• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rcmu27_f11.y1
        

               
Conread position:
               
75-507
               

               
Cow position:
               
chr13:13176949-13176531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
124-556
               

               
Cow position:
               
chr13:20509987-20509566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
138-370
               

               
Cow position:
               
chr13:2339677-2339443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 142
               

               
Conread position:
               
146-560
               

               
Cow position:
               
chr13:13261241-13260830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
147-301
               

               
Cow position:
               
chr13:33352135-33352284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-317
               

               
Cow position:
               
chr13:27985197-27985364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-320
               

               
Cow position:
               
chr13:60436651-60436824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
147-348
               

               
Cow position:
               
chr13:20683178-20682975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
147-357
               

               
Cow position:
               
chr13:48251760-48251964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
147-361
               

               
Cow position:
               
chr13:37516904-37517119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
147-363
               

               
Cow position:
               
chr13:54093972-54093760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
147-388
               

               
Cow position:
               
chr13:15172175-15172414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
147-417
               

               
Cow position:
               
chr13:1011564-1011302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-425
               

               
Cow position:
               
chr13:3003679-3003390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
147-472
               

               
Cow position:
               
chr13:61166225-61166534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
147-480
               

               
Cow position:
               
chr13:18244088-18243770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
147-494
               

               
Cow position:
               
chr13:19138669-19138334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
204, 29
               

               
Conread position:
               
147-508
               

               
Cow position:
               
chr13:10928758-10929108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
147-514
               

               
Cow position:
               
chr13:37484038-37484406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-539
               

               
Cow position:
               
chr13:20683891-20684282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
192, 25
               

               
Conread position:
               
147-539
               

               
Cow position:
               
chr13:23856447-23856058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
147-567
               

               
Cow position:
               
chr13:12574866-12574449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
166, 29
               

               
Conread position:
               
147-568
               

               
Cow position:
               
chr13:19393519-19393116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
147-570
               

               
Cow position:
               
chr13:18166962-18166554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 27
               

               
Conread position:
               
147-570
               

               
Cow position:
               
chr13:35659985-35659577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
211, 27
               

               
Conread position:
               
147-573
               

               
Cow position:
               
chr13:10924674-10925104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 44
               

               
Conread position:
               
147-573
               

               
Cow position:
               
chr13:17021488-17021906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
147-573
               

               
Cow position:
               
chr13:23960574-23960993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr13:5278956-5279389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 88
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr13:15869351-15868926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 29
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr13:20174971-20174555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr13:21287858-21288268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr13:33256728-33256314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr13:61047438-61047027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
148-575
               

               
Cow position:
               
chr13:21241861-21242259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
155-336
               

               
Cow position:
               
chr13:15740294-15740109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
155-533
               

               
Cow position:
               
chr13:20705975-20706348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
155-575
               

               
Cow position:
               
chr13:20088475-20088902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
155-575
               

               
Cow position:
               
chr13:57002960-57002539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 140
               

               
Conread position:
               
157-508
               

               
Cow position:
               
chr13:9593732-9593386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 82
               

               
Conread position:
               
158-352
               

               
Cow position:
               
chr13:27027546-27027748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
158-358
               

               
Cow position:
               
chr13:2192929-2192731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
158-424
               

               
Cow position:
               
chr13:16833856-16834111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 56
               

               
Conread position:
               
160-358
               

               
Cow position:
               
chr13:8202663-8202856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
160-508
               

               
Cow position:
               
chr13:43139007-43139334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
161-280
               

               
Cow position:
               
chr13:26098364-26098245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
161-337
               

               
Cow position:
               
chr13:15947853-15947672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 9
               

               
Conread position:
               
161-518
               

               
Cow position:
               
chr13:21176101-21176449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
161-567
               

               
Cow position:
               
chr13:37592722-37593126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 12
               

               
Conread position:
               
162-539
               

               
Cow position:
               
chr13:40943465-40943089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
163-491
               

               
Cow position:
               
chr13:15234128-15233823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
140, 11
               

               
Conread position:
               
163-493
               

               
Cow position:
               
chr13:52879628-52879297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
163-503
               

               
Cow position:
               
chr13:12283054-12282711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
163-508
               

               
Cow position:
               
chr13:20839783-20839446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
163-511
               

               
Cow position:
               
chr13:17745455-17745125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
176, 11
               

               
Conread position:
               
163-519
               

               
Cow position:
               
chr13:13501402-13501748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
163-533
               

               
Cow position:
               
chr13:51940947-51940587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
163-536
               

               
Cow position:
               
chr13:12546689-12547056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
163-537
               

               
Cow position:
               
chr13:60974294-60973931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
163-548
               

               
Cow position:
               
chr13:15446263-15445885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr13:1231868-1231459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
84, 221
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr13:17114163-17114564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 33
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr13:45353262-45352844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 11
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr13:46516284-46515873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
165-337
               

               
Cow position:
               
chr13:11147520-11147347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
165-337
               

               
Cow position:
               
chr13:33054181-33054350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
165-337
               

               
Cow position:
               
chr13:37985536-37985714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-358
               

               
Cow position:
               
chr13:51108706-51108510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
114, 79
               

               
Conread position:
               
165-412
               

               
Cow position:
               
chr13:52199303-52199062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
165-416
               

               
Cow position:
               
chr13:13266016-13265778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
172, 9
               

               
Conread position:
               
165-493
               

               
Cow position:
               
chr13:20816527-20816218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-500
               

               
Cow position:
               
chr13:25531574-25531902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
165-502
               

               
Cow position:
               
chr13:43194389-43194055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 9
               

               
Conread position:
               
165-504
               

               
Cow position:
               
chr13:6153565-6153900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
165-508
               

               
Cow position:
               
chr13:20563211-20562873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
68, 9
               

               
Conread position:
               
165-530
               

               
Cow position:
               
chr13:13465576-13465910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
352, 9
               

               
Conread position:
               
165-533
               

               
Cow position:
               
chr13:51821678-51822019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
345, 9
               

               
Conread position:
               
165-563
               

               
Cow position:
               
chr13:41806990-41806601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
165-567
               

               
Cow position:
               
chr13:40491447-40491042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-571
               

               
Cow position:
               
chr13:20814066-20814453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-573
               

               
Cow position:
               
chr13:44626594-44626184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-573
               

               
Cow position:
               
chr13:54702404-54702000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr13:17855588-17855184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr13:25927006-25926605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr13:49805189-49804802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
169-337
               

               
Cow position:
               
chr13:2404955-2404784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
170-575
               

               
Cow position:
               
chr13:48598114-48597726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
167, 56
               

               
Conread position:
               
171-284
               

               
Cow position:
               
chr13:21988897-21989010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
171-567
               

               
Cow position:
               
chr13:12977772-12977401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
171-575
               

               
Cow position:
               
chr13:15974819-15974435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
167, 64
               

               
Conread position:
               
173-538
               

               
Cow position:
               
chr13:17439559-17439918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
173-575
               

               
Cow position:
               
chr13:19022485-19022081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
173-575
               

               
Cow position:
               
chr13:43480268-43479878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
174-273
               

               
Cow position:
               
chr13:14576876-14576777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
174-273
               

               
Cow position:
               
chr13:46329261-46329360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
174-283
               

               
Cow position:
               
chr13:25453376-25453263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr13:53308704-53308538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
174-329
               

               
Cow position:
               
chr13:37947805-37947950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr13:17815977-17815813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr13:17994132-17993974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr13:18551654-18551489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr13:19555958-19555803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
174-338
               

               
Cow position:
               
chr13:14927445-14927279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-350
               

               
Cow position:
               
chr13:38485037-38484864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-351
               

               
Cow position:
               
chr13:21210068-21209888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-352
               

               
Cow position:
               
chr13:34556127-34556310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
174-355
               

               
Cow position:
               
chr13:6606815-6606999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 118
               

               
Conread position:
               
174-355
               

               
Cow position:
               
chr13:21708387-21708209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
174-356
               

               
Cow position:
               
chr13:562932-563119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
174-356
               

               
Cow position:
               
chr13:16270141-16269946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
174-356
               

               
Cow position:
               
chr13:54381728-54381914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
174-357
               

               
Cow position:
               
chr13:4553005-4552825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
162, 24
               

               
Conread position:
               
174-357
               

               
Cow position:
               
chr13:36948964-36949151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr13:4038086-4037903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
110, 136
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr13:32017316-32017505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 117
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr13:16024795-16024607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr13:61170509-61170704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
174-363
               

               
Cow position:
               
chr13:37946010-37946191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
174-364
               

               
Cow position:
               
chr13:20530935-20531132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr13:2463023-2463219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
174-369
               

               
Cow position:
               
chr13:1780039-1779837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr13:7257607-7257403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 142
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr13:25261602-25261801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr13:60690516-60690718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
174-372
               

               
Cow position:
               
chr13:39948213-39948409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
165, 66
               

               
Conread position:
               
174-374
               

               
Cow position:
               
chr13:34052395-34052584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-376
               

               
Cow position:
               
chr13:38012567-38012359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 143
               

               
Conread position:
               
174-378
               

               
Cow position:
               
chr13:54237552-54237359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
164, 69
               

               
Conread position:
               
174-380
               

               
Cow position:
               
chr13:20536706-20536497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
174-383
               

               
Cow position:
               
chr13:9884974-9884762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-407
               

               
Cow position:
               
chr13:37980441-37980664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
163, 59
               

               
Conread position:
               
174-415
               

               
Cow position:
               
chr13:52922294-52922068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
174-416
               

               
Cow position:
               
chr13:12682335-12682574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-416
               

               
Cow position:
               
chr13:18215632-18215416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
174-416
               

               
Cow position:
               
chr13:55295419-55295651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
162, 55
               

               
Conread position:
               
174-417
               

               
Cow position:
               
chr13:6975584-6975824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
174-429
               

               
Cow position:
               
chr13:30026318-30026068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
174-440
               

               
Cow position:
               
chr13:33517718-33517975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
162, 104
               

               
Conread position:
               
174-460
               

               
Cow position:
               
chr13:24376696-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
174-463
               

               
Cow position:
               
chr13:21039392-21039674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
134, 190
               

               
Conread position:
               
174-469
               

               
Cow position:
               
chr13:13306312-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 170
               

               
Conread position:
               
174-472
               

               
Cow position:
               
chr13:25062616-25062329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
174-481
               

               
Cow position:
               
chr13:4464213-4463919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr13:1042750-1043071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 197
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr13:34941450-34941751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
234, 69
               

               
Conread position:
               
174-491
               

               
Cow position:
               
chr13:8524416-8524721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
163, 50
               

               
Conread position:
               
174-494
               

               
Cow position:
               
chr13:9643676-9643993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
51, 192
               

               
Conread position:
               
174-495
               

               
Cow position:
               
chr13:8201280-8201590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
163, 101
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr13:20649777-20650101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
174-504
               

               
Cow position:
               
chr13:18989911-18989606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 96
               

               
Conread position:
               
174-506
               

               
Cow position:
               
chr13:7663223-7663540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
163, 50
               

               
Conread position:
               
174-508
               

               
Cow position:
               
chr13:12202571-12202242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
198, 80
               

               
Conread position:
               
174-508
               

               
Cow position:
               
chr13:37981546-37981864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr13:38277931-38278271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
146, 76
               

               
Conread position:
               
174-514
               

               
Cow position:
               
chr13:12614466-12614126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 201
               

               
Conread position:
               
174-517
               

               
Cow position:
               
chr13:23270007-23270334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
165, 76
               

               
Conread position:
               
174-518
               

               
Cow position:
               
chr13:11061193-11060857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
174-519
               

               
Cow position:
               
chr13:31814073-31813742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
323, 60
               

               
Conread position:
               
174-519
               

               
Cow position:
               
chr13:56686633-56686303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
163, 50
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr13:40722504-40722839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr13:43762371-43762037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr13:48037826-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
159, 50
               

               
Conread position:
               
174-521
               

               
Cow position:
               
chr13:54344982-54344648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
174-525
               

               
Cow position:
               
chr13:17613552-17613208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 184
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr13:9974862-9975214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
58, 188
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr13:52585814-52586176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 76
               

               
Conread position:
               
174-528
               

               
Cow position:
               
chr13:12990053-12989711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
174-528
               

               
Cow position:
               
chr13:34035574-34035229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
56, 168
               

               
Conread position:
               
174-532
               

               
Cow position:
               
chr13:45604212-45604560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr13:38283778-38284124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr13:60966970-60966623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
174-536
               

               
Cow position:
               
chr13:3315468-3315823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
174-536
               

               
Cow position:
               
chr13:24754090-24753743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
174-537
               

               
Cow position:
               
chr13:40652139-40651785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr13:16015013-16014661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr13:17970828-17971179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr13:36771219-36771571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 50
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr13:60429872-60430227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
163, 55
               

               
Conread position:
               
174-539
               

               
Cow position:
               
chr13:6086694-6087043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
174-542
               

               
Cow position:
               
chr13:34508082-34507732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 136
               

               
Conread position:
               
174-543
               

               
Cow position:
               
chr13:46324584-46324942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
174-546
               

               
Cow position:
               
chr13:20679551-20679179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
107, 53
               

               
Conread position:
               
174-546
               

               
Cow position:
               
chr13:56154955-56155309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
174-552
               

               
Cow position:
               
chr13:25695562-25695931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
101, 192
               

               
Conread position:
               
174-557
               

               
Cow position:
               
chr13:11460831-11460460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-558
               

               
Cow position:
               
chr13:14544328-14543965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-559
               

               
Cow position:
               
chr13:52894350-52893978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
101, 73
               

               
Conread position:
               
174-560
               

               
Cow position:
               
chr13:17291924-17292296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
174-560
               

               
Cow position:
               
chr13:20879629-20879993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
174-560
               

               
Cow position:
               
chr13:43594909-43595275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 73
               

               
Conread position:
               
174-560
               

               
Cow position:
               
chr13:53195086-53195450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
174-565
               

               
Cow position:
               
chr13:18491800-18491425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 22
               

               
Conread position:
               
174-565
               

               
Cow position:
               
chr13:19882829-19883207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr13:6616542-6616938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 117
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr13:12448783-12449165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
62, 7
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr13:25547387-25547761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr13:37818551-37818924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
165, 29
               

               
Conread position:
               
174-568
               

               
Cow position:
               
chr13:20378131-20378498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr13:52057745-52057379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
174-571
               

               
Cow position:
               
chr13:9587377-9587764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 185
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr13:15288720-15289100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr13:19023633-19024033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 137
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr13:20666180-20666567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr13:23479235-23478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr13:35526011-35526380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr13:2774330-2773933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 43
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr13:34728631-34729025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
108, 142
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr13:41918956-41919342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr13:60341020-60340625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
55, 170
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:971692-972080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
165, 61
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:1155502-1155890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 111
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:2884259-2883874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:5263080-5263462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:6974366-6973979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:7059681-7059275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 187
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:8195288-8194913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 129
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:8362540-8362930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 158
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:9142490-9142090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
142, 50
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:11260460-11260094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
162, 61
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:12045127-12045529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:12670239-12670635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:13089230-13088849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:13320982-13320614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:14063318-14063704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 76
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:15192688-15193071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
165, 55
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:16292752-16292354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
65, 183
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:17821053-17821441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:19033752-19033372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
135, 52
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:20605913-20606304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 122
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:20784794-20784411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:20820634-20821020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
162, 61
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:20880721-20881104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
165, 50
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:22115910-22115492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:23667469-23667072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:24155747-24155327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:27525055-27525443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:30651381-30651002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
74, 40
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:31808718-31808342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
101, 86
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:32283333-32282941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:33875868-33875489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:34263167-34263556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
165, 67
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:34281886-34281498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:37069555-37069158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 100
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:37521526-37521932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 203
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:37804085-37803696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:38329836-38329435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:42860364-42860753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:44323108-44322709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:46112173-46111785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
127, 73
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:46525236-46525612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:51014974-51015367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:52227894-52228281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
111, 183
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:52284115-52283725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
74, 131
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:52637488-52637114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
65, 110
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:55673999-55674393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:58043835-58043442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 121
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:60508910-60509307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr13:60599736-60600119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
175-351
               

               
Cow position:
               
chr13:46311830-46311996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
175-365
               

               
Cow position:
               
chr13:15162460-15162638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
175-507
               

               
Cow position:
               
chr13:6060802-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
175-507
               

               
Cow position:
               
chr13:22085546-22085865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
164, 72
               

               
Conread position:
               
175-533
               

               
Cow position:
               
chr13:7076461-7076112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
175-533
               

               
Cow position:
               
chr13:55315984-55316342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
161, 100
               

               
Conread position:
               
175-534
               

               
Cow position:
               
chr13:5713499-5713169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
162, 60
               

               
Conread position:
               
175-538
               

               
Cow position:
               
chr13:23166891-23167253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 100
               

               
Conread position:
               
175-570
               

               
Cow position:
               
chr13:152156-151787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
175-570
               

               
Cow position:
               
chr13:24369789-24369406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
175-573
               

               
Cow position:
               
chr13:9906948-9906547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
52, 120
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr13:15041267-15041658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 190
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr13:18852281-18851905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
164, 74
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr13:24586252-24585865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr13:42114226-42113832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 190
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr13:51528241-51528624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
176-358
               

               
Cow position:
               
chr13:26261590-26261778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
53, 115
               

               
Conread position:
               
176-362
               

               
Cow position:
               
chr13:9246918-9246739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 59
               

               
Conread position:
               
176-363
               

               
Cow position:
               
chr13:48944865-48944686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
137, 53
               

               
Conread position:
               
176-364
               

               
Cow position:
               
chr13:17622488-17622299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
176-365
               

               
Cow position:
               
chr13:44202193-44202013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
174, 59
               

               
Conread position:
               
176-365
               

               
Cow position:
               
chr13:47963997-47964180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
161, 31
               

               
Conread position:
               
176-365
               

               
Cow position:
               
chr13:54095010-54094825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
163, 67
               

               
Conread position:
               
176-368
               

               
Cow position:
               
chr13:21904866-21904675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
176-371
               

               
Cow position:
               
chr13:9125877-9125675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
176-371
               

               
Cow position:
               
chr13:21235481-21235676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
176-372
               

               
Cow position:
               
chr13:46458826-46458629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 110
               

               
Conread position:
               
176-373
               

               
Cow position:
               
chr13:11767838-11768034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
99, 153
               

               
Conread position:
               
176-374
               

               
Cow position:
               
chr13:21155285-21155489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 114
               

               
Conread position:
               
176-377
               

               
Cow position:
               
chr13:26383027-26383233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 171
               

               
Conread position:
               
176-378
               

               
Cow position:
               
chr13:6621394-6621587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
50, 114
               

               
Conread position:
               
176-385
               

               
Cow position:
               
chr13:6079215-6079422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
161, 110
               

               
Conread position:
               
176-385
               

               
Cow position:
               
chr13:6945577-6945363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
46, 115
               

               
Conread position:
               
176-385
               

               
Cow position:
               
chr13:55843688-55843474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 197
               

               
Conread position:
               
176-395
               

               
Cow position:
               
chr13:5091457-5091683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
176-395
               

               
Cow position:
               
chr13:6759586-6759810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
176-416
               

               
Cow position:
               
chr13:13504039-13504270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
176-475
               

               
Cow position:
               
chr13:12233253-12233540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
68, 111
               

               
Conread position:
               
176-504
               

               
Cow position:
               
chr13:15884809-15885139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
61, 185
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr13:25434925-25435243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
161, 51
               

               
Conread position:
               
176-519
               

               
Cow position:
               
chr13:28683563-28683231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
161, 84
               

               
Conread position:
               
176-521
               

               
Cow position:
               
chr13:52285020-52284684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
47, 141
               

               
Conread position:
               
176-524
               

               
Cow position:
               
chr13:8245128-8245468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 114
               

               
Conread position:
               
176-530
               

               
Cow position:
               
chr13:8609343-8609689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
176-537
               

               
Cow position:
               
chr13:50690188-50690548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
176-538
               

               
Cow position:
               
chr13:2414230-2413881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
161, 53
               

               
Conread position:
               
176-538
               

               
Cow position:
               
chr13:17800276-17799925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
160, 99
               

               
Conread position:
               
176-538
               

               
Cow position:
               
chr13:37382014-37381649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
50, 198
               

               
Conread position:
               
176-539
               

               
Cow position:
               
chr13:18172544-18172181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
61, 111
               

               
Conread position:
               
176-567
               

               
Cow position:
               
chr13:12408079-12408470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 116
               

               
Conread position:
               
176-567
               

               
Cow position:
               
chr13:59170861-59170469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
176-569
               

               
Cow position:
               
chr13:36877276-36876888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
155, 98
               

               
Conread position:
               
176-570
               

               
Cow position:
               
chr13:12875781-12876154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
176-570
               

               
Cow position:
               
chr13:21276059-21275678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 111
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr13:10988866-10989257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr13:15257174-15257552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
53, 109
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr13:15872653-15872254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr13:19223853-19223468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr13:30798925-30798527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
327, 43
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr13:34261436-34261052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr13:42200823-42200437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 100
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr13:44278558-44278161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr13:45023004-45023406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr13:57475213-57475600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
163, 13
               

               
Conread position:
               
177-371
               

               
Cow position:
               
chr13:5752220-5752417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
178-362
               

               
Cow position:
               
chr13:47502520-47502707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 155
               

               
Conread position:
               
178-374
               

               
Cow position:
               
chr13:5658528-5658721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
160, 72
               

               
Conread position:
               
178-395
               

               
Cow position:
               
chr13:19178478-19178258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
159, 203
               

               
Conread position:
               
178-507
               

               
Cow position:
               
chr13:10845795-10845485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
161, 107
               

               
Conread position:
               
178-511
               

               
Cow position:
               
chr13:57493981-57494312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
87, 173
               

               
Conread position:
               
178-532
               

               
Cow position:
               
chr13:11096374-11096038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
178-533
               

               
Cow position:
               
chr13:15281734-15282079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
178-537
               

               
Cow position:
               
chr13:19364446-19364091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
119, 110
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr13:311632-311249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
159, 107
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr13:26480012-26480389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr13:61976761-61977141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
179-347
               

               
Cow position:
               
chr13:60393498-60393669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 97
               

               
Conread position:
               
179-362
               

               
Cow position:
               
chr13:8838793-8838971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
179-370
               

               
Cow position:
               
chr13:4664661-4664858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 81
               

               
Conread position:
               
179-370
               

               
Cow position:
               
chr13:61990133-61990328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 70
               

               
Conread position:
               
179-417
               

               
Cow position:
               
chr13:20041760-20041999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
50, 139
               

               
Conread position:
               
179-480
               

               
Cow position:
               
chr13:11954912-11955209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
211, 52
               

               
Conread position:
               
179-502
               

               
Cow position:
               
chr13:38033883-38033563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
158, 109
               

               
Conread position:
               
179-526
               

               
Cow position:
               
chr13:547689-547357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
58, 43
               

               
Conread position:
               
179-533
               

               
Cow position:
               
chr13:15958822-15958471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
239, 57
               

               
Conread position:
               
179-539
               

               
Cow position:
               
chr13:56148742-56148370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
179-539
               

               
Cow position:
               
chr13:56160225-56160597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
179-567
               

               
Cow position:
               
chr13:47756575-47756184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
179-573
               

               
Cow position:
               
chr13:5169338-5168949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
148, 110
               

               
Conread position:
               
179-573
               

               
Cow position:
               
chr13:16247854-16247463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
157, 33
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr13:1170669-1170275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
243, 76
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr13:18170385-18170798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
157, 109
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr13:20893442-20893827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
249, 39
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr13:25817714-25817346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
160, 54
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr13:61188736-61188345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
180-361
               

               
Cow position:
               
chr13:37775027-37775204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
95, 127
               

               
Conread position:
               
180-374
               

               
Cow position:
               
chr13:46181989-46181797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
153, 89
               

               
Conread position:
               
180-379
               

               
Cow position:
               
chr13:57745899-57746101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
133, 184
               

               
Conread position:
               
180-385
               

               
Cow position:
               
chr13:37521180-37521386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
156, 95
               

               
Conread position:
               
180-507
               

               
Cow position:
               
chr13:15528828-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
180-532
               

               
Cow position:
               
chr13:52749288-52749614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
157, 16
               

               
Conread position:
               
180-575
               

               
Cow position:
               
chr13:20497852-20497459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
180-575
               

               
Cow position:
               
chr13:24230413-24230026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 181
               

               
Conread position:
               
181-494
               

               
Cow position:
               
chr13:23512558-23512264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
181-538
               

               
Cow position:
               
chr13:26369725-26369374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
156, 92
               

               
Conread position:
               
183-507
               

               
Cow position:
               
chr13:8652240-8652561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
183-575
               

               
Cow position:
               
chr13:24715439-24715066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
153, 62
               

               
Conread position:
               
185-570
               

               
Cow position:
               
chr13:48165234-48165602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
154, 49
               

               
Conread position:
               
188-365
               

               
Cow position:
               
chr13:5079033-5079208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
189-526
               

               
Cow position:
               
chr13:21283515-21283842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
189-567
               

               
Cow position:
               
chr13:15991031-15991406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 181
               

               
Conread position:
               
189-575
               

               
Cow position:
               
chr13:7032482-7032106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
190-573
               

               
Cow position:
               
chr13:15195019-15195382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
191-538
               

               
Cow position:
               
chr13:14771650-14771302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 177
               

               
Conread position:
               
192-337
               

               
Cow position:
               
chr13:22025521-22025664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
193-575
               

               
Cow position:
               
chr13:55583386-55583011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
195-575
               

               
Cow position:
               
chr13:47186409-47186047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
143, 80
               

               
Conread position:
               
196-376
               

               
Cow position:
               
chr13:50546036-50545852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
197-356
               

               
Cow position:
               
chr13:62474616-62474774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
197-539
               

               
Cow position:
               
chr13:11644116-11643788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
197-546
               

               
Cow position:
               
chr13:5082837-5082493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
197-575
               

               
Cow position:
               
chr13:49503345-49503721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
199-575
               

               
Cow position:
               
chr13:34375450-34375080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
200-531
               

               
Cow position:
               
chr13:19188484-19188158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 91
               

               
Conread position:
               
200-574
               

               
Cow position:
               
chr13:5758165-5758519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
201-575
               

               
Cow position:
               
chr13:17338613-17338242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
202-575
               

               
Cow position:
               
chr13:49022692-49023049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
202-575
               

               
Cow position:
               
chr13:49824205-49823840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
202-575
               

               
Cow position:
               
chr13:52055418-52055776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
35, 105
               

               
Conread position:
               
204-575
               

               
Cow position:
               
chr13:607085-607446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
22, 140
               

               
Conread position:
               
204-575
               

               
Cow position:
               
chr13:6441925-6442290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
205-567
               

               
Cow position:
               
chr13:14016390-14016738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
206-575
               

               
Cow position:
               
chr13:13954214-13954579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 153
               

               
Conread position:
               
207-538
               

               
Cow position:
               
chr13:4420520-4420180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
68, 159
               

               
Conread position:
               
208-533
               

               
Cow position:
               
chr13:9265662-9265971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
87, 5
               

               
Conread position:
               
210-417
               

               
Cow position:
               
chr13:7790184-7789978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
126, 75
               

               
Conread position:
               
211-362
               

               
Cow position:
               
chr13:29831265-29831420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
215-508
               

               
Cow position:
               
chr13:15903182-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
218-575
               

               
Cow position:
               
chr13:13339021-13338675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
65, 6
               

               
Conread position:
               
219-391
               

               
Cow position:
               
chr13:18942041-18941865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 162
               

               
Conread position:
               
219-503
               

               
Cow position:
               
chr13:15110480-15110199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
112, 5
               

               
Conread position:
               
219-563
               

               
Cow position:
               
chr13:25496166-25495832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
117, 5
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr13:54583037-54582691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
117, 5
               

               
Conread position:
               
220-531
               

               
Cow position:
               
chr13:27493691-27493999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
198, 32
               

               
Conread position:
               
220-575
               

               
Cow position:
               
chr13:17498391-17498035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
221-575
               

               
Cow position:
               
chr13:19581928-19582264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
222-499
               

               
Cow position:
               
chr13:62601163-62600896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 63
               

               
Conread position:
               
222-574
               

               
Cow position:
               
chr13:9900307-9899964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
116, 65
               

               
Conread position:
               
224-532
               

               
Cow position:
               
chr13:7488695-7488397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 99
               

               
Conread position:
               
224-551
               

               
Cow position:
               
chr13:30662160-30661842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
224-575
               

               
Cow position:
               
chr13:6849086-6848741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
59, 138
               

               
Conread position:
               
224-575
               

               
Cow position:
               
chr13:17158719-17159065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
115, 63
               

               
Conread position:
               
226-493
               

               
Cow position:
               
chr13:38698205-38697946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 34
               

               
Conread position:
               
227-573
               

               
Cow position:
               
chr13:26698344-26698678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
77, 64
               

               
Conread position:
               
227-575
               

               
Cow position:
               
chr13:5671439-5671769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
229-573
               

               
Cow position:
               
chr13:18999693-18999350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
231-511
               

               
Cow position:
               
chr13:8374623-8374896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
231-534
               

               
Cow position:
               
chr13:20580054-20579766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
232-575
               

               
Cow position:
               
chr13:2823007-2822684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
233-567
               

               
Cow position:
               
chr13:13251279-13251589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
175, 22
               

               
Conread position:
               
233-575
               

               
Cow position:
               
chr13:1363841-1363507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
233-575
               

               
Cow position:
               
chr13:18696989-18696640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
236-490
               

               
Cow position:
               
chr13:17966065-17966311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
192, 39
               

               
Conread position:
               
236-520
               

               
Cow position:
               
chr13:37946809-37947084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
237-484
               

               
Cow position:
               
chr13:52929852-52929615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
100, 84
               

               
Conread position:
               
237-524
               

               
Cow position:
               
chr13:8555606-8555329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
237-574
               

               
Cow position:
               
chr13:20360413-20360093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
237-575
               

               
Cow position:
               
chr13:28552739-28552403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
38, 138
               

               
Conread position:
               
237-575
               

               
Cow position:
               
chr13:39423963-39423641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
238-536
               

               
Cow position:
               
chr13:49520680-49520971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
238-575
               

               
Cow position:
               
chr13:3160533-3160219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
194, 53
               

               
Conread position:
               
238-575
               

               
Cow position:
               
chr13:18058107-18058430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 18
               

               
Conread position:
               
241-508
               

               
Cow position:
               
chr13:51115889-51116144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 44
               

               
Conread position:
               
244-575
               

               
Cow position:
               
chr13:21269444-21269764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 117
               

               
Conread position:
               
245-575
               

               
Cow position:
               
chr13:17437735-17438045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 6
               

               
Conread position:
               
249-573
               

               
Cow position:
               
chr13:18929662-18929344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
249-575
               

               
Cow position:
               
chr13:44003853-44003513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
250-574
               

               
Cow position:
               
chr13:39232702-39233009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
250-575
               

               
Cow position:
               
chr13:18846530-18846212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
101, 39
               

               
Conread position:
               
251-575
               

               
Cow position:
               
chr13:21280358-21280684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
251-575
               

               
Cow position:
               
chr13:25579058-25579377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
252-575
               

               
Cow position:
               
chr13:20217260-20217581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
253-570
               

               
Cow position:
               
chr13:18995256-18994944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
253-575
               

               
Cow position:
               
chr13:14576334-14576032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
256-573
               

               
Cow position:
               
chr13:39826677-39826372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
256-575
               

               
Cow position:
               
chr13:20288454-20288155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
257-573
               

               
Cow position:
               
chr13:5910773-5911074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
259-573
               

               
Cow position:
               
chr13:30258967-30258668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
263-506
               

               
Cow position:
               
chr13:15194615-15194853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
263-575
               

               
Cow position:
               
chr13:9924127-9924431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
263-575
               

               
Cow position:
               
chr13:21135783-21136095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
263-575
               

               
Cow position:
               
chr13:27550856-27550552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
269-575
               

               
Cow position:
               
chr13:49476199-49475888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
6, 89
               

               
Conread position:
               
270-575
               

               
Cow position:
               
chr13:14967105-14967398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
271-575
               

               
Cow position:
               
chr13:16714150-16714449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
277-575
               

               
Cow position:
               
chr13:620156-620431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
277-575
               

               
Cow position:
               
chr13:20331325-20331030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
278-575
               

               
Cow position:
               
chr13:54128489-54128781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
56, 80
               

               
Conread position:
               
279-573
               

               
Cow position:
               
chr13:7332897-7333195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
57, 88
               

               
Conread position:
               
279-574
               

               
Cow position:
               
chr13:8667716-8667433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
279-575
               

               
Cow position:
               
chr13:46329501-46329789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
280-546
               

               
Cow position:
               
chr13:55728002-55727744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
280-575
               

               
Cow position:
               
chr13:15659377-15659092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
281-540
               

               
Cow position:
               
chr13:3989304-3989052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
283-573
               

               
Cow position:
               
chr13:20137923-20137636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 102
               

               
Conread position:
               
287-573
               

               
Cow position:
               
chr13:28291420-28291139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
49, 81
               

               
Conread position:
               
288-556
               

               
Cow position:
               
chr13:50750960-50751224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
288-575
               

               
Cow position:
               
chr13:16203763-16203482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
288-575
               

               
Cow position:
               
chr13:25978097-25978377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
288-575
               

               
Cow position:
               
chr13:56034765-56035040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 66
               

               
Conread position:
               
290-575
               

               
Cow position:
               
chr13:21127243-21127525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 34
               

               
Conread position:
               
291-533
               

               
Cow position:
               
chr13:51901683-51901439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
297-571
               

               
Cow position:
               
chr13:26120278-26120542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
301-575
               

               
Cow position:
               
chr13:19279177-19278912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
302-575
               

               
Cow position:
               
chr13:17822871-17823133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
303-573
               

               
Cow position:
               
chr13:19778770-19779036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
306-575
               

               
Cow position:
               
chr13:35557029-35557294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
312-572
               

               
Cow position:
               
chr13:19876258-19876517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
6, 53
               

               
Conread position:
               
312-575
               

               
Cow position:
               
chr13:42672352-42672613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
313-573
               

               
Cow position:
               
chr13:55162280-55162024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
313-575
               

               
Cow position:
               
chr13:6861251-6860992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
315-575
               

               
Cow position:
               
chr13:23215085-23214831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
318-575
               

               
Cow position:
               
chr13:62008176-62007924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
322-575
               

               
Cow position:
               
chr13:11103131-11103391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 45
               

               
Conread position:
               
322-575
               

               
Cow position:
               
chr13:18197547-18197791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
323-555
               

               
Cow position:
               
chr13:37503522-37503749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
325-573
               

               
Cow position:
               
chr13:31008767-31009008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
329-575
               

               
Cow position:
               
chr13:55494470-55494705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
333-560
               

               
Cow position:
               
chr13:20288700-20288480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 32
               

               
Conread position:
               
336-543
               

               
Cow position:
               
chr13:48554416-48554211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
336-575
               

               
Cow position:
               
chr13:6889794-6889555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
207, 39
               

               
Conread position:
               
336-575
               

               
Cow position:
               
chr13:19174649-19174878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
336-575
               

               
Cow position:
               
chr13:20115296-20115061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
337-542
               

               
Cow position:
               
chr13:52459440-52459634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
344-575
               

               
Cow position:
               
chr13:48409422-48409185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
350-573
               

               
Cow position:
               
chr13:11808612-11808398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 38
               

               
Conread position:
               
356-575
               

               
Cow position:
               
chr13:50457892-50457668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
357-570
               

               
Cow position:
               
chr13:51695998-51695786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
359-575
               

               
Cow position:
               
chr13:17611521-17611734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 164
               

               
Conread position:
               
363-567
               

               
Cow position:
               
chr13:37775181-37775381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 144
               

               
Conread position:
               
364-551
               

               
Cow position:
               
chr13:58045743-58045932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
364-570
               

               
Cow position:
               
chr13:33054352-33054551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
364-575
               

               
Cow position:
               
chr13:21171548-21171755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
364-575
               

               
Cow position:
               
chr13:49392919-49393136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
367-570
               

               
Cow position:
               
chr13:584853-585052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
369-570
               

               
Cow position:
               
chr13:26726584-26726788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 168
               

               
Conread position:
               
369-573
               

               
Cow position:
               
chr13:34873608-34873404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
369-575
               

               
Cow position:
               
chr13:2341005-2340793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
369-575
               

               
Cow position:
               
chr13:14940827-14940614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
370-575
               

               
Cow position:
               
chr13:6926535-6926329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
371-573
               

               
Cow position:
               
chr13:54353025-54353225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
375-567
               

               
Cow position:
               
chr13:57436378-57436570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
375-574
               

               
Cow position:
               
chr13:11933590-11933788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
375-575
               

               
Cow position:
               
chr13:11434562-11434760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
376-575
               

               
Cow position:
               
chr13:3149424-3149616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
376-575
               

               
Cow position:
               
chr13:43183262-43183061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
376-575
               

               
Cow position:
               
chr13:52640936-52641134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
377-570
               

               
Cow position:
               
chr13:41157416-41157219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
377-571
               

               
Cow position:
               
chr13:47675924-47676117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
187, 142
               

               
Conread position:
               
377-573
               

               
Cow position:
               
chr13:8202855-8203051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
377-573
               

               
Cow position:
               
chr13:15997045-15996853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr13:24215662-24215860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr13:27181052-27180854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-553
               

               
Cow position:
               
chr13:7440377-7440202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-570
               

               
Cow position:
               
chr13:3143258-3143067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 8
               

               
Conread position:
               
378-573
               

               
Cow position:
               
chr13:52934437-52934242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
132, 121
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr13:3961860-3961662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr13:61344847-61345045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
379-550
               

               
Cow position:
               
chr13:18615393-18615220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
379-573
               

               
Cow position:
               
chr13:18548714-18548519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
379-573
               

               
Cow position:
               
chr13:32017502-32017697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
379-575
               

               
Cow position:
               
chr13:61001851-61001659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
380-575
               

               
Cow position:
               
chr13:10727372-10727176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
381-575
               

               
Cow position:
               
chr13:49356042-49356232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
385-567
               

               
Cow position:
               
chr13:12923877-12923699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
385-575
               

               
Cow position:
               
chr13:30315510-30315317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
385-575
               

               
Cow position:
               
chr13:45593921-45593740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
385-575
               

               
Cow position:
               
chr13:55081145-55080955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
174, 117
               

               
Conread position:
               
388-575
               

               
Cow position:
               
chr13:25941263-25941449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
388-575
               

               
Cow position:
               
chr13:28536322-28536504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
394-558
               

               
Cow position:
               
chr13:48222554-48222718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-575
               

               
Cow position:
               
chr13:5447549-5447368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
154, 70
               

               
Conread position:
               
395-541
               

               
Cow position:
               
chr13:50768589-50768446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
395-543
               

               
Cow position:
               
chr13:17464596-17464447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
139, 51
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr13:53850815-53850637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
398-570
               

               
Cow position:
               
chr13:4790127-4790301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
398-575
               

               
Cow position:
               
chr13:22122703-22122526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
398-575
               

               
Cow position:
               
chr13:24160443-24160266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
399-567
               

               
Cow position:
               
chr13:30148574-30148736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
400-575
               

               
Cow position:
               
chr13:26959811-26959981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
403-575
               

               
Cow position:
               
chr13:9124909-9124745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
405-575
               

               
Cow position:
               
chr13:1791443-1791613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
409-567
               

               
Cow position:
               
chr13:17716535-17716693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
409-575
               

               
Cow position:
               
chr13:13316665-13316499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
409-575
               

               
Cow position:
               
chr13:33854705-33854867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
413-575
               

               
Cow position:
               
chr13:28605417-28605578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
418-575
               

               
Cow position:
               
chr13:40483012-40483163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
421-573
               

               
Cow position:
               
chr13:16163547-16163405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
421-575
               

               
Cow position:
               
chr13:8537789-8537635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
421-575
               

               
Cow position:
               
chr13:25520948-25521107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
428-575
               

               
Cow position:
               
chr13:20520274-20520127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
436-567
               

               
Cow position:
               
chr13:48370347-48370479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr13:6113574-6113715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr13:14351534-14351396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr13:16476809-16476670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr13:26316934-26317074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr13:28376608-28376745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr13:48127060-48126921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
438-574
               

               
Cow position:
               
chr13:15162682-15162818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
439-573
               

               
Cow position:
               
chr13:11147006-11146872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
439-573
               

               
Cow position:
               
chr13:23399715-23399585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
439-575
               

               
Cow position:
               
chr13:13932222-13932358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
439-575
               

               
Cow position:
               
chr13:26377467-26377604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
40, 63
               

               
Conread position:
               
439-575
               

               
Cow position:
               
chr13:43576963-43576827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
444-570
               

               
Cow position:
               
chr13:6972327-6972202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
444-570
               

               
Cow position:
               
chr13:21955121-21955248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
444-574
               

               
Cow position:
               
chr13:56019050-56019179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
444-575
               

               
Cow position:
               
chr13:19588816-19588685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
444-575
               

               
Cow position:
               
chr13:22729458-22729589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
445-575
               

               
Cow position:
               
chr13:21246766-21246896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
446-575
               

               
Cow position:
               
chr13:3153692-3153564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
447-574
               

               
Cow position:
               
chr13:23805076-23805203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
451-575
               

               
Cow position:
               
chr13:8682392-8682268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.