-483
               

               Cow position:
               chr5:15598108-15598239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               352-484
               

               Cow position:
               chr5:26150294-26150424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               358-470
               

               Cow position:
               chr5:58793486-58793598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	205-470
Cow position:	chr5:42064491-42064214 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	182
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	26, 0
Conread position:	209-465
Cow position:	chr5:19335505-19335767 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	170
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	105, 15
Conread position:	212-483
Cow position:	chr5:46681450-46681727 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	190
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	20, 66
Conread position:	214-480
Cow position:	chr5:59626703-59626972 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	209
Alignm E-value:	0
Alignm gaps (pig, cow):	11, 162
Conread position:	217-439
Cow position:	chr5:48061841-48062077 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	169
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	34, 21
Conread position:	219-483
Cow position:	chr5:57074069-57074335 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	202
Alignm E-value:	3.9937e-43
Alignm gaps (pig, cow):	16, 69
Conread position:	220-484
Cow position:	chr5:7012585-7012852 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	184
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	12, 156
Conread position:	221-463
Cow position:	chr5:26167680-26167437 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	178
Alignm E-value:	3e-38
Alignm gaps (pig, cow):	94, 49
Conread position:	221-468
Cow position:	chr5:70271127-70270878 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	179
Alignm E-value:	6e-36
Alignm gaps (pig, cow):	93, 12
Conread position:	221-478
Cow position:	chr5:23209220-23208958 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	172
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	93, 0
Conread position:	222-423
Cow position:	chr5:18289374-18289178 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	141
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	13, 0
Conread position:	223-480
Cow position:	chr5:39937376-39937115 (view UCSC Genome Browser custom track)
Alignm length:	264
Alignm identity:	187
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	38, 52
Conread position:	228-432
Cow position:	chr5:41984599-41984401 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	161
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	7, 57
Conread position:	228-479
Cow position:	chr5:31052645-31052380 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	176
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	18, 0
Conread position:	229-484
Cow position:	chr5:40097851-40097592 (view UCSC Genome Browser custom track)
Alignm length:	262
Alignm identity:	170
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	16, 146
Conread position:	230-439
Cow position:	chr5:6876712-6876928 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	162
Alignm E-value:	6e-36
Alignm gaps (pig, cow):	28, 0
Conread position:	230-449
Cow position:	chr5:41009756-41009973 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	168
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	24, 136
Conread position:	230-455
Cow position:	chr5:49821684-49821452 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	166
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	13, 0
Conread position:	230-479
Cow position:	chr5:3772094-3771850 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	173
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	128, 88
Conread position:	230-480
Cow position:	chr5:52108007-52108269 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	178
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	83, 37