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Cow genome map

           
Conread name:
           
rcmu27_f11.y1
        

               
Conread position:
               
132-278
               

               
Cow position:
               
chr28:12934017-12933873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
142-459
               

               
Cow position:
               
chr28:2738062-2737745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 140
               

               
Conread position:
               
147-302
               

               
Cow position:
               
chr28:16879509-16879362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-361
               

               
Cow position:
               
chr28:13242065-13241855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
190, 27
               

               
Conread position:
               
147-362
               

               
Cow position:
               
chr28:24996829-24996615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
147-417
               

               
Cow position:
               
chr28:3751078-3751333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
189, 16
               

               
Conread position:
               
147-449
               

               
Cow position:
               
chr28:24646299-24646590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
147-508
               

               
Cow position:
               
chr28:13176920-13176579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
147-512
               

               
Cow position:
               
chr28:6059714-6059355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
147-534
               

               
Cow position:
               
chr28:5817606-5817979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 27
               

               
Conread position:
               
147-546
               

               
Cow position:
               
chr28:20313034-20313423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
147-554
               

               
Cow position:
               
chr28:15601023-15601432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
147-567
               

               
Cow position:
               
chr28:4282733-4282323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr28:11527497-11527085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
187, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr28:15263966-15263544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr28:16211338-16210927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr28:20124544-20124955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
210, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr28:21104088-21103646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr28:22332308-22332705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
147-575
               

               
Cow position:
               
chr28:22345778-22346199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
148-573
               

               
Cow position:
               
chr28:27218080-27218497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
148-575
               

               
Cow position:
               
chr28:25056731-25057133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
149-575
               

               
Cow position:
               
chr28:2898756-2899172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 25
               

               
Conread position:
               
152-365
               

               
Cow position:
               
chr28:3105001-3105226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
75, 221
               

               
Conread position:
               
154-530
               

               
Cow position:
               
chr28:28163856-28164217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
185, 95
               

               
Conread position:
               
155-575
               

               
Cow position:
               
chr28:14997827-14998238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
158-574
               

               
Cow position:
               
chr28:5144758-5144341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 162
               

               
Conread position:
               
158-575
               

               
Cow position:
               
chr28:4884499-4884079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
8, 122
               

               
Conread position:
               
158-575
               

               
Cow position:
               
chr28:8347503-8347908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 78
               

               
Conread position:
               
160-575
               

               
Cow position:
               
chr28:5437319-5436912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
161-504
               

               
Cow position:
               
chr28:7228614-7228283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 54
               

               
Conread position:
               
162-575
               

               
Cow position:
               
chr28:5236831-5236421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 128
               

               
Conread position:
               
162-575
               

               
Cow position:
               
chr28:8787319-8787713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 67
               

               
Conread position:
               
163-337
               

               
Cow position:
               
chr28:13371396-13371227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
163-410
               

               
Cow position:
               
chr28:16364196-16363953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
163-417
               

               
Cow position:
               
chr28:5773414-5773655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
163-520
               

               
Cow position:
               
chr28:3914484-3914839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
163-533
               

               
Cow position:
               
chr28:14649122-14649476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
176, 122
               

               
Conread position:
               
163-573
               

               
Cow position:
               
chr28:5203974-5204362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
171, 11
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr28:10744984-10745389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr28:11585434-11585035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
163-575
               

               
Cow position:
               
chr28:31841566-31841173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
164-537
               

               
Cow position:
               
chr28:19222370-19222013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
165-293
               

               
Cow position:
               
chr28:8629000-8628873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
165-358
               

               
Cow position:
               
chr28:7684901-7684713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
148, 9
               

               
Conread position:
               
165-365
               

               
Cow position:
               
chr28:7980642-7980444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
165-507
               

               
Cow position:
               
chr28:2862638-2862977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-526
               

               
Cow position:
               
chr28:3078901-3078556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 9
               

               
Conread position:
               
165-530
               

               
Cow position:
               
chr28:11752368-11752009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
165-531
               

               
Cow position:
               
chr28:25249132-25249487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
172, 12
               

               
Conread position:
               
165-534
               

               
Cow position:
               
chr28:10606843-10606498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
105, 9
               

               
Conread position:
               
165-534
               

               
Cow position:
               
chr28:25762806-25763157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 9
               

               
Conread position:
               
165-567
               

               
Cow position:
               
chr28:31648849-31649238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
142, 95
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr28:9426565-9426178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
171, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr28:10053562-10053155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr28:11884746-11884354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
165-575
               

               
Cow position:
               
chr28:12964354-12964756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
177, 9
               

               
Conread position:
               
168-355
               

               
Cow position:
               
chr28:10478564-10478376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
169, 81
               

               
Conread position:
               
171-440
               

               
Cow position:
               
chr28:3256575-3256840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
172-455
               

               
Cow position:
               
chr28:3714583-3714858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 134
               

               
Conread position:
               
173-511
               

               
Cow position:
               
chr28:18591054-18591383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
173-533
               

               
Cow position:
               
chr28:25806366-25806698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
166, 43
               

               
Conread position:
               
173-573
               

               
Cow position:
               
chr28:5074721-5074349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
133, 60
               

               
Conread position:
               
173-575
               

               
Cow position:
               
chr28:22371895-22371498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
174-284
               

               
Cow position:
               
chr28:25498719-25498605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-297
               

               
Cow position:
               
chr28:11759752-11759630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
174-301
               

               
Cow position:
               
chr28:8372255-8372384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
174-314
               

               
Cow position:
               
chr28:3480054-3480196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-320
               

               
Cow position:
               
chr28:2888214-2888360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
174-327
               

               
Cow position:
               
chr28:20760139-20759984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-337
               

               
Cow position:
               
chr28:5658338-5658497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
174-339
               

               
Cow position:
               
chr28:16354836-16354658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
174-341
               

               
Cow position:
               
chr28:32813214-32813044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
174-349
               

               
Cow position:
               
chr28:17738294-17738113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-351
               

               
Cow position:
               
chr28:11827278-11827451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
174-355
               

               
Cow position:
               
chr28:10888448-10888631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
174-356
               

               
Cow position:
               
chr28:8348868-8348684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
174-357
               

               
Cow position:
               
chr28:17316643-17316836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 169
               

               
Conread position:
               
174-357
               

               
Cow position:
               
chr28:18717338-18717154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr28:5188617-5188435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
162, 79
               

               
Conread position:
               
174-358
               

               
Cow position:
               
chr28:11451682-11451494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
174-363
               

               
Cow position:
               
chr28:4880479-4880293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
163, 103
               

               
Conread position:
               
174-364
               

               
Cow position:
               
chr28:26269116-26269305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
152, 75
               

               
Conread position:
               
174-365
               

               
Cow position:
               
chr28:3077777-3077966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
163, 73
               

               
Conread position:
               
174-369
               

               
Cow position:
               
chr28:7590397-7590199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
162, 114
               

               
Conread position:
               
174-371
               

               
Cow position:
               
chr28:14234757-14234946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
174-373
               

               
Cow position:
               
chr28:17029931-17029737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
157, 69
               

               
Conread position:
               
174-382
               

               
Cow position:
               
chr28:16243974-16243765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
174-385
               

               
Cow position:
               
chr28:34082237-34082020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
174-387
               

               
Cow position:
               
chr28:8656951-8656739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
162, 6
               

               
Conread position:
               
174-387
               

               
Cow position:
               
chr28:13447493-13447697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
164, 59
               

               
Conread position:
               
174-389
               

               
Cow position:
               
chr28:22132711-22132930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
159, 62
               

               
Conread position:
               
174-399
               

               
Cow position:
               
chr28:2905365-2905576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
165, 101
               

               
Conread position:
               
174-403
               

               
Cow position:
               
chr28:6861739-6861960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
174-403
               

               
Cow position:
               
chr28:27428537-27428752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
174-406
               

               
Cow position:
               
chr28:13607671-13607897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
174-417
               

               
Cow position:
               
chr28:4022167-4022407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
174-429
               

               
Cow position:
               
chr28:16253073-16252825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
164, 73
               

               
Conread position:
               
174-442
               

               
Cow position:
               
chr28:23775830-23776101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
174-454
               

               
Cow position:
               
chr28:22170933-22170654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
161, 191
               

               
Conread position:
               
174-461
               

               
Cow position:
               
chr28:4587881-4588160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
174-462
               

               
Cow position:
               
chr28:12758724-12758436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
55, 188
               

               
Conread position:
               
174-462
               

               
Cow position:
               
chr28:22485033-22485317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 6
               

               
Conread position:
               
174-471
               

               
Cow position:
               
chr28:25070901-25071192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
174-479
               

               
Cow position:
               
chr28:10529698-10529409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
174-484
               

               
Cow position:
               
chr28:21380659-21380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
174-488
               

               
Cow position:
               
chr28:5792488-5792798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
174-488
               

               
Cow position:
               
chr28:8408524-8408824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
174-497
               

               
Cow position:
               
chr28:13267566-13267888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
174-502
               

               
Cow position:
               
chr28:21502179-21502501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
101, 113
               

               
Conread position:
               
174-503
               

               
Cow position:
               
chr28:11786924-11786612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
174-506
               

               
Cow position:
               
chr28:4188318-4188662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
11, 55
               

               
Conread position:
               
174-507
               

               
Cow position:
               
chr28:21598469-21598141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
174-511
               

               
Cow position:
               
chr28:4841612-4841277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
23, 109
               

               
Conread position:
               
174-512
               

               
Cow position:
               
chr28:30327297-30326977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
174-519
               

               
Cow position:
               
chr28:12619347-12619696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 106
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr28:7549278-7548936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 107
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr28:26684897-26685233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
50, 103
               

               
Conread position:
               
174-520
               

               
Cow position:
               
chr28:26922580-26922246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
157, 89
               

               
Conread position:
               
174-523
               

               
Cow position:
               
chr28:14933746-14934083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
174-525
               

               
Cow position:
               
chr28:15044070-15043735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
162, 21
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr28:3144107-3143750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 101
               

               
Conread position:
               
174-526
               

               
Cow position:
               
chr28:16085109-16085452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 53
               

               
Conread position:
               
174-527
               

               
Cow position:
               
chr28:33163683-33163338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr28:19080063-19079710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
51, 182
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr28:26220046-26220391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr28:33051805-33052169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
174-533
               

               
Cow position:
               
chr28:34878188-34877847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
76, 197
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr28:5931138-5931485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
161, 67
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr28:11426761-11426409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr28:25701076-25700729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
165, 15
               

               
Conread position:
               
174-534
               

               
Cow position:
               
chr28:33036681-33036339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
174-536
               

               
Cow position:
               
chr28:29199511-29199868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
174-537
               

               
Cow position:
               
chr28:5771154-5771501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
178, 76
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr28:8022326-8021962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
174-538
               

               
Cow position:
               
chr28:19026218-19025865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
174-539
               

               
Cow position:
               
chr28:22321206-22321557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-542
               

               
Cow position:
               
chr28:25596417-25596772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
165, 112
               

               
Conread position:
               
174-552
               

               
Cow position:
               
chr28:10172629-10172268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-560
               

               
Cow position:
               
chr28:23793518-23793152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
244, 110
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr28:4308114-4307727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 45
               

               
Conread position:
               
174-567
               

               
Cow position:
               
chr28:23530651-23531032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr28:9636672-9636289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
63, 115
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr28:11423019-11422646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
165, 12
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr28:34230014-34230400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr28:9099719-9100101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr28:16346742-16346364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
163, 101
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr28:26340121-26340506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
70, 143
               

               
Conread position:
               
174-573
               

               
Cow position:
               
chr28:34442979-34442584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 171
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr28:14657485-14657889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
123, 114
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr28:15272476-15272097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr28:23459929-23460317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
69, 187
               

               
Conread position:
               
174-574
               

               
Cow position:
               
chr28:25727162-25727546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
347, 97
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:1099857-1099503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
155, 73
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:3024127-3023742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
154, 104
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:3493000-3492613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:4070753-4071135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 102
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:4914317-4913918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
50, 193
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:7268151-7267775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:7698198-7697805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:9285593-9285203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:10616167-10615773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 67
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:12430394-12430781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 70
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:12951217-12951590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:13474090-13474473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
163, 67
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:14151019-14151400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
101, 133
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:16204548-16204156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:21844740-21845128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
52, 115
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:21868236-21868631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:30293805-30293411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
174-575
               

               
Cow position:
               
chr28:30303410-30303034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
175-304
               

               
Cow position:
               
chr28:10295975-10296112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
175-358
               

               
Cow position:
               
chr28:9108227-9108416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
175-365
               

               
Cow position:
               
chr28:19222812-19222621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
163, 187
               

               
Conread position:
               
175-378
               

               
Cow position:
               
chr28:25424517-25424310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
175-518
               

               
Cow position:
               
chr28:11818175-11817844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
175-531
               

               
Cow position:
               
chr28:21355010-21355364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 94
               

               
Conread position:
               
175-538
               

               
Cow position:
               
chr28:6971554-6971204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
335, 58
               

               
Conread position:
               
175-538
               

               
Cow position:
               
chr28:31110220-31109861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 190
               

               
Conread position:
               
175-573
               

               
Cow position:
               
chr28:18790796-18791206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 113
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr28:3745987-3746371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr28:7512806-7512407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr28:26743407-26743805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
109, 72
               

               
Conread position:
               
175-575
               

               
Cow position:
               
chr28:28766124-28765726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 104
               

               
Conread position:
               
176-330
               

               
Cow position:
               
chr28:21129335-21129187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
176-358
               

               
Cow position:
               
chr28:16441174-16441350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
176-358
               

               
Cow position:
               
chr28:28076621-28076440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
161, 60
               

               
Conread position:
               
176-369
               

               
Cow position:
               
chr28:15375039-15374841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
176-374
               

               
Cow position:
               
chr28:9390578-9390378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
68, 101
               

               
Conread position:
               
176-379
               

               
Cow position:
               
chr28:7607014-7607222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 114
               

               
Conread position:
               
176-383
               

               
Cow position:
               
chr28:10642231-10642025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 124
               

               
Conread position:
               
176-385
               

               
Cow position:
               
chr28:23621334-23621539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
153, 99
               

               
Conread position:
               
176-445
               

               
Cow position:
               
chr28:5904522-5904779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 49
               

               
Conread position:
               
176-460
               

               
Cow position:
               
chr28:7751514-7751239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 114
               

               
Conread position:
               
176-486
               

               
Cow position:
               
chr28:16686819-16687114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
176-495
               

               
Cow position:
               
chr28:23675930-23676235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 47
               

               
Conread position:
               
176-507
               

               
Cow position:
               
chr28:23007939-23007621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
161, 51
               

               
Conread position:
               
176-538
               

               
Cow position:
               
chr28:16109731-16110077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
160, 71
               

               
Conread position:
               
176-560
               

               
Cow position:
               
chr28:16386719-16386360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 52
               

               
Conread position:
               
176-560
               

               
Cow position:
               
chr28:26533329-26533705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
53, 184
               

               
Conread position:
               
176-567
               

               
Cow position:
               
chr28:34430640-34430257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 116
               

               
Conread position:
               
176-568
               

               
Cow position:
               
chr28:11687246-11686851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
176-571
               

               
Cow position:
               
chr28:18625009-18625407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 194
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr28:1837777-1838170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr28:17638080-17637687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
242, 109
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr28:22323052-22323433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
61, 114
               

               
Conread position:
               
176-575
               

               
Cow position:
               
chr28:24672060-24672442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
185, 42
               

               
Conread position:
               
177-323
               

               
Cow position:
               
chr28:3161281-3161138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
177-361
               

               
Cow position:
               
chr28:26784679-26784492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
177-424
               

               
Cow position:
               
chr28:7503626-7503872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 115
               

               
Conread position:
               
177-546
               

               
Cow position:
               
chr28:12946725-12947097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 200
               

               
Conread position:
               
178-361
               

               
Cow position:
               
chr28:26103504-26103681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
159, 65
               

               
Conread position:
               
178-491
               

               
Cow position:
               
chr28:18934244-18934547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
161, 93
               

               
Conread position:
               
178-575
               

               
Cow position:
               
chr28:25973318-25973716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
179-358
               

               
Cow position:
               
chr28:25805462-25805644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 110
               

               
Conread position:
               
179-500
               

               
Cow position:
               
chr28:7723606-7723288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 113
               

               
Conread position:
               
179-507
               

               
Cow position:
               
chr28:30842365-30842679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
228, 46
               

               
Conread position:
               
179-539
               

               
Cow position:
               
chr28:29434635-29434289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
179-573
               

               
Cow position:
               
chr28:7144578-7144972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
157, 109
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr28:751014-751402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 182
               

               
Conread position:
               
179-575
               

               
Cow position:
               
chr28:29416927-29416551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 100
               

               
Conread position:
               
180-480
               

               
Cow position:
               
chr28:25282995-25283276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
180-531
               

               
Cow position:
               
chr28:23410533-23410192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
159, 56
               

               
Conread position:
               
181-378
               

               
Cow position:
               
chr28:2124222-2124416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
184-370
               

               
Cow position:
               
chr28:22739595-22739775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
153, 30
               

               
Conread position:
               
185-575
               

               
Cow position:
               
chr28:19054812-19055191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
186-509
               

               
Cow position:
               
chr28:5128933-5128617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
188-382
               

               
Cow position:
               
chr28:4057785-4057976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
189-508
               

               
Cow position:
               
chr28:14512325-14512643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
148, 42
               

               
Conread position:
               
189-573
               

               
Cow position:
               
chr28:5224512-5224876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
190-485
               

               
Cow position:
               
chr28:1810945-1810655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
190-575
               

               
Cow position:
               
chr28:27313948-27313555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
191-573
               

               
Cow position:
               
chr28:10844920-10845274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
186, 84
               

               
Conread position:
               
191-574
               

               
Cow position:
               
chr28:4158753-4159137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 101
               

               
Conread position:
               
191-575
               

               
Cow position:
               
chr28:4138868-4138493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 83
               

               
Conread position:
               
192-511
               

               
Cow position:
               
chr28:3169389-3169076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
194-525
               

               
Cow position:
               
chr28:7416204-7415883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
224, 69
               

               
Conread position:
               
195-570
               

               
Cow position:
               
chr28:4881440-4881074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
10, 175
               

               
Conread position:
               
195-575
               

               
Cow position:
               
chr28:10669380-10669761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
42, 56
               

               
Conread position:
               
196-417
               

               
Cow position:
               
chr28:118248-118031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
197-575
               

               
Cow position:
               
chr28:4835038-4834669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
199-370
               

               
Cow position:
               
chr28:23724646-23724479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
199-448
               

               
Cow position:
               
chr28:22279383-22279150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
199-574
               

               
Cow position:
               
chr28:30937856-30937505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
200-575
               

               
Cow position:
               
chr28:26982936-26982562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
32, 175
               

               
Conread position:
               
204-373
               

               
Cow position:
               
chr28:19023947-19024125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
204-575
               

               
Cow position:
               
chr28:11866855-11866494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
207-575
               

               
Cow position:
               
chr28:4016357-4016700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
303, 12
               

               
Conread position:
               
207-575
               

               
Cow position:
               
chr28:22308467-22308818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
210-416
               

               
Cow position:
               
chr28:28903846-28903645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
210-533
               

               
Cow position:
               
chr28:2132102-2131789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
212-555
               

               
Cow position:
               
chr28:25728028-25728348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
212-570
               

               
Cow position:
               
chr28:11762524-11762867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
242, 63
               

               
Conread position:
               
212-575
               

               
Cow position:
               
chr28:1383452-1383098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
208, 75
               

               
Conread position:
               
213-575
               

               
Cow position:
               
chr28:20409216-20409565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
124, 65
               

               
Conread position:
               
214-575
               

               
Cow position:
               
chr28:26264628-26265004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
219-538
               

               
Cow position:
               
chr28:2752666-2752354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 8
               

               
Conread position:
               
219-575
               

               
Cow position:
               
chr28:21363576-21363917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
220-575
               

               
Cow position:
               
chr28:13245380-13245738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
224-567
               

               
Cow position:
               
chr28:3406595-3406246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
224-573
               

               
Cow position:
               
chr28:4643928-4643598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
229-573
               

               
Cow position:
               
chr28:11798962-11798604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
229-575
               

               
Cow position:
               
chr28:4440143-4440473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
229-575
               

               
Cow position:
               
chr28:24693115-24693455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
107, 84
               

               
Conread position:
               
232-575
               

               
Cow position:
               
chr28:8358747-8359074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
235-575
               

               
Cow position:
               
chr28:10906923-10907260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
236-568
               

               
Cow position:
               
chr28:24082117-24082437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
238-510
               

               
Cow position:
               
chr28:30746879-30746617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
245-538
               

               
Cow position:
               
chr28:27161474-27161187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
247-495
               

               
Cow position:
               
chr28:18186412-18186653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
247-573
               

               
Cow position:
               
chr28:10057734-10057413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
251-575
               

               
Cow position:
               
chr28:19262727-19262410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
254-570
               

               
Cow position:
               
chr28:3449164-3449478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 107
               

               
Conread position:
               
260-570
               

               
Cow position:
               
chr28:5577390-5577701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
260-575
               

               
Cow position:
               
chr28:11346614-11346315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
267-575
               

               
Cow position:
               
chr28:32593772-32593459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
268-575
               

               
Cow position:
               
chr28:11079185-11079474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
271-575
               

               
Cow position:
               
chr28:6358529-6358236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
277-567
               

               
Cow position:
               
chr28:19564342-19564069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
279-521
               

               
Cow position:
               
chr28:5166654-5166890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 84
               

               
Conread position:
               
279-573
               

               
Cow position:
               
chr28:3011385-3011095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
280-575
               

               
Cow position:
               
chr28:5199711-5200001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
281-575
               

               
Cow position:
               
chr28:12933841-12933559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
149, 49
               

               
Conread position:
               
282-575
               

               
Cow position:
               
chr28:12363270-12362986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 82
               

               
Conread position:
               
286-575
               

               
Cow position:
               
chr28:31223671-31223383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
287-567
               

               
Cow position:
               
chr28:11307612-11307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
133, 52
               

               
Conread position:
               
293-569
               

               
Cow position:
               
chr28:11197771-11197504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 47
               

               
Conread position:
               
295-575
               

               
Cow position:
               
chr28:17071237-17071514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
301-575
               

               
Cow position:
               
chr28:11559724-11559459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
312-575
               

               
Cow position:
               
chr28:5139076-5138825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
333-575
               

               
Cow position:
               
chr28:7132157-7131917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
333-575
               

               
Cow position:
               
chr28:23638617-23638846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
336-534
               

               
Cow position:
               
chr28:13090579-13090390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
336-575
               

               
Cow position:
               
chr28:5630033-5630273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
345-575
               

               
Cow position:
               
chr28:17680568-17680799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
357-575
               

               
Cow position:
               
chr28:11828997-11828785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
360-538
               

               
Cow position:
               
chr28:7498186-7498007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
364-573
               

               
Cow position:
               
chr28:20397403-20397196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
367-574
               

               
Cow position:
               
chr28:26531307-26531105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr28:3445511-3445306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr28:3726242-3726034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 147
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr28:5254843-5255045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr28:9705622-9705830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
156, 75
               

               
Conread position:
               
367-575
               

               
Cow position:
               
chr28:23262483-23262276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
369-575
               

               
Cow position:
               
chr28:11398825-11398620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
370-575
               

               
Cow position:
               
chr28:4013054-4013257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 159
               

               
Conread position:
               
374-575
               

               
Cow position:
               
chr28:19128193-19127998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
375-575
               

               
Cow position:
               
chr28:3200436-3200636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
375-575
               

               
Cow position:
               
chr28:11058064-11057870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
376-534
               

               
Cow position:
               
chr28:23047598-23047754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
377-573
               

               
Cow position:
               
chr28:7350633-7350825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr28:4937263-4937065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr28:8304226-8304416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 60
               

               
Conread position:
               
377-575
               

               
Cow position:
               
chr28:27721682-27721870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
389-567
               

               
Cow position:
               
chr28:6563906-6563728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 8
               

               
Conread position:
               
390-575
               

               
Cow position:
               
chr28:2801217-2801401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
5, 89
               

               
Conread position:
               
390-575
               

               
Cow position:
               
chr28:15362571-15362752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
393-575
               

               
Cow position:
               
chr28:4163584-4163406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
117, 27
               

               
Conread position:
               
394-570
               

               
Cow position:
               
chr28:26826219-26826391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
394-575
               

               
Cow position:
               
chr28:30902122-30902295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
395-571
               

               
Cow position:
               
chr28:6283491-6283319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
395-575
               

               
Cow position:
               
chr28:5673872-5674046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
105, 133
               

               
Conread position:
               
396-575
               

               
Cow position:
               
chr28:8259626-8259806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
397-575
               

               
Cow position:
               
chr28:18608369-18608191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
405-575
               

               
Cow position:
               
chr28:19994939-19994772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
405-575
               

               
Cow position:
               
chr28:25827724-25827554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
411-575
               

               
Cow position:
               
chr28:659282-659113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
99, 139
               

               
Conread position:
               
412-575
               

               
Cow position:
               
chr28:10252903-10252741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
420-575
               

               
Cow position:
               
chr28:2825441-2825596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
420-575
               

               
Cow position:
               
chr28:32014806-32014959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
421-575
               

               
Cow position:
               
chr28:8716365-8716206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
434-573
               

               
Cow position:
               
chr28:2077536-2077673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
436-567
               

               
Cow position:
               
chr28:19118007-19118138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
437-575
               

               
Cow position:
               
chr28:16200704-16200566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
439-575
               

               
Cow position:
               
chr28:8656125-8655992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
444-573
               

               
Cow position:
               
chr28:4022719-4022848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
444-573
               

               
Cow position:
               
chr28:6301127-6301256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
444-575
               

               
Cow position:
               
chr28:11562200-11562069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
444-575
               

               
Cow position:
               
chr28:17620315-17620185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
446-575
               

               
Cow position:
               
chr28:34830202-34830331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
454-575
               

               
Cow position:
               
chr28:3311168-3311047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.