Cow genome map

Conread name: rcmu31_n5.y1

Conread position: 1-298
Cow position: chr12:6164226-6163947 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 206
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 26, 13

Conread position: 1-347
Cow position: chr12:37514502-37514149 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 159

Conread position: 42-307
Cow position: chr12:9914629-9914890 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 50-287
Cow position: chr12:25805285-25805050 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 30

Conread position: 50-310
Cow position: chr12:18103768-18103509 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 98

Conread position: 50-320
Cow position: chr12:14131915-14131657 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 54-290
Cow position: chr12:18943806-18943574 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 54-294
Cow position: chr12:17881714-17881949 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 54-316
Cow position: chr12:30805706-30805971 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 161, 33

Conread position: 54-336
Cow position: chr12:19258131-19258406 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 19

Conread position: 54-347
Cow position: chr12:25561219-25561504 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 46

Conread position: 54-347
Cow position: chr12:30919269-30919572 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 21

Conread position: 55-301
Cow position: chr12:7299608-7299365 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 45

Conread position: 55-347
Cow position: chr12:15122173-15122463 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 44

Conread position: 75-331
Cow position: chr12:22881925-22882182 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 5

Conread position: 75-347
Cow position: chr12:13988242-13988512 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 207, 22

Conread position: 76-222
Cow position: chr12:26317334-26317481 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 27

Conread position: 76-293
Cow position: chr12:5714500-5714716 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 21

Conread position: 76-347
Cow position: chr12:11587645-11587907 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 76-347
Cow position: chr12:36544778-36544507 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 24

Conread position: 77-325
Cow position: chr12:35669600-35669340 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 22

Conread position: 79-256
Cow position: chr12:34673466-34673290 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 57, 20

Conread position: 79-281
Cow position: chr12:24116488-24116288 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 49, 16

Conread position: 79-287
Cow position: chr12:30605290-30605085 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 55, 18

Conread position: 79-303
Cow position: chr12:28471513-28471744 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 111, 21

Conread position: 79-347
Cow position: chr12:20777048-20776791 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 20

Conread position: 79-347
Cow position: chr12:23574639-23574908 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 177
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 223, 6

Conread position: 82-281
Cow position: chr12:42285845-42286045 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 60

Conread position: 85-323
Cow position: chr12:32714925-32715158 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 51, 14

Conread position: 90-297
Cow position: chr12:5609626-5609421 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 93

Conread position: 92-336
Cow position: chr12:15429710-15429467 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 188, 230

Conread position: 94-265
Cow position: chr12:9791868-9791709 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 44, 123

Conread position: 96-255
Cow position: chr12:6235174-6235338 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 97-290
Cow position: chr12:24211304-24211490 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 97-298
Cow position: chr12:3950455-3950252 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 97-303
Cow position: chr12:33323603-33323398 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 169, 41

Conread position: 97-310
Cow position: chr12:26575778-26576000 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 183

Conread position: 97-323
Cow position: chr12:3880088-3879864 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 97-325
Cow position: chr12:19507523-19507753 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 193

Conread position: 97-336
Cow position: chr12:16670157-16670396 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 162

Conread position: 97-347
Cow position: chr12:22515843-22515600 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 29

Conread position: 98-243
Cow position: chr12:18550771-18550918 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 24

Conread position: 98-266
Cow position: chr12:11090315-11090476 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 98-270
Cow position: chr12:8868984-8868818 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 100

Conread position: 98-272
Cow position: chr12:18577731-18577906 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 145
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 34, 43

Conread position: 98-276
Cow position: chr12:6489097-6488923 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 32, 88

Conread position: 98-276
Cow position: chr12:26223096-26222919 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 41, 72

Conread position: 98-280
Cow position: chr12:5905947-5906130 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 35, 0

Conread position: 98-281
Cow position: chr12:1889687-1889502 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 69

Conread position: 98-281
Cow position: chr12:17001155-17001333 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 98-281
Cow position: chr12:28582611-28582435 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 29, 42

Conread position: 98-281
Cow position: chr12:41215991-41215810 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 101

Conread position: 98-286
Cow position: chr12:38454803-38454984 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 98-287
Cow position: chr12:42784200-42784393 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 34, 0

Conread position: 98-288
Cow position: chr12:1333121-1333312 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 171

Conread position: 98-288
Cow position: chr12:30438134-30438317 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 98-294
Cow position: chr12:31429677-31429483 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 91

Conread position: 98-295
Cow position: chr12:27037558-27037361 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 164
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 98-298
Cow position: chr12:4341847-4341652 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 98-298
Cow position: chr12:6410841-6410644 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 124, 44

Conread position: 98-298
Cow position: chr12:6485320-6485120 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 39, 86

Conread position: 98-298
Cow position: chr12:41473980-41474181 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 48

Conread position: 98-303
Cow position: chr12:37170050-37169850 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 0

Conread position: 98-307
Cow position: chr12:34161309-34161512 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 98-309
Cow position: chr12:30753616-30753820 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 98-310
Cow position: chr12:11836124-11836339 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 98-310
Cow position: chr12:18583100-18582888 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 56

Conread position: 98-313
Cow position: chr12:19502531-19502323 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 98-316
Cow position: chr12:29969473-29969691 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 192, 32

Conread position: 98-317
Cow position: chr12:15530951-15531163 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 0

Conread position: 98-317
Cow position: chr12:27803159-27802938 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 18

Conread position: 98-319
Cow position: chr12:18766085-18765858 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 98-320
Cow position: chr12:2711389-2711613 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 98

Conread position: 98-320
Cow position: chr12:31959780-31959994 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 206, 44

Conread position: 98-320
Cow position: chr12:45820475-45820253 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 44

Conread position: 98-321
Cow position: chr12:26217933-26217708 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 40

Conread position: 98-323
Cow position: chr12:29770680-29770461 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 32

Conread position: 98-331
Cow position: chr12:6720216-6720451 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 177

Conread position: 98-331
Cow position: chr12:7000711-7000482 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 133, 0

Conread position: 98-332
Cow position: chr12:12304278-12304510 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 100

Conread position: 98-336
Cow position: chr12:9143280-9143514 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 14

Conread position: 98-336
Cow position: chr12:9766987-9766751 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 207

Conread position: 98-341
Cow position: chr12:3623587-3623831 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 42

Conread position: 98-343
Cow position: chr12:17269692-17269935 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 206

Conread position: 98-344
Cow position: chr12:24032390-24032626 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 98-344
Cow position: chr12:37770769-37771001 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 17

Conread position: 98-345
Cow position: chr12:31228467-31228719 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 176, 31

Conread position: 98-346
Cow position: chr12:5635554-5635315 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 18, 0

Conread position: 98-346
Cow position: chr12:22485711-22485950 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 184, 38

Conread position: 98-346
Cow position: chr12:33129155-33129391 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 98-347
Cow position: chr12:4596358-4596611 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 32

Conread position: 98-347
Cow position: chr12:5631989-5631746 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 39, 100

Conread position: 98-347
Cow position: chr12:7110093-7110346 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 184, 39

Conread position: 98-347
Cow position: chr12:8943327-8943077 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 186, 36

Conread position: 98-347
Cow position: chr12:11659818-11660065 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 130

Conread position: 98-347
Cow position: chr12:15089406-15089654 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 32, 133

Conread position: 98-347
Cow position: chr12:24152230-24152480 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 37

Conread position: 98-347
Cow position: chr12:25917376-25917138 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 204, 25

Conread position: 98-347
Cow position: chr12:30745608-30745854 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 93

Conread position: 98-347
Cow position: chr12:33851251-33851494 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 86

Conread position: 98-347
Cow position: chr12:36790918-36790675 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 98-347
Cow position: chr12:38774346-38774107 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 32, 0

Conread position: 98-347
Cow position: chr12:40910396-40910147 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 19

Conread position: 99-272
Cow position: chr12:34466113-34465938 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 43

Conread position: 99-275
Cow position: chr12:43942365-43942550 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 99-281
Cow position: chr12:19691340-19691159 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 112

Conread position: 99-281
Cow position: chr12:47804048-47804231 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 132

Conread position: 99-286
Cow position: chr12:3197164-3197348 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 99-288
Cow position: chr12:39465470-39465660 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 186

Conread position: 99-293
Cow position: chr12:17031509-17031702 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 168, 89

Conread position: 99-297
Cow position: chr12:17774687-17774885 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 46

Conread position: 99-303
Cow position: chr12:35771125-35770924 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 99-308
Cow position: chr12:31532516-31532304 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 109

Conread position: 99-314
Cow position: chr12:6210264-6210054 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 39

Conread position: 99-320
Cow position: chr12:44595917-44595699 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 43, 38

Conread position: 99-330
Cow position: chr12:33319774-33319539 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 54

Conread position: 99-346
Cow position: chr12:15703609-15703358 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 115

Conread position: 99-346
Cow position: chr12:33976094-33976340 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 174, 37

Conread position: 99-347
Cow position: chr12:7884788-7884542 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 0

Conread position: 99-347
Cow position: chr12:18518560-18518810 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 209

Conread position: 99-347
Cow position: chr12:19261086-19261333 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 186

Conread position: 99-347
Cow position: chr12:21780058-21780302 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 175, 37

Conread position: 99-347
Cow position: chr12:30590661-30590907 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 101, 38

Conread position: 100-345
Cow position: chr12:7902908-7902669 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 88, 28

Conread position: 101-251
Cow position: chr12:18023539-18023380 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 102-263
Cow position: chr12:731040-730883 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 58

Conread position: 102-272
Cow position: chr12:6469166-6468994 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 0

Conread position: 102-275
Cow position: chr12:30170565-30170737 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 97, 91

Conread position: 102-279
Cow position: chr12:47194125-47193951 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 0

Conread position: 102-281
Cow position: chr12:18020754-18020932 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 41, 14

Conread position: 102-281
Cow position: chr12:30210379-30210558 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 28, 17

Conread position: 102-287
Cow position: chr12:33458042-33458229 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 94

Conread position: 102-293
Cow position: chr12:2813122-2813314 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 40, 0

Conread position: 102-295
Cow position: chr12:44203092-44202898 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 158
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 90

Conread position: 102-296
Cow position: chr12:25452551-25452357 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 35

Conread position: 102-297
Cow position: chr12:18421028-18420841 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 27, 41

Conread position: 102-300
Cow position: chr12:46120933-46120737 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 163
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 82, 34

Conread position: 102-301
Cow position: chr12:23855734-23855925 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 106

Conread position: 102-304
Cow position: chr12:17879407-17879203 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 24

Conread position: 102-310
Cow position: chr12:11056771-11056979 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 196

Conread position: 102-323
Cow position: chr12:45028249-45028465 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 110

Conread position: 102-336
Cow position: chr12:3371647-3371420 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 36, 106

Conread position: 102-343
Cow position: chr12:35241206-35240969 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 215, 32

Conread position: 102-347
Cow position: chr12:4719843-4720082 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 28, 9

Conread position: 102-347
Cow position: chr12:10942182-10942432 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 43

Conread position: 102-347
Cow position: chr12:19400920-19400678 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 56

Conread position: 102-347
Cow position: chr12:22285222-22284983 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 147, 50

Conread position: 102-347
Cow position: chr12:24663013-24663258 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 180, 19

Conread position: 102-347
Cow position: chr12:42879590-42879837 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 46

Conread position: 102-347
Cow position: chr12:44622251-44622498 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 26, 31

Conread position: 103-310
Cow position: chr12:48415618-48415411 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 82

Conread position: 103-335
Cow position: chr12:30662049-30661823 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 201, 19

Conread position: 103-344
Cow position: chr12:42254565-42254804 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 171, 74

Conread position: 103-347
Cow position: chr12:14222874-14223121 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 64

Conread position: 103-347
Cow position: chr12:26750061-26749812 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 155

Conread position: 103-347
Cow position: chr12:42966897-42967133 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 104-310
Cow position: chr12:37008805-37008602 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 195, 100

Conread position: 104-332
Cow position: chr12:41159490-41159713 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 210, 9

Conread position: 104-346
Cow position: chr12:42181239-42180991 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 215

Conread position: 104-347
Cow position: chr12:35368540-35368782 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 33

Conread position: 106-294
Cow position: chr12:18523464-18523659 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 82

Conread position: 106-298
Cow position: chr12:42685046-42684853 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 99

Conread position: 106-347
Cow position: chr12:17080159-17080404 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 36, 193

Conread position: 106-347
Cow position: chr12:32169440-32169684 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 86

Conread position: 107-281
Cow position: chr12:24043266-24043089 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 34

Conread position: 109-218
Cow position: chr12:28778394-28778502 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 109-276
Cow position: chr12:30819145-30819314 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 139
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 109-280
Cow position: chr12:18388384-18388217 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 84, 28

Conread position: 110-300
Cow position: chr12:39591740-39591544 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 34

Conread position: 111-269
Cow position: chr12:35378105-35378264 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 108

Conread position: 112-310
Cow position: chr12:6687798-6687992 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 77

Conread position: 114-347
Cow position: chr12:26777283-26777056 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 175
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 21, 92

Conread position: 115-279
Cow position: chr12:5554426-5554261 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 116-281
Cow position: chr12:3615911-3616072 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 67

Conread position: 117-347
Cow position: chr12:4768835-4769057 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 99

Conread position: 118-347
Cow position: chr12:16056947-16056717 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 183

Conread position: 120-347
Cow position: chr12:36261603-36261832 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 157, 195

Conread position: 121-341
Cow position: chr12:4008367-4008148 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 147, 30

Conread position: 124-288
Cow position: chr12:18514010-18513835 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 112, 47

Conread position: 124-297
Cow position: chr12:26151541-26151369 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 143, 7

Conread position: 124-336
Cow position: chr12:23644887-23644675 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 168

Conread position: 125-310
Cow position: chr12:4866735-4866922 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 126-319
Cow position: chr12:34148442-34148244 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 126-340
Cow position: chr12:5839738-5839527 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 189

Conread position: 126-347
Cow position: chr12:33948824-33949038 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 172
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 163, 0

Conread position: 127-312
Cow position: chr12:4594423-4594614 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 102, 16

Conread position: 127-345
Cow position: chr12:17252277-17252067 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 0

Conread position: 130-272
Cow position: chr12:15641183-15641041 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 121
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 70, 13

Conread position: 130-281
Cow position: chr12:45092369-45092521 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 127
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 8, 0

Conread position: 130-292
Cow position: chr12:6484067-6484223 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 133-347
Cow position: chr12:12232810-12233019 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 74

Conread position: 134-300
Cow position: chr12:12300843-12301010 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 143

Conread position: 135-318
Cow position: chr12:45168090-45167911 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 137-320
Cow position: chr12:44901192-44901371 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 138-325
Cow position: chr12:25444847-25445029 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 14

Conread position: 139-347
Cow position: chr12:6241252-6241462 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 165, 0

Conread position: 139-347
Cow position: chr12:29057320-29057528 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 167

Conread position: 140-281
Cow position: chr12:48287759-48287619 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 140-290
Cow position: chr12:24023868-24023718 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 140-291
Cow position: chr12:16605739-16605578 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 140-295
Cow position: chr12:46491342-46491192 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 140-301
Cow position: chr12:19274463-19274303 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 135
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 148, 67

Conread position: 140-301
Cow position: chr12:46464133-46463975 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 140-304
Cow position: chr12:36994182-36994016 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 153, 0

Conread position: 140-323
Cow position: chr12:4793131-4793315 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 162, 153

Conread position: 140-344
Cow position: chr12:37993798-37993587 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 142, 195

Conread position: 140-346
Cow position: chr12:9514295-9514505 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 185

Conread position: 140-347
Cow position: chr12:6188180-6187971 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 140, 152

Conread position: 140-347
Cow position: chr12:6754130-6754329 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 157, 0

Conread position: 140-347
Cow position: chr12:18123603-18123804 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 143, 0

Conread position: 141-286
Cow position: chr12:24273424-24273277 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 62

Conread position: 141-298
Cow position: chr12:4797235-4797391 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 133, 0

Conread position: 141-298
Cow position: chr12:15260698-15260853 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 132
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 119, 0

Conread position: 141-304
Cow position: chr12:25177661-25177500 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 149, 41

Conread position: 142-281
Cow position: chr12:9229564-9229425 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 142-288
Cow position: chr12:24167008-24166862 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 142-347
Cow position: chr12:29966043-29966243 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 46

Conread position: 143-347
Cow position: chr12:37255957-37256156 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 42

Conread position: 143-347
Cow position: chr12:45039044-45039245 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 159

Conread position: 144-291
Cow position: chr12:27357326-27357472 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 144-294
Cow position: chr12:15240800-15240648 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 117

Conread position: 144-325
Cow position: chr12:29779976-29779793 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 38

Conread position: 146-294
Cow position: chr12:7311320-7311470 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 150-320
Cow position: chr12:1766856-1767026 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 133, 57

Conread position: 155-265
Cow position: chr12:11333726-11333619 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 37

Conread position: 155-293
Cow position: chr12:34195758-34195623 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 155-302
Cow position: chr12:6139631-6139481 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 11

Conread position: 156-281
Cow position: chr12:45783766-45783641 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 156-347
Cow position: chr12:2734958-2734773 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 127, 0

Conread position: 158-345
Cow position: chr12:45723268-45723451 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 169, 39

Conread position: 159-304
Cow position: chr12:43854847-43854992 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 138, 44

Conread position: 159-345
Cow position: chr12:24437682-24437496 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 155, 149

Conread position: 160-347
Cow position: chr12:23714628-23714810 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 153

Conread position: 161-261
Cow position: chr12:19513070-19512970 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 84
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 161-346
Cow position: chr12:48578798-48578972 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 161-347
Cow position: chr12:14986704-14986885 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 106, 0

Conread position: 164-323
Cow position: chr12:27572282-27572122 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 166-347
Cow position: chr12:29731274-29731449 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 134, 148

Conread position: 167-347
Cow position: chr12:2964011-2964184 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 170-272
Cow position: chr12:19371926-19371824 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 170-347
Cow position: chr12:6480604-6480780 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 103, 128

Conread position: 173-286
Cow position: chr12:16434905-16434794 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 174-347
Cow position: chr12:29180641-29180812 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 111

Conread position: 174-347
Cow position: chr12:29316494-29316324 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 73, 146

Conread position: 177-281
Cow position: chr12:25198761-25198864 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 182-347
Cow position: chr12:4512474-4512313 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 187-310
Cow position: chr12:44542247-44542371 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 188-281
Cow position: chr12:18092454-18092547 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 188-310
Cow position: chr12:20439275-20439154 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 191-345
Cow position: chr12:44861275-44861121 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 109

Conread position: 191-347
Cow position: chr12:19272704-19272552 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 191-347
Cow position: chr12:38679034-38679186 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 193-347
Cow position: chr12:583523-583366 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 194-301
Cow position: chr12:25528572-25528465 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 92
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 194-325
Cow position: chr12:15790046-15790178 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 196-347
Cow position: chr12:4014443-4014284 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 199-347
Cow position: chr12:4008094-4007945 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 111

Conread position: 199-347
Cow position: chr12:24186497-24186339 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 84, 10

Conread position: 200-323
Cow position: chr12:7514807-7514932 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 201-290
Cow position: chr12:18796201-18796112 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 208-345
Cow position: chr12:1952800-1952669 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 215-336
Cow position: chr12:18978696-18978816 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 86

Show alignments to all cow chromosomes.