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Cow genome map

           
Conread name:
           
rcmu32_e21.y1
        

               
Conread position:
               
1-101
               

               
Cow position:
               
chr24:20969962-20969862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr24:27967915-27968072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr24:39219006-39218850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr24:18405480-18405319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr24:34315189-34315348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr24:18695456-18695612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr24:27719918-27719767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr24:35073929-35074087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
27, 110
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr24:42007576-42007741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr24:27270616-27270778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr24:36554995-36554822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 22
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr24:6487760-6487950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr24:20024448-20024650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr24:29180725-29180942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr24:33222105-33221881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
212, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr24:43432629-43432853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr24:27054244-27054475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
54, 140
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr24:15508701-15508473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr24:201797-201557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr24:3430571-3430813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr24:27052658-27052418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr24:30897701-30897458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
232, 0
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr24:29679470-29679227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr24:28327247-28326994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:29673356-29673609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
25, 227
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:32370082-32369827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr24:28690528-28690773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr24:16895599-16895348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
170, 85
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr24:32124801-32124553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 61
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr24:18970671-18970416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr24:32070803-32071053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr24:15246797-15246550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
114, 34
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr24:17955606-17955352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr24:19769330-19769588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr24:27824295-27824555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr24:5754675-5754929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr24:29063811-29063565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr24:24250565-24250822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
106, 125
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr24:23187080-23186814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
131, 44
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr24:33153614-33153879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
227, 57
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr24:15373246-15373515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr24:18331561-18331831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
169, 57
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr24:33465771-33465512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr24:18771351-18771070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
99, 64
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr24:2108411-2108122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
160, 30
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr24:17832977-17832684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr24:29782001-29782311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
94, 109
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr24:28990401-28990711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 56
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr24:7476516-7476195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr24:17294355-17294040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 111
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr24:36173944-36173624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr24:40129959-40130291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr24:18357216-18356900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr24:23556490-23556181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
200, 41
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr24:31816426-31816738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr24:44987546-44987208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr24:24457409-24457071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr24:29595974-29595629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 110
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr24:37650507-37650846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 107
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr24:7913839-7914181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:211822-212144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
101, 110
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:2402537-2402203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
49, 115
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:11886998-11887327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:17311372-17311055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:18474908-18474555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 275
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:22689745-22689399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:25194106-25194440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 106
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:27906275-27906612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:28062789-28063124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
181, 87
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:31159454-31159804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:33098655-33098298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
28, 165
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr24:34396337-34396016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr24:20801509-20801166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
32, 87
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr24:17860418-17860079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr24:18999884-19000226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr24:30229308-30229658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
227, 270
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr24:29586830-29587185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr24:37945797-37945460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr24:11005503-11005864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr24:36404307-36403966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
115, 99
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr24:35985886-35985541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr24:19800683-19801032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr24:30235710-30236065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr24:39483314-39483658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
343, 97
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr24:6450333-6450704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr24:22647505-22647139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr24:7917528-7917183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr24:20225578-20225945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr24:24491173-24490826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 72
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr24:37037736-37038087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr24:10299920-10300279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr24:1269635-1269978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
162, 58
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr24:3165658-3166021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
119, 36
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr24:28721728-28722085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 107
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr24:11840015-11840390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr24:5141781-5142141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 97
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr24:27149234-27149590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr24:28303515-28303160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
198, 19
               

               
Conread position:
               
4-115
               

               
Cow position:
               
chr24:30226780-30226893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-167
               

               
Cow position:
               
chr24:27552735-27552895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 103
               

               
Conread position:
               
4-169
               

               
Cow position:
               
chr24:35794896-35794732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
100, 61
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr24:2096049-2095799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr24:43364199-43364445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
4-260
               

               
Cow position:
               
chr24:28253546-28253813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 70
               

               
Conread position:
               
4-278
               

               
Cow position:
               
chr24:18390449-18390189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr24:8886751-8887022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr24:31359166-31359457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr24:20874520-20874820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
198, 0
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr24:28496743-28496426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 84
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr24:3493732-3494055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr24:10499054-10499392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
163, 49
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr24:18485157-18484817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 171
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr24:42825654-42825341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
232, 104
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr24:43371087-43371417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
122, 106
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr24:40300999-40301351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
147, 108
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr24:16994726-16995075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 64
               

               
Conread position:
               
4-366
               

               
Cow position:
               
chr24:30484111-30483748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 168
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr24:352765-352407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr24:32822938-32822708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr24:31324122-31324364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
42, 215
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr24:14171853-14171602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
24, 171
               

               
Conread position:
               
5-258
               

               
Cow position:
               
chr24:27290709-27290963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
5-268
               

               
Cow position:
               
chr24:43200435-43200174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr24:5683119-5683393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
180, 18
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr24:35576694-35576394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
5-341
               

               
Cow position:
               
chr24:22079301-22079635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 108
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr24:19186802-19187122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
5-368
               

               
Cow position:
               
chr24:32204953-32204589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
254, 105
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr24:31812029-31812388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
6-135
               

               
Cow position:
               
chr24:39493136-39493266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
6-158
               

               
Cow position:
               
chr24:885844-885696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-191
               

               
Cow position:
               
chr24:10841374-10841182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 114
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr24:27341178-27340970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr24:15707601-15707386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
18, 102
               

               
Conread position:
               
6-240
               

               
Cow position:
               
chr24:28600022-28599786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
6-245
               

               
Cow position:
               
chr24:23616534-23616776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr24:18017069-18017332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr24:34008736-34008452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
6-305
               

               
Cow position:
               
chr24:20250058-20249757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr24:26554759-26554457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr24:42345163-42344857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr24:31036195-31036493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr24:44041171-44040855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 231
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr24:23442745-23442424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
6-340
               

               
Cow position:
               
chr24:28553705-28553401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr24:19179605-19179264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
6-341
               

               
Cow position:
               
chr24:25320835-25321157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
18, 95
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr24:16089078-16089404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
137, 50
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr24:41423451-41423769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
156, 102
               

               
Conread position:
               
6-348
               

               
Cow position:
               
chr24:33944246-33944585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 35
               

               
Conread position:
               
6-350
               

               
Cow position:
               
chr24:16509812-16510154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 260
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr24:25756446-25756115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr24:35332560-35332911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
6-353
               

               
Cow position:
               
chr24:27874441-27874758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr24:5633191-5632836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
18, 113
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr24:19633915-19634250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 42
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr24:19535410-19535060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr24:24155663-24155316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 98
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr24:32609484-32609844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 241
               

               
Conread position:
               
6-364
               

               
Cow position:
               
chr24:39143450-39143807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
6-365
               

               
Cow position:
               
chr24:9036038-9036382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
6-365
               

               
Cow position:
               
chr24:38814810-38815170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr24:15861759-15861391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr24:21519279-21519629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr24:18343891-18344266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr24:22114583-22114934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr24:37024865-37025224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr24:30314190-30313816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr24:38347524-38347885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr24:3152737-3152519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
122, 84
               

               
Conread position:
               
7-259
               

               
Cow position:
               
chr24:28289405-28289161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
7-339
               

               
Cow position:
               
chr24:39289895-39290217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr24:7777773-7777460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
229, 67
               

               
Conread position:
               
7-352
               

               
Cow position:
               
chr24:33621641-33621295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
7-353
               

               
Cow position:
               
chr24:27608255-27607928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
7-362
               

               
Cow position:
               
chr24:28699900-28700237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
7-363
               

               
Cow position:
               
chr24:12200570-12200215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 173
               

               
Conread position:
               
7-367
               

               
Cow position:
               
chr24:6132030-6131690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
7-376
               

               
Cow position:
               
chr24:6928703-6928343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
8-127
               

               
Cow position:
               
chr24:25524891-25525009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
8-277
               

               
Cow position:
               
chr24:39159702-39159439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
179, 74
               

               
Conread position:
               
8-278
               

               
Cow position:
               
chr24:8006155-8006418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
8-322
               

               
Cow position:
               
chr24:22225025-22225344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 93
               

               
Conread position:
               
8-324
               

               
Cow position:
               
chr24:20943011-20943315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
228, 104
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr24:18741727-18741409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr24:10671237-10671571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr24:18281791-18281461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr24:34761741-34762070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
8-349
               

               
Cow position:
               
chr24:27630247-27630579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
8-353
               

               
Cow position:
               
chr24:15057245-15057568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
8-354
               

               
Cow position:
               
chr24:11119128-11119481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr24:26929101-26928753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
15, 103
               

               
Conread position:
               
8-366
               

               
Cow position:
               
chr24:10518403-10518752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
8-369
               

               
Cow position:
               
chr24:27220247-27219887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
8-370
               

               
Cow position:
               
chr24:27918948-27919327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
13, 103
               

               
Conread position:
               
8-372
               

               
Cow position:
               
chr24:32054503-32054849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
9-246
               

               
Cow position:
               
chr24:43967656-43967424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
9-255
               

               
Cow position:
               
chr24:29389086-29389323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
162, 103
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr24:17104727-17104401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 110
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr24:18314104-18313746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
9-342
               

               
Cow position:
               
chr24:4724818-4725132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
9-350
               

               
Cow position:
               
chr24:25885316-25884968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
104, 164
               

               
Conread position:
               
10-243
               

               
Cow position:
               
chr24:19736483-19736257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
10-263
               

               
Cow position:
               
chr24:33230521-33230771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
10-312
               

               
Cow position:
               
chr24:19474821-19474519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 59
               

               
Conread position:
               
10-340
               

               
Cow position:
               
chr24:20588023-20588345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
102, 63
               

               
Conread position:
               
10-342
               

               
Cow position:
               
chr24:24755290-24755602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
10-343
               

               
Cow position:
               
chr24:17285148-17284809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 67
               

               
Conread position:
               
10-343
               

               
Cow position:
               
chr24:28699428-28699759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
10-343
               

               
Cow position:
               
chr24:34742601-34742923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
10-353
               

               
Cow position:
               
chr24:15692869-15693206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr24:27844676-27844344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
11-148
               

               
Cow position:
               
chr24:28023633-28023768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
11-281
               

               
Cow position:
               
chr24:14648502-14648244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr24:2675169-2675453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
241, 67
               

               
Conread position:
               
11-325
               

               
Cow position:
               
chr24:38841557-38841277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
11-336
               

               
Cow position:
               
chr24:17752266-17751941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
11-343
               

               
Cow position:
               
chr24:27726168-27725834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 108
               

               
Conread position:
               
13-340
               

               
Cow position:
               
chr24:37395359-37395036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
246, 10
               

               
Conread position:
               
13-348
               

               
Cow position:
               
chr24:35675394-35675710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
16-361
               

               
Cow position:
               
chr24:40592566-40592902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
17-258
               

               
Cow position:
               
chr24:24662276-24662039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
17-278
               

               
Cow position:
               
chr24:39791392-39791652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
231, 0
               

               
Conread position:
               
17-345
               

               
Cow position:
               
chr24:39850031-39849716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
18-260
               

               
Cow position:
               
chr24:43683614-43683369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
18-339
               

               
Cow position:
               
chr24:28233902-28234211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
19-367
               

               
Cow position:
               
chr24:38006850-38006514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 15
               

               
Conread position:
               
20-366
               

               
Cow position:
               
chr24:39523591-39523251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 86
               

               
Conread position:
               
21-259
               

               
Cow position:
               
chr24:41068130-41068353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
215, 45
               

               
Conread position:
               
21-317
               

               
Cow position:
               
chr24:16645466-16645170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 250
               

               
Conread position:
               
21-342
               

               
Cow position:
               
chr24:11045704-11045385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 90
               

               
Conread position:
               
21-358
               

               
Cow position:
               
chr24:27039908-27040238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
21-360
               

               
Cow position:
               
chr24:10470410-10470065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
21-372
               

               
Cow position:
               
chr24:6102686-6103026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
22-343
               

               
Cow position:
               
chr24:389959-390274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
22-343
               

               
Cow position:
               
chr24:29606186-29605859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 93
               

               
Conread position:
               
23-155
               

               
Cow position:
               
chr24:31382756-31382890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
23-219
               

               
Cow position:
               
chr24:41985849-41986048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 67
               

               
Conread position:
               
23-237
               

               
Cow position:
               
chr24:19344-19123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
23-253
               

               
Cow position:
               
chr24:29170829-29171048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
23-276
               

               
Cow position:
               
chr24:40850023-40850263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
230, 86
               

               
Conread position:
               
23-343
               

               
Cow position:
               
chr24:34390156-34390446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
318, 36
               

               
Conread position:
               
23-348
               

               
Cow position:
               
chr24:10125731-10126058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
184, 250
               

               
Conread position:
               
23-360
               

               
Cow position:
               
chr24:14550657-14550983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
23-366
               

               
Cow position:
               
chr24:19466062-19465713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 220
               

               
Conread position:
               
23-371
               

               
Cow position:
               
chr24:44809108-44809441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 83
               

               
Conread position:
               
23-374
               

               
Cow position:
               
chr24:32739413-32739056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr24:39905589-39905367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
177, 33
               

               
Conread position:
               
24-357
               

               
Cow position:
               
chr24:10242921-10242597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
24-374
               

               
Cow position:
               
chr24:36711061-36711401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
122, 80
               

               
Conread position:
               
25-325
               

               
Cow position:
               
chr24:17407255-17407547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
25-354
               

               
Cow position:
               
chr24:40537471-40537147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
131, 69
               

               
Conread position:
               
25-359
               

               
Cow position:
               
chr24:26880628-26880940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
25-369
               

               
Cow position:
               
chr24:5652126-5651808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
139, 32
               

               
Conread position:
               
27-335
               

               
Cow position:
               
chr24:36008349-36008652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
27-340
               

               
Cow position:
               
chr24:27713541-27713239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
27-372
               

               
Cow position:
               
chr24:23863771-23863423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
31-325
               

               
Cow position:
               
chr24:35631854-35632137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
160, 71
               

               
Conread position:
               
31-342
               

               
Cow position:
               
chr24:32190936-32191231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
31-343
               

               
Cow position:
               
chr24:41980795-41980486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 142
               

               
Conread position:
               
31-348
               

               
Cow position:
               
chr24:5397323-5397023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
31-370
               

               
Cow position:
               
chr24:34272679-34273020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
31-371
               

               
Cow position:
               
chr24:2359309-2358984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
149, 77
               

               
Conread position:
               
32-267
               

               
Cow position:
               
chr24:27418230-27418003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
32-306
               

               
Cow position:
               
chr24:24061942-24061666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
37, 162
               

               
Conread position:
               
32-357
               

               
Cow position:
               
chr24:38478515-38478206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
33-370
               

               
Cow position:
               
chr24:20594407-20594749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
64, 221
               

               
Conread position:
               
34-321
               

               
Cow position:
               
chr24:25263869-25263584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
246, 65
               

               
Conread position:
               
34-343
               

               
Cow position:
               
chr24:33372434-33372720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
194, 40
               

               
Conread position:
               
34-376
               

               
Cow position:
               
chr24:11266629-11266975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
35-219
               

               
Cow position:
               
chr24:40837648-40837825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
37-325
               

               
Cow position:
               
chr24:29561701-29561423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
38-278
               

               
Cow position:
               
chr24:35150396-35150631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
236, 67
               

               
Conread position:
               
38-372
               

               
Cow position:
               
chr24:41405769-41406099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 70
               

               
Conread position:
               
38-374
               

               
Cow position:
               
chr24:13626159-13626491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
213, 50
               

               
Conread position:
               
44-338
               

               
Cow position:
               
chr24:43832403-43832691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 97
               

               
Conread position:
               
44-363
               

               
Cow position:
               
chr24:880509-880817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
305, 118
               

               
Conread position:
               
45-366
               

               
Cow position:
               
chr24:37267542-37267862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
46-291
               

               
Cow position:
               
chr24:31309277-31309517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
48-374
               

               
Cow position:
               
chr24:18614883-18615226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
216, 172
               

               
Conread position:
               
50-260
               

               
Cow position:
               
chr24:16895244-16895045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
186, 56
               

               
Conread position:
               
50-343
               

               
Cow position:
               
chr24:37975095-37974809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
178, 30
               

               
Conread position:
               
53-357
               

               
Cow position:
               
chr24:35365810-35365518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
287, 34
               

               
Conread position:
               
53-365
               

               
Cow position:
               
chr24:3656477-3656168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
53-369
               

               
Cow position:
               
chr24:13808674-13808363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
53-371
               

               
Cow position:
               
chr24:15353343-15353649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
54-360
               

               
Cow position:
               
chr24:42862514-42862816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
57-371
               

               
Cow position:
               
chr24:21606778-21606474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 42
               

               
Conread position:
               
59-343
               

               
Cow position:
               
chr24:27958582-27958293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
60-321
               

               
Cow position:
               
chr24:4599609-4599863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
60-343
               

               
Cow position:
               
chr24:28600544-28600264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 203
               

               
Conread position:
               
61-240
               

               
Cow position:
               
chr24:26787748-26787922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
61-325
               

               
Cow position:
               
chr24:28342247-28342518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
61-348
               

               
Cow position:
               
chr24:10031484-10031753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
61-376
               

               
Cow position:
               
chr24:230173-230488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 57
               

               
Conread position:
               
62-259
               

               
Cow position:
               
chr24:34496016-34496217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
64-356
               

               
Cow position:
               
chr24:18755656-18755950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
99, 23
               

               
Conread position:
               
65-365
               

               
Cow position:
               
chr24:22511457-22511757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
186, 41
               

               
Conread position:
               
66-235
               

               
Cow position:
               
chr24:28045653-28045828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
67-369
               

               
Cow position:
               
chr24:39911134-39910832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
68-341
               

               
Cow position:
               
chr24:28042876-28043164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
68-343
               

               
Cow position:
               
chr24:37823432-37823698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
68-365
               

               
Cow position:
               
chr24:9222481-9222187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
69-246
               

               
Cow position:
               
chr24:7046843-7046670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
69-325
               

               
Cow position:
               
chr24:19637489-19637742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
140, 46
               

               
Conread position:
               
70-369
               

               
Cow position:
               
chr24:13948027-13948323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 67
               

               
Conread position:
               
71-343
               

               
Cow position:
               
chr24:20364503-20364242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
157, 16
               

               
Conread position:
               
72-361
               

               
Cow position:
               
chr24:23575249-23574967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
73-358
               

               
Cow position:
               
chr24:19623767-19624053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
178, 26
               

               
Conread position:
               
75-374
               

               
Cow position:
               
chr24:11028776-11028482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
76-277
               

               
Cow position:
               
chr24:40389519-40389718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
76-353
               

               
Cow position:
               
chr24:22156055-22156333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
76-354
               

               
Cow position:
               
chr24:27284732-27285009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
194, 41
               

               
Conread position:
               
76-354
               

               
Cow position:
               
chr24:27349268-27348993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
76-367
               

               
Cow position:
               
chr24:36036143-36035853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
93, 45
               

               
Conread position:
               
76-375
               

               
Cow position:
               
chr24:43028418-43028128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
77-340
               

               
Cow position:
               
chr24:2992965-2992709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
77-359
               

               
Cow position:
               
chr24:29985071-29984797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
81-364
               

               
Cow position:
               
chr24:3464538-3464250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
83-341
               

               
Cow position:
               
chr24:21835043-21834791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
43, 162
               

               
Conread position:
               
83-361
               

               
Cow position:
               
chr24:13587069-13586798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
83-366
               

               
Cow position:
               
chr24:19629425-19629702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
118, 6
               

               
Conread position:
               
83-368
               

               
Cow position:
               
chr24:18810762-18811031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
97-373
               

               
Cow position:
               
chr24:8676755-8677029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
99-374
               

               
Cow position:
               
chr24:7846763-7846490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
244, 7
               

               
Conread position:
               
100-352
               

               
Cow position:
               
chr24:1816231-1816481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 6
               

               
Conread position:
               
100-363
               

               
Cow position:
               
chr24:44104235-44103974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
100-368
               

               
Cow position:
               
chr24:31049551-31049824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
101-352
               

               
Cow position:
               
chr24:28060789-28061043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
103-325
               

               
Cow position:
               
chr24:6742158-6742381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
183, 0
               

               
Conread position:
               
104-373
               

               
Cow position:
               
chr24:44762483-44762213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
106-374
               

               
Cow position:
               
chr24:18884335-18884604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
11, 186
               

               
Conread position:
               
107-274
               

               
Cow position:
               
chr24:20969720-20969557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
107-340
               

               
Cow position:
               
chr24:15288768-15288998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
107-343
               

               
Cow position:
               
chr24:28510738-28510965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
121, 101
               

               
Conread position:
               
107-351
               

               
Cow position:
               
chr24:5360660-5360893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
107-357
               

               
Cow position:
               
chr24:22133112-22133355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
220, 154
               

               
Conread position:
               
110-368
               

               
Cow position:
               
chr24:15584999-15584743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 78
               

               
Conread position:
               
111-341
               

               
Cow position:
               
chr24:22565395-22565164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
112-278
               

               
Cow position:
               
chr24:7390387-7390225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
112-310
               

               
Cow position:
               
chr24:30038817-30039015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
112-325
               

               
Cow position:
               
chr24:41916199-41916413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 153
               

               
Conread position:
               
112-348
               

               
Cow position:
               
chr24:26001333-26001567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
230, 145
               

               
Conread position:
               
112-363
               

               
Cow position:
               
chr24:23694960-23694715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 154
               

               
Conread position:
               
112-367
               

               
Cow position:
               
chr24:37651671-37651919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 122
               

               
Conread position:
               
113-268
               

               
Cow position:
               
chr24:17375585-17375741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
113-343
               

               
Cow position:
               
chr24:23667171-23666951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr24:42175477-42175704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
113-348
               

               
Cow position:
               
chr24:42984338-42984574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
114-357
               

               
Cow position:
               
chr24:19730727-19730970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
114-362
               

               
Cow position:
               
chr24:8392814-8393063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
229, 0
               

               
Conread position:
               
114-372
               

               
Cow position:
               
chr24:18750652-18750918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
115-361
               

               
Cow position:
               
chr24:43220123-43219887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
116-319
               

               
Cow position:
               
chr24:11036885-11036688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
116-370
               

               
Cow position:
               
chr24:24810468-24810726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
88, 234
               

               
Conread position:
               
117-373
               

               
Cow position:
               
chr24:10294439-10294184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
124-342
               

               
Cow position:
               
chr24:42687806-42688014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
124-364
               

               
Cow position:
               
chr24:43155343-43155103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 165
               

               
Conread position:
               
124-372
               

               
Cow position:
               
chr24:36303359-36303114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
114, 169
               

               
Conread position:
               
125-372
               

               
Cow position:
               
chr24:34465547-34465292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 45
               

               
Conread position:
               
125-376
               

               
Cow position:
               
chr24:34915459-34915211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
222, 116
               

               
Conread position:
               
126-336
               

               
Cow position:
               
chr24:25122305-25122504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
127-353
               

               
Cow position:
               
chr24:42226234-42226448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 43
               

               
Conread position:
               
127-361
               

               
Cow position:
               
chr24:13888665-13888896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 38
               

               
Conread position:
               
128-268
               

               
Cow position:
               
chr24:15263837-15263978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 42
               

               
Conread position:
               
128-359
               

               
Cow position:
               
chr24:34079377-34079148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
128-364
               

               
Cow position:
               
chr24:17309175-17308947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
129-352
               

               
Cow position:
               
chr24:19966113-19965893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
129-376
               

               
Cow position:
               
chr24:35310684-35310934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
130-339
               

               
Cow position:
               
chr24:29539965-29539760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
130-343
               

               
Cow position:
               
chr24:27810123-27810323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
131-360
               

               
Cow position:
               
chr24:42903774-42904002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
131-370
               

               
Cow position:
               
chr24:22567068-22567307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
132-373
               

               
Cow position:
               
chr24:12120862-12121103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-325
               

               
Cow position:
               
chr24:32230541-32230348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 151
               

               
Conread position:
               
133-353
               

               
Cow position:
               
chr24:7757739-7757954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
208, 137
               

               
Conread position:
               
133-364
               

               
Cow position:
               
chr24:27448611-27448841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 109
               

               
Conread position:
               
136-350
               

               
Cow position:
               
chr24:27066200-27066413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
206, 69
               

               
Conread position:
               
141-368
               

               
Cow position:
               
chr24:18302689-18302917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
143-361
               

               
Cow position:
               
chr24:3412660-3412873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
144-357
               

               
Cow position:
               
chr24:31383098-31383296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
145-325
               

               
Cow position:
               
chr24:5632442-5632260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
145-340
               

               
Cow position:
               
chr24:5152502-5152697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
145-343
               

               
Cow position:
               
chr24:34302057-34301863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
145-348
               

               
Cow position:
               
chr24:21524043-21524244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
145-352
               

               
Cow position:
               
chr24:33238286-33238071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
145-353
               

               
Cow position:
               
chr24:11836425-11836216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
145-360
               

               
Cow position:
               
chr24:2261646-2261860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
200, 0
               

               
Conread position:
               
145-366
               

               
Cow position:
               
chr24:8603009-8602791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
145-372
               

               
Cow position:
               
chr24:24902858-24903087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
197, 104
               

               
Conread position:
               
145-375
               

               
Cow position:
               
chr24:17689632-17689405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
115, 90
               

               
Conread position:
               
146-286
               

               
Cow position:
               
chr24:5143979-5143836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
146-343
               

               
Cow position:
               
chr24:32891064-32890872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
184, 115
               

               
Conread position:
               
146-357
               

               
Cow position:
               
chr24:161983-162194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
191, 201
               

               
Conread position:
               
147-323
               

               
Cow position:
               
chr24:42194759-42194591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
147-342
               

               
Cow position:
               
chr24:13610292-13610474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
147-364
               

               
Cow position:
               
chr24:20323521-20323304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
111, 199
               

               
Conread position:
               
147-366
               

               
Cow position:
               
chr24:40055530-40055315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
147-372
               

               
Cow position:
               
chr24:36775796-36775569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
147-376
               

               
Cow position:
               
chr24:29677935-29677702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
148-376
               

               
Cow position:
               
chr24:34595747-34595518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
150-343
               

               
Cow position:
               
chr24:27553079-27553274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
150-353
               

               
Cow position:
               
chr24:9300612-9300814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
150-367
               

               
Cow position:
               
chr24:19598889-19599111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
150-369
               

               
Cow position:
               
chr24:18730328-18730547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
151-263
               

               
Cow position:
               
chr24:41412311-41412200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
151-352
               

               
Cow position:
               
chr24:21715366-21715167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
151-375
               

               
Cow position:
               
chr24:28775573-28775349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
192, 109
               

               
Conread position:
               
152-353
               

               
Cow position:
               
chr24:18695865-18696067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
152-368
               

               
Cow position:
               
chr24:44776191-44775975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
119, 111
               

               
Conread position:
               
154-373
               

               
Cow position:
               
chr24:26695960-26695741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
157-370
               

               
Cow position:
               
chr24:24165532-24165746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
161-367
               

               
Cow position:
               
chr24:26808586-26808788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 109
               

               
Conread position:
               
163-343
               

               
Cow position:
               
chr24:27719527-27719356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
165-343
               

               
Cow position:
               
chr24:21887459-21887277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 7
               

               
Conread position:
               
166-319
               

               
Cow position:
               
chr24:11736071-11735920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr24:358366-358561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 25
               

               
Conread position:
               
167-358
               

               
Cow position:
               
chr24:11692504-11692696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
172, 71
               

               
Conread position:
               
167-359
               

               
Cow position:
               
chr24:40025376-40025190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
167-365
               

               
Cow position:
               
chr24:6913689-6913491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
167-366
               

               
Cow position:
               
chr24:39760025-39760224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
167-368
               

               
Cow position:
               
chr24:22419961-22420161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
175-367
               

               
Cow position:
               
chr24:39488353-39488545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 168
               

               
Conread position:
               
176-364
               

               
Cow position:
               
chr24:44896048-44896236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
176-376
               

               
Cow position:
               
chr24:18405271-18405073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 103
               

               
Conread position:
               
177-295
               

               
Cow position:
               
chr24:21623233-21623354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
177-325
               

               
Cow position:
               
chr24:27270937-27271085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
177-341
               

               
Cow position:
               
chr24:15557331-15557172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
177-343
               

               
Cow position:
               
chr24:34772302-34772128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
177-353
               

               
Cow position:
               
chr24:24532184-24532356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
177-354
               

               
Cow position:
               
chr24:37252168-37252343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
177-358
               

               
Cow position:
               
chr24:22221388-22221568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
177-367
               

               
Cow position:
               
chr24:26588231-26588415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
177-368
               

               
Cow position:
               
chr24:24091329-24091136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
91, 171
               

               
Conread position:
               
177-370
               

               
Cow position:
               
chr24:22129627-22129438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
177-373
               

               
Cow position:
               
chr24:43499669-43499860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
177-374
               

               
Cow position:
               
chr24:21656417-21656613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
178-321
               

               
Cow position:
               
chr24:36010432-36010578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
178-343
               

               
Cow position:
               
chr24:6887020-6887180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
178-343
               

               
Cow position:
               
chr24:25947850-25947685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
178-353
               

               
Cow position:
               
chr24:6008158-6007988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
178-362
               

               
Cow position:
               
chr24:250526-250342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
178-364
               

               
Cow position:
               
chr24:28256047-28255869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
178-365
               

               
Cow position:
               
chr24:39903992-39903812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
178-370
               

               
Cow position:
               
chr24:14373570-14373374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
91, 73
               

               
Conread position:
               
178-372
               

               
Cow position:
               
chr24:885430-885242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
178-375
               

               
Cow position:
               
chr24:31781882-31782084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
179-369
               

               
Cow position:
               
chr24:11035493-11035313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
179-370
               

               
Cow position:
               
chr24:36286582-36286768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
180-335
               

               
Cow position:
               
chr24:18401306-18401151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
180-348
               

               
Cow position:
               
chr24:27413097-27412936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
180-368
               

               
Cow position:
               
chr24:35335105-35335281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
183-339
               

               
Cow position:
               
chr24:24540474-24540322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
127, 77
               

               
Conread position:
               
183-348
               

               
Cow position:
               
chr24:18874804-18874641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
183-364
               

               
Cow position:
               
chr24:28787870-28788053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
111, 92
               

               
Conread position:
               
183-364
               

               
Cow position:
               
chr24:36554681-36554506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
184-341
               

               
Cow position:
               
chr24:16303659-16303512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
184-375
               

               
Cow position:
               
chr24:40811695-40811874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
185-352
               

               
Cow position:
               
chr24:38428094-38427925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
186-324
               

               
Cow position:
               
chr24:29648248-29648107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
186-338
               

               
Cow position:
               
chr24:11155646-11155494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-343
               

               
Cow position:
               
chr24:3148216-3148060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
44, 99
               

               
Conread position:
               
186-347
               

               
Cow position:
               
chr24:33569318-33569157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
186-354
               

               
Cow position:
               
chr24:23046878-23046710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
186-355
               

               
Cow position:
               
chr24:43445994-43445825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
186-357
               

               
Cow position:
               
chr24:16640930-16641104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
186-365
               

               
Cow position:
               
chr24:20017408-20017226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
186-366
               

               
Cow position:
               
chr24:26569477-26569656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
186-367
               

               
Cow position:
               
chr24:28774905-28774725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
186-375
               

               
Cow position:
               
chr24:10437842-10438025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
186-376
               

               
Cow position:
               
chr24:18541430-18541249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
162, 40
               

               
Conread position:
               
187-362
               

               
Cow position:
               
chr24:25142630-25142810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
187-365
               

               
Cow position:
               
chr24:4635147-4634967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
188-373
               

               
Cow position:
               
chr24:3193251-3193068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
189-375
               

               
Cow position:
               
chr24:415589-415777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
190-329
               

               
Cow position:
               
chr24:20791851-20791712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 62
               

               
Conread position:
               
190-340
               

               
Cow position:
               
chr24:22641113-22641263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
190-341
               

               
Cow position:
               
chr24:38693855-38693705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
190-357
               

               
Cow position:
               
chr24:11921887-11921717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
190-362
               

               
Cow position:
               
chr24:17178627-17178804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
190-368
               

               
Cow position:
               
chr24:24692845-24693019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
190-369
               

               
Cow position:
               
chr24:18021248-18021069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-370
               

               
Cow position:
               
chr24:18702424-18702599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
193-323
               

               
Cow position:
               
chr24:15473554-15473683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
193-371
               

               
Cow position:
               
chr24:6488235-6488407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
150, 76
               

               
Conread position:
               
194-325
               

               
Cow position:
               
chr24:42008045-42008175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
71, 82
               

               
Conread position:
               
194-343
               

               
Cow position:
               
chr24:40578206-40578351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
196-319
               

               
Cow position:
               
chr24:43027197-43027071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
196-325
               

               
Cow position:
               
chr24:18817416-18817545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
200-320
               

               
Cow position:
               
chr24:124593-124713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
202-368
               

               
Cow position:
               
chr24:12241754-12241920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
206-354
               

               
Cow position:
               
chr24:22155367-22155515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
211-367
               

               
Cow position:
               
chr24:35210099-35210257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
214-376
               

               
Cow position:
               
chr24:18754479-18754641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 132
               
Show alignments to all cow chromosomes.