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Cow genome map

           
Conread name:
           
rcmu32_e21.y1
        

               
Conread position:
               
1-120
               

               
Cow position:
               
chr14:33538739-33538861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr14:40346980-40347132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr14:11819942-11820092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr14:21284808-21284650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr14:7482236-7482082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
87, 107
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr14:19222063-19221903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr14:38673450-38673606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
98, 86
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr14:14581047-14580884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr14:33828342-33828165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr14:33643601-33643785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr14:31785150-31784929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 130
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr14:29030012-29029790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr14:41325259-41325486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr14:26190918-26191145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr14:22966934-22966706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr14:10630944-10631170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:41180517-41180771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 185
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr14:5573123-5572883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr14:8750256-8750017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
112, 167
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr14:33338299-33338535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr14:24796246-24796490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
79, 102
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr14:25403760-25403997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr14:39778931-39778690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
113, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr14:5836082-5835847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
108, 59
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr14:18904430-18904671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr14:34355512-34355776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 112
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr14:48412699-48412950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr14:35018574-35018822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:16834516-16834251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:17841108-17841362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 162
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr14:38355366-38355117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr14:10702652-10702912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr14:1868202-1868458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
27, 19
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr14:16256947-16256684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr14:19372522-19372264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr14:27312607-27312338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr14:34984044-34983792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
194, 91
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr14:44848190-44848446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr14:19129692-19129427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr14:23107510-23107243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr14:28795854-28795593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr14:40283801-40283539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr14:4991179-4990922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr14:27591773-27592038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr14:19863249-19863518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr14:44084298-44084574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr14:1859433-1859701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
30, 87
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr14:28004158-28003874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr14:22583322-22583061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
236, 42
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr14:33830478-33830208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr14:37883734-37884008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
32, 65
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr14:40165603-40165330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
173, 22
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr14:18657422-18657700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr14:15054808-15055087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
227, 238
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr14:36554974-36555248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr14:45605272-45604998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
113, 137
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr14:26490562-26490847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr14:4202912-4203216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 262
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr14:16033189-16032890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
114, 159
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr14:37447288-37447587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr14:19189217-19188930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 41
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr14:24608147-24607836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
83, 90
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr14:41128074-41127779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 28
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr14:1646011-1646319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
220, 105
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr14:12520127-12520441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr14:26628343-26628663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr14:26941045-26941358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr14:27848379-27848041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr14:42247171-42246866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr14:44742201-44742510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr14:46685479-46685160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
253, 109
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr14:26433063-26433388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
236, 39
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr14:8101970-8101654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
170, 64
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr14:36254526-36254838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr14:25002215-25001881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
265, 41
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr14:48427254-48426920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr14:8786370-8786690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr14:15492777-15492438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
106, 97
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr14:41966421-41966072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
163, 64
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr14:16237325-16237664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
28, 59
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr14:41749577-41749910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
53, 97
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:6735679-6736024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:10078448-10078098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 26
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:14466297-14466616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
277, 22
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:14621993-14622324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:28987873-28987533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:33247252-33247576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:38168862-38168548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:38379202-38378848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
163, 72
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:42330532-42330190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
195, 66
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr14:48740690-48741022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 105
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr14:28115005-28115348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 111
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr14:4227022-4227388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
27, 305
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr14:5630342-5630004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr14:16549823-16550160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr14:39770052-39770387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
309, 97
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr14:42596561-42596228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr14:14182526-14182183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr14:39918582-39918906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
338, 37
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr14:3195029-3194702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
341, 58
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr14:32452434-32452080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 261
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr14:33714502-33714843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
116, 41
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr14:41211034-41210693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
178, 73
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr14:24981638-24981280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr14:35498320-35498666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr14:8541029-8541382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 110
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr14:13846168-13845820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr14:18345553-18345898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 73
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr14:19321325-19321685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr14:48838776-48838416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
304, 99
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr14:15997586-15997927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr14:18941122-18941468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr14:27919556-27919910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr14:18309118-18309473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr14:20826656-20826316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr14:20932796-20932445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr14:24237006-24236646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr14:24417065-24416716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
113, 80
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr14:25986698-25986329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr14:47672704-47673056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr14:24922284-24921917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr14:35420580-35420942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 101
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr14:13810119-13809773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 138
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr14:20712506-20712863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 157
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr14:4877050-4877411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr14:13042937-13042575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
108, 99
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr14:20666843-20667194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
341, 87
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr14:33773873-33774210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr14:38143931-38144296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr14:41471787-41472157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr14:28304608-28304973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr14:38747847-38747490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr14:42154783-42155149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 195
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr14:38921130-38920770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
147, 87
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr14:1802934-1803309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr14:11846679-11846307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr14:35381771-35381398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 30
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr14:45052624-45052248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 120
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr14:47584472-47584849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
4-117
               

               
Cow position:
               
chr14:22952815-22952929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
4-159
               

               
Cow position:
               
chr14:24992001-24991847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr14:43249760-43249532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr14:21964299-21964063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr14:12035586-12035336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr14:39926373-39926135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
4-259
               

               
Cow position:
               
chr14:46654367-46654616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
232, 30
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr14:37131833-37131583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr14:29632708-29632960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr14:40433098-40432844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
224, 94
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr14:9539011-9539280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr14:25779269-25778994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
255, 57
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr14:21933163-21933483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr14:23712865-23712557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr14:48689704-48689390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr14:27077163-27076815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
106, 59
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr14:2959689-2959368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
263, 50
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr14:2974917-2975242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr14:33791364-33791037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr14:36167116-36166784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr14:43046326-43046020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr14:10858610-10858272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr14:15913369-15913728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr14:20110545-20110896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 79
               

               
Conread position:
               
4-370
               

               
Cow position:
               
chr14:23682441-23682082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
5-109
               

               
Cow position:
               
chr14:12613916-12614021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr14:25385711-25385943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 34
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr14:21691096-21691355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
5-341
               

               
Cow position:
               
chr14:2937821-2937487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
123, 24
               

               
Conread position:
               
5-360
               

               
Cow position:
               
chr14:26116238-26115886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 123
               

               
Conread position:
               
5-365
               

               
Cow position:
               
chr14:45677400-45677050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
6-153
               

               
Cow position:
               
chr14:12250019-12250165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
6-155
               

               
Cow position:
               
chr14:37435120-37435274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr14:25231469-25231693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 175
               

               
Conread position:
               
6-253
               

               
Cow position:
               
chr14:49086484-49086238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
6-259
               

               
Cow position:
               
chr14:39037412-39037151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 178
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr14:39618199-39618457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr14:20467929-20468179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
6-268
               

               
Cow position:
               
chr14:48961755-48961497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr14:19394536-19394273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
6-278
               

               
Cow position:
               
chr14:44258102-44257830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
109, 243
               

               
Conread position:
               
6-307
               

               
Cow position:
               
chr14:19618576-19618872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr14:41479484-41479788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr14:39434084-39434392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr14:15313730-15313404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr14:36437311-36437643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr14:49824450-49824769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr14:12324601-12324246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr14:19593960-19594300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
6-353
               

               
Cow position:
               
chr14:12036669-12036996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
6-357
               

               
Cow position:
               
chr14:20010133-20010488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 283
               

               
Conread position:
               
6-357
               

               
Cow position:
               
chr14:33341934-33341577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 188
               

               
Conread position:
               
6-360
               

               
Cow position:
               
chr14:12667908-12667556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr14:11043317-11043668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr14:12342641-12343016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
22, 291
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr14:36289624-36289966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr14:6599775-6600127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr14:7290968-7290624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr14:40230462-40230809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr14:40329620-40329264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr14:21357727-21357381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr14:18485068-18485432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
6-365
               

               
Cow position:
               
chr14:20016525-20016888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chr14:31130204-31130555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 23
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr14:50418580-50418236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr14:19850852-19851209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
6-369
               

               
Cow position:
               
chr14:20640451-20640809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 163
               

               
Conread position:
               
6-369
               

               
Cow position:
               
chr14:33456864-33457227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr14:13385546-13385182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr14:3868250-3868618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr14:14949034-14949404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr14:6490527-6490891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr14:47609414-47609771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr14:14326931-14327316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr14:14417321-14417685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
242, 28
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr14:20301833-20302195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr14:26442166-26442536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr14:37103386-37103018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
7-107
               

               
Cow position:
               
chr14:19624261-19624160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
7-159
               

               
Cow position:
               
chr14:26456685-26456534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
7-219
               

               
Cow position:
               
chr14:3564450-3564249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
7-246
               

               
Cow position:
               
chr14:20384808-20385047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
7-254
               

               
Cow position:
               
chr14:49021727-49021968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
7-321
               

               
Cow position:
               
chr14:25682106-25681788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
7-341
               

               
Cow position:
               
chr14:8945906-8946237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr14:46973612-46973285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
7-372
               

               
Cow position:
               
chr14:11508071-11508423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
7-373
               

               
Cow position:
               
chr14:48492612-48492985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
20, 120
               

               
Conread position:
               
7-375
               

               
Cow position:
               
chr14:11810396-11810751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
7-375
               

               
Cow position:
               
chr14:45045781-45045406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
7-376
               

               
Cow position:
               
chr14:12511726-12512081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
8-242
               

               
Cow position:
               
chr14:10697341-10697560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
8-244
               

               
Cow position:
               
chr14:49767630-49767403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
97, 35
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr14:40269670-40269920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
8-271
               

               
Cow position:
               
chr14:15825459-15825194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 107
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr14:24387622-24387295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
154, 102
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr14:27355578-27355238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr14:38530140-38529823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
8-358
               

               
Cow position:
               
chr14:25979441-25979095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr14:1715906-1715558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
24, 103
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr14:5234708-5235051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr14:48446989-48447342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
8-364
               

               
Cow position:
               
chr14:17554317-17554668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
8-376
               

               
Cow position:
               
chr14:15932050-15931683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
8-376
               

               
Cow position:
               
chr14:21498442-21498802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
8-376
               

               
Cow position:
               
chr14:47276530-47276890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
9-139
               

               
Cow position:
               
chr14:37467588-37467717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 104
               

               
Conread position:
               
9-159
               

               
Cow position:
               
chr14:23591407-23591259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
9-264
               

               
Cow position:
               
chr14:9308399-9308149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
250, 36
               

               
Conread position:
               
9-366
               

               
Cow position:
               
chr14:26859551-26859917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
9-367
               

               
Cow position:
               
chr14:22989207-22988854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 91
               

               
Conread position:
               
10-340
               

               
Cow position:
               
chr14:34199677-34200012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
215, 92
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr14:23090209-23090568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
137, 65
               

               
Conread position:
               
11-266
               

               
Cow position:
               
chr14:46998217-46997957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
11-273
               

               
Cow position:
               
chr14:14317054-14316798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
11-306
               

               
Cow position:
               
chr14:7420881-7421177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
11-372
               

               
Cow position:
               
chr14:9020197-9019855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
330, 9
               

               
Conread position:
               
11-375
               

               
Cow position:
               
chr14:40253392-40253032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
12-259
               

               
Cow position:
               
chr14:20600556-20600310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
12-363
               

               
Cow position:
               
chr14:7480186-7479832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
14-254
               

               
Cow position:
               
chr14:33309339-33309573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
14-324
               

               
Cow position:
               
chr14:13582583-13582892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
14-359
               

               
Cow position:
               
chr14:48773072-48772741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
306, 97
               

               
Conread position:
               
14-372
               

               
Cow position:
               
chr14:15944501-15944851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
16-325
               

               
Cow position:
               
chr14:17755727-17755438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
16-372
               

               
Cow position:
               
chr14:7620960-7621319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
17-259
               

               
Cow position:
               
chr14:19951733-19951491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
186, 16
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr14:41302665-41302993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
17-374
               

               
Cow position:
               
chr14:24748068-24748409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
18-354
               

               
Cow position:
               
chr14:35503528-35503196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 251
               

               
Conread position:
               
19-323
               

               
Cow position:
               
chr14:7695424-7695127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
189, 42
               

               
Conread position:
               
19-362
               

               
Cow position:
               
chr14:23424421-23424092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 86
               

               
Conread position:
               
19-363
               

               
Cow position:
               
chr14:23443182-23442851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 86
               

               
Conread position:
               
19-365
               

               
Cow position:
               
chr14:27823597-27823254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
21-112
               

               
Cow position:
               
chr14:35022057-35021966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-260
               

               
Cow position:
               
chr14:45718104-45718339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
21-346
               

               
Cow position:
               
chr14:50362954-50362633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
21-364
               

               
Cow position:
               
chr14:13006666-13006347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 123
               

               
Conread position:
               
21-364
               

               
Cow position:
               
chr14:38548953-38548615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 85
               

               
Conread position:
               
21-370
               

               
Cow position:
               
chr14:19851772-19852119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
135, 123
               

               
Conread position:
               
22-376
               

               
Cow position:
               
chr14:30760377-30760022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 44
               

               
Conread position:
               
23-160
               

               
Cow position:
               
chr14:5667724-5667861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
23-251
               

               
Cow position:
               
chr14:50055551-50055332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
23-267
               

               
Cow position:
               
chr14:27275320-27275080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
59, 87
               

               
Conread position:
               
23-278
               

               
Cow position:
               
chr14:26097537-26097789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
232, 36
               

               
Conread position:
               
23-278
               

               
Cow position:
               
chr14:42437185-42436931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 135
               

               
Conread position:
               
23-338
               

               
Cow position:
               
chr14:26796615-26796951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
23-340
               

               
Cow position:
               
chr14:15504001-15504310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
91, 36
               

               
Conread position:
               
23-343
               

               
Cow position:
               
chr14:22941563-22941896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
23-343
               

               
Cow position:
               
chr14:28784332-28784644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
23-354
               

               
Cow position:
               
chr14:28378519-28378191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 95
               

               
Conread position:
               
23-357
               

               
Cow position:
               
chr14:49817542-49817854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
144, 20
               

               
Conread position:
               
23-367
               

               
Cow position:
               
chr14:10609843-10609497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
23-374
               

               
Cow position:
               
chr14:3948943-3949289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
322, 41
               

               
Conread position:
               
24-258
               

               
Cow position:
               
chr14:14187490-14187257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
205, 141
               

               
Conread position:
               
24-341
               

               
Cow position:
               
chr14:5222131-5222439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
92, 72
               

               
Conread position:
               
24-360
               

               
Cow position:
               
chr14:34331167-34331519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
24-366
               

               
Cow position:
               
chr14:40754085-40754423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 239
               

               
Conread position:
               
24-372
               

               
Cow position:
               
chr14:30757000-30756657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
25-263
               

               
Cow position:
               
chr14:32553153-32553385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
25-278
               

               
Cow position:
               
chr14:18763288-18763528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
25-334
               

               
Cow position:
               
chr14:40486497-40486790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
25-352
               

               
Cow position:
               
chr14:49929584-49929910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
84, 217
               

               
Conread position:
               
25-360
               

               
Cow position:
               
chr14:20556787-20556461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
25-364
               

               
Cow position:
               
chr14:37446528-37446851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
122, 63
               

               
Conread position:
               
25-365
               

               
Cow position:
               
chr14:5995974-5995627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 224
               

               
Conread position:
               
25-373
               

               
Cow position:
               
chr14:27338498-27338153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 81
               

               
Conread position:
               
26-340
               

               
Cow position:
               
chr14:12954226-12954528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
5, 38
               

               
Conread position:
               
26-348
               

               
Cow position:
               
chr14:29592568-29592877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 115
               

               
Conread position:
               
26-366
               

               
Cow position:
               
chr14:6655428-6655771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
141, 36
               

               
Conread position:
               
27-324
               

               
Cow position:
               
chr14:41809501-41809792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
27-356
               

               
Cow position:
               
chr14:26222899-26222566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
72, 197
               

               
Conread position:
               
28-266
               

               
Cow position:
               
chr14:41252835-41253074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
28-340
               

               
Cow position:
               
chr14:11056586-11056886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
243, 82
               

               
Conread position:
               
29-343
               

               
Cow position:
               
chr14:6541571-6541883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
199, 81
               

               
Conread position:
               
29-343
               

               
Cow position:
               
chr14:7036202-7036516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 137
               

               
Conread position:
               
30-353
               

               
Cow position:
               
chr14:20954838-20954516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
71, 46
               

               
Conread position:
               
30-362
               

               
Cow position:
               
chr14:35532884-35533215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 80
               

               
Conread position:
               
30-368
               

               
Cow position:
               
chr14:12244230-12244562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 145
               

               
Conread position:
               
31-343
               

               
Cow position:
               
chr14:37422637-37422929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
31-376
               

               
Cow position:
               
chr14:47252074-47252427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
69, 81
               

               
Conread position:
               
32-365
               

               
Cow position:
               
chr14:11469998-11470328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
32-370
               

               
Cow position:
               
chr14:5025432-5025095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
179, 61
               

               
Conread position:
               
33-246
               

               
Cow position:
               
chr14:2038666-2038870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
34-252
               

               
Cow position:
               
chr14:1977923-1978141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 75
               

               
Conread position:
               
34-343
               

               
Cow position:
               
chr14:26654984-26655293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 57
               

               
Conread position:
               
36-299
               

               
Cow position:
               
chr14:25111646-25111384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
37-373
               

               
Cow position:
               
chr14:28153601-28153931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
39-370
               

               
Cow position:
               
chr14:11285717-11285397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 15
               

               
Conread position:
               
43-360
               

               
Cow position:
               
chr14:44713555-44713243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
44-343
               

               
Cow position:
               
chr14:12634749-12635033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
130, 62
               

               
Conread position:
               
45-343
               

               
Cow position:
               
chr14:40474698-40474406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
45-375
               

               
Cow position:
               
chr14:1708520-1708850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 43
               

               
Conread position:
               
45-376
               

               
Cow position:
               
chr14:48496012-48496342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
289, 42
               

               
Conread position:
               
46-340
               

               
Cow position:
               
chr14:24945355-24945647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
182, 27
               

               
Conread position:
               
46-373
               

               
Cow position:
               
chr14:12855658-12855980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
285, 53
               

               
Conread position:
               
47-343
               

               
Cow position:
               
chr14:33229261-33229556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
47-368
               

               
Cow position:
               
chr14:22865731-22866053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 148
               

               
Conread position:
               
51-342
               

               
Cow position:
               
chr14:42419143-42419434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
219, 49
               

               
Conread position:
               
51-360
               

               
Cow position:
               
chr14:47170221-47170526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
51-362
               

               
Cow position:
               
chr14:16524606-16524294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
52-340
               

               
Cow position:
               
chr14:16352475-16352205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
54-361
               

               
Cow position:
               
chr14:12081010-12081299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
203, 45
               

               
Conread position:
               
54-361
               

               
Cow position:
               
chr14:19193601-19193289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
55-363
               

               
Cow position:
               
chr14:50414921-50414617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
55-374
               

               
Cow position:
               
chr14:13465090-13465415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
57-268
               

               
Cow position:
               
chr14:15039486-15039697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
57-319
               

               
Cow position:
               
chr14:40001853-40002111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
57-356
               

               
Cow position:
               
chr14:27504106-27504407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 43
               

               
Conread position:
               
57-358
               

               
Cow position:
               
chr14:4282383-4282681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
207, 61
               

               
Conread position:
               
57-361
               

               
Cow position:
               
chr14:12072825-12073130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 55
               

               
Conread position:
               
57-373
               

               
Cow position:
               
chr14:44557686-44558009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
59-316
               

               
Cow position:
               
chr14:49727529-49727283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
61-357
               

               
Cow position:
               
chr14:10693138-10693428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
282, 39
               

               
Conread position:
               
61-363
               

               
Cow position:
               
chr14:39415279-39414980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 34
               

               
Conread position:
               
61-365
               

               
Cow position:
               
chr14:36442896-36443195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
63-340
               

               
Cow position:
               
chr14:1796309-1796044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
63-364
               

               
Cow position:
               
chr14:49714098-49713803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
65-363
               

               
Cow position:
               
chr14:3498923-3498636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
278, 44
               

               
Conread position:
               
66-360
               

               
Cow position:
               
chr14:45312908-45312620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
279, 45
               

               
Conread position:
               
66-361
               

               
Cow position:
               
chr14:7067612-7067908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
131, 245
               

               
Conread position:
               
66-365
               

               
Cow position:
               
chr14:29965133-29964840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
66-366
               

               
Cow position:
               
chr14:4047866-4047567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
67-239
               

               
Cow position:
               
chr14:46062062-46061886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
67-348
               

               
Cow position:
               
chr14:12141779-12142077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
68-325
               

               
Cow position:
               
chr14:15306009-15306265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
52, 36
               

               
Conread position:
               
68-375
               

               
Cow position:
               
chr14:33837506-33837813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
176, 38
               

               
Conread position:
               
69-343
               

               
Cow position:
               
chr14:27394350-27394620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
98, 31
               

               
Conread position:
               
69-362
               

               
Cow position:
               
chr14:6865117-6864823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
35, 183
               

               
Conread position:
               
69-370
               

               
Cow position:
               
chr14:39452321-39452027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
70-321
               

               
Cow position:
               
chr14:22236374-22236617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
70-360
               

               
Cow position:
               
chr14:41486148-41486441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
181, 113
               

               
Conread position:
               
70-372
               

               
Cow position:
               
chr14:28465106-28465402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
71-361
               

               
Cow position:
               
chr14:38719316-38719023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
73-376
               

               
Cow position:
               
chr14:12146370-12146670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
73-376
               

               
Cow position:
               
chr14:27998932-27999230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
74-374
               

               
Cow position:
               
chr14:13928677-13928397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
51, 12
               

               
Conread position:
               
75-353
               

               
Cow position:
               
chr14:8923476-8923752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
99, 31
               

               
Conread position:
               
76-338
               

               
Cow position:
               
chr14:25228244-25227996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
76-358
               

               
Cow position:
               
chr14:17475449-17475737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 201
               

               
Conread position:
               
76-363
               

               
Cow position:
               
chr14:7342559-7342289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr14:25225837-25225547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 187
               

               
Conread position:
               
76-374
               

               
Cow position:
               
chr14:10852139-10851844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
77-348
               

               
Cow position:
               
chr14:12884374-12884103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
77-358
               

               
Cow position:
               
chr14:23103891-23104171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
77-370
               

               
Cow position:
               
chr14:23962958-23962671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
78-271
               

               
Cow position:
               
chr14:34448864-34449058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
78-321
               

               
Cow position:
               
chr14:15404802-15404560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
78-325
               

               
Cow position:
               
chr14:48744617-48744377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
78-363
               

               
Cow position:
               
chr14:7636391-7636676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
78-365
               

               
Cow position:
               
chr14:49488065-49487790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
78-366
               

               
Cow position:
               
chr14:13731001-13731274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
79-357
               

               
Cow position:
               
chr14:11643153-11643416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
79-366
               

               
Cow position:
               
chr14:29809402-29809113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 199
               

               
Conread position:
               
79-376
               

               
Cow position:
               
chr14:24527058-24527352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
81-266
               

               
Cow position:
               
chr14:3943452-3943632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
82-343
               

               
Cow position:
               
chr14:27733708-27733452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 13
               

               
Conread position:
               
83-325
               

               
Cow position:
               
chr14:41190985-41191236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
83-361
               

               
Cow position:
               
chr14:7198601-7198320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
83-370
               

               
Cow position:
               
chr14:33546255-33546542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 27
               

               
Conread position:
               
83-376
               

               
Cow position:
               
chr14:14318721-14318435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
85-361
               

               
Cow position:
               
chr14:21371684-21371956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
88-348
               

               
Cow position:
               
chr14:34775654-34775910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
88-365
               

               
Cow position:
               
chr14:6360497-6360211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
89-343
               

               
Cow position:
               
chr14:21224733-21224487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 122
               

               
Conread position:
               
91-325
               

               
Cow position:
               
chr14:6085892-6086120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
92-373
               

               
Cow position:
               
chr14:20576859-20577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
96-371
               

               
Cow position:
               
chr14:20481754-20482035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
97-368
               

               
Cow position:
               
chr14:6899159-6898891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
97-372
               

               
Cow position:
               
chr14:17335265-17335541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
98-371
               

               
Cow position:
               
chr14:28694631-28694908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
237, 8
               

               
Conread position:
               
99-341
               

               
Cow position:
               
chr14:28924250-28924011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
99-343
               

               
Cow position:
               
chr14:10937764-10937514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
99-357
               

               
Cow position:
               
chr14:23419882-23419621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
100-326
               

               
Cow position:
               
chr14:5553403-5553178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
100-376
               

               
Cow position:
               
chr14:27885101-27884826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
101-368
               

               
Cow position:
               
chr14:19592544-19592271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 242
               

               
Conread position:
               
101-368
               

               
Cow position:
               
chr14:26172312-26172579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
242, 5
               

               
Conread position:
               
104-339
               

               
Cow position:
               
chr14:20467009-20466784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
105-367
               

               
Cow position:
               
chr14:49941087-49940832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
106-271
               

               
Cow position:
               
chr14:34399718-34399885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
106-359
               

               
Cow position:
               
chr14:15424172-15423919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
40, 31
               

               
Conread position:
               
106-362
               

               
Cow position:
               
chr14:24745016-24744759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
106-375
               

               
Cow position:
               
chr14:38285890-38286168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 250
               

               
Conread position:
               
107-259
               

               
Cow position:
               
chr14:11031204-11031356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-376
               

               
Cow position:
               
chr14:26825268-26824998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
236, 0
               

               
Conread position:
               
108-376
               

               
Cow position:
               
chr14:23078716-23078979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
110-367
               

               
Cow position:
               
chr14:42439838-42440100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
110-375
               

               
Cow position:
               
chr14:10387733-10387471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
110-376
               

               
Cow position:
               
chr14:20984412-20984146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
233, 112
               

               
Conread position:
               
110-376
               

               
Cow position:
               
chr14:28131215-28131488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
111-282
               

               
Cow position:
               
chr14:5557048-5557218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
111-373
               

               
Cow position:
               
chr14:37106675-37106417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
111-374
               

               
Cow position:
               
chr14:18937077-18937343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
112-340
               

               
Cow position:
               
chr14:21535234-21535456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
117, 108
               

               
Conread position:
               
112-351
               

               
Cow position:
               
chr14:13822805-13822561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
112-360
               

               
Cow position:
               
chr14:12033169-12033417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
112-367
               

               
Cow position:
               
chr14:14812148-14812403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
154, 164
               

               
Conread position:
               
112-370
               

               
Cow position:
               
chr14:29734292-29734542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
113-278
               

               
Cow position:
               
chr14:45577021-45577186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr14:11729039-11729263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
113-352
               

               
Cow position:
               
chr14:10706945-10706714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
113-352
               

               
Cow position:
               
chr14:40191656-40191430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
113-363
               

               
Cow position:
               
chr14:20501048-20500799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
113-367
               

               
Cow position:
               
chr14:28244795-28245048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
114-326
               

               
Cow position:
               
chr14:16749615-16749835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
114-358
               

               
Cow position:
               
chr14:18558991-18559228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
114-361
               

               
Cow position:
               
chr14:4848417-4848174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
228, 48
               

               
Conread position:
               
115-349
               

               
Cow position:
               
chr14:24712555-24712797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
115-360
               

               
Cow position:
               
chr14:22916222-22916467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr14:25903599-25903368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
116-365
               

               
Cow position:
               
chr14:26919065-26918815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
135, 59
               

               
Conread position:
               
116-372
               

               
Cow position:
               
chr14:43868377-43868118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
174, 89
               

               
Conread position:
               
118-326
               

               
Cow position:
               
chr14:42423157-42422949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
118-340
               

               
Cow position:
               
chr14:5958921-5959146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
118-341
               

               
Cow position:
               
chr14:10799234-10799012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
187, 0
               

               
Conread position:
               
119-343
               

               
Cow position:
               
chr14:18302026-18301800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 198
               

               
Conread position:
               
120-375
               

               
Cow position:
               
chr14:11577132-11576884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
121-373
               

               
Cow position:
               
chr14:19206936-19206678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
122-332
               

               
Cow position:
               
chr14:30152167-30151959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
126-343
               

               
Cow position:
               
chr14:14224626-14224411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
127-357
               

               
Cow position:
               
chr14:20234136-20234366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
215, 148
               

               
Conread position:
               
127-363
               

               
Cow position:
               
chr14:15469925-15470159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
152, 58
               

               
Conread position:
               
128-373
               

               
Cow position:
               
chr14:35065745-35065501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
132-353
               

               
Cow position:
               
chr14:24732289-24732068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-341
               

               
Cow position:
               
chr14:24537216-24537008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-366
               

               
Cow position:
               
chr14:20245118-20245345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
134-343
               

               
Cow position:
               
chr14:7127908-7127704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
137-361
               

               
Cow position:
               
chr14:44615100-44615326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
140-366
               

               
Cow position:
               
chr14:145467-145690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
171, 106
               

               
Conread position:
               
144-342
               

               
Cow position:
               
chr14:7094017-7094219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
144-372
               

               
Cow position:
               
chr14:7316834-7316612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
145-333
               

               
Cow position:
               
chr14:38673882-38674076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
114, 7
               

               
Conread position:
               
145-337
               

               
Cow position:
               
chr14:37436671-37436872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
145-343
               

               
Cow position:
               
chr14:39422843-39423051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
145-359
               

               
Cow position:
               
chr14:1814622-1814831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
114, 164
               

               
Conread position:
               
145-361
               

               
Cow position:
               
chr14:16205031-16205246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
198, 60
               

               
Conread position:
               
145-365
               

               
Cow position:
               
chr14:18412552-18412771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
145-376
               

               
Cow position:
               
chr14:28957929-28957698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-358
               

               
Cow position:
               
chr14:27364615-27364406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
147-370
               

               
Cow position:
               
chr14:35651748-35651963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
148-370
               

               
Cow position:
               
chr14:21556990-21557210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
194, 72
               

               
Conread position:
               
150-335
               

               
Cow position:
               
chr14:3871695-3871880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-361
               

               
Cow position:
               
chr14:22202096-22202304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
109, 120
               

               
Conread position:
               
150-362
               

               
Cow position:
               
chr14:24597742-24597954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
150-364
               

               
Cow position:
               
chr14:12496519-12496306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
150-372
               

               
Cow position:
               
chr14:24785692-24785476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
150-376
               

               
Cow position:
               
chr14:18270395-18270171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
152-340
               

               
Cow position:
               
chr14:20071103-20070909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 167
               

               
Conread position:
               
152-376
               

               
Cow position:
               
chr14:30450665-30450443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
153-343
               

               
Cow position:
               
chr14:20736642-20736458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
153-343
               

               
Cow position:
               
chr14:41156693-41156876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
154-326
               

               
Cow position:
               
chr14:9403494-9403322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
154-367
               

               
Cow position:
               
chr14:19703511-19703726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
167-316
               

               
Cow position:
               
chr14:25285015-25284866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chr14:8027543-8027742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
96, 81
               

               
Conread position:
               
172-340
               

               
Cow position:
               
chr14:49500994-49501161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
150, 102
               

               
Conread position:
               
172-343
               

               
Cow position:
               
chr14:23465037-23465208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 118
               

               
Conread position:
               
175-369
               

               
Cow position:
               
chr14:9030290-9030103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
172, 35
               

               
Conread position:
               
176-325
               

               
Cow position:
               
chr14:50519171-50519315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
176-348
               

               
Cow position:
               
chr14:22230900-22231069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
176-366
               

               
Cow position:
               
chr14:11981475-11981285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
176-373
               

               
Cow position:
               
chr14:29011035-29011231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
177-309
               

               
Cow position:
               
chr14:40952278-40952144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
177-321
               

               
Cow position:
               
chr14:46432077-46431933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
177-323
               

               
Cow position:
               
chr14:15228547-15228407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
177-324
               

               
Cow position:
               
chr14:11280106-11280250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
76, 93
               

               
Conread position:
               
177-332
               

               
Cow position:
               
chr14:14632911-14633066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
177-340
               

               
Cow position:
               
chr14:30023190-30023353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
177-343
               

               
Cow position:
               
chr14:25912658-25912498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
177-353
               

               
Cow position:
               
chr14:32784108-32784284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
177-360
               

               
Cow position:
               
chr14:8949657-8949476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
165, 63
               

               
Conread position:
               
177-360
               

               
Cow position:
               
chr14:15428485-15428306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
177-360
               

               
Cow position:
               
chr14:36425400-36425576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
177-364
               

               
Cow position:
               
chr14:8590841-8591022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
177-364
               

               
Cow position:
               
chr14:27653171-27652983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
177-366
               

               
Cow position:
               
chr14:8083205-8083016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
166, 71
               

               
Conread position:
               
177-367
               

               
Cow position:
               
chr14:27303665-27303471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 151
               

               
Conread position:
               
177-368
               

               
Cow position:
               
chr14:27609178-27608995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 85
               

               
Conread position:
               
177-368
               

               
Cow position:
               
chr14:47224358-47224550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 172
               

               
Conread position:
               
177-373
               

               
Cow position:
               
chr14:20010498-20010695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
177-376
               

               
Cow position:
               
chr14:6234213-6234411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
178-325
               

               
Cow position:
               
chr14:20513236-20513089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
178-326
               

               
Cow position:
               
chr14:21530067-21530215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
178-343
               

               
Cow position:
               
chr14:7358030-7357862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
178-343
               

               
Cow position:
               
chr14:27847356-27847200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
178-353
               

               
Cow position:
               
chr14:5668112-5668288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
178-354
               

               
Cow position:
               
chr14:4491442-4491266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
134, 85
               

               
Conread position:
               
178-361
               

               
Cow position:
               
chr14:21592997-21593174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
178-362
               

               
Cow position:
               
chr14:29282761-29282576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
178-362
               

               
Cow position:
               
chr14:35421076-35421260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
30, 80
               

               
Conread position:
               
178-366
               

               
Cow position:
               
chr14:23638328-23638516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
178-368
               

               
Cow position:
               
chr14:20914971-20915165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
178-370
               

               
Cow position:
               
chr14:11831783-11831977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
45, 174
               

               
Conread position:
               
178-371
               

               
Cow position:
               
chr14:16344140-16344333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
142, 161
               

               
Conread position:
               
178-371
               

               
Cow position:
               
chr14:33414215-33414407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
178-371
               

               
Cow position:
               
chr14:33618309-33618124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
178-376
               

               
Cow position:
               
chr14:31228088-31228275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
179-343
               

               
Cow position:
               
chr14:31342217-31342053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
179-361
               

               
Cow position:
               
chr14:7271245-7271433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
179-370
               

               
Cow position:
               
chr14:19988054-19988247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
179-374
               

               
Cow position:
               
chr14:9510548-9510359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
179-376
               

               
Cow position:
               
chr14:37151935-37152123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 33
               

               
Conread position:
               
180-361
               

               
Cow position:
               
chr14:16287487-16287311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
180-362
               

               
Cow position:
               
chr14:41756153-41755982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
180-363
               

               
Cow position:
               
chr14:10920559-10920743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 164
               

               
Conread position:
               
183-343
               

               
Cow position:
               
chr14:37504516-37504356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
183-360
               

               
Cow position:
               
chr14:37236371-37236200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
183-369
               

               
Cow position:
               
chr14:47894117-47893932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
183-370
               

               
Cow position:
               
chr14:24602237-24602422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
160, 44
               

               
Conread position:
               
184-344
               

               
Cow position:
               
chr14:11604882-11604727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
139, 68
               

               
Conread position:
               
184-361
               

               
Cow position:
               
chr14:36151325-36151150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
185-343
               

               
Cow position:
               
chr14:24746465-24746300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
185-366
               

               
Cow position:
               
chr14:41871588-41871774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 27
               

               
Conread position:
               
186-324
               

               
Cow position:
               
chr14:24399304-24399441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
186-341
               

               
Cow position:
               
chr14:9052253-9052405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
186-343
               

               
Cow position:
               
chr14:7581919-7582077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 114
               

               
Conread position:
               
186-343
               

               
Cow position:
               
chr14:20483700-20483861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
186-343
               

               
Cow position:
               
chr14:39996608-39996453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
186-343
               

               
Cow position:
               
chr14:46946127-46946289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
186-352
               

               
Cow position:
               
chr14:15518402-15518568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-361
               

               
Cow position:
               
chr14:26800297-26800123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
186-363
               

               
Cow position:
               
chr14:11296442-11296261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
122, 164
               

               
Conread position:
               
186-363
               

               
Cow position:
               
chr14:23839165-23839348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
186-363
               

               
Cow position:
               
chr14:29622456-29622627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
186-364
               

               
Cow position:
               
chr14:45955289-45955112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
137, 160
               

               
Conread position:
               
186-366
               

               
Cow position:
               
chr14:10939863-10940043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-367
               

               
Cow position:
               
chr14:4481669-4481491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
159, 81
               

               
Conread position:
               
186-367
               

               
Cow position:
               
chr14:10440926-10440740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
186-369
               

               
Cow position:
               
chr14:36559228-36559407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
186-373
               

               
Cow position:
               
chr14:7433311-7433498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-374
               

               
Cow position:
               
chr14:40107117-40107298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
187-340
               

               
Cow position:
               
chr14:2853147-2852997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
187-343
               

               
Cow position:
               
chr14:19774222-19774373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
187-355
               

               
Cow position:
               
chr14:7019789-7019953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
187-359
               

               
Cow position:
               
chr14:19832396-19832564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
187-375
               

               
Cow position:
               
chr14:39097505-39097312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
188-376
               

               
Cow position:
               
chr14:16769869-16770057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
190-315
               

               
Cow position:
               
chr14:25277764-25277645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
190-343
               

               
Cow position:
               
chr14:15795926-15796079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
190-343
               

               
Cow position:
               
chr14:47200130-47200290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
190-344
               

               
Cow position:
               
chr14:25290809-25290651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
190-366
               

               
Cow position:
               
chr14:13515995-13516170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
190-371
               

               
Cow position:
               
chr14:28401804-28401623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 86
               

               
Conread position:
               
190-376
               

               
Cow position:
               
chr14:12071530-12071718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
191-353
               

               
Cow position:
               
chr14:5575732-5575569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
191-357
               

               
Cow position:
               
chr14:33328952-33328796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
191-360
               

               
Cow position:
               
chr14:11079445-11079283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
191-369
               

               
Cow position:
               
chr14:11472235-11472411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
83, 76
               

               
Conread position:
               
192-366
               

               
Cow position:
               
chr14:13839651-13839824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
192-370
               

               
Cow position:
               
chr14:12138009-12137835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr14:40182748-40182562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
20, 164
               

               
Conread position:
               
193-341
               

               
Cow position:
               
chr14:10953687-10953542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
49, 116
               

               
Conread position:
               
193-363
               

               
Cow position:
               
chr14:21968518-21968682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
193-366
               

               
Cow position:
               
chr14:5044662-5044497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
193-371
               

               
Cow position:
               
chr14:15392204-15392021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
193-372
               

               
Cow position:
               
chr14:24754947-24754765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
194-372
               

               
Cow position:
               
chr14:16593372-16593195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
195-374
               

               
Cow position:
               
chr14:21946381-21946209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
199-348
               

               
Cow position:
               
chr14:34697462-34697314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
207-341
               

               
Cow position:
               
chr14:36723387-36723253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
213-343
               

               
Cow position:
               
chr14:24757798-24757661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
214-372
               

               
Cow position:
               
chr14:19924058-19924217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
217-366
               

               
Cow position:
               
chr14:6388918-6389061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
251-375
               

               
Cow position:
               
chr14:30050012-30050136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.