• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rcmu27_f11.y1
        

               
Conread position:
               
112-429
               

               
Cow position:
               
chr24:35795046-35794733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
122-575
               

               
Cow position:
               
chr24:29781867-29782309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 25
               

               
Conread position:
               
135-526
               

               
Cow position:
               
chr24:29673235-29673619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
138-416
               

               
Cow position:
               
chr24:17363928-17363659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
147-326
               

               
Cow position:
               
chr24:21522828-21523009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
147-337
               

               
Cow position:
               
chr24:25424792-25424973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
147-356
               

               
Cow position:
               
chr24:27543747-27543538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
183, 27
               

               
Conread position:
               
147-357
               

               
Cow position:
               
chr24:19658277-19658496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
147-362
               

               
Cow position:
               
chr24:591639-591857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
147-362
               

               
Cow position:
               
chr24:35073821-35074037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
147-415
               

               
Cow position:
               
chr24:18266443-18266174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-469
               

               
Cow position:
               
chr24:3430464-3430775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
227, 11
               

               
Conread position:
               
147-498
               

               
Cow position:
               
chr24:19492-19123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
147-508
               

               
Cow position:
               
chr24:28690429-28690765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
192, 27
               

               
Conread position:
               
147-508
               

               
Cow position:
               
chr24:32370182-32369834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
147-521
               

               
Cow position:
               
chr24:29063917-29063565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-532
               

               
Cow position:
               
chr24:18331465-18331825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
147-534
               

               
Cow position:
               
chr24:5754570-5754944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
376, 27
               

               
Conread position:
               
147-539
               

               
Cow position:
               
chr24:33153511-33153889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
189, 27
               

               
Conread position:
               
147-569
               

               
Cow position:
               
chr24:1269533-1269916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-570
               

               
Cow position:
               
chr24:39483202-39483603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr24:20225466-20225892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr24:25885429-25885003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr24:28303619-28303217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
315, 16
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr24:30314307-30313884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr24:33621757-33621333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
151-472
               

               
Cow position:
               
chr24:6149758-6150068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
5, 21
               

               
Conread position:
               
155-507
               

               
Cow position:
               
chr24:201900-201557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
155-575
               

               
Cow position:
               
chr24:35332452-35332873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
158-351
               

               
Cow position:
               
chr24:30776928-30776732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
158-374
               

               
Cow position:
               
chr24:34564866-34565080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
158-506
               

               
Cow position:
               
chr24:26732187-26732528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
158-567
               

               
Cow position:
               
chr24:6071333-6071727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
160-328
               

               
Cow position:
               
chr24:32158531-32158360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
160-356
               

               
Cow position:
               
chr24:7301195-7301399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
161-301
               

               
Cow position:
               
chr24:24002717-24002863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
161-575
               

               
Cow position:
               
chr24:28553805-28553424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
163-388
               

               
Cow position:
               
chr24:21860477-21860255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 80
               

               
Conread position:
               
163-411
               

               
Cow position:
               
chr24:29027791-29028025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
163-416
               

               
Cow position:
               
chr24:18405562-18405322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
170, 11
               

               
Conread position:
               
163-417
               

               
Cow position:
               
chr24:28353896-28354145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
124, 11
               

               
Conread position:
               
163-520
               

               
Cow position:
               
chr24:29679566-29679219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 11
               

               
Conread position:
               
163-536
               

               
Cow position:
               
chr24:17955703-17955336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
163-570
               

               
Cow position:
               
chr24:40129867-40130278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
163-573
               

               
Cow position:
               
chr24:27149142-27149527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
175, 11
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr24:16994637-16995023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
105, 66
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr24:27096430-27096839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr24:34272546-34272964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
67, 88
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr24:41980920-41980515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 11
               

               
Conread position:
               
165-337
               

               
Cow position:
               
chr24:18734608-18734435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
165-355
               

               
Cow position:
               
chr24:15473102-15473298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-416
               

               
Cow position:
               
chr24:17567137-17567374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
171, 9
               

               
Conread position:
               
165-428
               

               
Cow position:
               
chr24:14729155-14729404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
214, 9
               

               
Conread position:
               
165-534
               

               
Cow position:
               
chr24:30229215-30229584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-563
               

               
Cow position:
               
chr24:27726257-27725878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
173, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr24:15057149-15057532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
169-508
               

               
Cow position:
               
chr24:39226749-39227075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 5
               

               
Conread position:
               
171-520
               

               
Cow position:
               
chr24:41068020-41068353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 154
               

               
Conread position:
               
171-565
               

               
Cow position:
               
chr24:11839930-11840321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 203
               

               
Conread position:
               
171-567
               

               
Cow position:
               
chr24:15861849-15861454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
162, 104
               

               
Conread position:
               
171-575
               

               
Cow position:
               
chr24:19535496-19535108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
173-324
               

               
Cow position:
               
chr24:2730816-2730666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
173-377
               

               
Cow position:
               
chr24:40184378-40184583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
173-488
               

               
Cow position:
               
chr24:36404394-36404083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
173-511
               

               
Cow position:
               
chr24:24755203-24755531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
121, 80
               

               
Conread position:
               
173-567
               

               
Cow position:
               
chr24:18485246-18484856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
173-573
               

               
Cow position:
               
chr24:20942923-20943303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
174-296
               

               
Cow position:
               
chr24:11064610-11064729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
174-299
               

               
Cow position:
               
chr24:15666654-15666525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-304
               

               
Cow position:
               
chr24:19804442-19804574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 108
               

               
Conread position:
               
174-311
               

               
Cow position:
               
chr24:29606312-29606177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
174-336
               

               
Cow position:
               
chr24:28600853-28600699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr24:6900579-6900743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr24:11006970-11007136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr24:25950912-25950750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr24:34532878-34533044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr24:38375039-38375201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
174-349
               

               
Cow position:
               
chr24:33238793-33238611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
101, 143
               

               
Conread position:
               
174-353
               

               
Cow position:
               
chr24:27874359-27874537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
174-355
               

               
Cow position:
               
chr24:18324371-18324559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-355
               

               
Cow position:
               
chr24:21264756-21264571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr24:18390534-18390348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
165, 101
               

               
Conread position:
               
174-361
               

               
Cow position:
               
chr24:14279643-14279835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
53, 181
               

               
Conread position:
               
174-361
               

               
Cow position:
               
chr24:30545101-30544916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
163, 61
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr24:24137096-24136915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
151, 35
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr24:29389001-29389185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
174-367
               

               
Cow position:
               
chr24:6677258-6677463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
174-370
               

               
Cow position:
               
chr24:40055967-40055776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr24:32124887-32124686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
174-374
               

               
Cow position:
               
chr24:42007500-42007696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
163, 62
               

               
Conread position:
               
174-381
               

               
Cow position:
               
chr24:39493052-39493260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
174-387
               

               
Cow position:
               
chr24:6340772-6340984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
174-395
               

               
Cow position:
               
chr24:43635189-43635413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
52, 105
               

               
Conread position:
               
174-396
               

               
Cow position:
               
chr24:40908771-40909002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
174-406
               

               
Cow position:
               
chr24:11876638-11876867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
174-430
               

               
Cow position:
               
chr24:814510-814258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
189, 104
               

               
Conread position:
               
174-437
               

               
Cow position:
               
chr24:6487675-6487930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
174-463
               

               
Cow position:
               
chr24:20024362-20024649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 188
               

               
Conread position:
               
174-480
               

               
Cow position:
               
chr24:41985731-41986048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
74, 216
               

               
Conread position:
               
174-486
               

               
Cow position:
               
chr24:3152822-3152519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
174-488
               

               
Cow position:
               
chr24:43432556-43432851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
164, 40
               

               
Conread position:
               
174-491
               

               
Cow position:
               
chr24:27054155-27054475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
174-503
               

               
Cow position:
               
chr24:43364118-43364435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
163, 61
               

               
Conread position:
               
174-508
               

               
Cow position:
               
chr24:27824219-27824543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
165, 50
               

               
Conread position:
               
174-511
               

               
Cow position:
               
chr24:43927567-43927249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr24:27748404-27748725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
162, 70
               

               
Conread position:
               
174-514
               

               
Cow position:
               
chr24:8886671-8886997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
174-519
               

               
Cow position:
               
chr24:27290630-27290963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr24:16268349-16268036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
174-525
               

               
Cow position:
               
chr24:15246880-15246545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
83, 101
               

               
Conread position:
               
174-528
               

               
Cow position:
               
chr24:6450269-6450587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
163, 50
               

               
Conread position:
               
174-529
               

               
Cow position:
               
chr24:24250487-24250822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
139, 54
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr24:18970737-18970401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
162, 40
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr24:31159384-31159721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
186, 50
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr24:28062700-28063056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
174-537
               

               
Cow position:
               
chr24:30484189-30483831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr24:11119037-11119388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
174-539
               

               
Cow position:
               
chr24:19769253-19769603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
322, 45
               

               
Conread position:
               
174-544
               

               
Cow position:
               
chr24:41755618-41755977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
174-546
               

               
Cow position:
               
chr24:2391946-2392304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
51, 153
               

               
Conread position:
               
174-546
               

               
Cow position:
               
chr24:43200519-43200155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
174-553
               

               
Cow position:
               
chr24:2402622-2402248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
174-560
               

               
Cow position:
               
chr24:19466178-19465785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
174-563
               

               
Cow position:
               
chr24:18025217-18024836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
60, 108
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr24:5652222-5651865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
265, 88
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr24:32054427-32054790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
163, 75
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr24:33098733-33098335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr24:42345254-42344857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 186
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr24:11886912-11887296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr24:18732368-18731963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr24:27608343-27607971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
165, 101
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr24:37650425-37650815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 101
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr24:44987617-44987232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 40
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr24:17311454-17311081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 97
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr24:27039793-27040193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 198
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr24:31816340-31816720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr24:39440802-39440421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 166
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:3165576-3165965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
164, 101
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:3493648-3494026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:7913753-7914154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 193
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:13808823-13808418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 124
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:17104811-17104424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 54
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:17294432-17294050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:17407144-17407536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:17860496-17860117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:18374529-18374909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:18474993-18474584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:18741816-18741420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
161, 101
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:23442826-23442436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:23556576-23556192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:24491256-24490880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:25320744-25321130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
50, 166
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:27844765-27844388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:27906189-27906583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 118
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:28496834-28496437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:29596061-29595655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:31811939-31812330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:33372305-33372691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:33944162-33944551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:38347435-38347821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 186
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:38814726-38815119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:39850124-39849747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:40300910-40301305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr24:44041254-44040866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 57
               

               
Conread position:
               
175-347
               

               
Cow position:
               
chr24:6914008-6913836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
175-365
               

               
Cow position:
               
chr24:27267391-27267581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
107, 58
               

               
Conread position:
               
175-369
               

               
Cow position:
               
chr24:2675085-2675271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
162, 69
               

               
Conread position:
               
175-370
               

               
Cow position:
               
chr24:36486304-36486107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
175-370
               

               
Cow position:
               
chr24:37246462-37246258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
175-525
               

               
Cow position:
               
chr24:28721644-28721982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
175-540
               

               
Cow position:
               
chr24:44809000-44809363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
54, 83
               

               
Conread position:
               
175-568
               

               
Cow position:
               
chr24:42103130-42103503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
175-570
               

               
Cow position:
               
chr24:211737-212110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr24:5141696-5142086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr24:10498966-10499363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
56, 114
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr24:43028570-43028183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 107
               

               
Conread position:
               
176-354
               

               
Cow position:
               
chr24:27207438-27207258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 99
               

               
Conread position:
               
176-356
               

               
Cow position:
               
chr24:20970035-20969862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
161, 59
               

               
Conread position:
               
176-358
               

               
Cow position:
               
chr24:25229301-25229117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
130, 102
               

               
Conread position:
               
176-362
               

               
Cow position:
               
chr24:27809939-27810131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 97
               

               
Conread position:
               
176-362
               

               
Cow position:
               
chr24:30860393-30860581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
153, 127
               

               
Conread position:
               
176-369
               

               
Cow position:
               
chr24:16625744-16625537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
176-373
               

               
Cow position:
               
chr24:40091815-40091619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
97, 59
               

               
Conread position:
               
176-390
               

               
Cow position:
               
chr24:8814238-8814032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
176-412
               

               
Cow position:
               
chr24:30177993-30178226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
200, 49
               

               
Conread position:
               
176-415
               

               
Cow position:
               
chr24:27967837-27968072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
161, 59
               

               
Conread position:
               
176-429
               

               
Cow position:
               
chr24:7917612-7917359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 198
               

               
Conread position:
               
176-511
               

               
Cow position:
               
chr24:2096132-2095798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
163, 99
               

               
Conread position:
               
176-512
               

               
Cow position:
               
chr24:29170722-29171046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 136
               

               
Conread position:
               
176-533
               

               
Cow position:
               
chr24:32205037-32204689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
176-539
               

               
Cow position:
               
chr24:39159787-39159438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
176-553
               

               
Cow position:
               
chr24:34742506-34742879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
176-573
               

               
Cow position:
               
chr24:35985962-35985590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr24:17943408-17943032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
160, 65
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr24:24457491-24457094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 113
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr24:26929192-26928796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr24:32609395-32609794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 106
               

               
Conread position:
               
177-298
               

               
Cow position:
               
chr24:11874875-11874754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr24:27719995-27719812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
145, 31
               

               
Conread position:
               
177-362
               

               
Cow position:
               
chr24:42825740-42825550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
177-374
               

               
Cow position:
               
chr24:27052737-27052538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
160, 85
               

               
Conread position:
               
177-401
               

               
Cow position:
               
chr24:5151991-5152210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 151
               

               
Conread position:
               
177-502
               

               
Cow position:
               
chr24:20741080-20741398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
157, 59
               

               
Conread position:
               
177-522
               

               
Cow position:
               
chr24:28319442-28319115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
178-361
               

               
Cow position:
               
chr24:6508005-6507826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 128
               

               
Conread position:
               
178-375
               

               
Cow position:
               
chr24:5435288-5435086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
178-426
               

               
Cow position:
               
chr24:34315116-34315353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
151, 48
               

               
Conread position:
               
178-429
               

               
Cow position:
               
chr24:39219088-39218840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 162
               

               
Conread position:
               
178-508
               

               
Cow position:
               
chr24:33724092-33723764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 113
               

               
Conread position:
               
178-549
               

               
Cow position:
               
chr24:2108493-2108122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
178-574
               

               
Cow position:
               
chr24:28699816-28700192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
161, 97
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr24:22114498-22114874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 160
               

               
Conread position:
               
179-416
               

               
Cow position:
               
chr24:36555070-36554844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
156, 71
               

               
Conread position:
               
179-498
               

               
Cow position:
               
chr24:17159506-17159821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
179-500
               

               
Cow position:
               
chr24:7377336-7377026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
201, 70
               

               
Conread position:
               
179-519
               

               
Cow position:
               
chr24:18974960-18975301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
157, 109
               

               
Conread position:
               
179-567
               

               
Cow position:
               
chr24:32693462-32693859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
45, 129
               

               
Conread position:
               
179-570
               

               
Cow position:
               
chr24:20874436-20874820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
179-573
               

               
Cow position:
               
chr24:11045797-11045415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
95, 71
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr24:9222616-9222235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr24:11005422-11005820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr24:34761653-34762041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr24:36174023-36173634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
72, 110
               

               
Conread position:
               
180-566
               

               
Cow position:
               
chr24:10671146-10671534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 116
               

               
Conread position:
               
181-491
               

               
Cow position:
               
chr24:32759002-32758698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
181-551
               

               
Cow position:
               
chr24:33222178-33221808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
158, 55
               

               
Conread position:
               
181-575
               

               
Cow position:
               
chr24:16870024-16869637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 110
               

               
Conread position:
               
181-575
               

               
Cow position:
               
chr24:17285236-17284838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
183-361
               

               
Cow position:
               
chr24:18695385-18695563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 70
               

               
Conread position:
               
183-575
               

               
Cow position:
               
chr24:18343812-18344211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 174
               

               
Conread position:
               
183-575
               

               
Cow position:
               
chr24:19179681-19179291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
183-575
               

               
Cow position:
               
chr24:25194030-25194411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
184-420
               

               
Cow position:
               
chr24:31382673-31382894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
185-574
               

               
Cow position:
               
chr24:30235635-30236016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 104
               

               
Conread position:
               
185-575
               

               
Cow position:
               
chr24:20587931-20588318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 112
               

               
Conread position:
               
186-307
               

               
Cow position:
               
chr24:6742082-6741959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
188-566
               

               
Cow position:
               
chr24:20250135-20249757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
189-575
               

               
Cow position:
               
chr24:27299941-27300306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
190-370
               

               
Cow position:
               
chr24:34396402-34396222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
190-535
               

               
Cow position:
               
chr24:18771416-18771074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
190-539
               

               
Cow position:
               
chr24:28327312-28326970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
147, 57
               

               
Conread position:
               
193-494
               

               
Cow position:
               
chr24:22263307-22263595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
239, 56
               

               
Conread position:
               
193-494
               

               
Cow position:
               
chr24:33981460-33981756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
43, 161
               

               
Conread position:
               
193-575
               

               
Cow position:
               
chr24:10518329-10518700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
193-575
               

               
Cow position:
               
chr24:22689812-22689428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
194-569
               

               
Cow position:
               
chr24:31036132-31036478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
210, 35
               

               
Conread position:
               
197-552
               

               
Cow position:
               
chr24:6102600-6102954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 142
               

               
Conread position:
               
200-512
               

               
Cow position:
               
chr24:6141183-6140866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
200-538
               

               
Cow position:
               
chr24:3663945-3664287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
200-542
               

               
Cow position:
               
chr24:16509753-16510092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
139, 29
               

               
Conread position:
               
202-574
               

               
Cow position:
               
chr24:22079239-22079607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 90
               

               
Conread position:
               
204-538
               

               
Cow position:
               
chr24:15373194-15373516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
206-372
               

               
Cow position:
               
chr24:29708017-29707844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
75, 156
               

               
Conread position:
               
207-486
               

               
Cow position:
               
chr24:15707655-15707386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
76, 156
               

               
Conread position:
               
210-532
               

               
Cow position:
               
chr24:34008790-34008468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
210-575
               

               
Cow position:
               
chr24:16645531-16645173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
211-358
               

               
Cow position:
               
chr24:5906-5756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 102
               

               
Conread position:
               
211-575
               

               
Cow position:
               
chr24:352813-352459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
302, 74
               

               
Conread position:
               
212-575
               

               
Cow position:
               
chr24:7476557-7476205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
212-575
               

               
Cow position:
               
chr24:28990358-28990707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
213-532
               

               
Cow position:
               
chr24:28253500-28253824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 62
               

               
Conread position:
               
219-494
               

               
Cow position:
               
chr24:37695006-37694745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
213, 5
               

               
Conread position:
               
219-537
               

               
Cow position:
               
chr24:10125666-10125994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr24:16089037-16089377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
316, 7
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr24:39143409-39143757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
220-567
               

               
Cow position:
               
chr24:20801543-20801208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
220-575
               

               
Cow position:
               
chr24:25756485-25756153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
220-575
               

               
Cow position:
               
chr24:43365649-43365980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 87
               

               
Conread position:
               
222-575
               

               
Cow position:
               
chr24:24155702-24155365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
53, 112
               

               
Conread position:
               
224-511
               

               
Cow position:
               
chr24:30897733-30897454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
224-575
               

               
Cow position:
               
chr24:13626087-13626431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 117
               

               
Conread position:
               
226-515
               

               
Cow position:
               
chr24:16895628-16895348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
227-519
               

               
Cow position:
               
chr24:32070776-32071053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
228-567
               

               
Cow position:
               
chr24:26554792-26554457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
229-369
               

               
Cow position:
               
chr24:30226750-30226893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
229-575
               

               
Cow position:
               
chr24:21606851-21606531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
231-575
               

               
Cow position:
               
chr24:41423421-41423741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
232-575
               

               
Cow position:
               
chr24:27220278-27219943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
236-575
               

               
Cow position:
               
chr24:19800663-19800984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
238-575
               

               
Cow position:
               
chr24:18999866-19000188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 125
               

               
Conread position:
               
239-566
               

               
Cow position:
               
chr24:10299903-10300216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 69
               

               
Conread position:
               
239-575
               

               
Cow position:
               
chr24:29586813-29587145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 95
               

               
Conread position:
               
243-575
               

               
Cow position:
               
chr24:17752291-17751963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
244-573
               

               
Cow position:
               
chr24:12200588-12200264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
244-575
               

               
Cow position:
               
chr24:18357228-18356908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
245-530
               

               
Cow position:
               
chr24:23187091-23186813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
249-543
               

               
Cow position:
               
chr24:18017056-18017343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 39
               

               
Conread position:
               
250-570
               

               
Cow position:
               
chr24:27630234-27630539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
254-575
               

               
Cow position:
               
chr24:39627701-39628023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
263-575
               

               
Cow position:
               
chr24:18281791-18281490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
263-575
               

               
Cow position:
               
chr24:39289896-39290192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
265-575
               

               
Cow position:
               
chr24:39523599-39523305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
268-575
               

               
Cow position:
               
chr24:35059574-35059879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
277-575
               

               
Cow position:
               
chr24:14550654-14550935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
277-575
               

               
Cow position:
               
chr24:36008342-36008631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
279-570
               

               
Cow position:
               
chr24:28233907-28234180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
280-575
               

               
Cow position:
               
chr24:389960-390245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
281-573
               

               
Cow position:
               
chr24:10242921-10242637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
286-575
               

               
Cow position:
               
chr24:23863769-23863481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
288-575
               

               
Cow position:
               
chr24:5397323-5397055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
291-575
               

               
Cow position:
               
chr24:20594408-20594693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
294-571
               

               
Cow position:
               
chr24:29561701-29561437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 84
               

               
Conread position:
               
299-575
               

               
Cow position:
               
chr24:37267539-37267810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
309-570
               

               
Cow position:
               
chr24:37975092-37974844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
317-570
               

               
Cow position:
               
chr24:230172-230420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
318-575
               

               
Cow position:
               
chr24:28342247-28342506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
326-575
               

               
Cow position:
               
chr24:39911132-39910886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
339-575
               

               
Cow position:
               
chr24:24810431-24810671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
340-570
               

               
Cow position:
               
chr24:15288742-15288967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
346-575
               

               
Cow position:
               
chr24:31049536-31049768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
357-575
               

               
Cow position:
               
chr24:5360649-5360856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
155, 61
               

               
Conread position:
               
359-573
               

               
Cow position:
               
chr24:3656435-3656220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
359-573
               

               
Cow position:
               
chr24:4599645-4599854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
360-538
               

               
Cow position:
               
chr24:39791473-39791649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
19, 155
               

               
Conread position:
               
361-565
               

               
Cow position:
               
chr24:42862560-42862760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
361-575
               

               
Cow position:
               
chr24:8392799-8393014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
363-575
               

               
Cow position:
               
chr24:15353379-15353589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
367-567
               

               
Cow position:
               
chr24:32190999-32191195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
143, 33
               

               
Conread position:
               
367-574
               

               
Cow position:
               
chr24:22156085-22156293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 174
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr24:2693980-2693775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr24:27284760-27284969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
368-573
               

               
Cow position:
               
chr24:26001328-26001532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
369-575
               

               
Cow position:
               
chr24:2992936-2992735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
369-575
               

               
Cow position:
               
chr24:21835016-21834818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
370-575
               

               
Cow position:
               
chr24:20960598-20960801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
147, 48
               

               
Conread position:
               
370-575
               

               
Cow position:
               
chr24:23575223-23575014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
370-575
               

               
Cow position:
               
chr24:42984334-42984540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
373-575
               

               
Cow position:
               
chr24:43405906-43406105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
375-575
               

               
Cow position:
               
chr24:37823476-37823669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
376-565
               

               
Cow position:
               
chr24:13948072-13948259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
132, 75
               

               
Conread position:
               
376-575
               

               
Cow position:
               
chr24:11036886-11036693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr24:14989150-14989347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
378-571
               

               
Cow position:
               
chr24:30038822-30039015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr24:10294439-10294243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr24:11028733-11028542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr24:19730730-19730927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
131, 117
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr24:25263788-25263591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
148, 116
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr24:44104218-44104023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
380-575
               

               
Cow position:
               
chr24:2703659-2703465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
387-573
               

               
Cow position:
               
chr24:5447309-5447122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
388-552
               

               
Cow position:
               
chr24:36303357-36303190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
389-573
               

               
Cow position:
               
chr24:15052760-15052576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
392-575
               

               
Cow position:
               
chr24:32230543-32230359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 151
               

               
Conread position:
               
394-573
               

               
Cow position:
               
chr24:19966109-19965932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
394-573
               

               
Cow position:
               
chr24:42903776-42903954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 42
               

               
Conread position:
               
394-575
               

               
Cow position:
               
chr24:14348037-14348217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
394-575
               

               
Cow position:
               
chr24:22567070-22567251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
395-575
               

               
Cow position:
               
chr24:17689643-17689463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 101
               

               
Conread position:
               
401-575
               

               
Cow position:
               
chr24:16640883-16641058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
401-575
               

               
Cow position:
               
chr24:20017456-20017280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
412-575
               

               
Cow position:
               
chr24:18874836-18874675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
421-575
               

               
Cow position:
               
chr24:39904010-39903863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
428-575
               

               
Cow position:
               
chr24:40055510-40055364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
436-570
               

               
Cow position:
               
chr24:27066239-27066370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
436-573
               

               
Cow position:
               
chr24:9300636-9300773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr24:25947853-25947714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
437-575
               

               
Cow position:
               
chr24:26588230-26588363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
439-575
               

               
Cow position:
               
chr24:14373570-14373433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
441-573
               

               
Cow position:
               
chr24:3193261-3193128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
444-575
               

               
Cow position:
               
chr24:162020-162151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
444-575
               

               
Cow position:
               
chr24:18401303-18401172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
447-575
               

               
Cow position:
               
chr24:38428093-38427965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
457-567
               

               
Cow position:
               
chr24:40578208-40578318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.