• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rcmu27_f11.y1
        

               
Conread position:
               
129-526
               

               
Cow position:
               
chr27:19546283-19546677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
146-370
               

               
Cow position:
               
chr27:9090597-9090822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
146-533
               

               
Cow position:
               
chr27:27683910-27684286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
146-575
               

               
Cow position:
               
chr27:23452684-23452250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
147-327
               

               
Cow position:
               
chr27:2011900-2012078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
147-362
               

               
Cow position:
               
chr27:30177371-30177588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-365
               

               
Cow position:
               
chr27:29251083-29250864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
147-368
               

               
Cow position:
               
chr27:24445953-24446172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
147-371
               

               
Cow position:
               
chr27:12231704-12231932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
147-378
               

               
Cow position:
               
chr27:22723503-22723734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
191, 27
               

               
Conread position:
               
147-485
               

               
Cow position:
               
chr27:27843789-27844128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-507
               

               
Cow position:
               
chr27:20553920-20553584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
156, 27
               

               
Conread position:
               
147-519
               

               
Cow position:
               
chr27:23882171-23882527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-533
               

               
Cow position:
               
chr27:26643876-26643516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-534
               

               
Cow position:
               
chr27:24227590-24227974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 27
               

               
Conread position:
               
147-536
               

               
Cow position:
               
chr27:30359598-30359231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-538
               

               
Cow position:
               
chr27:31147470-31147866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
147-570
               

               
Cow position:
               
chr27:20354783-20354392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
184, 27
               

               
Conread position:
               
147-573
               

               
Cow position:
               
chr27:1768432-1768833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
192, 27
               

               
Conread position:
               
147-573
               

               
Cow position:
               
chr27:18507835-18507436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
118, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr27:12516402-12515981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr27:19661146-19660715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr27:26999221-26999636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
379, 27
               

               
Conread position:
               
150-549
               

               
Cow position:
               
chr27:26218899-26218522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 24
               

               
Conread position:
               
151-371
               

               
Cow position:
               
chr27:20592185-20591961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
158-508
               

               
Cow position:
               
chr27:30354151-30354493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
180, 16
               

               
Conread position:
               
161-575
               

               
Cow position:
               
chr27:18030866-18031283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
162-358
               

               
Cow position:
               
chr27:31499257-31499055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 70
               

               
Conread position:
               
162-575
               

               
Cow position:
               
chr27:11435140-11435540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 14
               

               
Conread position:
               
162-575
               

               
Cow position:
               
chr27:13875925-13875520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
163-365
               

               
Cow position:
               
chr27:27259797-27259597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
176, 112
               

               
Conread position:
               
163-369
               

               
Cow position:
               
chr27:29283221-29283429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
176, 11
               

               
Conread position:
               
163-385
               

               
Cow position:
               
chr27:12596946-12596732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
174, 11
               

               
Conread position:
               
163-406
               

               
Cow position:
               
chr27:16871728-16871963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
163-429
               

               
Cow position:
               
chr27:13198104-13197835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
163-507
               

               
Cow position:
               
chr27:18593458-18593125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
68, 11
               

               
Conread position:
               
163-538
               

               
Cow position:
               
chr27:19718111-19717736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
163-546
               

               
Cow position:
               
chr27:910896-911281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
174, 87
               

               
Conread position:
               
163-567
               

               
Cow position:
               
chr27:21977949-21978348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 71
               

               
Conread position:
               
163-568
               

               
Cow position:
               
chr27:23632788-23632394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
163-570
               

               
Cow position:
               
chr27:15315681-15315314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
163-570
               

               
Cow position:
               
chr27:22547217-22547596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
163-573
               

               
Cow position:
               
chr27:19388207-19387808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 127
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr27:1353772-1353367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 11
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr27:6541813-6541422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
173, 70
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr27:22426640-22427048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
121, 205
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr27:26239212-26238811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr27:26508970-26509369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
165-337
               

               
Cow position:
               
chr27:28164226-28164390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
165-370
               

               
Cow position:
               
chr27:15858905-15859106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
172, 9
               

               
Conread position:
               
165-534
               

               
Cow position:
               
chr27:20641161-20641509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
345, 9
               

               
Conread position:
               
165-573
               

               
Cow position:
               
chr27:22220739-22220339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr27:10307110-10307516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr27:18544183-18543775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 8
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr27:24331911-24331501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr27:27388843-27389240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
174, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr27:30374385-30374795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
168-374
               

               
Cow position:
               
chr27:23070176-23070383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
168-575
               

               
Cow position:
               
chr27:19668609-19669018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
169-575
               

               
Cow position:
               
chr27:11535915-11536320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 5
               

               
Conread position:
               
171-374
               

               
Cow position:
               
chr27:27550567-27550765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
166, 82
               

               
Conread position:
               
173-327
               

               
Cow position:
               
chr27:30989665-30989819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 116
               

               
Conread position:
               
173-365
               

               
Cow position:
               
chr27:7958657-7958856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
102, 54
               

               
Conread position:
               
173-508
               

               
Cow position:
               
chr27:8353655-8353330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
173-508
               

               
Cow position:
               
chr27:26151198-26150869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
164, 70
               

               
Conread position:
               
173-538
               

               
Cow position:
               
chr27:30988976-30988619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
75, 116
               

               
Conread position:
               
173-570
               

               
Cow position:
               
chr27:4390076-4390467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
173-575
               

               
Cow position:
               
chr27:20828529-20828920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
174-299
               

               
Cow position:
               
chr27:68263-68392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-307
               

               
Cow position:
               
chr27:18922628-18922496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
123, 101
               

               
Conread position:
               
174-322
               

               
Cow position:
               
chr27:9978004-9977847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr27:21418889-21419044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-328
               

               
Cow position:
               
chr27:27055755-27055599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-335
               

               
Cow position:
               
chr27:27141771-27141612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr27:16620169-16620004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
51, 108
               

               
Conread position:
               
174-346
               

               
Cow position:
               
chr27:22179620-22179788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
162, 73
               

               
Conread position:
               
174-351
               

               
Cow position:
               
chr27:26625302-26625130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 81
               

               
Conread position:
               
174-352
               

               
Cow position:
               
chr27:22771935-22771749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr27:6058680-6058493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
58, 161
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr27:14902471-14902661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr27:29399996-29399807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
174-361
               

               
Cow position:
               
chr27:22498730-22498546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
174-361
               

               
Cow position:
               
chr27:25790981-25790792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
165, 99
               

               
Conread position:
               
174-361
               

               
Cow position:
               
chr27:30362420-30362235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr27:23454964-23455167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr27:28190040-28190226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
163, 101
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr27:6523223-6523023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr27:8291834-8292020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
174-370
               

               
Cow position:
               
chr27:707125-706928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
164, 34
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr27:17926459-17926640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr27:30843901-30844096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
174-372
               

               
Cow position:
               
chr27:26398081-26398279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 113
               

               
Conread position:
               
174-372
               

               
Cow position:
               
chr27:28038160-28038362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
55, 108
               

               
Conread position:
               
174-374
               

               
Cow position:
               
chr27:18215233-18215029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 198
               

               
Conread position:
               
174-374
               

               
Cow position:
               
chr27:29515683-29515876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
165, 32
               

               
Conread position:
               
174-377
               

               
Cow position:
               
chr27:12429586-12429378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
50, 168
               

               
Conread position:
               
174-379
               

               
Cow position:
               
chr27:11255690-11255493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 51
               

               
Conread position:
               
174-387
               

               
Cow position:
               
chr27:11081373-11081158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
101, 10
               

               
Conread position:
               
174-391
               

               
Cow position:
               
chr27:732749-732532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 75
               

               
Conread position:
               
174-401
               

               
Cow position:
               
chr27:27449257-27449477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 54
               

               
Conread position:
               
174-415
               

               
Cow position:
               
chr27:30670915-30670684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
165, 79
               

               
Conread position:
               
174-417
               

               
Cow position:
               
chr27:1183699-1183942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
174-423
               

               
Cow position:
               
chr27:27040785-27040538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
95, 191
               

               
Conread position:
               
174-469
               

               
Cow position:
               
chr27:815542-815252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
165, 51
               

               
Conread position:
               
174-469
               

               
Cow position:
               
chr27:24999557-24999850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
174-472
               

               
Cow position:
               
chr27:4065-3784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
174-490
               

               
Cow position:
               
chr27:23472433-23472128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-503
               

               
Cow position:
               
chr27:26427951-26428276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 104
               

               
Conread position:
               
174-506
               

               
Cow position:
               
chr27:24014563-24014886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
139, 101
               

               
Conread position:
               
174-507
               

               
Cow position:
               
chr27:1498491-1498167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
165, 40
               

               
Conread position:
               
174-507
               

               
Cow position:
               
chr27:16284650-16284327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
174-519
               

               
Cow position:
               
chr27:536634-536304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr27:27064262-27064600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
60, 114
               

               
Conread position:
               
174-521
               

               
Cow position:
               
chr27:1636764-1637097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 137
               

               
Conread position:
               
174-523
               

               
Cow position:
               
chr27:10992531-10992192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 99
               

               
Conread position:
               
174-525
               

               
Cow position:
               
chr27:21452892-21453260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr27:25411342-25411675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
130, 61
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr27:27136347-27136687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
174-529
               

               
Cow position:
               
chr27:4673198-4672842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
76, 103
               

               
Conread position:
               
174-529
               

               
Cow position:
               
chr27:24321367-24321016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr27:8942506-8942864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
163, 81
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr27:15272083-15271746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr27:17472990-17472639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 196
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr27:25277314-25276970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
174-536
               

               
Cow position:
               
chr27:4385889-4386238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
165, 62
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr27:22454603-22454955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
174-541
               

               
Cow position:
               
chr27:23483400-23483044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
162, 53
               

               
Conread position:
               
174-542
               

               
Cow position:
               
chr27:2957585-2957229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 120
               

               
Conread position:
               
174-543
               

               
Cow position:
               
chr27:20036951-20037301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
254, 58
               

               
Conread position:
               
174-551
               

               
Cow position:
               
chr27:2930419-2930780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
101, 157
               

               
Conread position:
               
174-551
               

               
Cow position:
               
chr27:20552592-20552973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
106, 54
               

               
Conread position:
               
174-555
               

               
Cow position:
               
chr27:25809345-25809713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
174-560
               

               
Cow position:
               
chr27:15866401-15866021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 189
               

               
Conread position:
               
174-560
               

               
Cow position:
               
chr27:27019923-27020298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 102
               

               
Conread position:
               
174-565
               

               
Cow position:
               
chr27:19685537-19685915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 61
               

               
Conread position:
               
174-565
               

               
Cow position:
               
chr27:20795961-20795586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
225, 45
               

               
Conread position:
               
174-566
               

               
Cow position:
               
chr27:27640814-27641218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 267
               

               
Conread position:
               
174-568
               

               
Cow position:
               
chr27:6550628-6550249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 70
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr27:18558541-18558150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 97
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr27:7412560-7412183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 115
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr27:15454389-15454000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr27:18739565-18739163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 183
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr27:23128632-23128254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr27:31372802-31373183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr27:21408375-21408778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 185
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr27:29831509-29831920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 142
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:2592719-2592324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:6500242-6499845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 162
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:7851554-7851173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:8062179-8062564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 100
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:10980041-10979647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 118
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:11815582-11815961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:13252187-13251811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
51, 108
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:13317777-13318190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:13638815-13639200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 129
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:14670203-14670593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:15668589-15668987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:21668947-21669325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
385, 75
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:22035196-22035584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
55, 103
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:22171476-22171089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 49
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:22440317-22439924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 104
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:23554142-23554542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 213
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:26864941-26865321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:28206975-28206591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:28276450-28276049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:28518463-28518080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 67
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:28931610-28932015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 194
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:29085937-29086329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
248, 45
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:30582915-30582524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
132, 62
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:30765209-30764820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 62
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:30814582-30814204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
161, 59
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:30868561-30868964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr27:30890464-30890088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
175-337
               

               
Cow position:
               
chr27:25783779-25783620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
175-376
               

               
Cow position:
               
chr27:23930141-23929952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
162, 53
               

               
Conread position:
               
175-520
               

               
Cow position:
               
chr27:27038667-27038998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
161, 49
               

               
Conread position:
               
175-539
               

               
Cow position:
               
chr27:21393328-21393684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
163, 80
               

               
Conread position:
               
175-550
               

               
Cow position:
               
chr27:26919736-26920103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr27:299207-299587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr27:15925511-15925129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
100, 58
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr27:17397270-17397664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr27:28921720-28922108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 82
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr27:30915178-30914794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
176-369
               

               
Cow position:
               
chr27:6037298-6037104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 73
               

               
Conread position:
               
176-376
               

               
Cow position:
               
chr27:22330494-22330696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
123, 51
               

               
Conread position:
               
176-386
               

               
Cow position:
               
chr27:13006010-13005805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
151, 53
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr27:4829632-4829845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
176-467
               

               
Cow position:
               
chr27:21350840-21351129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
176-469
               

               
Cow position:
               
chr27:30417854-30417560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
160, 49
               

               
Conread position:
               
176-481
               

               
Cow position:
               
chr27:1058504-1058799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
176-484
               

               
Cow position:
               
chr27:4812701-4813008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
176-498
               

               
Cow position:
               
chr27:30551171-30550851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
160, 65
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr27:6788134-6787807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
176-508
               

               
Cow position:
               
chr27:19647766-19648091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
157, 53
               

               
Conread position:
               
176-523
               

               
Cow position:
               
chr27:26413080-26413418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
160, 73
               

               
Conread position:
               
176-540
               

               
Cow position:
               
chr27:19543734-19544104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
99, 53
               

               
Conread position:
               
176-553
               

               
Cow position:
               
chr27:27003106-27003452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
176-561
               

               
Cow position:
               
chr27:22418589-22418963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 96
               

               
Conread position:
               
176-567
               

               
Cow position:
               
chr27:10582538-10582163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr27:26224093-26224469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 116
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr27:28001643-28002016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
162, 18
               

               
Conread position:
               
177-424
               

               
Cow position:
               
chr27:28018511-28018273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
177-472
               

               
Cow position:
               
chr27:25380165-25379875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
154, 73
               

               
Conread position:
               
177-512
               

               
Cow position:
               
chr27:9169470-9169791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
160, 98
               

               
Conread position:
               
177-536
               

               
Cow position:
               
chr27:27856508-27856156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
177-575
               

               
Cow position:
               
chr27:13411182-13411581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
177-575
               

               
Cow position:
               
chr27:16787001-16786618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
178-367
               

               
Cow position:
               
chr27:11412894-11412703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
159, 179
               

               
Conread position:
               
178-369
               

               
Cow position:
               
chr27:21569670-21569862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
159, 85
               

               
Conread position:
               
178-527
               

               
Cow position:
               
chr27:12246832-12246487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
178-540
               

               
Cow position:
               
chr27:11273742-11273391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
84, 57
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr27:15867564-15867180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
160, 32
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr27:16705420-16705040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr27:26433638-26434026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
179-370
               

               
Cow position:
               
chr27:24357438-24357238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
179-450
               

               
Cow position:
               
chr27:2682971-2683236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 73
               

               
Conread position:
               
179-494
               

               
Cow position:
               
chr27:7289937-7290237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
179-567
               

               
Cow position:
               
chr27:13843380-13842994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
157, 45
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr27:15204059-15204449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr27:16960369-16959985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
226, 62
               

               
Conread position:
               
180-315
               

               
Cow position:
               
chr27:20803615-20803480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
180-357
               

               
Cow position:
               
chr27:26380007-26380183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
157, 93
               

               
Conread position:
               
180-512
               

               
Cow position:
               
chr27:15408872-15409189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
180-517
               

               
Cow position:
               
chr27:16478176-16478494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
180-560
               

               
Cow position:
               
chr27:30406860-30407243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
180-574
               

               
Cow position:
               
chr27:28496203-28496583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
180-575
               

               
Cow position:
               
chr27:13841548-13841154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
180-575
               

               
Cow position:
               
chr27:25427737-25428124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
181-574
               

               
Cow position:
               
chr27:26424415-26424788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
182-316
               

               
Cow position:
               
chr27:13254586-13254718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 14
               

               
Conread position:
               
182-365
               

               
Cow position:
               
chr27:18434301-18434485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
183-374
               

               
Cow position:
               
chr27:22268673-22268477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
183-575
               

               
Cow position:
               
chr27:29184674-29185058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
330, 28
               

               
Conread position:
               
184-327
               

               
Cow position:
               
chr27:28008891-28009035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
184-538
               

               
Cow position:
               
chr27:15643343-15642996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
185-575
               

               
Cow position:
               
chr27:15871324-15870946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
186-365
               

               
Cow position:
               
chr27:19589641-19589460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
187-508
               

               
Cow position:
               
chr27:24477581-24477268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
188-570
               

               
Cow position:
               
chr27:27438341-27438716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 153
               

               
Conread position:
               
189-567
               

               
Cow position:
               
chr27:20046040-20045686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
303, 40
               

               
Conread position:
               
189-567
               

               
Cow position:
               
chr27:30871897-30872262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 99
               

               
Conread position:
               
190-573
               

               
Cow position:
               
chr27:7346822-7346459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
367, 50
               

               
Conread position:
               
190-575
               

               
Cow position:
               
chr27:19896918-19896550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
192-575
               

               
Cow position:
               
chr27:11480470-11480851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 163
               

               
Conread position:
               
192-575
               

               
Cow position:
               
chr27:16781024-16780646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
147, 58
               

               
Conread position:
               
196-575
               

               
Cow position:
               
chr27:23891093-23890720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
197-575
               

               
Cow position:
               
chr27:22735447-22735807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
198-476
               

               
Cow position:
               
chr27:20919041-20918774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
200-378
               

               
Cow position:
               
chr27:14343316-14343496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
137, 22
               

               
Conread position:
               
201-533
               

               
Cow position:
               
chr27:7731098-7731431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
82, 122
               

               
Conread position:
               
202-543
               

               
Cow position:
               
chr27:28270997-28271334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
74, 140
               

               
Conread position:
               
202-575
               

               
Cow position:
               
chr27:26489752-26490118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
203-503
               

               
Cow position:
               
chr27:715652-715357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
203-575
               

               
Cow position:
               
chr27:16103951-16103598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
210-511
               

               
Cow position:
               
chr27:1123176-1122880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
210-575
               

               
Cow position:
               
chr27:17331644-17331279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
213-575
               

               
Cow position:
               
chr27:427111-426757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
15, 76
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr27:7649457-7649804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
224-365
               

               
Cow position:
               
chr27:4011806-4011661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
224-365
               

               
Cow position:
               
chr27:10395134-10395274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
224-529
               

               
Cow position:
               
chr27:7614961-7615250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
224-542
               

               
Cow position:
               
chr27:8168302-8168613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
224-574
               

               
Cow position:
               
chr27:19500105-19500448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
224-575
               

               
Cow position:
               
chr27:16965715-16965362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
51, 156
               

               
Conread position:
               
225-508
               

               
Cow position:
               
chr27:20092712-20092983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
232-575
               

               
Cow position:
               
chr27:27442051-27442373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
43, 103
               

               
Conread position:
               
233-534
               

               
Cow position:
               
chr27:23545202-23545505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 118
               

               
Conread position:
               
233-575
               

               
Cow position:
               
chr27:20078985-20078652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
50, 125
               

               
Conread position:
               
234-575
               

               
Cow position:
               
chr27:26226173-26226501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
234-575
               

               
Cow position:
               
chr27:27694655-27694988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
25, 30
               

               
Conread position:
               
236-560
               

               
Cow position:
               
chr27:30260780-30261093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
187, 11
               

               
Conread position:
               
236-575
               

               
Cow position:
               
chr27:20101483-20101154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
239-518
               

               
Cow position:
               
chr27:26581323-26581596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
243-539
               

               
Cow position:
               
chr27:20497322-20497026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 129
               

               
Conread position:
               
244-541
               

               
Cow position:
               
chr27:29380965-29380673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
244-554
               

               
Cow position:
               
chr27:13274047-13274356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
67, 43
               

               
Conread position:
               
244-565
               

               
Cow position:
               
chr27:26833308-26832975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 208
               

               
Conread position:
               
244-575
               

               
Cow position:
               
chr27:11151783-11151458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 128
               

               
Conread position:
               
244-575
               

               
Cow position:
               
chr27:18646040-18646362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
249-575
               

               
Cow position:
               
chr27:21991258-21990930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 118
               

               
Conread position:
               
250-573
               

               
Cow position:
               
chr27:17994841-17995157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
250-575
               

               
Cow position:
               
chr27:23594417-23594106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
253-575
               

               
Cow position:
               
chr27:26188919-26188614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
69, 5
               

               
Conread position:
               
255-534
               

               
Cow position:
               
chr27:24940006-24939717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
255-575
               

               
Cow position:
               
chr27:22559725-22560039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
257-573
               

               
Cow position:
               
chr27:23511084-23510764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
276-566
               

               
Cow position:
               
chr27:5983296-5983011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
277-570
               

               
Cow position:
               
chr27:16088885-16088583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
54, 86
               

               
Conread position:
               
279-521
               

               
Cow position:
               
chr27:30389221-30389460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
279-575
               

               
Cow position:
               
chr27:6925163-6924869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
286-574
               

               
Cow position:
               
chr27:20514888-20514608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 84
               

               
Conread position:
               
286-575
               

               
Cow position:
               
chr27:26111842-26112131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
55, 89
               

               
Conread position:
               
287-552
               

               
Cow position:
               
chr27:7974240-7973984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
288-575
               

               
Cow position:
               
chr27:22489343-22489059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
291-575
               

               
Cow position:
               
chr27:23559969-23560242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
291-575
               

               
Cow position:
               
chr27:27405007-27405282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
296-575
               

               
Cow position:
               
chr27:31151434-31151170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
301-575
               

               
Cow position:
               
chr27:23860221-23859950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
312-575
               

               
Cow position:
               
chr27:15865652-15865397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
313-575
               

               
Cow position:
               
chr27:12459321-12459075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
314-568
               

               
Cow position:
               
chr27:13940520-13940760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
314-573
               

               
Cow position:
               
chr27:5614634-5614374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
316-575
               

               
Cow position:
               
chr27:20719328-20719072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
321-575
               

               
Cow position:
               
chr27:6290504-6290258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
331-575
               

               
Cow position:
               
chr27:31210577-31210337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 107
               

               
Conread position:
               
336-575
               

               
Cow position:
               
chr27:12564409-12564641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 24
               

               
Conread position:
               
336-575
               

               
Cow position:
               
chr27:19933079-19932853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
359-575
               

               
Cow position:
               
chr27:2885832-2886048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
13, 20
               

               
Conread position:
               
359-575
               

               
Cow position:
               
chr27:12658350-12658566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
359-575
               

               
Cow position:
               
chr27:23994420-23994628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
179, 55
               

               
Conread position:
               
361-575
               

               
Cow position:
               
chr27:17933925-17933710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
367-525
               

               
Cow position:
               
chr27:27673024-27673181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
367-567
               

               
Cow position:
               
chr27:15825728-15825928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr27:5553461-5553256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr27:20897031-20897233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr27:26852595-26852795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
369-575
               

               
Cow position:
               
chr27:14818221-14818017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
370-575
               

               
Cow position:
               
chr27:12425279-12425075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
57, 52
               

               
Conread position:
               
370-575
               

               
Cow position:
               
chr27:27740303-27740506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
375-532
               

               
Cow position:
               
chr27:18826538-18826381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
375-570
               

               
Cow position:
               
chr27:28478564-28478376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr27:10404134-10404330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr27:19508995-19508799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr27:26121742-26121545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr27:30455976-30455780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
378-567
               

               
Cow position:
               
chr27:7304623-7304811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr27:7802052-7801856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
378-575
               

               
Cow position:
               
chr27:19485855-19485658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
379-575
               

               
Cow position:
               
chr27:23507633-23507436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
390-575
               

               
Cow position:
               
chr27:24007438-24007252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
394-570
               

               
Cow position:
               
chr27:3518470-3518294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
394-573
               

               
Cow position:
               
chr27:26883291-26883471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
394-575
               

               
Cow position:
               
chr27:26245582-26245759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 38
               

               
Conread position:
               
395-543
               

               
Cow position:
               
chr27:29693442-29693294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
395-574
               

               
Cow position:
               
chr27:11982682-11982860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
395-574
               

               
Cow position:
               
chr27:23148130-23147949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
395-575
               

               
Cow position:
               
chr27:19557349-19557179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
395-575
               

               
Cow position:
               
chr27:26793819-26793997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
405-575
               

               
Cow position:
               
chr27:18688455-18688625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
406-575
               

               
Cow position:
               
chr27:26118453-26118284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
411-570
               

               
Cow position:
               
chr27:24303895-24303732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
414-567
               

               
Cow position:
               
chr27:11208612-11208762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
421-573
               

               
Cow position:
               
chr27:232492-232340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
428-575
               

               
Cow position:
               
chr27:17908328-17908474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
436-573
               

               
Cow position:
               
chr27:20266302-20266439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
436-575
               

               
Cow position:
               
chr27:9956508-9956647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
438-575
               

               
Cow position:
               
chr27:22237045-22236909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
439-567
               

               
Cow position:
               
chr27:24726108-24726236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
439-575
               

               
Cow position:
               
chr27:19805776-19805909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
439-575
               

               
Cow position:
               
chr27:22583667-22583530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
444-575
               

               
Cow position:
               
chr27:31183491-31183358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
445-575
               

               
Cow position:
               
chr27:26317980-26317850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
445-575
               

               
Cow position:
               
chr27:31157726-31157597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
451-567
               

               
Cow position:
               
chr27:26467651-26467766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
454-571
               

               
Cow position:
               
chr27:13181810-13181694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
457-575
               

               
Cow position:
               
chr27:27012601-27012483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.