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Cow genome map

           
Conread name:
           
rcmu27_f11.y1
        

               
Conread position:
               
97-320
               

               
Cow position:
               
chr2:47138541-47138765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
119-374
               

               
Cow position:
               
chr2:78744428-78744685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
119-568
               

               
Cow position:
               
chr2:21002908-21003337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
5, 128
               

               
Conread position:
               
120-358
               

               
Cow position:
               
chr2:47098205-47097970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 10
               

               
Conread position:
               
122-539
               

               
Cow position:
               
chr2:44482916-44482518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
135-573
               

               
Cow position:
               
chr2:54654876-54654446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
142-526
               

               
Cow position:
               
chr2:44229943-44229572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
144-496
               

               
Cow position:
               
chr2:42226518-42226168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
145-575
               

               
Cow position:
               
chr2:46204260-46204689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
146-567
               

               
Cow position:
               
chr2:32264643-32264228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
147-273
               

               
Cow position:
               
chr2:26318385-26318510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-327
               

               
Cow position:
               
chr2:20856069-20855896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-337
               

               
Cow position:
               
chr2:42872021-42872212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
89, 29
               

               
Conread position:
               
147-337
               

               
Cow position:
               
chr2:46734211-46734398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
147-358
               

               
Cow position:
               
chr2:8295588-8295788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
192, 27
               

               
Conread position:
               
147-361
               

               
Cow position:
               
chr2:62978911-62978704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
184, 27
               

               
Conread position:
               
147-362
               

               
Cow position:
               
chr2:80797429-80797638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
147-373
               

               
Cow position:
               
chr2:71495142-71495369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
147-374
               

               
Cow position:
               
chr2:73466760-73466542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
147-417
               

               
Cow position:
               
chr2:45311373-45311104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-452
               

               
Cow position:
               
chr2:32114819-32115130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 27
               

               
Conread position:
               
147-452
               

               
Cow position:
               
chr2:69238027-69238329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
128, 29
               

               
Conread position:
               
147-491
               

               
Cow position:
               
chr2:18061876-18061539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
147-510
               

               
Cow position:
               
chr2:42384158-42384512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
147-514
               

               
Cow position:
               
chr2:68109989-68109629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
215, 27
               

               
Conread position:
               
147-530
               

               
Cow position:
               
chr2:32403209-32402842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
192, 27
               

               
Conread position:
               
147-532
               

               
Cow position:
               
chr2:27358796-27359175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
67, 79
               

               
Conread position:
               
147-532
               

               
Cow position:
               
chr2:42192198-42192567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
147-533
               

               
Cow position:
               
chr2:44081203-44081568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
147-534
               

               
Cow position:
               
chr2:41184820-41185192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
284, 27
               

               
Conread position:
               
147-538
               

               
Cow position:
               
chr2:68488255-68487870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
147-546
               

               
Cow position:
               
chr2:40403267-40402884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
161, 27
               

               
Conread position:
               
147-548
               

               
Cow position:
               
chr2:76110149-76110543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
147-549
               

               
Cow position:
               
chr2:26438971-26438580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
147-567
               

               
Cow position:
               
chr2:32048242-32048646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
147-570
               

               
Cow position:
               
chr2:38886899-38886480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
147-570
               

               
Cow position:
               
chr2:84480766-84480335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
147-573
               

               
Cow position:
               
chr2:38662922-38662528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
147-573
               

               
Cow position:
               
chr2:43473944-43474348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:13369415-13369827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 96
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:13579997-13580404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:14826039-14826449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:21383103-21382679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:36056043-36055610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
183, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:41248322-41248735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:43994688-43995103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:45499443-45499033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:45575242-45574839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:47402959-47403381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
173, 29
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:74353649-74354073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:76561866-76562292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
347, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr2:82581177-82580766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 27
               

               
Conread position:
               
148-365
               

               
Cow position:
               
chr2:26555832-26555615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
148-575
               

               
Cow position:
               
chr2:6038759-6039185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 26
               

               
Conread position:
               
155-324
               

               
Cow position:
               
chr2:35882571-35882397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
155-361
               

               
Cow position:
               
chr2:4223507-4223293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
155-417
               

               
Cow position:
               
chr2:36007818-36007571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
181, 13
               

               
Conread position:
               
155-505
               

               
Cow position:
               
chr2:47808491-47808837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
183, 19
               

               
Conread position:
               
155-533
               

               
Cow position:
               
chr2:69747859-69747485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
155-567
               

               
Cow position:
               
chr2:1303710-1304114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
156-358
               

               
Cow position:
               
chr2:41057743-41057549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
181, 77
               

               
Conread position:
               
157-348
               

               
Cow position:
               
chr2:56002778-56002969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
158-508
               

               
Cow position:
               
chr2:50277785-50278128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
160-371
               

               
Cow position:
               
chr2:46111614-46111396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
160-373
               

               
Cow position:
               
chr2:49249055-49248842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
176, 89
               

               
Conread position:
               
160-575
               

               
Cow position:
               
chr2:54700213-54700627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
160-575
               

               
Cow position:
               
chr2:56351153-56350742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 148
               

               
Conread position:
               
160-575
               

               
Cow position:
               
chr2:80242425-80242014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
161-350
               

               
Cow position:
               
chr2:81233574-81233372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
161-351
               

               
Cow position:
               
chr2:6232385-6232568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
161-392
               

               
Cow position:
               
chr2:19597560-19597794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 117
               

               
Conread position:
               
161-455
               

               
Cow position:
               
chr2:1755801-1756094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
161-569
               

               
Cow position:
               
chr2:13001575-13001960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
177, 74
               

               
Conread position:
               
162-406
               

               
Cow position:
               
chr2:55877164-55877392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
174, 70
               

               
Conread position:
               
162-508
               

               
Cow position:
               
chr2:39263256-39263593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
110, 73
               

               
Conread position:
               
162-524
               

               
Cow position:
               
chr2:46375161-46374821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
162-526
               

               
Cow position:
               
chr2:66480414-66480060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
162-569
               

               
Cow position:
               
chr2:54970952-54971340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
175, 70
               

               
Conread position:
               
162-573
               

               
Cow position:
               
chr2:27178422-27178815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
162-575
               

               
Cow position:
               
chr2:41147641-41148043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
162-575
               

               
Cow position:
               
chr2:45784500-45784922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
146, 12
               

               
Conread position:
               
163-334
               

               
Cow position:
               
chr2:39068075-39068244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr2:25283579-25283777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
163-355
               

               
Cow position:
               
chr2:25285323-25285521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
163-356
               

               
Cow position:
               
chr2:13543795-13543988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
163-358
               

               
Cow position:
               
chr2:6282244-6282051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
163-361
               

               
Cow position:
               
chr2:47008574-47008372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
163-364
               

               
Cow position:
               
chr2:78116573-78116375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
173, 14
               

               
Conread position:
               
163-374
               

               
Cow position:
               
chr2:69770273-69770486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 11
               

               
Conread position:
               
163-406
               

               
Cow position:
               
chr2:46994985-46994752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
163-509
               

               
Cow position:
               
chr2:70945171-70945512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
163-526
               

               
Cow position:
               
chr2:47644820-47645170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
163-533
               

               
Cow position:
               
chr2:41954646-41955016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
163-533
               

               
Cow position:
               
chr2:85281343-85280994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
327, 21
               

               
Conread position:
               
163-534
               

               
Cow position:
               
chr2:77212412-77212050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
163-537
               

               
Cow position:
               
chr2:46294268-46293916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
163-538
               

               
Cow position:
               
chr2:67479749-67480111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
163-546
               

               
Cow position:
               
chr2:16514559-16514920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
163-546
               

               
Cow position:
               
chr2:46909668-46909292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
163-550
               

               
Cow position:
               
chr2:56846522-56846895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
163-567
               

               
Cow position:
               
chr2:32431951-32431576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
347, 11
               

               
Conread position:
               
163-567
               

               
Cow position:
               
chr2:46189322-46188935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 11
               

               
Conread position:
               
163-569
               

               
Cow position:
               
chr2:6539469-6539056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
163-573
               

               
Cow position:
               
chr2:34492210-34492624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
163-573
               

               
Cow position:
               
chr2:49428158-49428552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 11
               

               
Conread position:
               
163-573
               

               
Cow position:
               
chr2:53649793-53650186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
85, 119
               

               
Conread position:
               
163-574
               

               
Cow position:
               
chr2:58074579-58074177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr2:2673291-2673700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr2:17940518-17940115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr2:36077114-36077530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr2:37347568-37347954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
6, 68
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr2:41088360-41087936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
61, 137
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr2:44167849-44168233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr2:76314089-76313696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
165-319
               

               
Cow position:
               
chr2:85739899-85740044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
165-320
               

               
Cow position:
               
chr2:15694002-15694149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
165-337
               

               
Cow position:
               
chr2:29717065-29716886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-362
               

               
Cow position:
               
chr2:20940211-20940408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
165-362
               

               
Cow position:
               
chr2:51638319-51638525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
67, 9
               

               
Conread position:
               
165-392
               

               
Cow position:
               
chr2:55526989-55526761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-459
               

               
Cow position:
               
chr2:61974567-61974854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
165-508
               

               
Cow position:
               
chr2:14089551-14089899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
165-508
               

               
Cow position:
               
chr2:30816728-30817074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-508
               

               
Cow position:
               
chr2:61485407-61485729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
165-542
               

               
Cow position:
               
chr2:19287305-19286940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
345, 9
               

               
Conread position:
               
165-566
               

               
Cow position:
               
chr2:46262216-46262601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-568
               

               
Cow position:
               
chr2:52485209-52484798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-570
               

               
Cow position:
               
chr2:46357617-46357997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
351, 9
               

               
Conread position:
               
165-573
               

               
Cow position:
               
chr2:20947144-20947536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr2:13582355-13582754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr2:31750197-31749797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr2:33402717-33402316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr2:38795991-38795602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 167
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr2:67301808-67302188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
168-371
               

               
Cow position:
               
chr2:60463041-60462842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 8
               

               
Conread position:
               
168-371
               

               
Cow position:
               
chr2:60468420-60468221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
169, 8
               

               
Conread position:
               
168-523
               

               
Cow position:
               
chr2:28303100-28303440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 68
               

               
Conread position:
               
169-337
               

               
Cow position:
               
chr2:24722666-24722505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
169-512
               

               
Cow position:
               
chr2:17444570-17444908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
250, 5
               

               
Conread position:
               
169-570
               

               
Cow position:
               
chr2:46051529-46051143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
169-573
               

               
Cow position:
               
chr2:19493989-19494382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 5
               

               
Conread position:
               
171-338
               

               
Cow position:
               
chr2:4273488-4273327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
171-369
               

               
Cow position:
               
chr2:62644377-62644565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
166, 29
               

               
Conread position:
               
171-370
               

               
Cow position:
               
chr2:85930235-85930436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
61, 109
               

               
Conread position:
               
171-416
               

               
Cow position:
               
chr2:47119402-47119653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
171-575
               

               
Cow position:
               
chr2:80115881-80116267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 73
               

               
Conread position:
               
172-317
               

               
Cow position:
               
chr2:72541446-72541299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
172-507
               

               
Cow position:
               
chr2:20933574-20933919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
132, 57
               

               
Conread position:
               
173-350
               

               
Cow position:
               
chr2:16692935-16693112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
102, 131
               

               
Conread position:
               
173-365
               

               
Cow position:
               
chr2:28319073-28318882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
173-382
               

               
Cow position:
               
chr2:12979243-12979022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr2:50777554-50777787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
173-543
               

               
Cow position:
               
chr2:425597-425954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 54
               

               
Conread position:
               
173-568
               

               
Cow position:
               
chr2:37009197-37009569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
173-570
               

               
Cow position:
               
chr2:15597691-15597313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 37
               

               
Conread position:
               
173-575
               

               
Cow position:
               
chr2:50565705-50566107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 141
               

               
Conread position:
               
174-300
               

               
Cow position:
               
chr2:78750318-78750445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-307
               

               
Cow position:
               
chr2:39663175-39663312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
174-310
               

               
Cow position:
               
chr2:62571129-62571270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
174-319
               

               
Cow position:
               
chr2:41710659-41710799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
174-336
               

               
Cow position:
               
chr2:11840210-11840373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
58, 93
               

               
Conread position:
               
174-336
               

               
Cow position:
               
chr2:53574887-53575044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr2:14884064-14884225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr2:37072593-37072759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr2:47105151-47104978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
174-338
               

               
Cow position:
               
chr2:1203461-1203627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
174-347
               

               
Cow position:
               
chr2:68084294-68084468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
174-349
               

               
Cow position:
               
chr2:70746577-70746754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
174-349
               

               
Cow position:
               
chr2:73985241-73985060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
174-351
               

               
Cow position:
               
chr2:36630749-36630931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
174-352
               

               
Cow position:
               
chr2:1365111-1364926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
174-352
               

               
Cow position:
               
chr2:79403880-79404061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
174-355
               

               
Cow position:
               
chr2:36318603-36318415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
174-356
               

               
Cow position:
               
chr2:15571747-15571567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-356
               

               
Cow position:
               
chr2:24668936-24669130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-356
               

               
Cow position:
               
chr2:41949803-41949992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
174-357
               

               
Cow position:
               
chr2:11806098-11806287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr2:12237459-12237276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr2:50580148-50580339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
174-359
               

               
Cow position:
               
chr2:28637503-28637321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
174-361
               

               
Cow position:
               
chr2:11616879-11617065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
165, 36
               

               
Conread position:
               
174-361
               

               
Cow position:
               
chr2:24271006-24271201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
174-361
               

               
Cow position:
               
chr2:32408703-32408525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr2:333296-333124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
174-364
               

               
Cow position:
               
chr2:11599220-11599407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
148, 61
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr2:6884007-6884196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
163, 11
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr2:24709564-24709370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr2:39941266-39941461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr2:55960828-55960638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
174-366
               

               
Cow position:
               
chr2:485398-485590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
174-369
               

               
Cow position:
               
chr2:11900210-11900405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-370
               

               
Cow position:
               
chr2:23493313-23493516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-370
               

               
Cow position:
               
chr2:27600765-27600566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
174-370
               

               
Cow position:
               
chr2:46171095-46170900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
148, 95
               

               
Conread position:
               
174-373
               

               
Cow position:
               
chr2:45391747-45391537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
68, 198
               

               
Conread position:
               
174-374
               

               
Cow position:
               
chr2:13342200-13341999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
55, 134
               

               
Conread position:
               
174-374
               

               
Cow position:
               
chr2:21356074-21355868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-374
               

               
Cow position:
               
chr2:27076496-27076691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
163, 101
               

               
Conread position:
               
174-374
               

               
Cow position:
               
chr2:46020685-46020886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
174-376
               

               
Cow position:
               
chr2:46194575-46194778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
165, 97
               

               
Conread position:
               
174-377
               

               
Cow position:
               
chr2:45554097-45554298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
163, 61
               

               
Conread position:
               
174-378
               

               
Cow position:
               
chr2:25964705-25964506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
162, 81
               

               
Conread position:
               
174-378
               

               
Cow position:
               
chr2:64473855-64473654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
163, 73
               

               
Conread position:
               
174-382
               

               
Cow position:
               
chr2:21284719-21284922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
165, 48
               

               
Conread position:
               
174-384
               

               
Cow position:
               
chr2:45469784-45469998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
174-385
               

               
Cow position:
               
chr2:58248085-58247879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
112, 45
               

               
Conread position:
               
174-386
               

               
Cow position:
               
chr2:41525942-41525735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
174-391
               

               
Cow position:
               
chr2:306068-305852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
165, 114
               

               
Conread position:
               
174-391
               

               
Cow position:
               
chr2:1134614-1134391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
174-391
               

               
Cow position:
               
chr2:85246551-85246335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
143, 194
               

               
Conread position:
               
174-395
               

               
Cow position:
               
chr2:42938521-42938298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
174-402
               

               
Cow position:
               
chr2:12185806-12186028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
139, 7
               

               
Conread position:
               
174-403
               

               
Cow position:
               
chr2:74031208-74030985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
174-406
               

               
Cow position:
               
chr2:51824707-51824929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
163, 73
               

               
Conread position:
               
174-406
               

               
Cow position:
               
chr2:66615139-66614904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
51, 202
               

               
Conread position:
               
174-413
               

               
Cow position:
               
chr2:46245658-46245422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
174-415
               

               
Cow position:
               
chr2:52386141-52385903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
50, 183
               

               
Conread position:
               
174-415
               

               
Cow position:
               
chr2:65604148-65603908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
107, 127
               

               
Conread position:
               
174-416
               

               
Cow position:
               
chr2:24469877-24469643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
170, 69
               

               
Conread position:
               
174-416
               

               
Cow position:
               
chr2:56102690-56102440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
174-416
               

               
Cow position:
               
chr2:62685416-62685655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
157, 101
               

               
Conread position:
               
174-416
               

               
Cow position:
               
chr2:68716889-68716654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
162, 101
               

               
Conread position:
               
174-416
               

               
Cow position:
               
chr2:80839350-80839114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
205, 10
               

               
Conread position:
               
174-417
               

               
Cow position:
               
chr2:13467478-13467714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
174-417
               

               
Cow position:
               
chr2:22125517-22125265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 206
               

               
Conread position:
               
174-417
               

               
Cow position:
               
chr2:46184494-46184250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 187
               

               
Conread position:
               
174-429
               

               
Cow position:
               
chr2:15568405-15568154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
174-429
               

               
Cow position:
               
chr2:43578017-43577770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
174-437
               

               
Cow position:
               
chr2:57393518-57393260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
174-440
               

               
Cow position:
               
chr2:38628687-38628947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
162, 101
               

               
Conread position:
               
174-449
               

               
Cow position:
               
chr2:28118281-28118548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
163, 73
               

               
Conread position:
               
174-455
               

               
Cow position:
               
chr2:45880987-45880723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
174-462
               

               
Cow position:
               
chr2:34695021-34695305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
159, 101
               

               
Conread position:
               
174-462
               

               
Cow position:
               
chr2:39662478-39662765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 104
               

               
Conread position:
               
174-463
               

               
Cow position:
               
chr2:34535378-34535096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
46, 90
               

               
Conread position:
               
174-463
               

               
Cow position:
               
chr2:36878438-36878157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
174-469
               

               
Cow position:
               
chr2:45259297-45258994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
139, 62
               

               
Conread position:
               
174-480
               

               
Cow position:
               
chr2:29268841-29269150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
163, 70
               

               
Conread position:
               
174-486
               

               
Cow position:
               
chr2:21958-21653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
12, 51
               

               
Conread position:
               
174-487
               

               
Cow position:
               
chr2:1658279-1658594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
165, 45
               

               
Conread position:
               
174-488
               

               
Cow position:
               
chr2:9173480-9173186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr2:48864201-48863904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
174-492
               

               
Cow position:
               
chr2:5297519-5297827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
174-495
               

               
Cow position:
               
chr2:52344541-52344844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
174-498
               

               
Cow position:
               
chr2:988470-988784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr2:69223452-69223120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 191
               

               
Conread position:
               
174-503
               

               
Cow position:
               
chr2:33262834-33262515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
174-508
               

               
Cow position:
               
chr2:18858354-18858039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
174-508
               

               
Cow position:
               
chr2:36105050-36105376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
162, 62
               

               
Conread position:
               
174-508
               

               
Cow position:
               
chr2:46330836-46331171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
53, 114
               

               
Conread position:
               
174-508
               

               
Cow position:
               
chr2:48361347-48361678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
174-508
               

               
Cow position:
               
chr2:75600491-75600829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 193
               

               
Conread position:
               
174-510
               

               
Cow position:
               
chr2:36435981-36436314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
174-511
               

               
Cow position:
               
chr2:53533027-53532703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
254, 63
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr2:47116133-47115809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
165, 54
               

               
Conread position:
               
174-515
               

               
Cow position:
               
chr2:66217760-66217431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 147
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr2:32417077-32416742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr2:43123099-43123457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 198
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr2:46230987-46230645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 194
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr2:46244246-46243906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
51, 187
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr2:47072972-47073305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
174-523
               

               
Cow position:
               
chr2:15674326-15674663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
163, 112
               

               
Conread position:
               
174-523
               

               
Cow position:
               
chr2:82262599-82262254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 156
               

               
Conread position:
               
174-524
               

               
Cow position:
               
chr2:23271149-23270811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
174-525
               

               
Cow position:
               
chr2:39078154-39078501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
55, 134
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr2:25597710-25597373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
165, 61
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr2:28257254-28257585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr2:35092909-35092577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr2:42927671-42927327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
174-528
               

               
Cow position:
               
chr2:80963865-80963523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 54
               

               
Conread position:
               
174-530
               

               
Cow position:
               
chr2:61136509-61136859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
174-531
               

               
Cow position:
               
chr2:72183710-72183362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr2:18621186-18621545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr2:39584230-39584579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 108
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr2:45936175-45935835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
164, 42
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr2:70674512-70674856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 69
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr2:81388470-81388820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr2:17967253-17966897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr2:42183148-42183504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr2:46379307-46378972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr2:70704031-70704390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
174-535
               

               
Cow position:
               
chr2:45912859-45912499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
29, 61
               

               
Conread position:
               
174-537
               

               
Cow position:
               
chr2:28711207-28710869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr2:24434510-24434144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 125
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr2:30642890-30642527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 153
               

               
Conread position:
               
174-539
               

               
Cow position:
               
chr2:9687796-9687433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
174-539
               

               
Cow position:
               
chr2:15249963-15250315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 61
               

               
Conread position:
               
174-539
               

               
Cow position:
               
chr2:38362592-38362229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
174-539
               

               
Cow position:
               
chr2:39815507-39815148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
174-539
               

               
Cow position:
               
chr2:74260238-74260595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
164, 35
               

               
Conread position:
               
174-546
               

               
Cow position:
               
chr2:7524361-7523986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 198
               

               
Conread position:
               
174-546
               

               
Cow position:
               
chr2:64533122-64533476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
174-551
               

               
Cow position:
               
chr2:20980180-20980533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
174-552
               

               
Cow position:
               
chr2:57776128-57776497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 169
               

               
Conread position:
               
174-553
               

               
Cow position:
               
chr2:192681-192319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
53, 18
               

               
Conread position:
               
174-553
               

               
Cow position:
               
chr2:55632555-55632926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
174-558
               

               
Cow position:
               
chr2:31499781-31500157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
174-566
               

               
Cow position:
               
chr2:53430506-53430879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr2:20900688-20900298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 191
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr2:27173147-27173524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
174-568
               

               
Cow position:
               
chr2:46033111-46033499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
174-569
               

               
Cow position:
               
chr2:33554379-33554013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
174-569
               

               
Cow position:
               
chr2:62744228-62743846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr2:5300367-5300763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 154
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr2:6356607-6356200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr2:15329182-15329538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
165, 73
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr2:17114956-17114575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr2:42255213-42255595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr2:65931750-65932132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
174-571
               

               
Cow position:
               
chr2:1210988-1210602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 195
               

               
Conread position:
               
174-571
               

               
Cow position:
               
chr2:6697713-6697334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
163, 75
               

               
Conread position:
               
174-571
               

               
Cow position:
               
chr2:39500811-39501202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
172, 61
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr2:13354455-13354848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 101
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr2:19212264-19211893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr2:38272374-38271980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr2:44170336-44170725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr2:46745702-46746102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr2:55278820-55278417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 147
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr2:67596232-67595849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 76
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr2:971623-971990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr2:14710326-14709958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
165, 75
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr2:15063487-15063099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:840939-841326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 160
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:7193982-7194378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 269
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:7533993-7533611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:9063050-9063437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:9767650-9767261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:12950384-12949994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
188, 14
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:13684485-13684860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 85
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:15059288-15058892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:15298325-15298704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:16422333-16422738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:16428621-16428232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:16594387-16594774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:16632716-16633103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
55, 100
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:21644673-21644280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
51, 134
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:24393909-24393525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
53, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:25282887-25283283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 193
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:26501160-26500769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
50, 163
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:29779753-29779366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 53
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:31355483-31355870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
53, 136
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:31673053-31673434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
63, 133
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:31783724-31784098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:33251294-33250918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
134, 29
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:33497424-33497031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 162
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:33532168-33531775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:38965400-38965782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:39280972-39281368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 134
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:41145090-41145488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:41452008-41452403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:43624747-43624370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
133, 101
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:43835784-43835390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:44065371-44065734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:45619615-45619227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
165, 104
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:46202047-46202437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:46227246-46227635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 97
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:49467397-49467802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:49608367-49608761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 158
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:50352644-50353058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
55, 215
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:52332850-52332464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:54790058-54790452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
58, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:56828788-56828391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:59179836-59180242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 135
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:59397279-59396881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 116
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:60470963-60471342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
101, 89
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:65269918-65269520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 187
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:65901796-65902195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 125
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:66404149-66403758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:68190857-68190474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
134, 50
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:68970513-68970915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:69250897-69250497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 194
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:69579901-69579506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:69581732-69581342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
55, 168
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:69676755-69676358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 190
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:71800311-71799911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
53, 150
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:71922005-71922393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:74249445-74249053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:76340879-76340478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 205
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:80275512-80275123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr2:84997095-84997482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
55, 166
               

               
Conread position:
               
175-296
               

               
Cow position:
               
chr2:58310475-58310598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
175-316
               

               
Cow position:
               
chr2:80177982-80177841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
175-334
               

               
Cow position:
               
chr2:60956154-60956311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
175-337
               

               
Cow position:
               
chr2:23712671-23712826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
175-361
               

               
Cow position:
               
chr2:64323031-64323211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
162, 58
               

               
Conread position:
               
175-361
               

               
Cow position:
               
chr2:76183026-76182846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
163, 53
               

               
Conread position:
               
175-362
               

               
Cow position:
               
chr2:55387329-55387512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
99, 78
               

               
Conread position:
               
175-366
               

               
Cow position:
               
chr2:61187342-61187155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
162, 68
               

               
Conread position:
               
175-370
               

               
Cow position:
               
chr2:40691268-40691466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 102
               

               
Conread position:
               
175-372
               

               
Cow position:
               
chr2:21407701-21407900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
130, 135
               

               
Conread position:
               
175-391
               

               
Cow position:
               
chr2:82937520-82937304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
161, 44
               

               
Conread position:
               
175-463
               

               
Cow position:
               
chr2:51594546-51594826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
162, 74
               

               
Conread position:
               
175-463
               

               
Cow position:
               
chr2:75561617-75561900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
175-494
               

               
Cow position:
               
chr2:45665812-45666125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
201, 100
               

               
Conread position:
               
175-503
               

               
Cow position:
               
chr2:80325068-80324743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
56, 86
               

               
Conread position:
               
175-524
               

               
Cow position:
               
chr2:39564134-39564475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
175-527
               

               
Cow position:
               
chr2:73353571-73353915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
75, 193
               

               
Conread position:
               
175-538
               

               
Cow position:
               
chr2:85339680-85339319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 102
               

               
Conread position:
               
175-567
               

               
Cow position:
               
chr2:37113418-37113035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
156, 58
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr2:80178-79791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr2:16513632-16514025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr2:35181177-35181567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr2:42800822-42801205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr2:57939463-57939856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 107
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr2:64212781-64212383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 104
               

               
Conread position:
               
176-293
               

               
Cow position:
               
chr2:65050815-65050934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
176-300
               

               
Cow position:
               
chr2:66097908-66097781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
176-320
               

               
Cow position:
               
chr2:39566897-39566750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 116
               

               
Conread position:
               
176-328
               

               
Cow position:
               
chr2:15216391-15216553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
176-337
               

               
Cow position:
               
chr2:8505599-8505759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 132
               

               
Conread position:
               
176-337
               

               
Cow position:
               
chr2:14349579-14349727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
176-337
               

               
Cow position:
               
chr2:28285748-28285588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 49
               

               
Conread position:
               
176-338
               

               
Cow position:
               
chr2:2688954-2689109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
176-354
               

               
Cow position:
               
chr2:32406465-32406642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 40
               

               
Conread position:
               
176-354
               

               
Cow position:
               
chr2:42599710-42599893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
49, 114
               

               
Conread position:
               
176-354
               

               
Cow position:
               
chr2:48617760-48617943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 106
               

               
Conread position:
               
176-357
               

               
Cow position:
               
chr2:47066797-47066615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
176-362
               

               
Cow position:
               
chr2:27613244-27613051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 114
               

               
Conread position:
               
176-362
               

               
Cow position:
               
chr2:50400202-50400394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 71
               

               
Conread position:
               
176-362
               

               
Cow position:
               
chr2:51799539-51799355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
161, 48
               

               
Conread position:
               
176-363
               

               
Cow position:
               
chr2:36997938-36998129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 127
               

               
Conread position:
               
176-369
               

               
Cow position:
               
chr2:46362605-46362804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 116
               

               
Conread position:
               
176-370
               

               
Cow position:
               
chr2:39385082-39384895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
165, 59
               

               
Conread position:
               
176-372
               

               
Cow position:
               
chr2:19154090-19154287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
176-375
               

               
Cow position:
               
chr2:47361740-47361538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
72, 103
               

               
Conread position:
               
176-376
               

               
Cow position:
               
chr2:25928235-25928435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
176-376
               

               
Cow position:
               
chr2:82648037-82647837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
161, 8
               

               
Conread position:
               
176-378
               

               
Cow position:
               
chr2:13726113-13725922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
52, 72
               

               
Conread position:
               
176-380
               

               
Cow position:
               
chr2:17341355-17341566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
176-383
               

               
Cow position:
               
chr2:15653528-15653321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
176-395
               

               
Cow position:
               
chr2:73069499-73069727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
176-416
               

               
Cow position:
               
chr2:14555969-14555734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
81, 111
               

               
Conread position:
               
176-416
               

               
Cow position:
               
chr2:39368596-39368839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
176-421
               

               
Cow position:
               
chr2:55480456-55480219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
176-429
               

               
Cow position:
               
chr2:71624597-71624362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
176-491
               

               
Cow position:
               
chr2:46344470-46344780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
160, 112
               

               
Conread position:
               
176-491
               

               
Cow position:
               
chr2:70663795-70664106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 110
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr2:13604247-13604575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr2:23848039-23847729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
161, 53
               

               
Conread position:
               
176-510
               

               
Cow position:
               
chr2:70895812-70896143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
98, 191
               

               
Conread position:
               
176-512
               

               
Cow position:
               
chr2:39489566-39489884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
176-519
               

               
Cow position:
               
chr2:26102562-26102884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
161, 112
               

               
Conread position:
               
176-526
               

               
Cow position:
               
chr2:53851214-53851560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
176-526
               

               
Cow position:
               
chr2:77241640-77241997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
90, 57
               

               
Conread position:
               
176-538
               

               
Cow position:
               
chr2:81927637-81927985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
161, 73
               

               
Conread position:
               
176-561
               

               
Cow position:
               
chr2:23120975-23120615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
176-561
               

               
Cow position:
               
chr2:67610001-67609610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
176-567
               

               
Cow position:
               
chr2:26806332-26805948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 108
               

               
Conread position:
               
176-567
               

               
Cow position:
               
chr2:36963315-36963687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
176-567
               

               
Cow position:
               
chr2:38259672-38259288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
163, 18
               

               
Conread position:
               
176-567
               

               
Cow position:
               
chr2:85925842-85926227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
187, 87
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr2:6160545-6160180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr2:10320172-10319780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr2:16839415-16839809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 109
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr2:22372165-22371785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 99
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr2:27337993-27337608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr2:44986544-44986156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr2:47047971-47047584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 112
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr2:66916942-66916543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 176
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr2:82957456-82957851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
177-370
               

               
Cow position:
               
chr2:48069619-48069419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
177-575
               

               
Cow position:
               
chr2:21380620-21380234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
177-575
               

               
Cow position:
               
chr2:42969887-42970276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
11, 144
               

               
Conread position:
               
177-575
               

               
Cow position:
               
chr2:45535252-45535635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 67
               

               
Conread position:
               
178-372
               

               
Cow position:
               
chr2:2590162-2589971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
159, 32
               

               
Conread position:
               
178-384
               

               
Cow position:
               
chr2:76822466-76822260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
115, 123
               

               
Conread position:
               
178-481
               

               
Cow position:
               
chr2:21416097-21416376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
159, 53
               

               
Conread position:
               
178-508
               

               
Cow position:
               
chr2:44551050-44550743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
178-508
               

               
Cow position:
               
chr2:81349101-81348771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
178-525
               

               
Cow position:
               
chr2:38658999-38658664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
160, 40
               

               
Conread position:
               
178-525
               

               
Cow position:
               
chr2:70539592-70539249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 163
               

               
Conread position:
               
178-531
               

               
Cow position:
               
chr2:47624614-47624278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr2:41157746-41158129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
15, 167
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr2:47090548-47090935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr2:71437600-71437207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
51, 112
               

               
Conread position:
               
179-320
               

               
Cow position:
               
chr2:44015838-44015982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
179-331
               

               
Cow position:
               
chr2:63051367-63051216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 130
               

               
Conread position:
               
179-351
               

               
Cow position:
               
chr2:73282774-73282598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
179-369
               

               
Cow position:
               
chr2:47189055-47189251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
179-372
               

               
Cow position:
               
chr2:49344499-49344690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
158, 33
               

               
Conread position:
               
179-494
               

               
Cow position:
               
chr2:6372216-6371905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 70
               

               
Conread position:
               
179-503
               

               
Cow position:
               
chr2:777911-777586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 197
               

               
Conread position:
               
179-525
               

               
Cow position:
               
chr2:56821613-56821258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
179-538
               

               
Cow position:
               
chr2:36017629-36017278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
74, 78
               

               
Conread position:
               
179-539
               

               
Cow position:
               
chr2:35483673-35483312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
179-557
               

               
Cow position:
               
chr2:43596386-43595995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 111
               

               
Conread position:
               
179-567
               

               
Cow position:
               
chr2:10737996-10737612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
158, 76
               

               
Conread position:
               
179-567
               

               
Cow position:
               
chr2:81791792-81791400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 181
               

               
Conread position:
               
179-571
               

               
Cow position:
               
chr2:37535205-37534828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
179-573
               

               
Cow position:
               
chr2:29343643-29343236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
50, 175
               

               
Conread position:
               
179-574
               

               
Cow position:
               
chr2:60923192-60922819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 188
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr2:29041667-29042067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr2:72527737-72528132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 182
               

               
Conread position:
               
180-337
               

               
Cow position:
               
chr2:26157927-26157770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
26, 151
               

               
Conread position:
               
180-467
               

               
Cow position:
               
chr2:39855574-39855857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 64
               

               
Conread position:
               
180-525
               

               
Cow position:
               
chr2:69823373-69823713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
180-531
               

               
Cow position:
               
chr2:63274163-63273816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
180-541
               

               
Cow position:
               
chr2:38273329-38273689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
180-552
               

               
Cow position:
               
chr2:64292914-64292577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
180-567
               

               
Cow position:
               
chr2:56937470-56937843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
180-575
               

               
Cow position:
               
chr2:59992453-59992079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
156, 66
               

               
Conread position:
               
180-575
               

               
Cow position:
               
chr2:78229605-78229980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 56
               

               
Conread position:
               
181-495
               

               
Cow position:
               
chr2:42936426-42936116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
181-498
               

               
Cow position:
               
chr2:9324779-9325095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
15, 109
               

               
Conread position:
               
181-508
               

               
Cow position:
               
chr2:44232668-44232347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
181-526
               

               
Cow position:
               
chr2:46949100-46948766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
181-570
               

               
Cow position:
               
chr2:19294388-19294757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 48
               

               
Conread position:
               
181-575
               

               
Cow position:
               
chr2:39513813-39514208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
182-567
               

               
Cow position:
               
chr2:80904139-80903751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
127, 104
               

               
Conread position:
               
182-573
               

               
Cow position:
               
chr2:28820152-28820539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
126, 21
               

               
Conread position:
               
183-369
               

               
Cow position:
               
chr2:16564472-16564664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
183-575
               

               
Cow position:
               
chr2:39362873-39362504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
183-575
               

               
Cow position:
               
chr2:75226988-75227372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
184-565
               

               
Cow position:
               
chr2:29159692-29160068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 132
               

               
Conread position:
               
184-575
               

               
Cow position:
               
chr2:44051093-44051478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 98
               

               
Conread position:
               
185-538
               

               
Cow position:
               
chr2:44191269-44191615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
186-328
               

               
Cow position:
               
chr2:23301539-23301683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
187-575
               

               
Cow position:
               
chr2:41185264-41185629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
188-575
               

               
Cow position:
               
chr2:73637383-73637000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
190-575
               

               
Cow position:
               
chr2:12802871-12802502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
251, 65
               

               
Conread position:
               
190-575
               

               
Cow position:
               
chr2:20791631-20791253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
190-575
               

               
Cow position:
               
chr2:46120841-46120475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
191-471
               

               
Cow position:
               
chr2:82019326-82019058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
191-565
               

               
Cow position:
               
chr2:24007221-24007578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
145, 75
               

               
Conread position:
               
191-573
               

               
Cow position:
               
chr2:40484724-40484339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
142, 93
               

               
Conread position:
               
192-494
               

               
Cow position:
               
chr2:42130229-42129937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
192-575
               

               
Cow position:
               
chr2:71622254-71621879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
193-415
               

               
Cow position:
               
chr2:46353695-46353473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
144, 82
               

               
Conread position:
               
193-484
               

               
Cow position:
               
chr2:4655301-4655016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
193-539
               

               
Cow position:
               
chr2:43735126-43735463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
193-568
               

               
Cow position:
               
chr2:43789904-43790263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
193-570
               

               
Cow position:
               
chr2:40488610-40488971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
193-574
               

               
Cow position:
               
chr2:41019418-41019048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
193-575
               

               
Cow position:
               
chr2:6304526-6304117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 166
               

               
Conread position:
               
194-526
               

               
Cow position:
               
chr2:14854115-14854428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
195-417
               

               
Cow position:
               
chr2:73222403-73222187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
149, 135
               

               
Conread position:
               
195-533
               

               
Cow position:
               
chr2:61421372-61421037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
80, 171
               

               
Conread position:
               
195-567
               

               
Cow position:
               
chr2:44931465-44931096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 93
               

               
Conread position:
               
195-575
               

               
Cow position:
               
chr2:13000723-13001085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
196-489
               

               
Cow position:
               
chr2:3309227-3308940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
196-520
               

               
Cow position:
               
chr2:45623818-45624132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
196-537
               

               
Cow position:
               
chr2:83183944-83184287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
196-538
               

               
Cow position:
               
chr2:1638400-1638740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 83
               

               
Conread position:
               
196-575
               

               
Cow position:
               
chr2:18997527-18997886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
197-358
               

               
Cow position:
               
chr2:37424304-37424133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 118
               

               
Conread position:
               
197-575
               

               
Cow position:
               
chr2:36575544-36575905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
139, 53
               

               
Conread position:
               
199-508
               

               
Cow position:
               
chr2:54789574-54789880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
200-363
               

               
Cow position:
               
chr2:17493517-17493346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
200-519
               

               
Cow position:
               
chr2:5130643-5130337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
286, 58
               

               
Conread position:
               
200-538
               

               
Cow position:
               
chr2:25757826-25757491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 144
               

               
Conread position:
               
201-365
               

               
Cow position:
               
chr2:47152732-47152561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
201-549
               

               
Cow position:
               
chr2:26850969-26851309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
202-567
               

               
Cow position:
               
chr2:29121694-29122046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
203-519
               

               
Cow position:
               
chr2:549517-549213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 21
               

               
Conread position:
               
203-570
               

               
Cow position:
               
chr2:65929033-65928675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
204-517
               

               
Cow position:
               
chr2:70495081-70495383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
33, 50
               

               
Conread position:
               
204-526
               

               
Cow position:
               
chr2:63332003-63331678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 75
               

               
Conread position:
               
205-514
               

               
Cow position:
               
chr2:17328560-17328863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
70, 45
               

               
Conread position:
               
205-569
               

               
Cow position:
               
chr2:1762600-1762955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
206-526
               

               
Cow position:
               
chr2:13709282-13709594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 83
               

               
Conread position:
               
211-575
               

               
Cow position:
               
chr2:34750167-34749821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
212-450
               

               
Cow position:
               
chr2:76122646-76122413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
212-575
               

               
Cow position:
               
chr2:6324056-6323686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
213-511
               

               
Cow position:
               
chr2:19328365-19328656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
216-573
               

               
Cow position:
               
chr2:12686965-12686626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 116
               

               
Conread position:
               
219-573
               

               
Cow position:
               
chr2:14218477-14218822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
120, 5
               

               
Conread position:
               
219-573
               

               
Cow position:
               
chr2:46942536-46942187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 70
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr2:46343313-46342980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr2:47064945-47065282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr2:78249562-78249909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
221-532
               

               
Cow position:
               
chr2:84970880-84970585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
214, 23
               

               
Conread position:
               
224-521
               

               
Cow position:
               
chr2:25448161-25448445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 17
               

               
Conread position:
               
224-573
               

               
Cow position:
               
chr2:72630261-72630621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 54
               

               
Conread position:
               
224-574
               

               
Cow position:
               
chr2:43960006-43960348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
181, 64
               

               
Conread position:
               
224-575
               

               
Cow position:
               
chr2:35664539-35664883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
289, 110
               

               
Conread position:
               
225-452
               

               
Cow position:
               
chr2:19594547-19594772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
225-538
               

               
Cow position:
               
chr2:70780927-70781227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
229-494
               

               
Cow position:
               
chr2:5998782-5999039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
110, 11
               

               
Conread position:
               
229-537
               

               
Cow position:
               
chr2:45565538-45565840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
229-573
               

               
Cow position:
               
chr2:51098257-51097914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
229-575
               

               
Cow position:
               
chr2:26170578-26170917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
231-573
               

               
Cow position:
               
chr2:65587002-65587324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
118, 56
               

               
Conread position:
               
232-370
               

               
Cow position:
               
chr2:45537597-45537456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
68, 43
               

               
Conread position:
               
232-511
               

               
Cow position:
               
chr2:47055746-47056016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
232-573
               

               
Cow position:
               
chr2:46130311-46129995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
126, 53
               

               
Conread position:
               
232-575
               

               
Cow position:
               
chr2:2930891-2931228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 108
               

               
Conread position:
               
237-517
               

               
Cow position:
               
chr2:38785760-38785477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
202, 26
               

               
Conread position:
               
237-531
               

               
Cow position:
               
chr2:24858844-24859141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 124
               

               
Conread position:
               
237-575
               

               
Cow position:
               
chr2:46119918-46119599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
237-575
               

               
Cow position:
               
chr2:46135057-46135395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
237-575
               

               
Cow position:
               
chr2:46242745-46242411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
238-575
               

               
Cow position:
               
chr2:41622327-41622654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
244-415
               

               
Cow position:
               
chr2:39058703-39058877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
244-563
               

               
Cow position:
               
chr2:69367281-69366954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
244-575
               

               
Cow position:
               
chr2:70660414-70660095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
245-575
               

               
Cow position:
               
chr2:13035966-13036293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 47
               

               
Conread position:
               
247-567
               

               
Cow position:
               
chr2:54967859-54968171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
247-575
               

               
Cow position:
               
chr2:2094453-2094785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
247-575
               

               
Cow position:
               
chr2:13856969-13856649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
247-575
               

               
Cow position:
               
chr2:37973469-37973154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
248-575
               

               
Cow position:
               
chr2:63201355-63201036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
249-573
               

               
Cow position:
               
chr2:32660029-32660348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
249-575
               

               
Cow position:
               
chr2:58153560-58153873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
250-533
               

               
Cow position:
               
chr2:12988434-12988715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
250-539
               

               
Cow position:
               
chr2:58135541-58135255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 116
               

               
Conread position:
               
250-575
               

               
Cow position:
               
chr2:67745109-67745419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
252-575
               

               
Cow position:
               
chr2:33472127-33471827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
252-575
               

               
Cow position:
               
chr2:46052365-46052670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
173, 31
               

               
Conread position:
               
253-534
               

               
Cow position:
               
chr2:54810995-54810724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
254-575
               

               
Cow position:
               
chr2:6267921-6267596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
255-537
               

               
Cow position:
               
chr2:43907324-43907054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
255-538
               

               
Cow position:
               
chr2:44025233-44025513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
255-575
               

               
Cow position:
               
chr2:19156324-19156016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 101
               

               
Conread position:
               
256-575
               

               
Cow position:
               
chr2:12682799-12682489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
263-575
               

               
Cow position:
               
chr2:16481993-16481688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
263-575
               

               
Cow position:
               
chr2:63182689-63183006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
264-575
               

               
Cow position:
               
chr2:80962118-80961792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
265-573
               

               
Cow position:
               
chr2:28726345-28726633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
194, 69
               

               
Conread position:
               
266-520
               

               
Cow position:
               
chr2:17410133-17409889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
268-539
               

               
Cow position:
               
chr2:83233763-83234031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
270-570
               

               
Cow position:
               
chr2:39228683-39228973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
273-539
               

               
Cow position:
               
chr2:44222699-44222957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 83
               

               
Conread position:
               
274-508
               

               
Cow position:
               
chr2:12051030-12051255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 91
               

               
Conread position:
               
277-570
               

               
Cow position:
               
chr2:79837829-79837558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
277-573
               

               
Cow position:
               
chr2:37791616-37791325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
278-575
               

               
Cow position:
               
chr2:56867417-56867135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
279-539
               

               
Cow position:
               
chr2:25967010-25966754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
279-553
               

               
Cow position:
               
chr2:48635161-48634896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
279-575
               

               
Cow position:
               
chr2:40597463-40597742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
280-516
               

               
Cow position:
               
chr2:62861472-62861702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
280-575
               

               
Cow position:
               
chr2:40411285-40411004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
282-549
               

               
Cow position:
               
chr2:3981781-3982034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
258, 48
               

               
Conread position:
               
285-560
               

               
Cow position:
               
chr2:14626471-14626759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 153
               

               
Conread position:
               
286-552
               

               
Cow position:
               
chr2:86510606-86510346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
286-573
               

               
Cow position:
               
chr2:10505735-10505444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
286-573
               

               
Cow position:
               
chr2:45642600-45642320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
53, 77
               

               
Conread position:
               
286-574
               

               
Cow position:
               
chr2:19500195-19499912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
286-575
               

               
Cow position:
               
chr2:19138003-19137721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
286-575
               

               
Cow position:
               
chr2:67927905-67927622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
50, 71
               

               
Conread position:
               
287-574
               

               
Cow position:
               
chr2:11656782-11657058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
287-575
               

               
Cow position:
               
chr2:40257526-40257247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
288-575
               

               
Cow position:
               
chr2:60616594-60616311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 81
               

               
Conread position:
               
288-575
               

               
Cow position:
               
chr2:71600310-71600597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 91
               

               
Conread position:
               
291-575
               

               
Cow position:
               
chr2:76762111-76762390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
292-520
               

               
Cow position:
               
chr2:46971015-46971242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
292-575
               

               
Cow position:
               
chr2:67386583-67386301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
294-550
               

               
Cow position:
               
chr2:13271522-13271271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
295-575
               

               
Cow position:
               
chr2:51181879-51181605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
299-575
               

               
Cow position:
               
chr2:68292675-68292941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
301-543
               

               
Cow position:
               
chr2:38969606-38969368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
309-531
               

               
Cow position:
               
chr2:38640234-38640452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 9
               

               
Conread position:
               
312-575
               

               
Cow position:
               
chr2:69350652-69350398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
313-575
               

               
Cow position:
               
chr2:39371337-39371583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
314-573
               

               
Cow position:
               
chr2:70847344-70847095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
314-575
               

               
Cow position:
               
chr2:73023625-73023877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
315-575
               

               
Cow position:
               
chr2:57733348-57733597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
318-575
               

               
Cow position:
               
chr2:15348313-15348566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 51
               

               
Conread position:
               
318-575
               

               
Cow position:
               
chr2:22677114-22677365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
318-575
               

               
Cow position:
               
chr2:43136529-43136272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
323-575
               

               
Cow position:
               
chr2:39750029-39750286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
331-575
               

               
Cow position:
               
chr2:12890850-12890611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
195, 29
               

               
Conread position:
               
336-567
               

               
Cow position:
               
chr2:8083533-8083761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
336-575
               

               
Cow position:
               
chr2:66237142-66237369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
338-572
               

               
Cow position:
               
chr2:7972216-7972451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
338-575
               

               
Cow position:
               
chr2:46161899-46162122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
339-539
               

               
Cow position:
               
chr2:13013035-13013226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
344-537
               

               
Cow position:
               
chr2:53575341-53575531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
358-531
               

               
Cow position:
               
chr2:50367925-50368100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
359-525
               

               
Cow position:
               
chr2:40466591-40466758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
359-534
               

               
Cow position:
               
chr2:994406-994233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
359-567
               

               
Cow position:
               
chr2:35988660-35988454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
359-575
               

               
Cow position:
               
chr2:13672481-13672685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 80
               

               
Conread position:
               
359-575
               

               
Cow position:
               
chr2:65830377-65830168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
359-575
               

               
Cow position:
               
chr2:66011339-66011555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 26
               

               
Conread position:
               
359-575
               

               
Cow position:
               
chr2:67952937-67953154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
360-575
               

               
Cow position:
               
chr2:1317926-1317712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
360-575
               

               
Cow position:
               
chr2:10628578-10628362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
360-575
               

               
Cow position:
               
chr2:21410175-21410399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
360-575
               

               
Cow position:
               
chr2:50905753-50905532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
362-575
               

               
Cow position:
               
chr2:15734375-15734589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
364-567
               

               
Cow position:
               
chr2:38272423-38272617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
364-575
               

               
Cow position:
               
chr2:54052276-54052061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
365-575
               

               
Cow position:
               
chr2:21074162-21073954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
365-575
               

               
Cow position:
               
chr2:61480554-61480761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
367-569
               

               
Cow position:
               
chr2:50449945-50449746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr2:1422317-1422521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr2:1923928-1923712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr2:42979019-42978807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr2:45596948-45597148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
368-575
               

               
Cow position:
               
chr2:8843866-8843654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
369-569
               

               
Cow position:
               
chr2:85795000-85794805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
369-575
               

               
Cow position:
               
chr2:38953790-38954003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
370-544
               

               
Cow position:
               
chr2:19394520-19394694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
370-575
               

               
Cow position:
               
chr2:43729494-43729290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
370-575
               

               
Cow position:
               
chr2:78360378-78360580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
142, 7
               

               
Conread position:
               
373-573
               

               
Cow position:
               
chr2:49862625-49862824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
374-575
               

               
Cow position:
               
chr2:32988537-32988740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
375-575
               

               
Cow position:
               
chr2:19058126-19058322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
76, 125
               

               
Conread position:
               
376-574
               

               
Cow position:
               
chr2:83157102-83157298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
377-567
               

               
Cow position:
               
chr2:16487962-16488155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
377-569
               

               
Cow position:
               
chr2:37619939-37619746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
171, 135
               

               
Conread position:
               
377-573
               

               
Cow position:
               
chr2:38837542-38837346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr2:28330772-28330581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr2:45505781-45505979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr2:49717113-49716916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
378-570
               

               
Cow position:
               
chr2:73129124-73129316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-573
               

               
Cow position:
               
chr2:46968213-46968025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
378-574
               

               
Cow position:
               
chr2:66564707-66564512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr2:30179936-30179740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr2:40703690-40703501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr2:46164524-46164332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr2:52466472-52466279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
379-573
               

               
Cow position:
               
chr2:44620563-44620756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
379-575
               

               
Cow position:
               
chr2:19319980-19320173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
139, 34
               

               
Conread position:
               
379-575
               

               
Cow position:
               
chr2:39566717-39566526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
176, 157
               

               
Conread position:
               
379-575
               

               
Cow position:
               
chr2:69780200-69779997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
384-575
               

               
Cow position:
               
chr2:46053452-46053643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
387-575
               

               
Cow position:
               
chr2:16669453-16669640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
390-575
               

               
Cow position:
               
chr2:3739858-3739672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
394-573
               

               
Cow position:
               
chr2:46316864-46317041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
394-575
               

               
Cow position:
               
chr2:51388993-51388812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-575
               

               
Cow position:
               
chr2:58310679-58310860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-575
               

               
Cow position:
               
chr2:78682544-78682725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-575
               

               
Cow position:
               
chr2:79235513-79235695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
132, 157
               

               
Conread position:
               
395-570
               

               
Cow position:
               
chr2:12139560-12139380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
395-575
               

               
Cow position:
               
chr2:39334668-39334488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
395-575
               

               
Cow position:
               
chr2:46014759-46014939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
115, 122
               

               
Conread position:
               
395-575
               

               
Cow position:
               
chr2:72315819-72315642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
396-552
               

               
Cow position:
               
chr2:50818958-50818800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
396-570
               

               
Cow position:
               
chr2:9062671-9062845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
396-575
               

               
Cow position:
               
chr2:29395015-29394836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
400-575
               

               
Cow position:
               
chr2:38162801-38162631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
401-575
               

               
Cow position:
               
chr2:53652850-53653023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr2:13468217-13468386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
404-575
               

               
Cow position:
               
chr2:16667939-16668104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
405-573
               

               
Cow position:
               
chr2:36117252-36117417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
405-575
               

               
Cow position:
               
chr2:72342854-72342683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
406-575
               

               
Cow position:
               
chr2:26694611-26694780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
411-575
               

               
Cow position:
               
chr2:78379410-78379251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
412-575
               

               
Cow position:
               
chr2:26454644-26454481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
416-575
               

               
Cow position:
               
chr2:12873425-12873577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 108
               

               
Conread position:
               
421-574
               

               
Cow position:
               
chr2:21949994-21950143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
421-575
               

               
Cow position:
               
chr2:485595-485745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
423-570
               

               
Cow position:
               
chr2:81233091-81232942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
436-573
               

               
Cow position:
               
chr2:73923846-73923983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr2:1364565-1364427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr2:36124467-36124603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr2:37059135-37058996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr2:39483517-39483656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr2:42897699-42897838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
439-575
               

               
Cow position:
               
chr2:64473316-64473182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 105
               

               
Conread position:
               
440-575
               

               
Cow position:
               
chr2:16751841-16751706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
444-556
               

               
Cow position:
               
chr2:5815977-5815865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
444-573
               

               
Cow position:
               
chr2:70657230-70657365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
446-567
               

               
Cow position:
               
chr2:27599455-27599336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
446-575
               

               
Cow position:
               
chr2:40508553-40508424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
448-573
               

               
Cow position:
               
chr2:68657191-68657317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
451-575
               

               
Cow position:
               
chr2:72359586-72359461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
454-570
               

               
Cow position:
               
chr2:74198279-74198162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               
Show alignments to all cow chromosomes.