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Cow genome map

           
Conread name:
           
rcmu37_n4.y1
        

               
Conread position:
               
1-113
               

               
Cow position:
               
chr18:33882884-33882770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 87
               

               
Conread position:
               
1-114
               

               
Cow position:
               
chr18:11811752-11811863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr18:16184654-16184533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1-139
               

               
Cow position:
               
chr18:48407563-48407703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
42, 122
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr18:27388323-27388474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr18:39709664-39709812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 111
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr18:9818610-9818764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr18:24636288-24636431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr18:3098540-3098386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr18:35827641-35827478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr18:23808099-23807935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr18:28823195-28823025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr18:55716074-55715902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr18:19159191-19159027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr18:11233205-11233380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr18:29388000-29388176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr18:48036542-48036734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 131
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr18:11367989-11367791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr18:19761472-19761665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 56
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr18:52864542-52864343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 165
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr18:4316081-4316279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr18:41270864-41271059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr18:48290664-48290466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:35076160-35076367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
152, 21
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:49665378-49665177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr18:17380348-17380543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr18:47314520-47314304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr18:47868229-47868441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 174
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:1582509-1582291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:11166753-11166961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
77, 167
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:14872092-14871890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:18562764-18562556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
77, 49
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:49161682-49161456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 181
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr18:29649918-29649702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr18:601400-601191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
159, 49
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr18:81530-81733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr18:6290557-6290770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr18:24946039-24945818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr18:24022154-24022376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr18:33606406-33606619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr18:56150882-56150652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr18:219106-219334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr18:35636576-35636345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr18:21205140-21205364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr18:48453467-48453696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr18:56361827-56361593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
230, 89
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr18:44549133-44548902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr18:16417923-16417689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr18:268037-267801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 12
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr18:14048487-14048729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr18:42966628-42966885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 183
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:11831912-11832143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
230, 42
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr18:4858134-4857858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr18:26535743-26535478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr18:46436979-46436734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
232, 48
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr18:14815561-14815311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:4078578-4078834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
173, 80
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:8964314-8964555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr18:35537456-35537196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr18:49200414-49200676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 106
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:17649962-17649694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:42455251-42454978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
82, 104
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr18:55552739-55553011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 158
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr18:25206418-25206141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 163
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr18:44483985-44483711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr18:51211956-51212249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr18:4182418-4182121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr18:13507958-13507673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr18:48829013-48828704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 240
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr18:55397079-55397370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:4540102-4539810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 49
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:5995241-5995542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 112
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:31586591-31586303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:51656279-51655970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 174
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:52635309-52634998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr18:56172246-56171942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 173
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr18:28768139-28768442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr18:45570795-45571086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 40
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr18:3166713-3166412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
170, 45
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr18:47517435-47517128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:11684762-11685060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 97
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:22411843-22411533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
36, 283
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:23766643-23766331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 165
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:28924058-28923770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 40
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:33793482-33793768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:34527328-34527017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 144
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:35012532-35012239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
235, 42
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr18:43020616-43020326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr18:10656219-10656522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
225, 117
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr18:36458708-36459014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:29058722-29058417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:56183711-56184019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:3158829-3158509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 187
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:19273331-19273011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 67
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:25647476-25647162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 40
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:25984799-25984492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 166
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:37002403-37002717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:37023783-37023465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 178
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:45104673-45104353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:51392872-51392558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
44, 136
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:23424703-23425007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
186, 22
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr18:6610083-6609764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:5711893-5711554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr18:15025453-15025779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 21
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr18:21192635-21192311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
93, 19
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr18:3044204-3044552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 233
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:32773652-32773985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
51, 103
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr18:11183715-11184091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 170
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr18:37382324-37381939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 210
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr18:26998638-26999043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
36, 182
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr18:2270730-2270357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr18:33158737-33159105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr18:55498836-55499232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr18:47183510-47183149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 155
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr18:10575882-10576268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 103
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr18:3132971-3132607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr18:16044380-16043983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 141
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr18:19645948-19646323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:20127329-20126957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 77
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:46048535-46048923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:46453104-46452714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 130
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:2592399-2591989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 165
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:3027592-3027172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 164
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:12058791-12059164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 30
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:21195564-21195177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 99
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:32883075-32883462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 171
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:43823179-43822781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr18:55782648-55782264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
42, 151
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr18:18919179-18918792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr18:45904118-45903724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 33
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:20271246-20270838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
229, 153
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr18:29796650-29796276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 38
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:1144421-1144019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 132
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:38985461-38985865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 165
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:39662559-39662957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr18:50082471-50082089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 42
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr18:50382032-50382428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 101
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:29356856-29356453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 178
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:42479818-42479402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 170
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr18:44262396-44262802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr18:12113594-12113188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr18:16227335-16227743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr18:28658140-28657739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 163
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr18:9557752-9558148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 146
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr18:18962066-18961653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr18:26355259-26354858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr18:49100594-49100201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 29
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:7487030-7487420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:29958373-29957995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 30
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:31672733-31672334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr18:39115370-39114932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr18:4749109-4748699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr18:29648555-29648964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr18:17391200-17390804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 40
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr18:55000968-55000550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:18592246-18592648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:19849977-19849587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 25
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:55692594-55693008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
153, 54
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr18:51406130-51405729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr18:56181681-56181270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 30
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr18:4668718-4668316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr18:306290-305871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
42, 100
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr18:22121108-22120696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 153
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr18:9089476-9089881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 15
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr18:7955916-7956338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr18:45961487-45961096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
153, 33
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr18:12023859-12023440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 36
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:4496114-4495696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 152
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:13359834-13360230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
42, 94
               

               
Conread position:
               
2-115
               

               
Cow position:
               
chr18:3422495-3422608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
2-124
               

               
Cow position:
               
chr18:31082556-31082433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
2-125
               

               
Cow position:
               
chr18:20797875-20797997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr18:35058114-35058271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr18:49543253-49543406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr18:56168145-56167986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr18:26286686-26286868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
2-198
               

               
Cow position:
               
chr18:7059005-7059189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
2-200
               

               
Cow position:
               
chr18:8164265-8164064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr18:11680495-11680697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr18:35582327-35582117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr18:2608954-2608738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr18:32121287-32121051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
2-253
               

               
Cow position:
               
chr18:33407385-33407640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 169
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr18:12809634-12809879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr18:8105169-8104914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr18:895802-896056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
41, 63
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr18:5487026-5487282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr18:30248353-30248098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
206, 64
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr18:3115234-3115503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 154
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr18:55589700-55589430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:15881082-15880772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 58
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr18:4666438-4666145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr18:19619723-19620015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr18:30794209-30794500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 126
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr18:24856070-24855766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
229, 120
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr18:38686867-38687163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 101
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr18:11322367-11322681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr18:21768402-21768698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr18:39875484-39875175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 160
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr18:40758990-40759305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 67
               

               
Conread position:
               
2-329
               

               
Cow position:
               
chr18:1495080-1495399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
231, 100
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr18:29065604-29065233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
2-383
               

               
Cow position:
               
chr18:5578077-5578455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 164
               

               
Conread position:
               
2-383
               

               
Cow position:
               
chr18:42747369-42747759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr18:15172807-15173168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 107
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr18:12242055-12242443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr18:47511770-47512161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr18:17005025-17005418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 166
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr18:26938758-26939141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr18:7649769-7650145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr18:10977436-10977045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr18:11691637-11691236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr18:11779441-11779820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 17
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr18:33896648-33896243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 53
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr18:3416946-3417337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr18:10954249-10954639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr18:3180195-3180587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 140
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr18:55119652-55120044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr18:12118069-12117674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 88
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr18:11867122-11867518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 29
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr18:28101401-28101806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr18:23447307-23446882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 384
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr18:51443656-51443273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr18:20126076-20126474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 144
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr18:43283983-43283570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 101
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr18:3018304-3017906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr18:10891301-10891697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 39
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr18:42432313-42431900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 24
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr18:48713328-48713732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 32
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr18:247909-247505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr18:50637688-50637294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
3-114
               

               
Cow position:
               
chr18:56163363-56163474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-132
               

               
Cow position:
               
chr18:32244239-32244115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
104, 28
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr18:34621591-34621375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr18:19363707-19363969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr18:4628808-4629080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
78, 172
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr18:4381068-4381359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 13
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr18:44802108-44801815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 28
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr18:33157597-33157900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 50
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr18:7359510-7359841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
29, 149
               

               
Conread position:
               
3-385
               

               
Cow position:
               
chr18:7951976-7952372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr18:8171304-8170922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr18:3209490-3209890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr18:9974550-9974160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 158
               

               
Conread position:
               
3-401
               

               
Cow position:
               
chr18:43806227-43806632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
43, 161
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr18:22790299-22789913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr18:42431829-42431432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 34
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr18:14586700-14586293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 169
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr18:10322576-10322987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 148
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr18:51691692-51691276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr18:51712933-51712531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr18:23715111-23714691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
6, 49
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr18:13293286-13293459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 46
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr18:26586887-26586684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
39, 158
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr18:52658197-52658392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
4-223
               

               
Cow position:
               
chr18:54658078-54658304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr18:14085238-14085461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
74, 96
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr18:36097978-36098225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr18:51827072-51827314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr18:20864760-20865024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr18:24957073-24957341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr18:11618255-11618519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr18:4673091-4673376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:29759824-29760101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 35
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:33007833-33008140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 162
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr18:46727373-46727662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr18:25282776-25282476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr18:54974212-54973881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr18:6309857-6310242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr18:9365689-9366084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 176
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr18:55789215-55788829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr18:2619420-2619036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr18:2864222-2863834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 318
               

               
Conread position:
               
4-394
               

               
Cow position:
               
chr18:4884738-4884347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 97
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr18:33299674-33300085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr18:53962461-53962663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
5-219
               

               
Cow position:
               
chr18:52632626-52632419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr18:42060857-42061108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 92
               

               
Conread position:
               
5-284
               

               
Cow position:
               
chr18:35797402-35797673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr18:1585338-1585035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr18:55787703-55787999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 160
               

               
Conread position:
               
5-315
               

               
Cow position:
               
chr18:56159242-56159546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr18:20174352-20173974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
5-405
               

               
Cow position:
               
chr18:20641707-20641319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
6-150
               

               
Cow position:
               
chr18:5647025-5647171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
6-186
               

               
Cow position:
               
chr18:18815894-18815712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
6-272
               

               
Cow position:
               
chr18:4369001-4368737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr18:7947164-7947437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 167
               

               
Conread position:
               
6-302
               

               
Cow position:
               
chr18:21102990-21102704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
78, 27
               

               
Conread position:
               
6-321
               

               
Cow position:
               
chr18:39434602-39434916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 85
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr18:10904625-10905016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr18:19143741-19143323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
7-256
               

               
Cow position:
               
chr18:43065289-43065556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 148
               

               
Conread position:
               
8-178
               

               
Cow position:
               
chr18:29188790-29188964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
8-204
               

               
Cow position:
               
chr18:16847473-16847668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
9-302
               

               
Cow position:
               
chr18:38344584-38344878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
5, 208
               

               
Conread position:
               
9-419
               

               
Cow position:
               
chr18:380726-381116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
224, 12
               

               
Conread position:
               
10-170
               

               
Cow position:
               
chr18:36445221-36445384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr18:28085354-28085574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
94, 152
               

               
Conread position:
               
10-243
               

               
Cow position:
               
chr18:54056341-54056563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 143
               

               
Conread position:
               
10-256
               

               
Cow position:
               
chr18:47812253-47812496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
10-401
               

               
Cow position:
               
chr18:5189909-5189513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
11-329
               

               
Cow position:
               
chr18:16726430-16726744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
11-341
               

               
Cow position:
               
chr18:16050110-16049789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
11-346
               

               
Cow position:
               
chr18:11377145-11377479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
11-401
               

               
Cow position:
               
chr18:52877167-52877529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
226, 23
               

               
Conread position:
               
12-274
               

               
Cow position:
               
chr18:52637743-52637485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 150
               

               
Conread position:
               
12-420
               

               
Cow position:
               
chr18:12270296-12270709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 31
               

               
Conread position:
               
13-254
               

               
Cow position:
               
chr18:6103313-6103073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
13-401
               

               
Cow position:
               
chr18:1954808-1954400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 122
               

               
Conread position:
               
13-418
               

               
Cow position:
               
chr18:6881566-6881165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 104
               

               
Conread position:
               
14-204
               

               
Cow position:
               
chr18:18868530-18868728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
15-315
               

               
Cow position:
               
chr18:45637608-45637331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
15-408
               

               
Cow position:
               
chr18:7415242-7414850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 150
               

               
Conread position:
               
15-408
               

               
Cow position:
               
chr18:29371656-29372056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 104
               

               
Conread position:
               
17-262
               

               
Cow position:
               
chr18:16842276-16842026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
89, 153
               

               
Conread position:
               
17-389
               

               
Cow position:
               
chr18:3211658-3212046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
18-272
               

               
Cow position:
               
chr18:36184114-36183864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
19, 107
               

               
Conread position:
               
18-314
               

               
Cow position:
               
chr18:36230931-36230643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
18-314
               

               
Cow position:
               
chr18:47828613-47828902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
19-164
               

               
Cow position:
               
chr18:6127285-6127143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 92
               

               
Conread position:
               
19-202
               

               
Cow position:
               
chr18:43564023-43564197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
19-415
               

               
Cow position:
               
chr18:3193496-3193899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 136
               

               
Conread position:
               
19-420
               

               
Cow position:
               
chr18:55505199-55505596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 5
               

               
Conread position:
               
21-202
               

               
Cow position:
               
chr18:26937516-26937692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
21-219
               

               
Cow position:
               
chr18:15340651-15340456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
21-421
               

               
Cow position:
               
chr18:179237-178836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 152
               

               
Conread position:
               
22-393
               

               
Cow position:
               
chr18:1399561-1399182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
22-407
               

               
Cow position:
               
chr18:7108920-7109312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 146
               

               
Conread position:
               
24-164
               

               
Cow position:
               
chr18:15810113-15809975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
24-176
               

               
Cow position:
               
chr18:1588815-1588661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr18:22214278-22214560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
25-274
               

               
Cow position:
               
chr18:3387325-3387071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
25-411
               

               
Cow position:
               
chr18:18340168-18339773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 16
               

               
Conread position:
               
26-354
               

               
Cow position:
               
chr18:48451847-48452193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 158
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr18:4648944-4648735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 106
               

               
Conread position:
               
27-301
               

               
Cow position:
               
chr18:51500274-51500006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
27-378
               

               
Cow position:
               
chr18:7416731-7417064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
27-416
               

               
Cow position:
               
chr18:52472297-52472696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 246
               

               
Conread position:
               
28-394
               

               
Cow position:
               
chr18:9010523-9010876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 53
               

               
Conread position:
               
28-418
               

               
Cow position:
               
chr18:51298278-51298656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 163
               

               
Conread position:
               
31-280
               

               
Cow position:
               
chr18:52704049-52703796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
31-316
               

               
Cow position:
               
chr18:27109493-27109206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 136
               

               
Conread position:
               
32-397
               

               
Cow position:
               
chr18:30360330-30359967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 63
               

               
Conread position:
               
33-301
               

               
Cow position:
               
chr18:21175992-21176257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
34-231
               

               
Cow position:
               
chr18:27637017-27637212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 70
               

               
Conread position:
               
34-304
               

               
Cow position:
               
chr18:18369556-18369288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 187
               

               
Conread position:
               
34-316
               

               
Cow position:
               
chr18:19896649-19896365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
34-348
               

               
Cow position:
               
chr18:35419617-35419931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
34-412
               

               
Cow position:
               
chr18:39623606-39623990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
47, 6
               

               
Conread position:
               
36-385
               

               
Cow position:
               
chr18:15614050-15613702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 18
               

               
Conread position:
               
36-406
               

               
Cow position:
               
chr18:10214389-10214007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
37-393
               

               
Cow position:
               
chr18:4602200-4601875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
326, 39
               

               
Conread position:
               
37-393
               

               
Cow position:
               
chr18:11790743-11791088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 77
               

               
Conread position:
               
37-401
               

               
Cow position:
               
chr18:16313193-16313559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 102
               

               
Conread position:
               
39-307
               

               
Cow position:
               
chr18:16686525-16686258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 122
               

               
Conread position:
               
39-314
               

               
Cow position:
               
chr18:36746443-36746175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
39-364
               

               
Cow position:
               
chr18:22143724-22143393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 139
               

               
Conread position:
               
39-373
               

               
Cow position:
               
chr18:39001991-39001664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
39-389
               

               
Cow position:
               
chr18:5072599-5072251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
194, 14
               

               
Conread position:
               
39-393
               

               
Cow position:
               
chr18:22056057-22055691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
7, 43
               

               
Conread position:
               
39-400
               

               
Cow position:
               
chr18:46276497-46276120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
39-402
               

               
Cow position:
               
chr18:8299825-8300187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 222
               

               
Conread position:
               
39-420
               

               
Cow position:
               
chr18:29080634-29080990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
194, 48
               

               
Conread position:
               
40-274
               

               
Cow position:
               
chr18:346689-346454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
40-337
               

               
Cow position:
               
chr18:47835639-47835930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
41-304
               

               
Cow position:
               
chr18:51190777-51190525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
43-393
               

               
Cow position:
               
chr18:15517349-15517005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 54
               

               
Conread position:
               
46-304
               

               
Cow position:
               
chr18:36201807-36201555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
47-321
               

               
Cow position:
               
chr18:21740990-21740722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 113
               

               
Conread position:
               
47-390
               

               
Cow position:
               
chr18:28930810-28930474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 70
               

               
Conread position:
               
48-300
               

               
Cow position:
               
chr18:55461887-55461639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 104
               

               
Conread position:
               
48-410
               

               
Cow position:
               
chr18:43555704-43555325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 113
               

               
Conread position:
               
49-231
               

               
Cow position:
               
chr18:21401797-21401614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
49-254
               

               
Cow position:
               
chr18:36297211-36296989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
49-362
               

               
Cow position:
               
chr18:23821995-23821693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
50-224
               

               
Cow position:
               
chr18:10861615-10861436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 131
               

               
Conread position:
               
50-383
               

               
Cow position:
               
chr18:5766235-5766569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 117
               

               
Conread position:
               
50-407
               

               
Cow position:
               
chr18:55747506-55747872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
52-419
               

               
Cow position:
               
chr18:4330779-4331151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
53-270
               

               
Cow position:
               
chr18:55806808-55806593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
54-304
               

               
Cow position:
               
chr18:38607050-38607295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
54-392
               

               
Cow position:
               
chr18:19193539-19193202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 111
               

               
Conread position:
               
57-421
               

               
Cow position:
               
chr18:30586390-30586039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 48
               

               
Conread position:
               
58-302
               

               
Cow position:
               
chr18:51850729-51850492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
58-385
               

               
Cow position:
               
chr18:48633623-48633939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
244, 66
               

               
Conread position:
               
60-284
               

               
Cow position:
               
chr18:31125388-31125174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
60-402
               

               
Cow position:
               
chr18:43950656-43951010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
173, 108
               

               
Conread position:
               
61-301
               

               
Cow position:
               
chr18:39022095-39022329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
172, 69
               

               
Conread position:
               
62-400
               

               
Cow position:
               
chr18:50205957-50205621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
63-257
               

               
Cow position:
               
chr18:4952373-4952183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
63-270
               

               
Cow position:
               
chr18:30405825-30405620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
63-389
               

               
Cow position:
               
chr18:36264930-36264615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
168, 98
               

               
Conread position:
               
63-421
               

               
Cow position:
               
chr18:1571401-1571041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 99
               

               
Conread position:
               
64-362
               

               
Cow position:
               
chr18:35873911-35874214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
16, 108
               

               
Conread position:
               
64-402
               

               
Cow position:
               
chr18:51594965-51594636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 52
               

               
Conread position:
               
64-418
               

               
Cow position:
               
chr18:42290485-42290138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
64-418
               

               
Cow position:
               
chr18:42293213-42292866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
170, 20
               

               
Conread position:
               
65-305
               

               
Cow position:
               
chr18:11577926-11578149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
165, 65
               

               
Conread position:
               
66-245
               

               
Cow position:
               
chr18:29991680-29991495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
66-266
               

               
Cow position:
               
chr18:10117343-10117537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
167, 65
               

               
Conread position:
               
66-391
               

               
Cow position:
               
chr18:4556330-4555996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
66-405
               

               
Cow position:
               
chr18:51515428-51515080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
68-313
               

               
Cow position:
               
chr18:22274994-22274757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
68-411
               

               
Cow position:
               
chr18:20462853-20462520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 32
               

               
Conread position:
               
70-301
               

               
Cow position:
               
chr18:3370741-3370971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
70-411
               

               
Cow position:
               
chr18:25601475-25601137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
71-319
               

               
Cow position:
               
chr18:52854893-52855144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
71-419
               

               
Cow position:
               
chr18:30225701-30225336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
12, 336
               

               
Conread position:
               
72-274
               

               
Cow position:
               
chr18:51644177-51643974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 10
               

               
Conread position:
               
72-410
               

               
Cow position:
               
chr18:19687864-19688218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
72-411
               

               
Cow position:
               
chr18:12273502-12273838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
164, 92
               

               
Conread position:
               
73-416
               

               
Cow position:
               
chr18:53053398-53053036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
74-400
               

               
Cow position:
               
chr18:50095547-50095230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
75-315
               

               
Cow position:
               
chr18:19883377-19883618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
159, 93
               

               
Conread position:
               
75-394
               

               
Cow position:
               
chr18:29474588-29474909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
158, 191
               

               
Conread position:
               
76-304
               

               
Cow position:
               
chr18:46135591-46135815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
155, 55
               

               
Conread position:
               
76-354
               

               
Cow position:
               
chr18:858668-858953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
69, 82
               

               
Conread position:
               
76-390
               

               
Cow position:
               
chr18:51643517-51643202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 46
               

               
Conread position:
               
77-354
               

               
Cow position:
               
chr18:24266560-24266275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 73
               

               
Conread position:
               
77-378
               

               
Cow position:
               
chr18:36768955-36768661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
183, 78
               

               
Conread position:
               
77-390
               

               
Cow position:
               
chr18:5632115-5632432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 84
               

               
Conread position:
               
77-393
               

               
Cow position:
               
chr18:7963294-7963587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
154, 51
               

               
Conread position:
               
78-415
               

               
Cow position:
               
chr18:24508389-24508041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
80-402
               

               
Cow position:
               
chr18:23630746-23630436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
81-421
               

               
Cow position:
               
chr18:54130480-54130145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 85
               

               
Conread position:
               
82-405
               

               
Cow position:
               
chr18:49038316-49038635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 30
               

               
Conread position:
               
82-417
               

               
Cow position:
               
chr18:4264536-4264204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
175, 73
               

               
Conread position:
               
83-410
               

               
Cow position:
               
chr18:48242045-48242371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
142, 84
               

               
Conread position:
               
85-389
               

               
Cow position:
               
chr18:2146727-2146426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
87-401
               

               
Cow position:
               
chr18:49841138-49841462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 142
               

               
Conread position:
               
87-411
               

               
Cow position:
               
chr18:34813509-34813840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
87-411
               

               
Cow position:
               
chr18:42751752-42751400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
88-377
               

               
Cow position:
               
chr18:25006628-25006352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
89-391
               

               
Cow position:
               
chr18:38669942-38669654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
89-412
               

               
Cow position:
               
chr18:23623771-23623443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
90-402
               

               
Cow position:
               
chr18:49017365-49017661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
91-405
               

               
Cow position:
               
chr18:42988449-42988126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
36, 72
               

               
Conread position:
               
93-403
               

               
Cow position:
               
chr18:37303010-37303334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
94-415
               

               
Cow position:
               
chr18:55549595-55549927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
188, 60
               

               
Conread position:
               
95-402
               

               
Cow position:
               
chr18:31711698-31711398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 23
               

               
Conread position:
               
96-302
               

               
Cow position:
               
chr18:47967055-47966855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
98-416
               

               
Cow position:
               
chr18:35535274-35534956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 30
               

               
Conread position:
               
103-418
               

               
Cow position:
               
chr18:52403096-52402769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
105-416
               

               
Cow position:
               
chr18:33883662-33883973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
212, 57
               

               
Conread position:
               
106-315
               

               
Cow position:
               
chr18:4871952-4872148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 18
               

               
Conread position:
               
106-408
               

               
Cow position:
               
chr18:41258025-41257731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
197, 56
               

               
Conread position:
               
107-411
               

               
Cow position:
               
chr18:23162772-23163081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
197, 57
               

               
Conread position:
               
108-402
               

               
Cow position:
               
chr18:727912-728200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
109-301
               

               
Cow position:
               
chr18:52406583-52406763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
110-283
               

               
Cow position:
               
chr18:49268107-49267935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
110-410
               

               
Cow position:
               
chr18:12584961-12584656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
113-311
               

               
Cow position:
               
chr18:20798205-20798409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
115-325
               

               
Cow position:
               
chr18:11313051-11312842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
68, 111
               

               
Conread position:
               
116-233
               

               
Cow position:
               
chr18:41025259-41025144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
116-314
               

               
Cow position:
               
chr18:4535127-4534939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
116-393
               

               
Cow position:
               
chr18:43797065-43796788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 46
               

               
Conread position:
               
118-389
               

               
Cow position:
               
chr18:53642862-53642583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 133
               

               
Conread position:
               
118-398
               

               
Cow position:
               
chr18:46647258-46646995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
185, 22
               

               
Conread position:
               
120-307
               

               
Cow position:
               
chr18:1732969-1732796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
183, 35
               

               
Conread position:
               
121-302
               

               
Cow position:
               
chr18:56044450-56044625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
122-417
               

               
Cow position:
               
chr18:35367292-35367015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
123-388
               

               
Cow position:
               
chr18:5647706-5647973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
123-402
               

               
Cow position:
               
chr18:1931559-1931282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
194, 20
               

               
Conread position:
               
124-385
               

               
Cow position:
               
chr18:25598345-25598071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
124-395
               

               
Cow position:
               
chr18:42954169-42953905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
107, 8
               

               
Conread position:
               
124-415
               

               
Cow position:
               
chr18:22180888-22180592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 145
               

               
Conread position:
               
125-306
               

               
Cow position:
               
chr18:40035888-40036068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
125-310
               

               
Cow position:
               
chr18:53038724-53038913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
125-416
               

               
Cow position:
               
chr18:32189613-32189325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
131-318
               

               
Cow position:
               
chr18:17660654-17660472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
131-401
               

               
Cow position:
               
chr18:22569164-22568890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 35
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr18:3164610-3164334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
132-400
               

               
Cow position:
               
chr18:49015030-49015291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 97
               

               
Conread position:
               
133-420
               

               
Cow position:
               
chr18:32252264-32251967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
134-402
               

               
Cow position:
               
chr18:20318137-20317885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
134-420
               

               
Cow position:
               
chr18:21782599-21782883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
182, 28
               

               
Conread position:
               
136-302
               

               
Cow position:
               
chr18:56301798-56301964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
136-406
               

               
Cow position:
               
chr18:47416902-47417189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
138-298
               

               
Cow position:
               
chr18:9176811-9176967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
139-411
               

               
Cow position:
               
chr18:19868352-19868068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
143-397
               

               
Cow position:
               
chr18:14830929-14830685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
144-393
               

               
Cow position:
               
chr18:52413879-52414137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
150-389
               

               
Cow position:
               
chr18:14225310-14225554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
151-405
               

               
Cow position:
               
chr18:10051667-10051925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
152-377
               

               
Cow position:
               
chr18:22516611-22516382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
153-406
               

               
Cow position:
               
chr18:52251935-52251672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 257
               

               
Conread position:
               
156-308
               

               
Cow position:
               
chr18:23505257-23505409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
156-389
               

               
Cow position:
               
chr18:41950134-41950379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
157-405
               

               
Cow position:
               
chr18:37189369-37189106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
158-302
               

               
Cow position:
               
chr18:44523013-44523158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
159-388
               

               
Cow position:
               
chr18:47548059-47547817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
14, 124
               

               
Conread position:
               
160-419
               

               
Cow position:
               
chr18:16659504-16659234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 243
               

               
Conread position:
               
161-406
               

               
Cow position:
               
chr18:135724-135478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 104
               

               
Conread position:
               
162-389
               

               
Cow position:
               
chr18:24719243-24719475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
6, 156
               

               
Conread position:
               
162-397
               

               
Cow position:
               
chr18:31082417-31082169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
162-401
               

               
Cow position:
               
chr18:38211096-38211338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
162-408
               

               
Cow position:
               
chr18:18843945-18844195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
162-408
               

               
Cow position:
               
chr18:38601954-38601701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 234
               

               
Conread position:
               
164-389
               

               
Cow position:
               
chr18:4626854-4626624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 42
               

               
Conread position:
               
166-365
               

               
Cow position:
               
chr18:47705170-47705365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 145
               

               
Conread position:
               
166-385
               

               
Cow position:
               
chr18:35889160-35888926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
143, 46
               

               
Conread position:
               
166-393
               

               
Cow position:
               
chr18:51383460-51383228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
166-394
               

               
Cow position:
               
chr18:38937757-38937991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
167-403
               

               
Cow position:
               
chr18:52649411-52649159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
168-308
               

               
Cow position:
               
chr18:49324497-49324358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
168-315
               

               
Cow position:
               
chr18:46072400-46072548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
168-408
               

               
Cow position:
               
chr18:15809862-15809629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
168-420
               

               
Cow position:
               
chr18:31557223-31556960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
169-397
               

               
Cow position:
               
chr18:47824830-47824600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
148, 30
               

               
Conread position:
               
169-411
               

               
Cow position:
               
chr18:45558085-45558331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 149
               

               
Conread position:
               
171-323
               

               
Cow position:
               
chr18:47410484-47410637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
171-324
               

               
Cow position:
               
chr18:16378863-16379017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
171-391
               

               
Cow position:
               
chr18:40047558-40047336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
63, 87
               

               
Conread position:
               
172-399
               

               
Cow position:
               
chr18:49981498-49981281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 137
               

               
Conread position:
               
175-300
               

               
Cow position:
               
chr18:21081947-21081822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr18:2773448-2773204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
175-405
               

               
Cow position:
               
chr18:2776951-2776707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
178-304
               

               
Cow position:
               
chr18:2765200-2765323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
178-389
               

               
Cow position:
               
chr18:35786003-35786219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 139
               

               
Conread position:
               
179-403
               

               
Cow position:
               
chr18:44917705-44917936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
55, 129
               

               
Conread position:
               
181-301
               

               
Cow position:
               
chr18:41511555-41511432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
38, 11
               

               
Conread position:
               
182-401
               

               
Cow position:
               
chr18:42427571-42427793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
52, 209
               

               
Conread position:
               
182-408
               

               
Cow position:
               
chr18:50632491-50632262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
182-419
               

               
Cow position:
               
chr18:40063040-40063290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 115
               

               
Conread position:
               
183-407
               

               
Cow position:
               
chr18:32253557-32253322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
186-415
               

               
Cow position:
               
chr18:29390241-29390019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
187-315
               

               
Cow position:
               
chr18:45985669-45985541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
189-408
               

               
Cow position:
               
chr18:23648880-23649114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
190-402
               

               
Cow position:
               
chr18:11672002-11672231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
191-405
               

               
Cow position:
               
chr18:35827413-35827196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
191-419
               

               
Cow position:
               
chr18:2794011-2793779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
194-404
               

               
Cow position:
               
chr18:48407702-48407913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
40, 169
               

               
Conread position:
               
196-409
               

               
Cow position:
               
chr18:41724853-41724628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
197-405
               

               
Cow position:
               
chr18:31159307-31159089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 162
               

               
Conread position:
               
198-403
               

               
Cow position:
               
chr18:47802123-47801918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
166, 59
               

               
Conread position:
               
198-414
               

               
Cow position:
               
chr18:41702804-41703025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
132, 35
               

               
Conread position:
               
200-421
               

               
Cow position:
               
chr18:33756990-33757214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
201-390
               

               
Cow position:
               
chr18:28322627-28322819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
201-415
               

               
Cow position:
               
chr18:35582068-35581861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
32, 108
               

               
Conread position:
               
202-393
               

               
Cow position:
               
chr18:34444762-34444567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
104, 31
               

               
Conread position:
               
203-393
               

               
Cow position:
               
chr18:49603071-49602872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
206-393
               

               
Cow position:
               
chr18:8208450-8208252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
206-405
               

               
Cow position:
               
chr18:47872016-47872210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
206-411
               

               
Cow position:
               
chr18:2108222-2108437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
208-420
               

               
Cow position:
               
chr18:22045436-22045217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
209-362
               

               
Cow position:
               
chr18:43125064-43125213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
209-393
               

               
Cow position:
               
chr18:50004724-50004536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
209-409
               

               
Cow position:
               
chr18:4485585-4485779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
108, 23
               

               
Conread position:
               
209-419
               

               
Cow position:
               
chr18:21751356-21751574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 191
               

               
Conread position:
               
210-393
               

               
Cow position:
               
chr18:19831565-19831745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
211-387
               

               
Cow position:
               
chr18:24022598-24022779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
212-389
               

               
Cow position:
               
chr18:55722482-55722666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
213-407
               

               
Cow position:
               
chr18:21187288-21187485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
215-421
               

               
Cow position:
               
chr18:17195361-17195146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
217-412
               

               
Cow position:
               
chr18:27637478-27637684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
217-419
               

               
Cow position:
               
chr18:9596169-9596370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
221-353
               

               
Cow position:
               
chr18:81962-82098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
222-398
               

               
Cow position:
               
chr18:55038960-55039118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
164, 11
               

               
Conread position:
               
223-419
               

               
Cow position:
               
chr18:16137288-16137080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
224-377
               

               
Cow position:
               
chr18:50018737-50018588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
225-386
               

               
Cow position:
               
chr18:21143970-21143805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
226-417
               

               
Cow position:
               
chr18:32290707-32290897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
227-421
               

               
Cow position:
               
chr18:21528643-21528848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
230-377
               

               
Cow position:
               
chr18:38228407-38228554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 78
               

               
Conread position:
               
230-390
               

               
Cow position:
               
chr18:44206084-44205927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
230-390
               

               
Cow position:
               
chr18:47096429-47096589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
84, 151
               

               
Conread position:
               
230-393
               

               
Cow position:
               
chr18:20057176-20057338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
230-397
               

               
Cow position:
               
chr18:49440841-49441017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
230-402
               

               
Cow position:
               
chr18:47419799-47419971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
233-416
               

               
Cow position:
               
chr18:50276240-50276049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
233-420
               

               
Cow position:
               
chr18:49127014-49126828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
234-411
               

               
Cow position:
               
chr18:21051079-21050902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
122, 77
               

               
Conread position:
               
235-392
               

               
Cow position:
               
chr18:12056675-12056525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
128, 18
               

               
Conread position:
               
235-421
               

               
Cow position:
               
chr18:43400710-43400527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
235-421
               

               
Cow position:
               
chr18:50263918-50263731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
236-378
               

               
Cow position:
               
chr18:44548740-44548591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
238-401
               

               
Cow position:
               
chr18:17007472-17007307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 113
               

               
Conread position:
               
243-411
               

               
Cow position:
               
chr18:18597070-18596903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 57
               

               
Conread position:
               
244-416
               

               
Cow position:
               
chr18:37690164-37690345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
244-418
               

               
Cow position:
               
chr18:4907161-4907336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
253-417
               

               
Cow position:
               
chr18:56361359-56361192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
257-413
               

               
Cow position:
               
chr18:37804666-37804820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 70
               

               
Conread position:
               
260-402
               

               
Cow position:
               
chr18:11814334-11814478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
261-397
               

               
Cow position:
               
chr18:18520770-18520627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               
Show alignments to all cow chromosomes.