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Cow genome map

           
Conread name:
           
rcmu37_n4.y1
        

               
Conread position:
               
1-125
               

               
Cow position:
               
chr13:20597600-20597716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr13:57323635-57323508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
44, 59
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr13:33054212-33054349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 124
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr13:19555931-19555797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr13:38485010-38484870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
85, 29
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr13:56431726-56431861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr13:20536679-20536526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr13:21210041-21209883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr13:15740248-15740077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr13:21904841-21904669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr13:37516957-37517129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr13:46458801-46458630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
103, 81
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr13:60690543-60690718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr13:54331198-54331026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr13:34556154-34556333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr13:54381755-54381935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:56842714-56842883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr13:5713473-5713300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr13:38012540-38012346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr13:15172228-15172422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr13:54237525-54237338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr13:9884947-9884749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr13:6975611-6975816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr13:51108670-51108467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:3003626-3003401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:20041782-20041998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
34, 142
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:25261629-25261840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr13:34052422-34052618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 98
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr13:6759610-6759829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 174
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr13:62474620-62474833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:26098324-26098125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:33517745-33517960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr13:5752244-5752464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
31, 163
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr13:18215605-18215408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:61170536-61170757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 160
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr13:5091482-5091723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 198
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr13:56605291-56605544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 105
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr13:21155310-21155569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 159
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr13:24376669-24376421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 42
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr13:41253796-41253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
232, 29
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr13:37795613-37795383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
230, 25
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:17815950-17815709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
44, 164
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:21039419-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 163
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr13:33631299-33631053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr13:60329929-60329680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
106, 49
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:40652112-40651853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr13:13306281-13306014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 166
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr13:60340993-60340724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 148
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr13:31808691-31808438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr13:53536126-53536392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:61166279-61166536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:4464186-4463924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:12045154-12045426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
15, 121
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:34941477-34941738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:44626559-44626280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:52284088-52283824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr13:20605940-20606207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 99
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr13:25062589-25062322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:16292725-16292449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 140
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:17338613-17338337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:30651354-30651096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr13:11954934-11955210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
130, 31
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:17855553-17855274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:46324611-46324886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr13:47756553-47756263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
49, 159
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr13:18244035-18243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr13:26383052-26383336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr13:52227921-52228201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 41
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:966256-965998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
42, 100
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:25531609-25531892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 220
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr13:29631037-29630754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:20649804-20650094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr13:31814046-31813763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 26
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr13:6153600-6153899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 169
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr13:15884834-15885138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 174
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr13:17622463-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr13:13465611-13465883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr13:15167002-15166701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 218
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr13:12614439-12614135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 156
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr13:8652259-8652561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr13:15528849-15529156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 165
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr13:11061163-11060867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr13:14771640-14771332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 287
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr13:28683538-28683242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
232, 59
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr13:37484091-37484399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 133
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr13:46311856-46312133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr13:51821713-51821993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr13:13501440-13501739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr13:43194354-43194047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
211, 121
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:890000-890297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 28
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr13:9593686-9593381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr13:20563176-20562868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 156
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr13:46181968-46181666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr13:9643703-9644018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 127
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr13:54344955-54344655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 166
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr13:38872793-38873075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr13:6086721-6087024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 92
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr13:18172519-18172204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr13:26369705-26369392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 160
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr13:48037799-48037491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:547667-547362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:3315495-3315808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:7076435-7076124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:11096351-11096049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:17439587-17439901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:21283527-21283837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 107
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:23856395-23856078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 170
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:36771246-36771553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:53566778-53566468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 165
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:56148720-56148388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 183
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:56160247-56160579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 183
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:8524443-8524757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 23
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:23166917-23167239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 307
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:23270034-23270345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr13:17800251-17799939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 101
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr13:60974257-60973936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr13:52585841-52586187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr13:8838815-8839160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
230, 119
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr13:18989884-18989561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
226, 64
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr13:25547414-25547761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
232, 30
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr13:23479208-23478849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr13:24155720-24155311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr13:37521553-37521949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
65, 153
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr13:48165250-48165624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 33
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chr13:12207222-12206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
232, 154
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr13:26847645-26848035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:59687700-59688069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr13:19393466-19393087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 40
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr13:25926971-25926579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 132
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr13:34995147-34995521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr13:37804058-37803670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 6
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr13:48598083-48597700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr13:59170836-59170435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr13:60966943-60966569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr13:15257199-15257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr13:311609-311220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 183
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr13:19033725-19033342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr13:22115883-22115462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr13:26261615-26262005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr13:54094985-54094614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr13:57002910-57002509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 163
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr13:20784767-20784380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 110
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr13:14544301-14543919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 170
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr13:20839746-20839364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 163
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr13:42200798-42200404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr13:46516251-46515843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 173
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr13:1155529-1155924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
230, 98
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr13:15991043-15991447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 169
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr13:17158692-17159099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 164
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr13:19610397-19610783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr13:24715421-24715032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr13:25817692-25817312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 30
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr13:35526038-35526411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 30
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr13:35659932-35659537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr13:43139046-43139418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr13:8245153-8245532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr13:15621987-15621591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
171, 13
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr13:15195030-15195422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr13:36877251-36876844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 302
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr13:61976784-61977179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 162
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr13:20466113-20466490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr13:48251813-48252191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr13:24369763-24369364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr13:52199268-52198881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr13:17977508-17977119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
263, 32
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr13:21235506-21235892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr13:15958800-15958397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr13:5263107-5263503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 108
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr13:6616569-6616992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 94
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr13:9906922-9906502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
42, 169
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr13:9974889-9975293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 162
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr13:15041293-15041702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 162
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr13:55583378-55582967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr13:55674026-55674434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 154
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr13:6540134-6540528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 18
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr13:20271036-20271460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr13:20497831-20497414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr13:25695589-25695995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 146
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr13:11767863-11768256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
103, 112
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr13:18491774-18491377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr13:23512538-23512150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr13:52749308-52749694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr13:13089203-13088806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr13:33256675-33256267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 86
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr13:15288746-15289149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr13:20880748-20881154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 23
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr13:37592759-37593177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 166
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr13:15446225-15445816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr13:32017343-32017751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
42, 166
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr13:5279010-5279437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr13:19188483-19188082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 171
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr13:6189451-6189834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 30
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr13:7059654-7059221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr13:10845772-10845385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 91
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr13:17745418-17745022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 112
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr13:1231830-1231406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr13:9587404-9587814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
30, 139
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr13:17114200-17114616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 69
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr13:40722530-40722919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr13:5758166-5758568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 49
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr13:9846275-9846701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr13:12283017-12282596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
41, 284
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr13:12990025-12989627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 144
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr13:17970855-17971277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 30
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr13:19178455-19178040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 169
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr13:32283306-32282887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr13:38329809-38329380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 324
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr13:40491412-40490978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 161
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr13:46112146-46111730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 47
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr13:20879655-20880066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr13:21276034-21275618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 102
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr13:21287911-21288323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 49
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr13:51940910-51940488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 33
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr13:57475237-57475657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 142
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr13:45353225-45352784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr13:39232660-39233073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr13:52894323-52893905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr13:33875841-33875429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
232, 42
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr13:34728658-34729083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 104
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr13:42860391-42860811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:19223828-19223407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 157
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:37981573-37981981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:45073756-45074146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 21
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:47186403-47185986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 152
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:12448809-12449227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 167
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:20509911-20509482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:24754063-24753651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 133
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:38283805-38284216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
2-126
               

               
Cow position:
               
chr13:14927417-14927289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr13:22025531-22025675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-156
               

               
Cow position:
               
chr13:6606843-6606999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr13:46636953-46637121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
163, 80
               

               
Conread position:
               
2-188
               

               
Cow position:
               
chr13:18551626-18551435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 168
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr13:2339608-2339429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr13:49283164-49283361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr13:16155539-16155726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr13:21189459-21189260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr13:562960-563164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 164
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr13:9548869-9548665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
143, 78
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr13:24060172-24060364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr13:54093918-54093716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr13:12682363-12682582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr13:30026290-30026067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
83, 44
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr13:37521202-37521433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
229, 159
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr13:30693879-30693655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr13:55295447-55295698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 43
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr13:12618931-12619188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 162
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr13:61188713-61188441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr13:53195114-53195379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
2-286
               

               
Cow position:
               
chr13:36352792-36353061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr13:60429900-60430198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr13:40943426-40943123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr13:5082832-5082529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr13:10928812-10929110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr13:18835364-18835082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr13:47356805-47356530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr13:1042778-1043099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr13:56154983-56155277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr13:37381988-37381670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 174
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr13:12546727-12547040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 158
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr13:20706024-20706338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr13:43184695-43185013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 65
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr13:20683943-20684264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 160
               

               
Conread position:
               
2-321
               

               
Cow position:
               
chr13:57494005-57494327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 147
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr13:12202543-12202223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 55
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr13:20231022-20231331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
2-358
               

               
Cow position:
               
chr13:20666208-20666565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 65
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr13:34263195-34263556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 29
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr13:15974788-15974414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr13:6974338-6973953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr13:13320958-13320588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 20
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr13:19022456-19022055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
2-385
               

               
Cow position:
               
chr13:24586224-24585839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
2-386
               

               
Cow position:
               
chr13:27525083-27525469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 158
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr13:2192886-2192524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr13:2774302-2773902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 16
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr13:15192716-15193102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 32
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr13:19882857-19883247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 29
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr13:20820662-20821050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 39
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr13:23960631-23961023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 162
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr13:52057717-52057343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 24
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr13:41806958-41806559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 363
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr13:52055418-52055810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr13:20863839-20864200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 39
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr13:49503350-49503759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr13:46525264-46525649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr13:15869297-15868883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr13:51528268-51528663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr13:44323080-44322663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 122
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr13:45023030-45023448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr13:37069527-37069112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 140
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr13:49022692-49023097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr13:21241914-21242305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr13:51015002-51015419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr13:14063346-14063754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 41
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr13:54702369-54701947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr13:6079241-6079641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 153
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr13:12925969-12925554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 137
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr13:17291952-17292376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr13:13261186-13260746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 171
               

               
Conread position:
               
3-167
               

               
Cow position:
               
chr13:5079047-5079212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
149, 131
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr13:43839370-43839561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr13:1780010-1779781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
75, 162
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr13:61047384-61047123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr13:52879589-52879300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr13:39952235-39952522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
29, 143
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr13:61990157-61990440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr13:20679522-20679217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr13:2404920-2404625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
28, 149
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr13:15110501-15110189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:2414203-2413904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
3-309
               

               
Cow position:
               
chr13:43919080-43919388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 54
               

               
Conread position:
               
3-313
               

               
Cow position:
               
chr13:43868943-43869243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr13:11460802-11460497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
3-385
               

               
Cow position:
               
chr13:44202166-44201800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
228, 40
               

               
Conread position:
               
3-387
               

               
Cow position:
               
chr13:47007559-47007924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 28
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr13:22085574-22085945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 47
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr13:23667436-23667040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
3-401
               

               
Cow position:
               
chr13:10988893-10989299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 164
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr13:4664685-4665075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
3-404
               

               
Cow position:
               
chr13:34281857-34281453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 156
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr13:26480037-26480432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 21
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr13:20378160-20378547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
29, 54
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr13:43480238-43479821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr13:56686604-56686201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 17
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr13:34375446-34375015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
4-148
               

               
Cow position:
               
chr13:60393523-60393669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
4-152
               

               
Cow position:
               
chr13:11147482-11147329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr13:19426522-19426702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr13:43812258-43812068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr13:36346147-36345924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
108, 158
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr13:2463053-2463301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr13:17613522-17613252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 152
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr13:607085-607350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
40, 164
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr13:6060831-6061127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr13:55316013-55316329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 163
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr13:21176148-21176497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 37
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr13:18166906-18166519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 45
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr13:34261408-34261022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr13:53574145-53573759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 41
               

               
Conread position:
               
4-402
               

               
Cow position:
               
chr13:8362570-8362971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr13:43594939-43595337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 45
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr13:49805151-49804756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
33, 155
               

               
Conread position:
               
4-411
               

               
Cow position:
               
chr13:49507669-49508066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 169
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr13:13339040-13338618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
41, 170
               

               
Conread position:
               
4-415
               

               
Cow position:
               
chr13:20088523-20088959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 203
               

               
Conread position:
               
4-415
               

               
Cow position:
               
chr13:42114197-42113771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chr13:24230388-24229965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 159
               

               
Conread position:
               
5-153
               

               
Cow position:
               
chr13:39948244-39948390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr13:2302662-2302836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 162
               

               
Conread position:
               
5-214
               

               
Cow position:
               
chr13:3701610-3701408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr13:8201311-8201594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 77
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr13:43762340-43762023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 29
               

               
Conread position:
               
5-383
               

               
Cow position:
               
chr13:971723-972104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 36
               

               
Conread position:
               
5-393
               

               
Cow position:
               
chr13:1959184-1958807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
5-393
               

               
Cow position:
               
chr13:18852251-18851871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 38
               

               
Conread position:
               
5-397
               

               
Cow position:
               
chr13:12670269-12670673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 101
               

               
Conread position:
               
5-403
               

               
Cow position:
               
chr13:34761845-34761473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
161, 29
               

               
Conread position:
               
5-414
               

               
Cow position:
               
chr13:60508944-60509360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 115
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr13:10924729-10925173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
6-169
               

               
Cow position:
               
chr13:24776453-24776292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
145, 84
               

               
Conread position:
               
6-393
               

               
Cow position:
               
chr13:4552977-4552609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
6-405
               

               
Cow position:
               
chr13:19364418-19364018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 102
               

               
Conread position:
               
6-412
               

               
Cow position:
               
chr13:47964025-47964412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 37
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr13:152125-151729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 28
               

               
Conread position:
               
7-304
               

               
Cow position:
               
chr13:32826285-32826598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
8-255
               

               
Cow position:
               
chr13:29814717-29814466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
8-401
               

               
Cow position:
               
chr13:20473515-20473900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 83
               

               
Conread position:
               
9-246
               

               
Cow position:
               
chr13:16024763-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
9-302
               

               
Cow position:
               
chr13:8609380-8609667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr13:7790184-7789972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
153, 75
               

               
Conread position:
               
10-246
               

               
Cow position:
               
chr13:4420517-4420278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
68, 161
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr13:52922261-52922031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
10-261
               

               
Cow position:
               
chr13:17346977-17346731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
10-406
               

               
Cow position:
               
chr13:17021555-17021955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 158
               

               
Conread position:
               
11-144
               

               
Cow position:
               
chr13:58743120-58743253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
11-181
               

               
Cow position:
               
chr13:55843652-55843479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 155
               

               
Conread position:
               
11-261
               

               
Cow position:
               
chr13:46430132-46430384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
78, 221
               

               
Conread position:
               
11-315
               

               
Cow position:
               
chr13:15281764-15282067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
29, 162
               

               
Conread position:
               
11-389
               

               
Cow position:
               
chr13:29831265-29831640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 16
               

               
Conread position:
               
11-401
               

               
Cow position:
               
chr13:37818584-37818971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
12-165
               

               
Cow position:
               
chr13:22030256-22030104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
71, 38
               

               
Conread position:
               
12-402
               

               
Cow position:
               
chr13:20157896-20157502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 27
               

               
Conread position:
               
12-411
               

               
Cow position:
               
chr13:867296-866898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 177
               

               
Conread position:
               
14-195
               

               
Cow position:
               
chr13:18942051-18941864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
18, 65
               

               
Conread position:
               
14-274
               

               
Cow position:
               
chr13:13954222-13954485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
64, 143
               

               
Conread position:
               
14-308
               

               
Cow position:
               
chr13:32167139-32167436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
81, 185
               

               
Conread position:
               
14-313
               

               
Cow position:
               
chr13:13176820-13176520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr13:28689636-28689232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
15-230
               

               
Cow position:
               
chr13:28652963-28652756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
15-302
               

               
Cow position:
               
chr13:15903182-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
15-308
               

               
Cow position:
               
chr13:33282175-33281880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 157
               

               
Conread position:
               
15-313
               

               
Cow position:
               
chr13:45726057-45725760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
15-314
               

               
Cow position:
               
chr13:9265668-9265958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
15-415
               

               
Cow position:
               
chr13:38698216-38697818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
16-315
               

               
Cow position:
               
chr13:39368117-39367826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
16-417
               

               
Cow position:
               
chr13:17498395-17497977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 154
               

               
Conread position:
               
18-309
               

               
Cow position:
               
chr13:52284971-52284689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
70, 96
               

               
Conread position:
               
19-380
               

               
Cow position:
               
chr13:6441938-6442311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 144
               

               
Conread position:
               
19-407
               

               
Cow position:
               
chr13:54583042-54582643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 237
               

               
Conread position:
               
21-219
               

               
Cow position:
               
chr13:16833913-16834111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 158
               

               
Conread position:
               
21-403
               

               
Cow position:
               
chr13:16247819-16247419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 150
               

               
Conread position:
               
22-393
               

               
Cow position:
               
chr13:9900307-9899927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
22-406
               

               
Cow position:
               
chr13:25496168-25495780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
22-407
               

               
Cow position:
               
chr13:19581929-19582313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
295, 129
               

               
Conread position:
               
23-211
               

               
Cow position:
               
chr13:51199476-51199292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr13:20853722-20853915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
24-215
               

               
Cow position:
               
chr13:13265963-13265774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
24-300
               

               
Cow position:
               
chr13:7663268-7663540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 106
               

               
Conread position:
               
24-304
               

               
Cow position:
               
chr13:16343840-16343572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
206, 42
               

               
Conread position:
               
24-402
               

               
Cow position:
               
chr13:4208662-4209031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
263, 60
               

               
Conread position:
               
25-215
               

               
Cow position:
               
chr13:41154877-41155066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
27-237
               

               
Cow position:
               
chr13:20440438-20440636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
204, 14
               

               
Conread position:
               
27-308
               

               
Cow position:
               
chr13:11820740-11820473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
198, 16
               

               
Conread position:
               
27-401
               

               
Cow position:
               
chr13:21107291-21106920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 97
               

               
Conread position:
               
27-404
               

               
Cow position:
               
chr13:25537785-25537409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
51, 148
               

               
Conread position:
               
27-410
               

               
Cow position:
               
chr13:26366034-26365631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
187, 88
               

               
Conread position:
               
27-411
               

               
Cow position:
               
chr13:45594056-45593685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 26
               

               
Conread position:
               
27-415
               

               
Cow position:
               
chr13:17568946-17569333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 147
               

               
Conread position:
               
27-421
               

               
Cow position:
               
chr13:18999695-18999281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
28-307
               

               
Cow position:
               
chr13:46736365-46736090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
32, 128
               

               
Conread position:
               
28-420
               

               
Cow position:
               
chr13:32535811-32535440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 142
               

               
Conread position:
               
29-398
               

               
Cow position:
               
chr13:26743278-26742903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
31-248
               

               
Cow position:
               
chr13:20128814-20128600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
73, 134
               

               
Conread position:
               
31-402
               

               
Cow position:
               
chr13:20174899-20174513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 73
               

               
Conread position:
               
31-410
               

               
Cow position:
               
chr13:58525083-58524709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
31-411
               

               
Cow position:
               
chr13:5671443-5671822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 43
               

               
Conread position:
               
32-399
               

               
Cow position:
               
chr13:28552745-28552359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
6, 140
               

               
Conread position:
               
32-415
               

               
Cow position:
               
chr13:37946804-37947182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
6, 31
               

               
Conread position:
               
33-421
               

               
Cow position:
               
chr13:25434971-25435352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
8, 232
               

               
Conread position:
               
34-219
               

               
Cow position:
               
chr13:16711776-16711591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 137
               

               
Conread position:
               
34-233
               

               
Cow position:
               
chr13:29958824-29958636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
34-274
               

               
Cow position:
               
chr13:1363838-1363602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
34-290
               

               
Cow position:
               
chr13:62601151-62600899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
199, 55
               

               
Conread position:
               
34-308
               

               
Cow position:
               
chr13:20180563-20180290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
34-314
               

               
Cow position:
               
chr13:18696988-18696709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 47
               

               
Conread position:
               
34-337
               

               
Cow position:
               
chr13:50739312-50739015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
34-393
               

               
Cow position:
               
chr13:8374626-8374978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 133
               

               
Conread position:
               
34-402
               

               
Cow position:
               
chr13:28139712-28139354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 47
               

               
Conread position:
               
34-406
               

               
Cow position:
               
chr13:26698351-26698725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 146
               

               
Conread position:
               
34-406
               

               
Cow position:
               
chr13:54388875-54389247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 36
               

               
Conread position:
               
35-204
               

               
Cow position:
               
chr13:25249009-25249179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
35-404
               

               
Cow position:
               
chr13:20360415-20360046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
198, 63
               

               
Conread position:
               
37-397
               

               
Cow position:
               
chr13:11821293-11820939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
39-233
               

               
Cow position:
               
chr13:47313060-47312867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
114, 76
               

               
Conread position:
               
39-236
               

               
Cow position:
               
chr13:14870670-14870478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
39-277
               

               
Cow position:
               
chr13:52929850-52929616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
39-304
               

               
Cow position:
               
chr13:11381581-11381845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 91
               

               
Conread position:
               
39-304
               

               
Cow position:
               
chr13:17966068-17966331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 122
               

               
Conread position:
               
39-308
               

               
Cow position:
               
chr13:8555604-8555339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 127
               

               
Conread position:
               
39-308
               

               
Cow position:
               
chr13:49520681-49520948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
167, 128
               

               
Conread position:
               
39-321
               

               
Cow position:
               
chr13:48375504-48375769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
193, 109
               

               
Conread position:
               
39-405
               

               
Cow position:
               
chr13:18058108-18058477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
39-409
               

               
Cow position:
               
chr13:12875831-12876211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 77
               

               
Conread position:
               
40-250
               

               
Cow position:
               
chr13:6455508-6455307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
40-274
               

               
Cow position:
               
chr13:13238717-13238485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
40-274
               

               
Cow position:
               
chr13:21269440-21269674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
43, 115
               

               
Conread position:
               
40-300
               

               
Cow position:
               
chr13:37640726-37640471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
41-303
               

               
Cow position:
               
chr13:51115889-51116145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 74
               

               
Conread position:
               
41-402
               

               
Cow position:
               
chr13:3160530-3160175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
273, 61
               

               
Conread position:
               
41-406
               

               
Cow position:
               
chr13:11321477-11321830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
162, 120
               

               
Conread position:
               
41-413
               

               
Cow position:
               
chr13:11808697-11808351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 69
               

               
Conread position:
               
42-251
               

               
Cow position:
               
chr13:10098853-10099056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
188, 102
               

               
Conread position:
               
43-386
               

               
Cow position:
               
chr13:20288466-20288128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 13
               

               
Conread position:
               
43-400
               

               
Cow position:
               
chr13:6663614-6663981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
44-404
               

               
Cow position:
               
chr13:2803604-2803256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
46-308
               

               
Cow position:
               
chr13:12745805-12745547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
189, 51
               

               
Conread position:
               
46-397
               

               
Cow position:
               
chr13:17821134-17821479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 116
               

               
Conread position:
               
46-409
               

               
Cow position:
               
chr13:6849064-6848689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
48-277
               

               
Cow position:
               
chr13:62617955-62617727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
49-225
               

               
Cow position:
               
chr13:10013625-10013451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
49-310
               

               
Cow position:
               
chr13:62518201-62518458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
184, 32
               

               
Conread position:
               
49-404
               

               
Cow position:
               
chr13:58763501-58763838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 63
               

               
Conread position:
               
50-314
               

               
Cow position:
               
chr13:6389510-6389264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 112
               

               
Conread position:
               
50-377
               

               
Cow position:
               
chr13:18929661-18929324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
50-383
               

               
Cow position:
               
chr13:11260399-11260070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
50-413
               

               
Cow position:
               
chr13:25381092-25380708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
50-413
               

               
Cow position:
               
chr13:44003852-44003464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
51-317
               

               
Cow position:
               
chr13:11591875-11591616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 72
               

               
Conread position:
               
51-408
               

               
Cow position:
               
chr13:49205105-49204783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
255, 63
               

               
Conread position:
               
51-419
               

               
Cow position:
               
chr13:21280358-21280744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
174, 109
               

               
Conread position:
               
52-164
               

               
Cow position:
               
chr13:48372788-48372898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
52-305
               

               
Cow position:
               
chr13:15144244-15144488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr13:20217260-20217601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
53-404
               

               
Cow position:
               
chr13:14576334-14575983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
53-418
               

               
Cow position:
               
chr13:18995256-18994886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
54-389
               

               
Cow position:
               
chr13:15945604-15945280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
55-250
               

               
Cow position:
               
chr13:626685-626489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
55-397
               

               
Cow position:
               
chr13:17437743-17438083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
57-270
               

               
Cow position:
               
chr13:50713325-50713122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
57-385
               

               
Cow position:
               
chr13:1569046-1568725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 143
               

               
Conread position:
               
57-394
               

               
Cow position:
               
chr13:60375365-60375706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 98
               

               
Conread position:
               
57-407
               

               
Cow position:
               
chr13:5910773-5911124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
59-292
               

               
Cow position:
               
chr13:34555711-34555938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
109, 65
               

               
Conread position:
               
61-402
               

               
Cow position:
               
chr13:20535001-20534674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 68
               

               
Conread position:
               
61-408
               

               
Cow position:
               
chr13:15194613-15194951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 105
               

               
Conread position:
               
61-411
               

               
Cow position:
               
chr13:19279209-19278862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 7
               

               
Conread position:
               
62-394
               

               
Cow position:
               
chr13:5060863-5060520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
62-416
               

               
Cow position:
               
chr13:27550857-27550492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
62-418
               

               
Cow position:
               
chr13:21135782-21136156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 99
               

               
Conread position:
               
64-314
               

               
Cow position:
               
chr13:56678131-56677883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
66-304
               

               
Cow position:
               
chr13:8402169-8401934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
66-410
               

               
Cow position:
               
chr13:20357779-20358121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
68-389
               

               
Cow position:
               
chr13:14967103-14967428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
72-325
               

               
Cow position:
               
chr13:13297782-13297523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
159, 34
               

               
Conread position:
               
72-325
               

               
Cow position:
               
chr13:19320643-19320390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 83
               

               
Conread position:
               
72-377
               

               
Cow position:
               
chr13:8667721-8667414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
72-406
               

               
Cow position:
               
chr13:19240544-19240209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
73-308
               

               
Cow position:
               
chr13:55728006-55727776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
73-413
               

               
Cow position:
               
chr13:20155107-20154756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
74-307
               

               
Cow position:
               
chr13:3989308-3989067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 8
               

               
Conread position:
               
75-300
               

               
Cow position:
               
chr13:8355302-8355087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
156, 30
               

               
Conread position:
               
75-414
               

               
Cow position:
               
chr13:7265020-7265342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 56
               

               
Conread position:
               
76-305
               

               
Cow position:
               
chr13:37527864-37528076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
76-389
               

               
Cow position:
               
chr13:49457777-49457489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
157, 66
               

               
Conread position:
               
76-400
               

               
Cow position:
               
chr13:15659378-15659051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
157, 8
               

               
Conread position:
               
77-307
               

               
Cow position:
               
chr13:47022462-47022240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
157, 51
               

               
Conread position:
               
77-377
               

               
Cow position:
               
chr13:49476188-49475870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
77-385
               

               
Cow position:
               
chr13:46329501-46329812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 85
               

               
Conread position:
               
77-387
               

               
Cow position:
               
chr13:24693054-24692747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
121, 65
               

               
Conread position:
               
77-399
               

               
Cow position:
               
chr13:16038191-16038508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
156, 6
               

               
Conread position:
               
77-402
               

               
Cow position:
               
chr13:4158766-4158430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
77-407
               

               
Cow position:
               
chr13:620158-620475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
192, 47
               

               
Conread position:
               
77-420
               

               
Cow position:
               
chr13:54128491-54128842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
55, 6
               

               
Conread position:
               
79-394
               

               
Cow position:
               
chr13:16714161-16714484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
81-414
               

               
Cow position:
               
chr13:17822855-17823191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 22
               

               
Conread position:
               
85-325
               

               
Cow position:
               
chr13:23526204-23525970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
188, 36
               

               
Conread position:
               
86-227
               

               
Cow position:
               
chr13:29802939-29802801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
87-274
               

               
Cow position:
               
chr13:50750961-50751148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
87-274
               

               
Cow position:
               
chr13:53553170-53553354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
146, 65
               

               
Conread position:
               
87-313
               

               
Cow position:
               
chr13:11397366-11397579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
87-404
               

               
Cow position:
               
chr13:25978098-25978423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
87-410
               

               
Cow position:
               
chr13:56034766-56035093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 75
               

               
Conread position:
               
88-270
               

               
Cow position:
               
chr13:16187806-16187984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
145, 8
               

               
Conread position:
               
89-274
               

               
Cow position:
               
chr13:9385937-9386113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
89-314
               

               
Cow position:
               
chr13:51901683-51901452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
89-315
               

               
Cow position:
               
chr13:3211642-3211416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
145, 76
               

               
Conread position:
               
89-416
               

               
Cow position:
               
chr13:52477555-52477886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 73
               

               
Conread position:
               
89-418
               

               
Cow position:
               
chr13:20137915-20137580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
90-254
               

               
Cow position:
               
chr13:15964408-15964244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 144
               

               
Conread position:
               
90-409
               

               
Cow position:
               
chr13:45073167-45073477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
91-358
               

               
Cow position:
               
chr13:20871478-20871214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
91-419
               

               
Cow position:
               
chr13:28291414-28291076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 182
               

               
Conread position:
               
92-295
               

               
Cow position:
               
chr13:48862008-48862208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
92-410
               

               
Cow position:
               
chr13:10040447-10040789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
93-280
               

               
Cow position:
               
chr13:18005759-18005575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
95-261
               

               
Cow position:
               
chr13:26120278-26120439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
100-394
               

               
Cow position:
               
chr13:13196321-13196023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
100-416
               

               
Cow position:
               
chr13:7149308-7148996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
102-406
               

               
Cow position:
               
chr13:20115328-20115014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
78, 8
               

               
Conread position:
               
103-304
               

               
Cow position:
               
chr13:9981764-9981962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
129, 59
               

               
Conread position:
               
103-409
               

               
Cow position:
               
chr13:21170607-21170296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
103-419
               

               
Cow position:
               
chr13:39939490-39939810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
106-301
               

               
Cow position:
               
chr13:13913178-13913364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
127, 49
               

               
Conread position:
               
106-315
               

               
Cow position:
               
chr13:827316-827113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
106-375
               

               
Cow position:
               
chr13:19778775-19779054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 58
               

               
Conread position:
               
106-394
               

               
Cow position:
               
chr13:11231231-11231515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
106-394
               

               
Cow position:
               
chr13:20868682-20868964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
250, 31
               

               
Conread position:
               
110-397
               

               
Cow position:
               
chr13:42672352-42672653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
124, 51
               

               
Conread position:
               
110-404
               

               
Cow position:
               
chr13:14411956-14411663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
123, 46
               

               
Conread position:
               
110-410
               

               
Cow position:
               
chr13:15757190-15756882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
111-408
               

               
Cow position:
               
chr13:6861251-6860945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
111-417
               

               
Cow position:
               
chr13:55162280-55161964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
112-297
               

               
Cow position:
               
chr13:29123373-29123189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 68
               

               
Conread position:
               
112-315
               

               
Cow position:
               
chr13:17563804-17563607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
119, 49
               

               
Conread position:
               
116-362
               

               
Cow position:
               
chr13:13211950-13211705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
116, 28
               

               
Conread position:
               
116-389
               

               
Cow position:
               
chr13:20314555-20314838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
116-392
               

               
Cow position:
               
chr13:62008176-62007891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
116-395
               

               
Cow position:
               
chr13:15239456-15239731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
118-315
               

               
Cow position:
               
chr13:17838011-17837818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
118-315
               

               
Cow position:
               
chr13:24110548-24110347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
119-405
               

               
Cow position:
               
chr13:18197546-18197833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 43
               

               
Conread position:
               
120-403
               

               
Cow position:
               
chr13:11103131-11103437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 47
               

               
Conread position:
               
121-307
               

               
Cow position:
               
chr13:18181714-18181900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
113, 46
               

               
Conread position:
               
124-403
               

               
Cow position:
               
chr13:45108356-45108625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
125-314
               

               
Cow position:
               
chr13:17350408-17350223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
125-389
               

               
Cow position:
               
chr13:19007987-19007730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
196, 37
               

               
Conread position:
               
128-393
               

               
Cow position:
               
chr13:16020904-16020642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
105, 39
               

               
Conread position:
               
128-403
               

               
Cow position:
               
chr13:17089471-17089740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
131-384
               

               
Cow position:
               
chr13:35557056-35557319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr13:21171523-21171795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr13:25504582-25504309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr13:17611501-17611785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 31
               

               
Conread position:
               
131-412
               

               
Cow position:
               
chr13:52640901-52641188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
134-302
               

               
Cow position:
               
chr13:15460728-15460896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
101, 33
               

               
Conread position:
               
136-356
               

               
Cow position:
               
chr13:29663074-29662860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
95, 52
               

               
Conread position:
               
137-398
               

               
Cow position:
               
chr13:55494477-55494741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 173
               

               
Conread position:
               
137-410
               

               
Cow position:
               
chr13:28440492-28440768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 96
               

               
Conread position:
               
138-325
               

               
Cow position:
               
chr13:8350373-8350180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
139-419
               

               
Cow position:
               
chr13:52459441-52459721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
140-392
               

               
Cow position:
               
chr13:7149473-7149715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
142-406
               

               
Cow position:
               
chr13:34873629-34873357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
143-354
               

               
Cow position:
               
chr13:16160459-16160245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
27, 91
               

               
Conread position:
               
144-392
               

               
Cow position:
               
chr13:38035872-38035623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 18
               

               
Conread position:
               
145-420
               

               
Cow position:
               
chr13:33601195-33601476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
89, 22
               

               
Conread position:
               
147-303
               

               
Cow position:
               
chr13:31529912-31529757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
147-407
               

               
Cow position:
               
chr13:84615-84357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 155
               

               
Conread position:
               
151-415
               

               
Cow position:
               
chr13:49392914-49393189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
152-393
               

               
Cow position:
               
chr13:57985907-57986151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
84, 165
               

               
Conread position:
               
152-408
               

               
Cow position:
               
chr13:43525205-43525481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
153-304
               

               
Cow position:
               
chr13:48465806-48465953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
154-408
               

               
Cow position:
               
chr13:45439553-45439298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
156-298
               

               
Cow position:
               
chr13:47634533-47634391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
158-410
               

               
Cow position:
               
chr13:56535480-56535233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 65
               

               
Conread position:
               
162-325
               

               
Cow position:
               
chr13:49255214-49255383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 154
               

               
Conread position:
               
162-401
               

               
Cow position:
               
chr13:8233019-8232794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
162-406
               

               
Cow position:
               
chr13:33054352-33054602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 131
               

               
Conread position:
               
163-408
               

               
Cow position:
               
chr13:21980955-21981203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
166-302
               

               
Cow position:
               
chr13:51813918-51814051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
166-307
               

               
Cow position:
               
chr13:62304811-62304954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
68, 52
               

               
Conread position:
               
166-314
               

               
Cow position:
               
chr13:37621343-37621489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
166-408
               

               
Cow position:
               
chr13:15083676-15083428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
151, 57
               

               
Conread position:
               
167-393
               

               
Cow position:
               
chr13:7046886-7046663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
167-402
               

               
Cow position:
               
chr13:1462281-1462515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
150, 46
               

               
Conread position:
               
168-403
               

               
Cow position:
               
chr13:42640397-42640153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
169-315
               

               
Cow position:
               
chr13:40634880-40634731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
169-387
               

               
Cow position:
               
chr13:19598651-19598876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
169-405
               

               
Cow position:
               
chr13:18340547-18340300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
169-411
               

               
Cow position:
               
chr13:14645066-14644820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
169-412
               

               
Cow position:
               
chr13:14927274-14927017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
55, 97
               

               
Conread position:
               
169-416
               

               
Cow position:
               
chr13:50646621-50646869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
170-402
               

               
Cow position:
               
chr13:25941250-25941489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
73, 123
               

               
Conread position:
               
172-397
               

               
Cow position:
               
chr13:37614180-37614419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
47, 12
               

               
Conread position:
               
174-308
               

               
Cow position:
               
chr13:52880859-52880991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
175-385
               

               
Cow position:
               
chr13:6926525-6926303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
175-404
               

               
Cow position:
               
chr13:20520069-20519845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 142
               

               
Conread position:
               
175-415
               

               
Cow position:
               
chr13:51695976-51695729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
176-401
               

               
Cow position:
               
chr13:6486244-6486477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
128, 57
               

               
Conread position:
               
176-410
               

               
Cow position:
               
chr13:49356042-49356281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 223
               

               
Conread position:
               
176-411
               

               
Cow position:
               
chr13:15143836-15144066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
186, 128
               

               
Conread position:
               
178-397
               

               
Cow position:
               
chr13:15061476-15061710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
43, 224
               

               
Conread position:
               
181-397
               

               
Cow position:
               
chr13:54652327-54652530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
181-403
               

               
Cow position:
               
chr13:8699735-8699968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 222
               

               
Conread position:
               
183-324
               

               
Cow position:
               
chr13:18866727-18866585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
36, 113
               

               
Conread position:
               
183-392
               

               
Cow position:
               
chr13:8450330-8450117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 140
               

               
Conread position:
               
185-354
               

               
Cow position:
               
chr13:38702878-38703054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 99
               

               
Conread position:
               
185-385
               

               
Cow position:
               
chr13:18092877-18093078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 59
               

               
Conread position:
               
185-399
               

               
Cow position:
               
chr13:10522932-10522715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
142, 48
               

               
Conread position:
               
185-413
               

               
Cow position:
               
chr13:10210661-10210893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
186-400
               

               
Cow position:
               
chr13:42849136-42849354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
187-405
               

               
Cow position:
               
chr13:30148567-30148783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
46, 171
               

               
Conread position:
               
189-325
               

               
Cow position:
               
chr13:21295069-21294931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
189-394
               

               
Cow position:
               
chr13:15069951-15069754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
171, 120
               

               
Conread position:
               
189-421
               

               
Cow position:
               
chr13:17813465-17813226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
45, 155
               

               
Conread position:
               
190-419
               

               
Cow position:
               
chr13:28439403-28439173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 168
               

               
Conread position:
               
191-417
               

               
Cow position:
               
chr13:9124917-9124686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 71
               

               
Conread position:
               
192-418
               

               
Cow position:
               
chr13:53850815-53850578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
193-413
               

               
Cow position:
               
chr13:57769999-57770221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
194-315
               

               
Cow position:
               
chr13:6962441-6962320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
194-402
               

               
Cow position:
               
chr13:24094328-24094544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
195-397
               

               
Cow position:
               
chr13:49283792-49284000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
195-417
               

               
Cow position:
               
chr13:3594309-3594091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
196-393
               

               
Cow position:
               
chr13:13265544-13265347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
196-412
               

               
Cow position:
               
chr13:13283334-13283103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
197-407
               

               
Cow position:
               
chr13:33854698-33854911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
37, 198
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr13:58422054-58421876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
161, 18
               

               
Conread position:
               
198-398
               

               
Cow position:
               
chr13:52027152-52027359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
198-416
               

               
Cow position:
               
chr13:51249395-51249617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
200-303
               

               
Cow position:
               
chr13:16156242-16156346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
200-393
               

               
Cow position:
               
chr13:6113541-6113749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
200-402
               

               
Cow position:
               
chr13:53865619-53865407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
201-405
               

               
Cow position:
               
chr13:21277485-21277682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 110
               

               
Conread position:
               
202-308
               

               
Cow position:
               
chr13:12237426-12237319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
203-389
               

               
Cow position:
               
chr13:52913853-52913663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
203-417
               

               
Cow position:
               
chr13:37554894-37555112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
204-402
               

               
Cow position:
               
chr13:16790188-16789994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
205-402
               

               
Cow position:
               
chr13:17994396-17994600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
206-402
               

               
Cow position:
               
chr13:41979172-41979364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
128, 21
               

               
Conread position:
               
206-406
               

               
Cow position:
               
chr13:3153727-3153519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
206-406
               

               
Cow position:
               
chr13:45499206-45499000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
208-402
               

               
Cow position:
               
chr13:16099146-16099355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
209-315
               

               
Cow position:
               
chr13:3701180-3701076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr13:6975871-6976042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr13:16163556-16163359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
209-405
               

               
Cow position:
               
chr13:22345303-22345504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
209-412
               

               
Cow position:
               
chr13:21246735-21246951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
210-410
               

               
Cow position:
               
chr13:26423024-26422804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 202
               

               
Conread position:
               
210-416
               

               
Cow position:
               
chr13:13796838-13797059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr13:34532960-34533157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
214-392
               

               
Cow position:
               
chr13:11565806-11565623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
215-362
               

               
Cow position:
               
chr13:1037607-1037454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
215-405
               

               
Cow position:
               
chr13:57323114-57322920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
215-414
               

               
Cow position:
               
chr13:24796846-24796648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
215-416
               

               
Cow position:
               
chr13:8537790-8537579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 188
               

               
Conread position:
               
217-363
               

               
Cow position:
               
chr13:52249082-52249227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
217-384
               

               
Cow position:
               
chr13:16525257-16525436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
217-413
               

               
Cow position:
               
chr13:48127074-48126867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
219-393
               

               
Cow position:
               
chr13:5930344-5930528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
221-406
               

               
Cow position:
               
chr13:55775322-55775134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 43
               

               
Conread position:
               
225-402
               

               
Cow position:
               
chr13:28081680-28081489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
225-402
               

               
Cow position:
               
chr13:55713478-55713652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
227-402
               

               
Cow position:
               
chr13:23478856-23478674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
227-410
               

               
Cow position:
               
chr13:1339185-1339379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
228-393
               

               
Cow position:
               
chr13:20440662-20440830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
80, 5
               

               
Conread position:
               
228-417
               

               
Cow position:
               
chr13:37946434-37946628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
6, 48
               

               
Conread position:
               
228-421
               

               
Cow position:
               
chr13:390685-390880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 166
               

               
Conread position:
               
229-417
               

               
Cow position:
               
chr13:38683063-38683266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
230-387
               

               
Cow position:
               
chr13:26395413-26395248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
230-402
               

               
Cow position:
               
chr13:23399718-23399543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
87, 160
               

               
Conread position:
               
230-404
               

               
Cow position:
               
chr13:53619956-53619771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
230-405
               

               
Cow position:
               
chr13:9613014-9612848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
230-407
               

               
Cow position:
               
chr13:13225840-13225667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
230-411
               

               
Cow position:
               
chr13:23823082-23823264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
232-417
               

               
Cow position:
               
chr13:28605441-28605638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
233-388
               

               
Cow position:
               
chr13:714510-714676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
233-393
               

               
Cow position:
               
chr13:5175546-5175382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
233-402
               

               
Cow position:
               
chr13:6012774-6012946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 100
               

               
Conread position:
               
233-402
               

               
Cow position:
               
chr13:43342517-43342341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
233-406
               

               
Cow position:
               
chr13:37405660-37405483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
84, 115
               

               
Conread position:
               
233-411
               

               
Cow position:
               
chr13:10758076-10757904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
233-415
               

               
Cow position:
               
chr13:47538211-47538392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
129, 86
               

               
Conread position:
               
233-421
               

               
Cow position:
               
chr13:6951528-6951334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
234-390
               

               
Cow position:
               
chr13:27198856-27198700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
83, 120
               

               
Conread position:
               
235-413
               

               
Cow position:
               
chr13:17975016-17975199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 110
               

               
Conread position:
               
236-395
               

               
Cow position:
               
chr13:23795442-23795599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 7
               

               
Conread position:
               
236-402
               

               
Cow position:
               
chr13:5659821-5659993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
240-392
               

               
Cow position:
               
chr13:14782284-14782132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 117
               

               
Conread position:
               
241-414
               

               
Cow position:
               
chr13:47651475-47651652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
243-385
               

               
Cow position:
               
chr13:25313210-25313358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 50
               

               
Conread position:
               
244-400
               

               
Cow position:
               
chr13:16106352-16106197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
250-414
               

               
Cow position:
               
chr13:25924290-25924468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
252-417
               

               
Cow position:
               
chr13:8312327-8312482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr13:41474802-41474637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
253-392
               

               
Cow position:
               
chr13:25062106-25061967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
253-402
               

               
Cow position:
               
chr13:27727122-27726977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
255-411
               

               
Cow position:
               
chr13:62260439-62260285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
266-413
               

               
Cow position:
               
chr13:48165830-48165976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
96, 51
               

               
Conread position:
               
273-395
               

               
Cow position:
               
chr13:30809464-30809594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               
Show alignments to all cow chromosomes.