Cow genome map

Conread name: rcmu31_n5.y1

Conread position: 1-347
Cow position: chr15:11658317-11658670 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 40, 13

Conread position: 41-347
Cow position: chr15:275880-275556 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 7, 98

Conread position: 50-323
Cow position: chr15:21166214-21166490 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 23

Conread position: 50-329
Cow position: chr15:39090496-39090224 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 36, 45

Conread position: 50-341
Cow position: chr15:26158391-26158680 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 36, 45

Conread position: 51-304
Cow position: chr15:1297938-1297693 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 53-294
Cow position: chr15:13285220-13284983 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 33

Conread position: 54-277
Cow position: chr15:13387278-13387058 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 45

Conread position: 54-280
Cow position: chr15:40999870-41000093 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 19

Conread position: 54-311
Cow position: chr15:26911878-26912126 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 54-322
Cow position: chr15:4178738-4179007 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 73, 12

Conread position: 54-345
Cow position: chr15:38883350-38883057 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 33

Conread position: 54-347
Cow position: chr15:608343-608056 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 248, 33

Conread position: 66-297
Cow position: chr15:26718730-26718960 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 98

Conread position: 69-319
Cow position: chr15:14281736-14281487 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 69, 15

Conread position: 69-337
Cow position: chr15:31175984-31175711 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 58, 18

Conread position: 73-346
Cow position: chr15:36391856-36391585 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 123, 26

Conread position: 76-232
Cow position: chr15:21908114-21907960 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 76-290
Cow position: chr15:16307591-16307388 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 170
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 203, 23

Conread position: 76-314
Cow position: chr15:12655736-12655970 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 14

Conread position: 76-319
Cow position: chr15:12870686-12870925 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 23

Conread position: 76-323
Cow position: chr15:29331183-29330942 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 23

Conread position: 76-347
Cow position: chr15:30047364-30047641 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 23

Conread position: 79-310
Cow position: chr15:46563312-46563534 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 6

Conread position: 79-323
Cow position: chr15:10335932-10335689 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 56, 20

Conread position: 79-323
Cow position: chr15:42788972-42789214 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 21

Conread position: 79-347
Cow position: chr15:14576510-14576243 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 21

Conread position: 85-345
Cow position: chr15:22553367-22553626 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 14, 59

Conread position: 90-314
Cow position: chr15:32977680-32977904 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 193, 9

Conread position: 92-292
Cow position: chr15:1722685-1722885 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 33, 75

Conread position: 93-292
Cow position: chr15:16823101-16822904 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 6, 111

Conread position: 94-296
Cow position: chr15:28038938-28038740 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 163
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 42, 14

Conread position: 94-347
Cow position: chr15:43114560-43114805 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 108

Conread position: 95-262
Cow position: chr15:3726284-3726119 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 38

Conread position: 96-263
Cow position: chr15:35417468-35417631 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 96-276
Cow position: chr15:34751245-34751073 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 97-281
Cow position: chr15:37284614-37284429 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 36, 18

Conread position: 97-288
Cow position: chr15:27973059-27973250 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 170, 41

Conread position: 97-288
Cow position: chr15:41125412-41125604 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 32, 44

Conread position: 97-293
Cow position: chr15:20047729-20047551 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 97-336
Cow position: chr15:32234170-32234406 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 11, 103

Conread position: 97-346
Cow position: chr15:43626626-43626379 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 177, 40

Conread position: 97-347
Cow position: chr15:794856-795104 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 206

Conread position: 97-347
Cow position: chr15:8354202-8353954 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 187

Conread position: 97-347
Cow position: chr15:10442345-10442598 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 76

Conread position: 97-347
Cow position: chr15:29810276-29810038 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 97-347
Cow position: chr15:52317217-52316973 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 36, 144

Conread position: 98-221
Cow position: chr15:38877144-38877268 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 106
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 98-241
Cow position: chr15:18647535-18647396 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 110

Conread position: 98-250
Cow position: chr15:13515526-13515373 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 126
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 98-267
Cow position: chr15:26117674-26117514 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 98-271
Cow position: chr15:11011447-11011617 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 98-272
Cow position: chr15:14870901-14870728 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 111

Conread position: 98-272
Cow position: chr15:20351988-20351817 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 98-275
Cow position: chr15:17870128-17870302 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 92, 26

Conread position: 98-278
Cow position: chr15:24128189-24128009 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 111

Conread position: 98-279
Cow position: chr15:39326357-39326539 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 73

Conread position: 98-281
Cow position: chr15:48710895-48711078 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 114

Conread position: 98-281
Cow position: chr15:49922293-49922110 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 98-283
Cow position: chr15:43599347-43599163 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 98-289
Cow position: chr15:31043026-31042836 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 15

Conread position: 98-290
Cow position: chr15:22136843-22136657 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 100

Conread position: 98-290
Cow position: chr15:34207032-34207220 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 92

Conread position: 98-292
Cow position: chr15:9497342-9497535 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 38

Conread position: 98-292
Cow position: chr15:16908589-16908398 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 0

Conread position: 98-293
Cow position: chr15:44641054-44640862 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 101, 40

Conread position: 98-294
Cow position: chr15:16927939-16928131 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 98-294
Cow position: chr15:17337516-17337325 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 98-296
Cow position: chr15:51307522-51307718 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 145

Conread position: 98-297
Cow position: chr15:5657997-5657794 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 48

Conread position: 98-297
Cow position: chr15:14176342-14176539 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 40, 0

Conread position: 98-298
Cow position: chr15:5683298-5683109 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 98-298
Cow position: chr15:17100553-17100751 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 179, 40

Conread position: 98-298
Cow position: chr15:20487048-20487244 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 98-298
Cow position: chr15:27900351-27900551 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 92

Conread position: 98-298
Cow position: chr15:50302341-50302145 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 28, 43

Conread position: 98-299
Cow position: chr15:50322753-50322555 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 39

Conread position: 98-300
Cow position: chr15:2144973-2145180 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 27, 191

Conread position: 98-303
Cow position: chr15:22939167-22939371 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 19

Conread position: 98-307
Cow position: chr15:915688-915891 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 98-307
Cow position: chr15:16583540-16583740 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 98-308
Cow position: chr15:26919118-26919326 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 98-310
Cow position: chr15:9107193-9106984 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 154, 0

Conread position: 98-312
Cow position: chr15:5044325-5044529 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 98-313
Cow position: chr15:5726481-5726268 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 182, 39

Conread position: 98-319
Cow position: chr15:4694903-4694682 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 167

Conread position: 98-319
Cow position: chr15:39316676-39316903 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 211

Conread position: 98-321
Cow position: chr15:10456855-10457076 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 36, 53

Conread position: 98-323
Cow position: chr15:21821146-21820926 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 111

Conread position: 98-323
Cow position: chr15:35440918-35441143 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 29, 104

Conread position: 98-325
Cow position: chr15:21389011-21389232 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 206, 37

Conread position: 98-328
Cow position: chr15:19920177-19920403 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 153
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 117, 42

Conread position: 98-334
Cow position: chr15:22871763-22871534 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 185, 40

Conread position: 98-336
Cow position: chr15:41056047-41056288 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 23

Conread position: 98-344
Cow position: chr15:4295923-4295675 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 193

Conread position: 98-345
Cow position: chr15:23696753-23696987 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 114, 45

Conread position: 98-345
Cow position: chr15:39286255-39286496 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 216, 19

Conread position: 98-347
Cow position: chr15:1503063-1502826 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 114

Conread position: 98-347
Cow position: chr15:4138290-4138047 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 167
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 216, 39

Conread position: 98-347
Cow position: chr15:5158532-5158284 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 216, 26

Conread position: 98-347
Cow position: chr15:12304799-12304552 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 206

Conread position: 98-347
Cow position: chr15:14888483-14888724 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 31, 166

Conread position: 98-347
Cow position: chr15:16112557-16112307 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 19

Conread position: 98-347
Cow position: chr15:16261471-16261243 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 98-347
Cow position: chr15:16667341-16667585 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 123

Conread position: 98-347
Cow position: chr15:17233349-17233099 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 176, 28

Conread position: 98-347
Cow position: chr15:17763065-17762821 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 98

Conread position: 98-347
Cow position: chr15:21803503-21803752 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 154, 49

Conread position: 98-347
Cow position: chr15:22532395-22532166 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 98-347
Cow position: chr15:22938605-22938854 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 163
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 202, 44

Conread position: 98-347
Cow position: chr15:23275693-23275446 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 185, 15

Conread position: 98-347
Cow position: chr15:25208605-25208846 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 216, 29

Conread position: 98-347
Cow position: chr15:26903354-26903106 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 165

Conread position: 98-347
Cow position: chr15:30470812-30471066 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 98-347
Cow position: chr15:33643250-33643004 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 175

Conread position: 98-347
Cow position: chr15:34284254-34284497 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 141, 6

Conread position: 98-347
Cow position: chr15:36887983-36887752 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 13, 0

Conread position: 98-347
Cow position: chr15:49274109-49273875 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 99-259
Cow position: chr15:41360795-41360952 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 18

Conread position: 99-271
Cow position: chr15:52809426-52809596 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 84, 37

Conread position: 99-272
Cow position: chr15:4093776-4093948 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 31

Conread position: 99-272
Cow position: chr15:10660395-10660570 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 99-276
Cow position: chr15:29340222-29340042 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 29, 51

Conread position: 99-281
Cow position: chr15:6530691-6530872 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 99-294
Cow position: chr15:6272731-6272924 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 17

Conread position: 99-294
Cow position: chr15:10563344-10563542 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 29, 14

Conread position: 99-298
Cow position: chr15:25650264-25650451 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 99-304
Cow position: chr15:16603979-16603778 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 28, 73

Conread position: 99-315
Cow position: chr15:33306266-33306053 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 44, 20

Conread position: 99-337
Cow position: chr15:36793330-36793574 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 189

Conread position: 99-345
Cow position: chr15:10088474-10088234 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 177, 31

Conread position: 99-346
Cow position: chr15:47042471-47042729 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 0

Conread position: 99-347
Cow position: chr15:13395707-13395461 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 28, 17

Conread position: 99-347
Cow position: chr15:36952043-36952286 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 25, 111

Conread position: 99-347
Cow position: chr15:40957735-40957491 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 41

Conread position: 100-279
Cow position: chr15:39082367-39082191 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 16

Conread position: 100-301
Cow position: chr15:31928741-31928942 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 180, 36

Conread position: 101-346
Cow position: chr15:41624733-41624983 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 50

Conread position: 101-347
Cow position: chr15:662314-662551 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 102-260
Cow position: chr15:23567972-23568130 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 30, 38

Conread position: 102-272
Cow position: chr15:6905226-6905062 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 140
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 102-275
Cow position: chr15:35425660-35425827 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 102-276
Cow position: chr15:40415485-40415658 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 150, 38

Conread position: 102-281
Cow position: chr15:22442119-22442301 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 102-281
Cow position: chr15:44237572-44237393 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 102-288
Cow position: chr15:78727-78543 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 107

Conread position: 102-288
Cow position: chr15:25907071-25906876 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 34, 0

Conread position: 102-295
Cow position: chr15:3700132-3700325 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 157
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 82

Conread position: 102-298
Cow position: chr15:10737593-10737781 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 15

Conread position: 102-298
Cow position: chr15:26573531-26573341 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 102-298
Cow position: chr15:41527823-41528013 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 25

Conread position: 102-305
Cow position: chr15:46868558-46868762 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 137

Conread position: 102-306
Cow position: chr15:24044943-24045155 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 198

Conread position: 102-307
Cow position: chr15:31560243-31560436 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 102-310
Cow position: chr15:5234848-5235049 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 102-310
Cow position: chr15:5717866-5717662 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 146

Conread position: 102-310
Cow position: chr15:28823661-28823871 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 28

Conread position: 102-310
Cow position: chr15:39598396-39598188 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 80, 19

Conread position: 102-316
Cow position: chr15:13554507-13554292 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 180, 36

Conread position: 102-334
Cow position: chr15:13432649-13432408 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 236

Conread position: 102-345
Cow position: chr15:20391121-20391362 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 65, 57

Conread position: 102-345
Cow position: chr15:21821772-21822012 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 218, 30

Conread position: 102-345
Cow position: chr15:36259449-36259682 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 174, 0

Conread position: 102-345
Cow position: chr15:36846021-36846272 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 101

Conread position: 102-347
Cow position: chr15:1329949-1330196 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 200, 38

Conread position: 102-347
Cow position: chr15:1857880-1857639 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 28

Conread position: 102-347
Cow position: chr15:2952972-2953220 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 25, 188

Conread position: 102-347
Cow position: chr15:6970142-6969900 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 87

Conread position: 102-347
Cow position: chr15:10608152-10608396 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 188, 51

Conread position: 102-347
Cow position: chr15:11995873-11996115 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 212, 35

Conread position: 102-347
Cow position: chr15:14988145-14987908 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 113

Conread position: 102-347
Cow position: chr15:17084369-17084119 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 209

Conread position: 102-347
Cow position: chr15:21893935-21893693 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 103

Conread position: 102-347
Cow position: chr15:24967943-24967714 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 17

Conread position: 102-347
Cow position: chr15:36435358-36435115 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 27

Conread position: 103-282
Cow position: chr15:8253898-8254068 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 112, 20

Conread position: 103-298
Cow position: chr15:18671300-18671495 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 24, 146

Conread position: 103-298
Cow position: chr15:52611462-52611260 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 103-347
Cow position: chr15:8665439-8665694 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 159

Conread position: 103-347
Cow position: chr15:20534291-20534540 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 173
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 185

Conread position: 104-295
Cow position: chr15:34140137-34139943 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 39, 33

Conread position: 104-298
Cow position: chr15:17353498-17353688 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 170, 36

Conread position: 104-345
Cow position: chr15:20459153-20459396 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 33

Conread position: 104-347
Cow position: chr15:38827173-38827402 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 18, 34

Conread position: 105-347
Cow position: chr15:286632-286385 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 105-347
Cow position: chr15:19553772-19554013 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 25

Conread position: 105-347
Cow position: chr15:23572534-23572776 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 61

Conread position: 106-269
Cow position: chr15:5730091-5729928 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 80, 38

Conread position: 106-271
Cow position: chr15:26404432-26404269 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 0

Conread position: 106-290
Cow position: chr15:41087749-41087936 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 30, 105

Conread position: 106-310
Cow position: chr15:5420731-5420939 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 29, 0

Conread position: 106-347
Cow position: chr15:3695784-3695550 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 104

Conread position: 106-347
Cow position: chr15:36353820-36353582 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 197

Conread position: 108-319
Cow position: chr15:49258011-49257802 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 200, 18

Conread position: 108-328
Cow position: chr15:50660778-50660549 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 109-319
Cow position: chr15:16476589-16476793 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 127

Conread position: 111-317
Cow position: chr15:31025136-31024934 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 112-343
Cow position: chr15:49483770-49483543 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 202, 41

Conread position: 112-345
Cow position: chr15:24994370-24994597 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 164, 18

Conread position: 114-297
Cow position: chr15:40594360-40594545 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 147
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 0

Conread position: 114-319
Cow position: chr15:44280244-44280041 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 115-281
Cow position: chr15:30795124-30794956 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 139
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 97

Conread position: 115-334
Cow position: chr15:53716578-53716360 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 31, 158

Conread position: 115-347
Cow position: chr15:34896902-34896674 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 7

Conread position: 116-281
Cow position: chr15:9781605-9781447 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 117-278
Cow position: chr15:47773351-47773513 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 35

Conread position: 117-298
Cow position: chr15:36388431-36388250 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 118-347
Cow position: chr15:25350107-25349887 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 85, 22

Conread position: 119-310
Cow position: chr15:40835251-40835058 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 159, 181

Conread position: 119-347
Cow position: chr15:225666-225890 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 152, 0

Conread position: 122-310
Cow position: chr15:41583014-41582832 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 123-288
Cow position: chr15:30982073-30981910 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 125-343
Cow position: chr15:47843961-47844173 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 164, 0

Conread position: 125-347
Cow position: chr15:244912-244695 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 15

Conread position: 125-347
Cow position: chr15:26851093-26851311 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 163

Conread position: 126-310
Cow position: chr15:6037327-6037503 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 26

Conread position: 126-347
Cow position: chr15:31637431-31637208 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 155, 14

Conread position: 127-336
Cow position: chr15:15154428-15154220 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 172, 19

Conread position: 129-298
Cow position: chr15:2141175-2141344 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 129-336
Cow position: chr15:21903281-21903486 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 161

Conread position: 129-344
Cow position: chr15:27063394-27063602 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 14

Conread position: 129-347
Cow position: chr15:9465805-9465587 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 159, 189

Conread position: 131-331
Cow position: chr15:47592547-47592738 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 173, 65

Conread position: 131-347
Cow position: chr15:49784157-49784368 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 12, 154

Conread position: 131-347
Cow position: chr15:52432471-52432251 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 13

Conread position: 132-281
Cow position: chr15:30986170-30986320 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 144, 0

Conread position: 132-298
Cow position: chr15:11912434-11912596 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 132-347
Cow position: chr15:17196273-17196058 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 150, 183

Conread position: 133-304
Cow position: chr15:14505556-14505386 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 80

Conread position: 133-345
Cow position: chr15:50333105-50332890 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 79

Conread position: 134-323
Cow position: chr15:27016127-27016312 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 135-347
Cow position: chr15:24982058-24982266 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 46, 9

Conread position: 137-288
Cow position: chr15:30316448-30316600 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 140, 12

Conread position: 137-306
Cow position: chr15:31495104-31495271 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 137-331
Cow position: chr15:33976569-33976768 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 168

Conread position: 138-288
Cow position: chr15:16543328-16543483 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 96, 139

Conread position: 138-326
Cow position: chr15:23719365-23719551 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 138-347
Cow position: chr15:4418280-4418489 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 51

Conread position: 138-347
Cow position: chr15:26079236-26079433 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 44, 11

Conread position: 139-323
Cow position: chr15:14261141-14261322 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 140-321
Cow position: chr15:20950370-20950204 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 140-346
Cow position: chr15:49132175-49131973 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 174, 138

Conread position: 140-347
Cow position: chr15:24031317-24031110 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 115

Conread position: 141-313
Cow position: chr15:20081887-20081716 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 81, 61

Conread position: 142-347
Cow position: chr15:2931451-2931658 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 53, 79

Conread position: 143-343
Cow position: chr15:26896579-26896782 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 18, 0

Conread position: 144-340
Cow position: chr15:9879264-9879463 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 144-347
Cow position: chr15:10049198-10049401 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 61

Conread position: 145-320
Cow position: chr15:29604588-29604762 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 157, 0

Conread position: 145-347
Cow position: chr15:26442327-26442127 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 131, 157

Conread position: 146-297
Cow position: chr15:48590134-48590284 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 137, 36

Conread position: 146-347
Cow position: chr15:11908840-11909034 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 148-298
Cow position: chr15:2389806-2389657 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 0

Conread position: 148-347
Cow position: chr15:921854-921665 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 0

Conread position: 149-288
Cow position: chr15:13669755-13669892 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 149-340
Cow position: chr15:44671227-44671423 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 106

Conread position: 149-345
Cow position: chr15:19002168-19002368 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 38, 155

Conread position: 150-298
Cow position: chr15:18587568-18587711 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 154-293
Cow position: chr15:22787939-22787799 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 154-347
Cow position: chr15:4485257-4485061 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 134, 0

Conread position: 155-295
Cow position: chr15:18776649-18776789 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 155-313
Cow position: chr15:39520270-39520113 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 147, 0

Conread position: 157-272
Cow position: chr15:25758082-25757966 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 157-347
Cow position: chr15:41475731-41475914 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 94, 15

Conread position: 158-324
Cow position: chr15:18834175-18834348 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 74

Conread position: 159-310
Cow position: chr15:26529988-26529838 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 138, 0

Conread position: 161-347
Cow position: chr15:8642213-8642021 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 39

Conread position: 164-295
Cow position: chr15:34223959-34223828 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 112
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 168-332
Cow position: chr15:15992554-15992717 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 146, 56

Conread position: 169-310
Cow position: chr15:46283830-46283973 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 12

Conread position: 169-343
Cow position: chr15:41534738-41534572 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 0

Conread position: 171-347
Cow position: chr15:36422698-36422531 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 128, 101

Conread position: 171-347
Cow position: chr15:48326145-48326314 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 174-285
Cow position: chr15:16525648-16525541 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 174-313
Cow position: chr15:19759144-19759004 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 130

Conread position: 174-323
Cow position: chr15:24953440-24953588 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 125, 0

Conread position: 174-347
Cow position: chr15:28099195-28099025 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 130

Conread position: 176-347
Cow position: chr15:14964086-14964247 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 181-292
Cow position: chr15:43728912-43728800 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 97

Conread position: 182-297
Cow position: chr15:39911936-39911821 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 187-311
Cow position: chr15:43715393-43715272 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 20

Conread position: 187-347
Cow position: chr15:46059432-46059269 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 115, 99

Conread position: 189-284
Cow position: chr15:40581178-40581085 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 82
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 194-335
Cow position: chr15:8331139-8331275 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 196-347
Cow position: chr15:27975810-27975961 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 121, 93

Conread position: 198-347
Cow position: chr15:26849478-26849619 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 199-295
Cow position: chr15:1984354-1984256 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 88
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 199-295
Cow position: chr15:18738446-18738542 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 199-298
Cow position: chr15:10723066-10723165 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 199-323
Cow position: chr15:15232631-15232756 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 200-342
Cow position: chr15:5710459-5710317 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 71

Conread position: 200-345
Cow position: chr15:33897881-33897741 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 114, 74

Conread position: 200-347
Cow position: chr15:840091-840234 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 200-347
Cow position: chr15:18703878-18704020 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 102

Conread position: 201-298
Cow position: chr15:28788272-28788173 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 202-345
Cow position: chr15:13613637-13613497 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 204-327
Cow position: chr15:16911609-16911735 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 204-340
Cow position: chr15:20566968-20566837 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 204-347
Cow position: chr15:40844567-40844708 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 218-347
Cow position: chr15:53005900-53006023 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.