Non-Coding RNA Search

Cow genome map


           Conread name:
           rcmu31_n5.y1
        

               Conread position:
               1-96
               

               Cow position:
               chr5:39094345-39094441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-100
               

               Cow position:
               chr5:5111285-5111180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               1-343
               

               Cow position:
               chr5:34915196-34914855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               57, 99
               

               Conread position:
               2-91
               

               Cow position:
               chr5:43929941-43929852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               80
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               56, 72
               

               Conread position:
               2-345
               

               Cow position:
               chr5:52165311-52164972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               4-321
               

               Cow position:
               chr5:43929870-43929554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 10
               

               Conread position:
               44-320
               

               Cow position:
               chr5:56317197-56317464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               47, 98
               

               Conread position:
               46-323
               

               Cow position:
               chr5:34300825-34301098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               81, 6
               

               Conread position:
               50-297
               

               Cow position:
               chr5:27306209-27306461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               50, 112
               

               Conread position:
               54-293
               

               Cow position:
               chr5:55176806-55177036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               75, 19
               

               Conread position:
               54-294
               

               Cow position:
               chr5:26990308-26990540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 19
               

               Conread position:
               54-295
               

               Cow position:
               chr5:64758855-64758616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               86, 19
               

               Conread position:
               54-305
               

               Cow position:
               chr5:55068622-55068869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               54-323
               

               Cow position:
               chr5:13717651-13717391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               54-347
               

               Cow position:
               chr5:17555115-17554832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               82, 20
               

               Conread position:
               54-347
               

               Cow position:
               chr5:30629247-30628950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               54-347
               

               Cow position:
               chr5:33560817-33560535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               55-347
               

               Cow position:
               chr5:7057483-7057194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               233, 45
               

               Conread position:
               56-331
               

               Cow position:
               chr5:37646630-37646353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               58-296
               

               Cow position:
               chr5:15722146-15721922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               63-345
               

               Cow position:
               chr5:20779475-20779198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               9, 123
               

               Conread position:
               67-304
               

               Cow position:
               chr5:4280374-4280611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               10, 33
               

               Conread position:
               68-286
               

               Cow position:
               chr5:56153540-56153759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 129
               

               Conread position:
               69-263
               

               Cow position:
               chr5:58793680-58793486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               69-300
               

               Cow position:
               chr5:50871731-50871975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               74-275
               

               Cow position:
               chr5:63992239-63992039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               75-345
               

               Cow position:
               chr5:59627039-59626771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               76-227
               

               Cow position:
               chr5:31144852-31144702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               70, 23
               

               Conread position:
               76-272
               

               Cow position:
               chr5:28927653-28927464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               51, 24
               

               Conread position:
               76-310
               

               Cow position:
               chr5:35826539-35826770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               76-323
               

               Cow position:
               chr5:54767973-54767727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               76-331
               

               Cow position:
               chr5:31640356-31640615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               76-346
               

               Cow position:
               chr5:33833980-33834242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               209, 27
               

               Conread position:
               76-347
               

               Cow position:
               chr5:63234890-63234620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               79-280
               

               Cow position:
               chr5:33537806-33538012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               164
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               7, 16
               

               Conread position:
               79-292
               

               Cow position:
               chr5:44446929-44446715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               79-292
               

               Cow position:
               chr5:54375568-54375352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               79-295
               

               Cow position:
               chr5:62378730-62378933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               79-347
               

               Cow position:
               chr5:44994104-44993837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 6
               

               Conread position:
               89-288
               

               Cow position:
               chr5:15363827-15364028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               90-334
               

               Cow position:
               chr5:66466267-66466504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               90-336
               

               Cow position:
               chr5:39815541-39815303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               90-346
               

               Cow position:
               chr5:57101576-57101324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               37, 10
               

               Conread position:
               92-288
               

               Cow position:
               chr5:46322846-46322657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               94-337
               

               Cow position:
               chr5:52001669-52001428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 44
               

               Conread position:
               94-346
               

               Cow position:
               chr5:56028575-56028343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               95-276
               

               Cow position:
               chr5:57626748-57626922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               40, 89
               

               Conread position:
               97-254
               

               Cow position:
               chr5:45472236-45472399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               97-275
               

               Cow position:
               chr5:45804015-45804193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               97-287
               

               Cow position:
               chr5:57935153-57934963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               155
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-296
               

               Cow position:
               chr5:14314481-14314684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               97-297
               

               Cow position:
               chr5:71494775-71494976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               97-343
               

               Cow position:
               chr5:65136229-65136458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               179, 33
               

               Conread position:
               97-345
               

               Cow position:
               chr5:20288308-20288057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 206
               

               Conread position:
               97-346
               

               Cow position:
               chr5:12673512-12673278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               97-347
               

               Cow position:
               chr5:25035287-25035051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               207, 32
               

               Conread position:
               97-347
               

               Cow position:
               chr5:30253697-30253943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               97-347
               

               Cow position:
               chr5:69099674-69099922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               46, 190
               

               Conread position:
               98-222
               

               Cow position:
               chr5:50799491-50799614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               41, 64
               

               Conread position:
               98-225
               

               Cow position:
               chr5:34638841-34638967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               98-260
               

               Cow position:
               chr5:52645122-52644962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               98-261
               

               Cow position:
               chr5:32696866-32696704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               98-272
               

               Cow position:
               chr5:19813266-19813090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               98-272
               

               Cow position:
               chr5:27172024-27171863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               98-275
               

               Cow position:
               chr5:1461044-1461222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               98-275
               

               Cow position:
               chr5:7755605-7755438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               98-276
               

               Cow position:
               chr5:63865752-63865938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 111
               

               Conread position:
               98-276
               

               Cow position:
               chr5:72951798-72951978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               98-279
               

               Cow position:
               chr5:37814579-37814763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               98-280
               

               Cow position:
               chr5:20422231-20422055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               98-281
               

               Cow position:
               chr5:14629856-14629666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               98-281
               

               Cow position:
               chr5:16214641-16214826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               98-281
               

               Cow position:
               chr5:56524126-56524313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               98-287
               

               Cow position:
               chr5:6045248-6045441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               98-287
               

               Cow position:
               chr5:22242819-22242620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               29, 120
               

               Conread position:
               98-287
               

               Cow position:
               chr5:47323422-47323607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               98-287
               

               Cow position:
               chr5:50533430-50533243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               45, 102
               

               Conread position:
               98-288
               

               Cow position:
               chr5:22643268-22643086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 38
               

               Conread position:
               98-288
               

               Cow position:
               chr5:56517059-56517249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 112
               

               Conread position:
               98-288
               

               Cow position:
               chr5:69731460-69731646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               31, 75
               

               Conread position:
               98-289
               

               Cow position:
               chr5:72564719-72564911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               98-290
               

               Cow position:
               chr5:57101825-57101633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               31, 106
               

               Conread position:
               98-291
               

               Cow position:
               chr5:54086500-54086687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               98-292
               

               Cow position:
               chr5:54350406-54350211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               98-293
               

               Cow position:
               chr5:63150211-63150019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               98-294
               

               Cow position:
               chr5:40109448-40109644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               98-294
               

               Cow position:
               chr5:45574572-45574772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               98-294
               

               Cow position:
               chr5:57575726-57575925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               98-295
               

               Cow position:
               chr5:23678745-23678550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               36, 106
               

               Conread position:
               98-295
               

               Cow position:
               chr5:50575742-50575936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               98-295
               

               Cow position:
               chr5:67212313-67212513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               29, 170
               

               Conread position:
               98-297
               

               Cow position:
               chr5:4710190-4709997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               98-297
               

               Cow position:
               chr5:64592139-64591940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               156
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               98-297
               

               Cow position:
               chr5:66551942-66551741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               156
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               98-298
               

               Cow position:
               chr5:5111118-5110913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               98-298
               

               Cow position:
               chr5:9090063-9089872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               98-298
               

               Cow position:
               chr5:16206198-16205999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               30, 88
               

               Conread position:
               98-298
               

               Cow position:
               chr5:23168872-23168670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               98-298
               

               Cow position:
               chr5:57156357-57156156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               98-300
               

               Cow position:
               chr5:458448-458646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               98-302
               

               Cow position:
               chr5:42050504-42050712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 75
               

               Conread position:
               98-306
               

               Cow position:
               chr5:7697962-7698164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               140, 39
               

               Conread position:
               98-309
               

               Cow position:
               chr5:48009892-48009691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               98-310
               

               Cow position:
               chr5:30276654-30276859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               201, 28
               

               Conread position:
               98-310
               

               Cow position:
               chr5:30805125-30805331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               98-310
               

               Cow position:
               chr5:55796008-55795797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               112, 39
               

               Conread position:
               98-315
               

               Cow position:
               chr5:61810743-61810945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               206, 28
               

               Conread position:
               98-316
               

               Cow position:
               chr5:37808712-37808489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               98-316
               

               Cow position:
               chr5:44796774-44796554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               176, 18
               

               Conread position:
               98-318
               

               Cow position:
               chr5:50821739-50821959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               98-318
               

               Cow position:
               chr5:56339063-56338846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               98-320
               

               Cow position:
               chr5:24136670-24136893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               38, 140
               

               Conread position:
               98-320
               

               Cow position:
               chr5:40241999-40242221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               43, 136
               

               Conread position:
               98-320
               

               Cow position:
               chr5:46509910-46509688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               46, 23
               

               Conread position:
               98-322
               

               Cow position:
               chr5:49440917-49440691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               37, 45
               

               Conread position:
               98-322
               

               Cow position:
               chr5:62142631-62142856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 192
               

               Conread position:
               98-325
               

               Cow position:
               chr5:49685313-49685094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               98-325
               

               Cow position:
               chr5:54060234-54060458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               46, 19
               

               Conread position:
               98-328
               

               Cow position:
               chr5:29903561-29903334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               179, 32
               

               Conread position:
               98-330
               

               Cow position:
               chr5:63627568-63627349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               98-331
               

               Cow position:
               chr5:57737061-57737287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               86, 39
               

               Conread position:
               98-331
               

               Cow position:
               chr5:59115344-59115568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               98-334
               

               Cow position:
               chr5:44028348-44028115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               38, 106
               

               Conread position:
               98-336
               

               Cow position:
               chr5:21828823-21829059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 135
               

               Conread position:
               98-336
               

               Cow position:
               chr5:35684893-35685130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               37, 110
               

               Conread position:
               98-336
               

               Cow position:
               chr5:69461287-69461527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               98-340
               

               Cow position:
               chr5:51935149-51935389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               182, 37
               

               Conread position:
               98-341
               

               Cow position:
               chr5:66366464-66366706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               40, 116
               

               Conread position:
               98-343
               

               Cow position:
               chr5:61455802-61456042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               98-344
               

               Cow position:
               chr5:45397529-45397765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 88
               

               Conread position:
               98-346
               

               Cow position:
               chr5:34561969-34562211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               18, 188
               

               Conread position:
               98-347
               

               Cow position:
               chr5:6439076-6438822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               44, 16
               

               Conread position:
               98-347
               

               Cow position:
               chr5:7044750-7044503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               37, 179
               

               Conread position:
               98-347
               

               Cow position:
               chr5:12434490-12434738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               98-347
               

               Cow position:
               chr5:16893816-16893575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               35, 51
               

               Conread position:
               98-347
               

               Cow position:
               chr5:18289087-18289321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               98-347
               

               Cow position:
               chr5:19278743-19278500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               90, 26
               

               Conread position:
               98-347
               

               Cow position:
               chr5:21617414-21617658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               98-347
               

               Cow position:
               chr5:24996266-24996018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               48, 42
               

               Conread position:
               98-347
               

               Cow position:
               chr5:26262719-26262482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               98-347
               

               Cow position:
               chr5:29828006-29828251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               85, 39
               

               Conread position:
               98-347
               

               Cow position:
               chr5:35247155-35246905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               98-347
               

               Cow position:
               chr5:36039049-36038802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               98-347
               

               Cow position:
               chr5:42670906-42670670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               98-347
               

               Cow position:
               chr5:43402857-43403112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               28, 168
               

               Conread position:
               98-347
               

               Cow position:
               chr5:46512806-46512565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               192, 34
               

               Conread position:
               98-347
               

               Cow position:
               chr5:50943190-50942959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               164, 31
               

               Conread position:
               98-347
               

               Cow position:
               chr5:51053693-51053445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               98-347
               

               Cow position:
               chr5:53835670-53835924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               55, 130
               

               Conread position:
               98-347
               

               Cow position:
               chr5:55955864-55956113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               137, 182
               

               Conread position:
               98-347
               

               Cow position:
               chr5:55966922-55966670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               195, 32
               

               Conread position:
               98-347
               

               Cow position:
               chr5:56070813-56071061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 190
               

               Conread position:
               98-347
               

               Cow position:
               chr5:60016124-60016367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 104
               

               Conread position:
               98-347
               

               Cow position:
               chr5:63192785-63192551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               98-347
               

               Cow position:
               chr5:65752814-65753063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 169
               

               Conread position:
               98-347
               

               Cow position:
               chr5:66972385-66972633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 41
               

               Conread position:
               98-347
               

               Cow position:
               chr5:67932507-67932263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               77, 11
               

               Conread position:
               98-347
               

               Cow position:
               chr5:72006536-72006294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               40, 187
               

               Conread position:
               98-347
               

               Cow position:
               chr5:74580746-74580990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               98-347
               

               Cow position:
               chr5:74643714-74643481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               99-245
               

               Cow position:
               chr5:43408401-43408255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 67
               

               Conread position:
               99-269
               

               Cow position:
               chr5:26150463-26150294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               99-272
               

               Cow position:
               chr5:15598281-15598108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               9, 133
               

               Conread position:
               99-272
               

               Cow position:
               chr5:34624915-34625090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               99-272
               

               Cow position:
               chr5:40237171-40237341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 62
               

               Conread position:
               99-272
               

               Cow position:
               chr5:41403607-41403444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               99-284
               

               Cow position:
               chr5:60747320-60747139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               99-287
               

               Cow position:
               chr5:20783576-20783766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               99-294
               

               Cow position:
               chr5:41713255-41713450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               99-301
               

               Cow position:
               chr5:17768186-17767991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               106, 38
               

               Conread position:
               99-310
               

               Cow position:
               chr5:44848062-44847854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               89, 38
               

               Conread position:
               99-310
               

               Cow position:
               chr5:50101420-50101205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               99-315
               

               Cow position:
               chr5:45420176-45419963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               205, 38
               

               Conread position:
               99-336
               

               Cow position:
               chr5:38833079-38833309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 47
               

               Conread position:
               99-345
               

               Cow position:
               chr5:47601777-47602009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               99-346
               

               Cow position:
               chr5:17087064-17086815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 12
               

               Conread position:
               99-346
               

               Cow position:
               chr5:41165044-41165284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               31, 178
               

               Conread position:
               99-347
               

               Cow position:
               chr5:35969493-35969743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               183, 38
               

               Conread position:
               99-347
               

               Cow position:
               chr5:56548538-56548769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               99-347
               

               Cow position:
               chr5:65967776-65967530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               34, 205
               

               Conread position:
               99-347
               

               Cow position:
               chr5:69337781-69338017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               99-347
               

               Cow position:
               chr5:70270817-70271070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 198
               

               Conread position:
               100-296
               

               Cow position:
               chr5:9894167-9893968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               100-347
               

               Cow position:
               chr5:22667036-22667273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               101-298
               

               Cow position:
               chr5:52083296-52083499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               37, 94
               

               Conread position:
               101-323
               

               Cow position:
               chr5:58446766-58446988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               203, 173
               

               Conread position:
               102-272
               

               Cow position:
               chr5:66530878-66531048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 134
               

               Conread position:
               102-275
               

               Cow position:
               chr5:61102675-61102849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               102-278
               

               Cow position:
               chr5:35976478-35976646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               102-280
               

               Cow position:
               chr5:65588662-65588838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 79
               

               Conread position:
               102-288
               

               Cow position:
               chr5:74015901-74016086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               31, 84
               

               Conread position:
               102-291
               

               Cow position:
               chr5:3582526-3582710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               181, 35
               

               Conread position:
               102-293
               

               Cow position:
               chr5:56877446-56877633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               116, 35
               

               Conread position:
               102-294
               

               Cow position:
               chr5:41294042-41294233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 38
               

               Conread position:
               102-294
               

               Cow position:
               chr5:45273539-45273350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               102-295
               

               Cow position:
               chr5:17602240-17602052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               158
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               39, 28
               

               Conread position:
               102-295
               

               Cow position:
               chr5:25231049-25230866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               28, 76
               

               Conread position:
               102-295
               

               Cow position:
               chr5:41545933-41545740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               102-296
               

               Cow position:
               chr5:35982780-35982583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               102-296
               

               Cow position:
               chr5:67118379-67118574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               102-297
               

               Cow position:
               chr5:4220945-4221132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               102-298
               

               Cow position:
               chr5:26094207-26094010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               102-298
               

               Cow position:
               chr5:29912378-29912575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               107, 152
               

               Conread position:
               102-303
               

               Cow position:
               chr5:11229708-11229509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               139, 28
               

               Conread position:
               102-303
               

               Cow position:
               chr5:61725927-61726125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               197, 80
               

               Conread position:
               102-303
               

               Cow position:
               chr5:68718830-68719029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               158
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               188, 107
               

               Conread position:
               102-310
               

               Cow position:
               chr5:60183762-60183973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               167
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               30, 199
               

               Conread position:
               102-317
               

               Cow position:
               chr5:56211862-56212080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               28, 205
               

               Conread position:
               102-318
               

               Cow position:
               chr5:54311296-54311513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               102-321
               

               Cow position:
               chr5:44752356-44752129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 209
               

               Conread position:
               102-323
               

               Cow position:
               chr5:63427046-63426820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               102-332
               

               Cow position:
               chr5:57768020-57767797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               182, 26
               

               Conread position:
               102-336
               

               Cow position:
               chr5:70951915-70951702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               180, 35
               

               Conread position:
               102-341
               

               Cow position:
               chr5:25495388-25495153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               202, 42
               

               Conread position:
               102-343
               

               Cow position:
               chr5:68537706-68537465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 9
               

               Conread position:
               102-343
               

               Cow position:
               chr5:72895646-72895885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               214, 0
               

               Conread position:
               102-346
               

               Cow position:
               chr5:26097256-26097492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               182, 35
               

               Conread position:
               102-347
               

               Cow position:
               chr5:6503922-6503673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               102-347
               

               Cow position:
               chr5:12557331-12557084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               102-347
               

               Cow position:
               chr5:20128015-20128257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               215, 24
               

               Conread position:
               102-347
               

               Cow position:
               chr5:30845072-30845309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 106
               

               Conread position:
               102-347
               

               Cow position:
               chr5:31052346-31052591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               147, 34
               

               Conread position:
               102-347
               

               Cow position:
               chr5:32339005-32338757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               102-347
               

               Cow position:
               chr5:35208225-35208466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               212, 38
               

               Conread position:
               102-347
               

               Cow position:
               chr5:41935692-41935452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               27, 81
               

               Conread position:
               102-347
               

               Cow position:
               chr5:45845733-45845487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               44, 162
               

               Conread position:
               102-347
               

               Cow position:
               chr5:49342088-49341832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               102-347
               

               Cow position:
               chr5:56014690-56014925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 182
               

               Conread position:
               102-347
               

               Cow position:
               chr5:64321715-64321964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               173, 35
               

               Conread position:
               102-347
               

               Cow position:
               chr5:64523906-64523661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               102-347
               

               Cow position:
               chr5:65776421-65776174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               160, 48
               

               Conread position:
               102-347
               

               Cow position:
               chr5:65941291-65941047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 164
               

               Conread position:
               102-347
               

               Cow position:
               chr5:66257599-66257837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 42
               

               Conread position:
               103-297
               

               Cow position:
               chr5:63987487-63987292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 113
               

               Conread position:
               103-298
               

               Cow position:
               chr5:42845635-42845435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               24, 155
               

               Conread position:
               103-323
               

               Cow position:
               chr5:58856066-58856286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               190, 34
               

               Conread position:
               103-336
               

               Cow position:
               chr5:57074372-57074140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 202
               

               Conread position:
               103-344
               

               Cow position:
               chr5:26467585-26467828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               30, 212
               

               Conread position:
               103-347
               

               Cow position:
               chr5:42064165-42064410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               103-347
               

               Cow position:
               chr5:49501863-49501615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               104-294
               

               Cow position:
               chr5:49474585-49474394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 169
               

               Conread position:
               104-320
               

               Cow position:
               chr5:41981333-41981543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               104-323
               

               Cow position:
               chr5:43992285-43992508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 36
               

               Conread position:
               104-343
               

               Cow position:
               chr5:5855824-5856059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               210, 32
               

               Conread position:
               104-344
               

               Cow position:
               chr5:64140496-64140738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 211
               

               Conread position:
               104-347
               

               Cow position:
               chr5:11668221-11667981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               24, 34
               

               Conread position:
               105-310
               

               Cow position:
               chr5:57686777-57686568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               105-343
               

               Cow position:
               chr5:32394564-32394801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               100, 26
               

               Conread position:
               105-347
               

               Cow position:
               chr5:19752268-19752504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               105-347
               

               Cow position:
               chr5:53946860-53947102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               209, 195
               

               Conread position:
               106-292
               

               Cow position:
               chr5:71724265-71724449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               32, 103
               

               Conread position:
               106-310
               

               Cow position:
               chr5:62172379-62172577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               106-320
               

               Cow position:
               chr5:30949952-30949737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               106-323
               

               Cow position:
               chr5:4166609-4166820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               198, 33
               

               Conread position:
               106-347
               

               Cow position:
               chr5:22795178-22795409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               32, 103
               

               Conread position:
               106-347
               

               Cow position:
               chr5:51065496-51065718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               107-260
               

               Cow position:
               chr5:20407714-20407560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               107-287
               

               Cow position:
               chr5:28302784-28302598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               107-319
               

               Cow position:
               chr5:26477053-26476842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 9
               

               Conread position:
               107-330
               

               Cow position:
               chr5:7193383-7193599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               30, 151
               

               Conread position:
               107-338
               

               Cow position:
               chr5:55019258-55019488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               175, 32
               

               Conread position:
               107-347
               

               Cow position:
               chr5:30232871-30233113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               23, 142
               

               Conread position:
               107-347
               

               Cow position:
               chr5:30302859-30303084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               47, 74
               

               Conread position:
               107-347
               

               Cow position:
               chr5:52211705-52211488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               32, 65
               

               Conread position:
               107-347
               

               Cow position:
               chr5:73253381-73253608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               108-298
               

               Cow position:
               chr5:66339046-66339231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               108-347
               

               Cow position:
               chr5:8736323-8736074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               18, 37
               

               Conread position:
               108-347
               

               Cow position:
               chr5:26549175-26548940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 176
               

               Conread position:
               110-288
               

               Cow position:
               chr5:12322838-12322659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 94
               

               Conread position:
               110-292
               

               Cow position:
               chr5:67243888-67244068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               112-276
               

               Cow position:
               chr5:60188960-60189127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               112-294
               

               Cow position:
               chr5:39258483-39258656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               112-346
               

               Cow position:
               chr5:52108296-52108056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               162, 25
               

               Conread position:
               114-347
               

               Cow position:
               chr5:50600026-50600249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               109, 22
               

               Conread position:
               115-347
               

               Cow position:
               chr5:14920958-14920723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               116-295
               

               Cow position:
               chr5:57230365-57230184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               116-319
               

               Cow position:
               chr5:61875517-61875714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               119-271
               

               Cow position:
               chr5:6286453-6286304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               119-294
               

               Cow position:
               chr5:56334529-56334360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               119-336
               

               Cow position:
               chr5:45187142-45186924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 125
               

               Conread position:
               119-347
               

               Cow position:
               chr5:39447559-39447322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               120-290
               

               Cow position:
               chr5:29771510-29771676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               123-345
               

               Cow position:
               chr5:51298731-51298514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               29, 8
               

               Conread position:
               124-272
               

               Cow position:
               chr5:45574381-45574235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               124-320
               

               Cow position:
               chr5:58555118-58555315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 14
               

               Conread position:
               126-272
               

               Cow position:
               chr5:15426523-15426668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               126-346
               

               Cow position:
               chr5:36868722-36868939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               176, 17
               

               Conread position:
               127-345
               

               Cow position:
               chr5:64176140-64175929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               128-287
               

               Cow position:
               chr5:74974343-74974184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               128-347
               

               Cow position:
               chr5:5760327-5760106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               150, 110
               

               Conread position:
               129-347
               

               Cow position:
               chr5:16939607-16939389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               188, 154
               

               Conread position:
               130-319
               

               Cow position:
               chr5:56222555-56222371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               122, 13
               

               Conread position:
               130-347
               

               Cow position:
               chr5:17104841-17105048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               130-347
               

               Cow position:
               chr5:39937105-39937320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               174, 10
               

               Conread position:
               130-347
               

               Cow position:
               chr5:60523721-60523930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               38, 79
               

               Conread position:
               130-347
               

               Cow position:
               chr5:74040016-74039803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               8, 128
               

               Conread position:
               131-272
               

               Cow position:
               chr5:65679981-65679843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               131-323
               

               Cow position:
               chr5:27293896-27293703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               13, 167
               

               Conread position:
               131-346
               

               Cow position:
               chr5:39035769-39035984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               173, 121
               

               Conread position:
               132-294
               

               Cow position:
               chr5:64139550-64139715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               132-347
               

               Cow position:
               chr5:46541065-46540857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               64, 77
               

               Conread position:
               133-310
               

               Cow position:
               chr5:55232820-55232646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               125, 72
               

               Conread position:
               134-347
               

               Cow position:
               chr5:69383247-69383454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               136-316
               

               Cow position:
               chr5:51490252-51490074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               11, 50
               

               Conread position:
               136-325
               

               Cow position:
               chr5:44874187-44874376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               164, 116
               

               Conread position:
               137-297
               

               Cow position:
               chr5:43457536-43457376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               87, 20
               

               Conread position:
               137-347
               

               Cow position:
               chr5:64027024-64026812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 167
               

               Conread position:
               138-281
               

               Cow position:
               chr5:45126647-45126791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               138-307
               

               Cow position:
               chr5:9369278-9369106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               138-319
               

               Cow position:
               chr5:44726338-44726159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               139-295
               

               Cow position:
               chr5:9170584-9170429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               134, 85
               

               Conread position:
               139-347
               

               Cow position:
               chr5:4267667-4267863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               140-295
               

               Cow position:
               chr5:69636222-69636377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               140-297
               

               Cow position:
               chr5:24069388-24069544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               140-319
               

               Cow position:
               chr5:60599207-60599027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               9, 118
               

               Conread position:
               140-320
               

               Cow position:
               chr5:57489947-57489772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               164, 52
               

               Conread position:
               140-323
               

               Cow position:
               chr5:55129341-55129525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               140-335
               

               Cow position:
               chr5:60515030-60514835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               162, 89
               

               Conread position:
               140-347
               

               Cow position:
               chr5:44054054-44053843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               137, 19
               

               Conread position:
               140-347
               

               Cow position:
               chr5:57062531-57062325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               119, 132
               

               Conread position:
               140-347
               

               Cow position:
               chr5:57419796-57419593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               141-298
               

               Cow position:
               chr5:9233990-9233834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               120, 136
               

               Conread position:
               141-347
               

               Cow position:
               chr5:33273693-33273900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 72
               

               Conread position:
               142-288
               

               Cow position:
               chr5:21223324-21223469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               142-314
               

               Cow position:
               chr5:44163369-44163191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               142-346
               

               Cow position:
               chr5:72045674-72045473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               172, 65
               

               Conread position:
               142-347
               

               Cow position:
               chr5:61049332-61049537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               125, 113
               

               Conread position:
               144-278
               

               Cow position:
               chr5:26253171-26253037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-295
               

               Cow position:
               chr5:59627102-59627253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               144-347
               

               Cow position:
               chr5:12299913-12300113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               146-294
               

               Cow position:
               chr5:50824596-50824743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               146-298
               

               Cow position:
               chr5:17605130-17604976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               147-345
               

               Cow position:
               chr5:12351802-12351612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               148-270
               

               Cow position:
               chr5:12169762-12169641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               153-294
               

               Cow position:
               chr5:35647354-35647495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               153-295
               

               Cow position:
               chr5:60948144-60948285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               153-336
               

               Cow position:
               chr5:38168905-38169085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               101, 124
               

               Conread position:
               154-347
               

               Cow position:
               chr5:40241758-40241937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               154-347
               

               Cow position:
               chr5:46704287-46704097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               154-347
               

               Cow position:
               chr5:55942367-55942174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               155-293
               

               Cow position:
               chr5:75228186-75228046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               155-336
               

               Cow position:
               chr5:51247118-51246940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               80, 148
               

               Conread position:
               155-347
               

               Cow position:
               chr5:2240976-2240786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               170, 36
               

               Conread position:
               156-347
               

               Cow position:
               chr5:44196915-44196727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               157-344
               

               Cow position:
               chr5:26147606-26147790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               119, 146
               

               Conread position:
               158-291
               

               Cow position:
               chr5:5847829-5847697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 37
               

               Conread position:
               158-345
               

               Cow position:
               chr5:26167437-26167621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               125, 146
               

               Conread position:
               160-347
               

               Cow position:
               chr5:54312619-54312804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               154, 129
               

               Conread position:
               162-330
               

               Cow position:
               chr5:55849905-55850069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               136, 45
               

               Conread position:
               164-346
               

               Cow position:
               chr5:35190132-35190308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               165-321
               

               Cow position:
               chr5:60596108-60595953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               56, 44
               

               Conread position:
               165-347
               

               Cow position:
               chr5:37842256-37842076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               111, 139
               

               Conread position:
               165-347
               

               Cow position:
               chr5:51289568-51289398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               167-301
               

               Cow position:
               chr5:51490577-51490443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               168-347
               

               Cow position:
               chr5:34288224-34288051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               106, 39
               

               Conread position:
               169-347
               

               Cow position:
               chr5:3817662-3817484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 142
               

               Conread position:
               169-347
               

               Cow position:
               chr5:49821455-49821634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               133, 105
               

               Conread position:
               170-287
               

               Cow position:
               chr5:29148919-29149033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               170-310
               

               Cow position:
               chr5:16668725-16668866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               170-346
               

               Cow position:
               chr5:44734697-44734525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               174-346
               

               Cow position:
               chr5:15991607-15991443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               175-272
               

               Cow position:
               chr5:35833442-35833539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               176-319
               

               Cow position:
               chr5:38647674-38647816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               128, 107
               

               Conread position:
               178-347
               

               Cow position:
               chr5:1694052-1693889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               178-347
               

               Cow position:
               chr5:57497388-57497223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               182-272
               

               Cow position:
               chr5:54099261-54099351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               77
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               183-280
               

               Cow position:
               chr5:1085804-1085900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               83
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               184-281
               

               Cow position:
               chr5:57785550-57785648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               187-281
               

               Cow position:
               chr5:1946876-1946970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               79
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               187-292
               

               Cow position:
               chr5:23207132-23207026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               187-295
               

               Cow position:
               chr5:35394388-35394280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               187-298
               

               Cow position:
               chr5:60126735-60126846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               187-313
               

               Cow position:
               chr5:46421631-46421758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               91, 117
               

               Conread position:
               187-323
               

               Cow position:
               chr5:1090774-1090640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               117, 12
               

               Conread position:
               187-336
               

               Cow position:
               chr5:70591597-70591739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 104
               

               Conread position:
               191-341
               

               Cow position:
               chr5:6086293-6086144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               85, 115
               

               Conread position:
               193-347
               

               Cow position:
               chr5:34918397-34918546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               193-347
               

               Cow position:
               chr5:37253480-37253626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               194-310
               

               Cow position:
               chr5:29979906-29979791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               194-346
               

               Cow position:
               chr5:60207760-60207907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               194-347
               

               Cow position:
               chr5:74887848-74887696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 118
               

               Conread position:
               195-337
               

               Cow position:
               chr5:52192376-52192240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               104, 117
               

               Conread position:
               195-347
               

               Cow position:
               chr5:29599493-29599349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               195-347
               

               Cow position:
               chr5:29895224-29895374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               195-347
               

               Cow position:
               chr5:49207274-49207126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               195-347
               

               Cow position:
               chr5:60100523-60100665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               195-347
               

               Cow position:
               chr5:60153828-60153970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               196-311
               

               Cow position:
               chr5:4981505-4981622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               86, 8
               

               Conread position:
               196-347
               

               Cow position:
               chr5:38420655-38420811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               197-347
               

               Cow position:
               chr5:5030498-5030642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               198-294
               

               Cow position:
               chr5:27611720-27611625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               198-308
               

               Cow position:
               chr5:20882568-20882458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               199-294
               

               Cow position:
               chr5:36822940-36823035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               199-300
               

               Cow position:
               chr5:47841073-47841175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               103
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               199-336
               

               Cow position:
               chr5:21721413-21721280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               199-345
               

               Cow position:
               chr5:19294469-19294318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 65
               

               Conread position:
               199-347
               

               Cow position:
               chr5:53175201-53175046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               200-298
               

               Cow position:
               chr5:48820787-48820885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               201-320
               

               Cow position:
               chr5:14354134-14354254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               201-347
               

               Cow position:
               chr5:19968300-19968157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               202-345
               

               Cow position:
               chr5:34787634-34787773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               202-347
               

               Cow position:
               chr5:66287005-66287145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               206-340
               

               Cow position:
               chr5:32975822-32975962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               207-347
               

               Cow position:
               chr5:6245598-6245462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               215-325
               

               Cow position:
               chr5:19468398-19468286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               215-347
               

               Cow position:
               chr5:19626651-19626779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-96
Cow position:	chr5:39094345-39094441 (view UCSC Genome Browser custom track)
Alignm length:	97
Alignm identity:	81
Alignm E-value:	7e-21
Alignm gaps (pig, cow):	69, 0
Conread position:	1-100
Cow position:	chr5:5111285-5111180 (view UCSC Genome Browser custom track)
Alignm length:	106
Alignm identity:	89
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	57, 0
Conread position:	1-343
Cow position:	chr5:34915196-34914855 (view UCSC Genome Browser custom track)
Alignm length:	350
Alignm identity:	242
Alignm E-value:	2.99878e-43
Alignm gaps (pig, cow):	57, 99
Conread position:	2-91
Cow position:	chr5:43929941-43929852 (view UCSC Genome Browser custom track)
Alignm length:	91
Alignm identity:	80
Alignm E-value:	8e-22
Alignm gaps (pig, cow):	56, 72
Conread position:	2-345
Cow position:	chr5:52165311-52164972 (view UCSC Genome Browser custom track)
Alignm length:	349
Alignm identity:	230
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	21, 37
Conread position:	4-321
Cow position:	chr5:43929870-43929554 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	231
Alignm E-value:	0
Alignm gaps (pig, cow):	132, 10
Conread position:	44-320
Cow position:	chr5:56317197-56317464 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	191
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	47, 98
Conread position:	46-323
Cow position:	chr5:34300825-34301098 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	199
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	81, 6
Conread position:	50-297
Cow position:	chr5:27306209-27306461 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	176
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	50, 112
Conread position:	54-293
Cow position:	chr5:55176806-55177036 (view UCSC Genome Browser custom track)
Alignm length:	244
Alignm identity:	169
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	75, 19
Conread position:	54-294
Cow position:	chr5:26990308-26990540 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	169
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	73, 19
Conread position:	54-295
Cow position:	chr5:64758855-64758616 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	169
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	86, 19
Conread position:	54-305
Cow position:	chr5:55068622-55068869 (view UCSC Genome Browser custom track)
Alignm length:	252
Alignm identity:	170
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	33, 0
Conread position:	54-323
Cow position:	chr5:13717651-13717391 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	180
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	33, 0
Conread position:	54-347
Cow position:	chr5:17555115-17554832 (view UCSC Genome Browser custom track)
Alignm length:	296
Alignm identity:	217
Alignm E-value:	2.8026e-45
Alignm gaps (pig, cow):	82, 20
Conread position:	55-347
Cow position:	chr5:7057483-7057194 (view UCSC Genome Browser custom track)
Alignm length:	296
Alignm identity:	192
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	233, 45
Conread position:	56-331
Cow position:	chr5:37646630-37646353 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	201
Alignm E-value:	2.99878e-43
Alignm gaps (pig, cow):	69, 43
Conread position:	58-296
Cow position:	chr5:15722146-15721922 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	174
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	31, 0
Conread position:	63-345
Cow position:	chr5:20779475-20779198 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	193
Alignm E-value:	9e-34
Alignm gaps (pig, cow):	9, 123
Conread position:	67-304
Cow position:	chr5:4280374-4280611 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	169
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	10, 33