• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rcmu37_n4.y1
        

               
Conread position:
               
1-113
               

               
Cow position:
               
chr22:33985963-33985847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr22:15292893-15292769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr22:34930945-34930809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr22:27701016-27701156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr22:31194876-31195021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr22:11200840-11200984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr22:11987414-11987266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr22:16235848-16235697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr22:21905297-21905449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr22:3944977-3945135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-157
               

               
Cow position:
               
chr22:2945869-2945712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr22:5042123-5042279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr22:4026410-4026572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr22:1791791-1791959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr22:30472849-30473017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr22:2141617-2141781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr22:30689434-30689621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr22:1081306-1081491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 143
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr22:12974590-12974397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr22:26106861-26107055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr22:29256512-29256308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 100
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:9734658-9734858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
192, 45
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:10403693-10403498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr22:14816622-14816425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr22:45271384-45271592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
31, 173
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr22:25341823-25342026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
76, 131
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr22:6360685-6360475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr22:1601986-1602202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 153
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr22:6202716-6202928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr22:11500581-11500793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr22:13950976-13951197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 159
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr22:4974617-4974405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:16057504-16057726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr22:23865264-23865494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr22:26490264-26490497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr22:10585898-10585673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr22:30954842-30955065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
230, 53
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr22:25629968-25629721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
15, 175
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:30710195-30710455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr22:29013680-29013941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr22:10983147-10983413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr22:10598200-10598455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 150
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr22:30963934-30964198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 21
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr22:34476198-34475930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
79, 12
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr22:38930711-38930437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr22:7838408-7838661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr22:34398652-34398384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 32
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr22:31213376-31213652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 145
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr22:39293944-39293670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 132
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr22:47741219-47741494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr22:13849647-13849378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
36, 134
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr22:31593058-31592778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr22:11257933-11257666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
7, 85
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr22:16650400-16650115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr22:37324349-37324626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 75
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr22:3367000-3367282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 25
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr22:3269676-3269387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
42, 72
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr22:9520949-9521245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
164, 96
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:1609953-1609671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:3964988-3965288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:8840388-8840707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:11458627-11458917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:12968267-12967967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:13840940-13841241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:17295128-17294834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:28058241-28057948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:30515055-30515360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 0
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:34712517-34712827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:38980707-38980988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr22:44180396-44180695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr22:10632718-10633017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr22:17764180-17764482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 164
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr22:845705-846007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 106
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr22:1975415-1975712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 167
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr22:2148376-2148672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr22:13861390-13861680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 118
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr22:26141075-26141378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 165
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr22:15090543-15090847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr22:46610978-46610676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
44, 98
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr22:5282310-5282605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr22:7851762-7852072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 148
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr22:8481450-8481752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 51
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr22:15337917-15338219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 165
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr22:34606392-34606698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr22:43743527-43743237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
231, 42
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr22:27274890-27274589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr22:21295923-21295612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 58
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr22:26316276-26316569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr22:38107499-38107795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
98, 129
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr22:23856851-23857161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 128
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr22:43119926-43119615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 157
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:1279586-1279270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 156
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:2502640-2502941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:3950044-3950367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 176
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:4017278-4017588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 161
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:10420834-10421148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 120
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:14924926-14924617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
36, 41
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:17125385-17125698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 55
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:21502542-21502859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:22155403-22155718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:26658858-26659156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:27329081-27328778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
233, 45
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:30049770-30049451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 165
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr22:41137118-41137434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
112, 209
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr22:8116279-8115960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
232, 31
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr22:10920061-10919729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
39, 185
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr22:27431880-27431583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 62
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr22:24611273-24610964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 30
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr22:27047597-27047277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr22:45513718-45513391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr22:15039382-15039036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr22:3908721-3909091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
41, 178
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr22:46568086-46567719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr22:28146487-28146864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 102
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr22:30483715-30484086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 165
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr22:14378881-14378508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
28, 109
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr22:17126258-17126631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr22:10532297-10532683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 162
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr22:14245622-14245247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
161, 30
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr22:27223936-27224299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
232, 49
               

               
Conread position:
               
1-385
               

               
Cow position:
               
chr22:20626644-20627025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 114
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr22:5467566-5467172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr22:8418271-8418659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 18
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr22:41829427-41829040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr22:2523765-2524146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr22:13286247-13286644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 233
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr22:19787877-19787505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr22:40349153-40349537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 104
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr22:2623712-2623308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 30
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr22:9977622-9977991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr22:13735462-13735083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr22:30698982-30699363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 101
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr22:41853699-41854101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
77, 133
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr22:43397820-43398198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 44
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:534296-534689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 165
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:644958-644581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:3325384-3325787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:4535524-4535121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:14179029-14178632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 168
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:14371970-14372367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
61, 160
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:17950154-17949777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 34
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:27581248-27581625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:31646297-31646681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 42
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:38940146-38939750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 254
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:40048366-40048758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:40374409-40374806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 166
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:41898646-41898250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:41982912-41982523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 110
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:42612260-42612641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 74
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:42684703-42685082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr22:45132849-45132450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr22:9127205-9127599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 188
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr22:14844373-14844747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr22:27171455-27171067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr22:3533749-3534134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 40
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr22:23181233-23180842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr22:30094048-30094446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 103
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr22:30269216-30269607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 101
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr22:6215751-6215351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 9
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr22:46351583-46351189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr22:25743149-25742761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 133
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr22:28071357-28071765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr22:29641913-29642321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr22:37029799-37029398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 42
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr22:6610551-6610153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 101
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr22:13957847-13957437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:1651315-1651698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
161, 31
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:3987315-3987731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:4356902-4357293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 15
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:8412327-8412737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 170
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:8429685-8430102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
40, 48
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:10947462-10947060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
164, 18
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:13866448-13866877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
79, 184
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:22022689-22023110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
41, 130
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:23689404-23688993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:26134432-26134009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
43, 182
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:41971354-41970949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr22:43812615-43812233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 16
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr22:3842430-3842827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr22:4043736-4044133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr22:8733520-8733134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 31
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr22:5616102-5616507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr22:21012193-21012596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 117
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr22:6493973-6494387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 109
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr22:2470444-2470027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr22:10302813-10303229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 180
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr22:12313222-12313633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 181
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr22:16532883-16533283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 66
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr22:19341002-19341406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 155
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr22:22907996-22908382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr22:34894775-34895170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr22:3960490-3960084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 189
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr22:7882353-7882770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 110
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr22:25246712-25247122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 107
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr22:37201659-37202059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr22:6754451-6754048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
85, 140
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr22:36193664-36194044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
233, 30
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr22:36539870-36539441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr22:10685285-10684886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 141
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr22:11697405-11696977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 184
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr22:14366151-14365739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 100
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr22:25943284-25943677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr22:32661315-32661725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr22:4108936-4108508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
82, 131
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr22:22612915-22613316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 49
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:6149583-6149172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 126
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:10294853-10295243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 44
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:12681990-12681587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr22:41245048-41245466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
213, 265
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr22:37145150-37145536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr22:5016311-5016710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
44, 140
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr22:23833098-23833503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 38
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr22:26151317-26150899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 100
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr22:27577536-27577965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
44, 168
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr22:1309925-1309519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 150
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr22:8882827-8883232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 39
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr22:18196312-18196729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr22:39472573-39472135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
196, 165
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr22:27818806-27819219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:10122191-10122591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr22:25222100-25221679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 236
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr22:32892498-32892919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 103
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr22:4990369-4989938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
39, 166
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr22:14091429-14090992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
69, 154
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr22:16620976-16621403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr22:18838053-18838475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 42
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr22:34441832-34441408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 72
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr22:22861109-22860688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 166
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:7153693-7154103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
63, 33
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:8324048-8324475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 114
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:23136740-23136308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 98
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:23759209-23758779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr22:30119022-30119474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
77, 120
               

               
Conread position:
               
2-114
               

               
Cow position:
               
chr22:8357418-8357530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-148
               

               
Cow position:
               
chr22:21526788-21526642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-165
               

               
Cow position:
               
chr22:13016990-13016826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 107
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr22:19848593-19848417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr22:45685229-45685024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr22:2702032-2702241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
40, 131
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr22:30712555-30712770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
41, 180
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr22:12777779-12777577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr22:36569738-36569533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr22:6123092-6122877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr22:13011473-13011219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr22:10678181-10677937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr22:34597734-34597986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr22:26097810-26097559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 22
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr22:39303203-39302938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 166
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr22:5675368-5675119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
229, 39
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr22:14882306-14882050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr22:911906-912165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 29
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr22:3993414-3993678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 156
               

               
Conread position:
               
2-272
               

               
Cow position:
               
chr22:17993226-17992959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 16
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr22:12946361-12946081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr22:40720484-40720193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr22:4645581-4645877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 29
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr22:13300213-13300518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 133
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr22:10314881-10315184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 39
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr22:34750481-34750781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 129
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr22:17814032-17814341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 31
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr22:21530547-21530248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr22:21355341-21355028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 158
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr22:3316932-3317236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr22:2216628-2216924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr22:34616113-34616422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
176, 18
               

               
Conread position:
               
2-321
               

               
Cow position:
               
chr22:5337794-5337480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr22:16053116-16053428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr22:1590824-1591177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr22:29290333-29289983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 109
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr22:13670366-13669981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
2-386
               

               
Cow position:
               
chr22:23805178-23804792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
153, 270
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr22:34726476-34726869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 95
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr22:8398011-8397649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 130
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr22:11370787-11370396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr22:17852819-17852442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 41
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr22:5384459-5384834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
162, 32
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr22:8138454-8138055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 111
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr22:11613224-11613626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 162
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr22:12315615-12316008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 160
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr22:19653181-19652790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
164, 187
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr22:26184358-26183982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 165
               

               
Conread position:
               
2-393
               

               
Cow position:
               
chr22:27322129-27322498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr22:28370750-28371132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr22:38439354-38438957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 102
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr22:4372845-4373237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr22:26166811-26166414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 22
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr22:44740907-44741278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 39
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr22:11130675-11131075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 32
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr22:2403676-2404093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 253
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr22:5290647-5291071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr22:15950573-15950172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 20
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr22:27825640-27826065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr22:30998701-30999106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 127
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr22:11146706-11147126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 269
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr22:25237337-25236911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr22:28640350-28639938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr22:12800467-12800895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr22:14143302-14142907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
314, 22
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr22:25476867-25477249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
231, 82
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr22:864714-864312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 161
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr22:4076095-4075667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 177
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr22:6721263-6720865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 41
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr22:7967501-7967917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 227
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr22:15490463-15490869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 109
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr22:37139250-37139645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr22:36633035-36633419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 24
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr22:38977653-38978066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
231, 24
               

               
Conread position:
               
2-416
               

               
Cow position:
               
chr22:15568214-15567803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 91
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr22:24066430-24066022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 96
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr22:41045110-41044683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chr22:8877076-8877474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr22:1326221-1326648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr22:43788325-43787911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
3-118
               

               
Cow position:
               
chr22:19714731-19714844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
3-148
               

               
Cow position:
               
chr22:44386596-44386456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
3-179
               

               
Cow position:
               
chr22:7252843-7252663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
40, 163
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr22:1822070-1821866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 165
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr22:2010604-2010839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
3-252
               

               
Cow position:
               
chr22:1640504-1640248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 174
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr22:16812358-16812091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
78, 99
               

               
Conread position:
               
3-283
               

               
Cow position:
               
chr22:1484667-1484946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
3-288
               

               
Cow position:
               
chr22:43292096-43291814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 163
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr22:21408017-21408321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr22:27550160-27550454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 158
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr22:27835343-27835643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr22:9335478-9335177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr22:28351851-28351556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
3-313
               

               
Cow position:
               
chr22:23122221-23121889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
34, 182
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr22:23176640-23176325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
3-353
               

               
Cow position:
               
chr22:1068111-1067756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 159
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr22:4119763-4119401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr22:15025299-15024943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 28
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr22:10631177-10631572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 175
               

               
Conread position:
               
3-380
               

               
Cow position:
               
chr22:2913083-2913445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
3-383
               

               
Cow position:
               
chr22:1848869-1849265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
3-385
               

               
Cow position:
               
chr22:10937028-10936657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 119
               

               
Conread position:
               
3-385
               

               
Cow position:
               
chr22:25361295-25361669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 47
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr22:14691171-14690763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 148
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr22:28356840-28357223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 143
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr22:1986814-1987170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
360, 40
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr22:21890555-21890167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr22:44717515-44717922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
3-401
               

               
Cow position:
               
chr22:44410541-44410924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
229, 40
               

               
Conread position:
               
3-402
               

               
Cow position:
               
chr22:4994116-4993706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 180
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr22:18021220-18020822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr22:1289714-1289318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr22:7081830-7082241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
40, 123
               

               
Conread position:
               
3-408
               

               
Cow position:
               
chr22:10339308-10338892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 108
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr22:26786158-26786574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr22:40121073-40120649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr22:3251186-3250753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 50
               

               
Conread position:
               
4-171
               

               
Cow position:
               
chr22:9251207-9251042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 92
               

               
Conread position:
               
4-176
               

               
Cow position:
               
chr22:4337910-4338086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 156
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr22:27512357-27512145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
4-219
               

               
Cow position:
               
chr22:22146032-22146251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 171
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr22:295131-294903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
41, 140
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr22:4650987-4651239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
4-270
               

               
Cow position:
               
chr22:15068231-15068497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
38, 31
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr22:6960674-6960927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
226, 24
               

               
Conread position:
               
4-289
               

               
Cow position:
               
chr22:22160526-22160815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 162
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr22:7884797-7885082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 66
               

               
Conread position:
               
4-302
               

               
Cow position:
               
chr22:23403835-23403540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr22:19775620-19775326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 51
               

               
Conread position:
               
4-315
               

               
Cow position:
               
chr22:47927566-47927856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr22:11600840-11601231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 127
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr22:40071777-40072158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 110
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr22:26339566-26339963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 30
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr22:6327970-6327574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr22:8732752-8732364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
47, 123
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr22:33949196-33948777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
4-401
               

               
Cow position:
               
chr22:24584237-24583864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
4-402
               

               
Cow position:
               
chr22:4563168-4563565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 59
               

               
Conread position:
               
4-402
               

               
Cow position:
               
chr22:6709972-6709581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
4-402
               

               
Cow position:
               
chr22:12573009-12573414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 209
               

               
Conread position:
               
4-402
               

               
Cow position:
               
chr22:18259034-18259425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 27
               

               
Conread position:
               
4-411
               

               
Cow position:
               
chr22:23115499-23115090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 123
               

               
Conread position:
               
4-416
               

               
Cow position:
               
chr22:7164758-7165195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 169
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr22:16273436-16273867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
40, 156
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chr22:30136629-30137077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 117
               

               
Conread position:
               
5-126
               

               
Cow position:
               
chr22:11489344-11489461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
5-261
               

               
Cow position:
               
chr22:13187687-13187943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
99, 118
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr22:22997286-22997566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
227, 44
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr22:877318-877617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
5-314
               

               
Cow position:
               
chr22:2627377-2627694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
5-385
               

               
Cow position:
               
chr22:12803578-12803196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 78
               

               
Conread position:
               
5-419
               

               
Cow position:
               
chr22:18926158-18926584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr22:9372323-9372755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr22:47582714-47582925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
6-284
               

               
Cow position:
               
chr22:14118782-14119060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
6-301
               

               
Cow position:
               
chr22:24734502-24734217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr22:29955193-29954818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr22:17152485-17152887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 120
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr22:21746447-21746844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
6-401
               

               
Cow position:
               
chr22:39508228-39507831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 24
               

               
Conread position:
               
6-402
               

               
Cow position:
               
chr22:32326607-32327009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
6-404
               

               
Cow position:
               
chr22:1654390-1653975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 44
               

               
Conread position:
               
6-416
               

               
Cow position:
               
chr22:6622438-6622028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 150
               

               
Conread position:
               
6-417
               

               
Cow position:
               
chr22:15618421-15618834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 151
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr22:35753498-35753202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
7-410
               

               
Cow position:
               
chr22:10161770-10162185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 115
               

               
Conread position:
               
8-179
               

               
Cow position:
               
chr22:8446745-8446917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
8-291
               

               
Cow position:
               
chr22:15358049-15358335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 140
               

               
Conread position:
               
8-412
               

               
Cow position:
               
chr22:4583365-4583782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 222
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr22:590146-590501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 125
               

               
Conread position:
               
9-413
               

               
Cow position:
               
chr22:39696099-39696516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
10-176
               

               
Cow position:
               
chr22:33918087-33917920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
83, 56
               

               
Conread position:
               
10-223
               

               
Cow position:
               
chr22:15020591-15020376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
13, 152
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr22:42605440-42605703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr22:15398766-15398471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
102, 166
               

               
Conread position:
               
10-314
               

               
Cow position:
               
chr22:16044613-16044302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 163
               

               
Conread position:
               
10-322
               

               
Cow position:
               
chr22:7302031-7301716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
10-383
               

               
Cow position:
               
chr22:10981198-10981575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr22:36433158-36432750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
10-420
               

               
Cow position:
               
chr22:5837079-5837494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 160
               

               
Conread position:
               
11-153
               

               
Cow position:
               
chr22:3541907-3541767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 38
               

               
Conread position:
               
11-190
               

               
Cow position:
               
chr22:1342548-1342727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
172, 150
               

               
Conread position:
               
11-241
               

               
Cow position:
               
chr22:27291910-27292129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
202, 30
               

               
Conread position:
               
11-254
               

               
Cow position:
               
chr22:8303038-8302791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
11-402
               

               
Cow position:
               
chr22:4061133-4060739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 155
               

               
Conread position:
               
12-231
               

               
Cow position:
               
chr22:41271186-41270971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
12-390
               

               
Cow position:
               
chr22:33485793-33485428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
12-421
               

               
Cow position:
               
chr22:16292107-16291706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
13-273
               

               
Cow position:
               
chr22:32513573-32513306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 144
               

               
Conread position:
               
13-416
               

               
Cow position:
               
chr22:21567812-21568216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
14-417
               

               
Cow position:
               
chr22:32895035-32895438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
235, 19
               

               
Conread position:
               
15-401
               

               
Cow position:
               
chr22:16095082-16094698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
18-254
               

               
Cow position:
               
chr22:11746082-11745850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
165, 6
               

               
Conread position:
               
18-260
               

               
Cow position:
               
chr22:15753186-15753444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 161
               

               
Conread position:
               
19-231
               

               
Cow position:
               
chr22:15959949-15959737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr22:33386682-33386402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
158, 7
               

               
Conread position:
               
19-394
               

               
Cow position:
               
chr22:12388913-12389303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
19-397
               

               
Cow position:
               
chr22:11778789-11778421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
85, 5
               

               
Conread position:
               
19-414
               

               
Cow position:
               
chr22:43131728-43131326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
20-405
               

               
Cow position:
               
chr22:16251741-16251352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 33
               

               
Conread position:
               
21-394
               

               
Cow position:
               
chr22:10567881-10567516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 44
               

               
Conread position:
               
22-274
               

               
Cow position:
               
chr22:26041419-26041676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
23-263
               

               
Cow position:
               
chr22:17132585-17132347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
23-392
               

               
Cow position:
               
chr22:16822928-16823316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
224, 138
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr22:28731501-28731687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
24-302
               

               
Cow position:
               
chr22:13769300-13769579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
194, 75
               

               
Conread position:
               
24-415
               

               
Cow position:
               
chr22:37030694-37030302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
25-266
               

               
Cow position:
               
chr22:6574565-6574811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
25-402
               

               
Cow position:
               
chr22:27635306-27635688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
170, 16
               

               
Conread position:
               
27-301
               

               
Cow position:
               
chr22:24628821-24628557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 135
               

               
Conread position:
               
27-315
               

               
Cow position:
               
chr22:24176054-24175781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
27-322
               

               
Cow position:
               
chr22:32651327-32651614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
53, 140
               

               
Conread position:
               
27-404
               

               
Cow position:
               
chr22:10292794-10293145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
27-407
               

               
Cow position:
               
chr22:6097198-6096801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 119
               

               
Conread position:
               
27-420
               

               
Cow position:
               
chr22:20862929-20862535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
28-258
               

               
Cow position:
               
chr22:23854802-23855031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
31-417
               

               
Cow position:
               
chr22:139470-139106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
50, 8
               

               
Conread position:
               
32-275
               

               
Cow position:
               
chr22:3241862-3241628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
33-388
               

               
Cow position:
               
chr22:19047985-19047637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 212
               

               
Conread position:
               
34-301
               

               
Cow position:
               
chr22:14638644-14638376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 12
               

               
Conread position:
               
34-302
               

               
Cow position:
               
chr22:26969618-26969891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
49, 107
               

               
Conread position:
               
34-314
               

               
Cow position:
               
chr22:19173537-19173816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 7
               

               
Conread position:
               
34-386
               

               
Cow position:
               
chr22:32480643-32480274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 88
               

               
Conread position:
               
34-405
               

               
Cow position:
               
chr22:32698596-32698973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
34-405
               

               
Cow position:
               
chr22:45796179-45796556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 64
               

               
Conread position:
               
34-419
               

               
Cow position:
               
chr22:4157239-4156854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
35-413
               

               
Cow position:
               
chr22:10416052-10416444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 138
               

               
Conread position:
               
35-421
               

               
Cow position:
               
chr22:33399644-33399262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 68
               

               
Conread position:
               
36-416
               

               
Cow position:
               
chr22:3315949-3316314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
291, 98
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr22:28665124-28665391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 125
               

               
Conread position:
               
37-315
               

               
Cow position:
               
chr22:32189009-32188739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
37-325
               

               
Cow position:
               
chr22:1266091-1265800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
43, 248
               

               
Conread position:
               
37-389
               

               
Cow position:
               
chr22:30818050-30818405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 74
               

               
Conread position:
               
38-402
               

               
Cow position:
               
chr22:3566016-3566377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
293, 122
               

               
Conread position:
               
39-298
               

               
Cow position:
               
chr22:9283757-9283500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 33
               

               
Conread position:
               
39-402
               

               
Cow position:
               
chr22:27729895-27730249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
192, 22
               

               
Conread position:
               
39-415
               

               
Cow position:
               
chr22:15153838-15154226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
39-416
               

               
Cow position:
               
chr22:33448243-33447855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 130
               

               
Conread position:
               
39-421
               

               
Cow position:
               
chr22:18167665-18168032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
40-411
               

               
Cow position:
               
chr22:9668407-9668803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
43, 251
               

               
Conread position:
               
41-261
               

               
Cow position:
               
chr22:1874536-1874754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 70
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr22:45845989-45846253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
192, 109
               

               
Conread position:
               
42-312
               

               
Cow position:
               
chr22:2912738-2912477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
42-402
               

               
Cow position:
               
chr22:42635587-42635220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
43-314
               

               
Cow position:
               
chr22:1563405-1563139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
43-400
               

               
Cow position:
               
chr22:15977360-15977685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
45-383
               

               
Cow position:
               
chr22:45807687-45808019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 109
               

               
Conread position:
               
46-284
               

               
Cow position:
               
chr22:41495824-41496056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
46-314
               

               
Cow position:
               
chr22:31510520-31510264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 102
               

               
Conread position:
               
49-164
               

               
Cow position:
               
chr22:14381252-14381368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
49-239
               

               
Cow position:
               
chr22:22553384-22553201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 79
               

               
Conread position:
               
49-250
               

               
Cow position:
               
chr22:226601-226404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
183, 79
               

               
Conread position:
               
49-393
               

               
Cow position:
               
chr22:13093338-13092992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
50-302
               

               
Cow position:
               
chr22:27740744-27740992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
50-389
               

               
Cow position:
               
chr22:15668622-15668286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 176
               

               
Conread position:
               
50-412
               

               
Cow position:
               
chr22:36132650-36133018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 85
               

               
Conread position:
               
50-419
               

               
Cow position:
               
chr22:530726-530351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
51-222
               

               
Cow position:
               
chr22:26506871-26506703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 44
               

               
Conread position:
               
51-389
               

               
Cow position:
               
chr22:8090675-8090339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 113
               

               
Conread position:
               
53-358
               

               
Cow position:
               
chr22:17224809-17224506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 45
               

               
Conread position:
               
53-418
               

               
Cow position:
               
chr22:40789424-40789780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 72
               

               
Conread position:
               
55-225
               

               
Cow position:
               
chr22:27267397-27267565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
55-377
               

               
Cow position:
               
chr22:27066247-27066567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
14, 143
               

               
Conread position:
               
55-421
               

               
Cow position:
               
chr22:11767193-11766823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
56-259
               

               
Cow position:
               
chr22:45019978-45019785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
56-402
               

               
Cow position:
               
chr22:34735726-34736057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 50
               

               
Conread position:
               
57-263
               

               
Cow position:
               
chr22:21325875-21325670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
57-307
               

               
Cow position:
               
chr22:31153815-31154062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
164, 69
               

               
Conread position:
               
57-393
               

               
Cow position:
               
chr22:34631996-34632351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 68
               
UCSC Genome Browser

               
Conread position:
               
58-302
               

               
Cow position:
               
chr22:21393459-21393211 (view  custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
172, 102
               
UCSC Genome Browser

               
               
               
Conread position:
61-274

               
               
               
Cow position:
chr22:17193250-17193464 (view  custom track)

               
               
               
Alignm length:
218

               
               
               
Alignm identity:
154

               
               
               
Alignm E-value:
1e-28

               
               
               
Alignm gaps (pig, cow):
28, 103
UCSC Genome Browser

               
               
               
Conread position:
61-414

               
               
               
Cow position:
chr22:27681578-27681942 (view  custom track)

               
               
               
Alignm length:
370

               
               
               
Alignm identity:
260

               
               
               
Alignm E-value:
0

               
               
               
Alignm gaps (pig, cow):
23, 93

               
               
               Conread position:62-393
               
               
               Cow position:chr22:27828247-27828578 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:341
               
               
               Alignm identity:229
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):26, 93

               
               
               Conread position:62-400
               
               
               Cow position:chr22:616985-617328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:250
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):70, 100

               
               
               Conread position:62-402
               
               
               Cow position:chr22:31599314-31599640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:349
               
               
               Alignm identity:246
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):255, 35

               
               
               Conread position:63-401
               
               
               Cow position:chr22:1983721-1984067 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:256
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):163, 26

               
               
               Conread position:64-402
               
               
               Cow position:chr22:12929411-12929068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:354
               
               
               Alignm identity:251
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):7, 93

               
               
               Conread position:66-385
               
               
               Cow position:chr22:19827997-19827669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:246
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):32, 74

               
               
               Conread position:68-308
               
               
               Cow position:chr22:12341064-12341304 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:190
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 99

               
               
               Conread position:70-270
               
               
               Cow position:chr22:15731072-15731264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:151
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):163, 80

               
               
               Conread position:70-304
               
               
               Cow position:chr22:25387196-25387431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:194
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):97, 30

               
               
               Conread position:73-362
               
               
               Cow position:chr22:4541816-4542098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):16, 71

               
               
               Conread position:76-308
               
               
               Cow position:chr22:12527247-12527014 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:177
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):66, 114

               
               
               Conread position:76-383
               
               
               Cow position:chr22:10609232-10609548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:227
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):94, 202

               
               
               Conread position:77-250
               
               
               Cow position:chr22:45578843-45579017 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):142, 84

               
               
               Conread position:77-274
               
               
               Cow position:chr22:27619608-27619808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:146
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:77-310
               
               
               Cow position:chr22:4011063-4011296 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:187
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):154, 73

               
               
               Conread position:77-404
               
               
               Cow position:chr22:43237528-43237200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:244
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):159, 81

               
               
               Conread position:77-411
               
               
               Cow position:chr22:2123174-2123512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:232
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):156, 84

               
               
               Conread position:77-420
               
               
               Cow position:chr22:39602159-39602508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:357
               
               
               Alignm identity:245
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):12, 31

               
               
               Conread position:78-311
               
               
               Cow position:chr22:6936145-6936367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:171
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:79-415
               
               
               Cow position:chr22:22013632-22013971 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:344
               
               
               Alignm identity:231
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):158, 41

               
               
               Conread position:80-419
               
               
               Cow position:chr22:13094280-13094610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:345
               
               
               Alignm identity:230
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):111, 56

               
               
               Conread position:81-385
               
               
               Cow position:chr22:898730-899030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:222
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):89, 17

               
               
               Conread position:81-402
               
               
               Cow position:chr22:38320795-38320498 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):150, 69

               
               
               Conread position:82-385
               
               
               Cow position:chr22:12892482-12892169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:224
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):83, 24

               
               
               Conread position:83-395
               
               
               Cow position:chr22:6852698-6852377 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:226
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):70, 98

               
               
               Conread position:83-396
               
               
               Cow position:chr22:13891454-13891778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:234
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):21, 36

               
               
               Conread position:84-404
               
               
               Cow position:chr22:1105949-1106283 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:220
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):75, 15

               
               
               Conread position:85-407
               
               
               Cow position:chr22:37947610-37947935 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:243
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):143, 81

               
               
               Conread position:87-397
               
               
               Cow position:chr22:23736122-23735808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:228
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):217, 32

               
               
               Conread position:87-407
               
               
               Cow position:chr22:12830554-12830233 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:221
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):132, 74

               
               
               Conread position:87-421
               
               
               Cow position:chr22:1870990-1871316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:242
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):144, 41

               
               
               Conread position:89-393
               
               
               Cow position:chr22:39215725-39215412 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:217
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):118, 72

               
               
               Conread position:89-405
               
               
               Cow position:chr22:33522974-33522664 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:227
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):115, 17

               
               
               Conread position:90-412
               
               
               Cow position:chr22:285467-285148 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:230
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):144, 51

               
               
               Conread position:92-302
               
               
               Cow position:chr22:13222006-13222219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:164
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):133, 0

               
               
               Conread position:95-302
               
               
               Cow position:chr22:10669577-10669372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:160
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):92, 34

               
               
               Conread position:95-362
               
               
               Cow position:chr22:9597683-9597419 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:193
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):116, 72

               
               
               Conread position:96-337
               
               
               Cow position:chr22:29185708-29185476 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:172
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:97-304
               
               
               Cow position:chr22:24336427-24336631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):143, 12

               
               
               Conread position:99-270
               
               
               Cow position:chr22:28290019-28290188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:127
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):10, 63

               
               
               Conread position:100-315
               
               
               Cow position:chr22:34104773-34104557 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:173
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):131, 0

               
               
               Conread position:102-419
               
               
               Cow position:chr22:33098506-33098165 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:343
               
               
               Alignm identity:225
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):55, 192

               
               
               Conread position:103-416
               
               
               Cow position:chr22:17652338-17652657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:248
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):131, 64

               
               
               Conread position:103-419
               
               
               Cow position:chr22:1659067-1659394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):128, 25

               
               
               Conread position:104-280
               
               
               Cow position:chr22:41979937-41979766 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:142
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):129, 26

               
               
               Conread position:104-402
               
               
               Cow position:chr22:27275370-27275676 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:210
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):130, 25

               
               
               Conread position:105-419
               
               
               Cow position:chr22:14006088-14006389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:215
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):8, 57

               
               
               Conread position:106-300
               
               
               Cow position:chr22:18293853-18293665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):127, 49

               
               
               Conread position:106-322
               
               
               Cow position:chr22:29389682-29389902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:148
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:106-393
               
               
               Cow position:chr22:24915745-24916031 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:208
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):88, 49

               
               
               Conread position:106-406
               
               
               Cow position:chr22:7140550-7140860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:217
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):71, 47

               
               
               Conread position:106-413
               
               
               Cow position:chr22:25254083-25254396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:218
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):127, 57

               
               
               Conread position:106-417
               
               
               Cow position:chr22:24903497-24903816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:247
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):128, 52

               
               
               Conread position:107-412
               
               
               Cow position:chr22:34618705-34619028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:216
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):124, 66

               
               
               Conread position:108-314
               
               
               Cow position:chr22:4315538-4315743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:159
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:109-274
               
               
               Cow position:chr22:43321259-43321424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:120
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):123, 91

               
               
               Conread position:109-393
               
               
               Cow position:chr22:25690370-25690078 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:207
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):108, 0

               
               
               Conread position:109-411
               
               
               Cow position:chr22:4533963-4533650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:210
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):107, 56

               
               
               Conread position:110-309
               
               
               Cow position:chr22:26122809-26123006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:148
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):121, 51

               
               
               Conread position:112-301
               
               
               Cow position:chr22:27907960-27907779 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):120, 53

               
               
               Conread position:112-409
               
               
               Cow position:chr22:12749985-12749695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:219
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):49, 19

               
               
               Conread position:112-418
               
               
               Cow position:chr22:12678506-12678195 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):122, 64

               
               
               Conread position:113-315
               
               
               Cow position:chr22:10553770-10553570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:158
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):121, 48

               
               
               Conread position:113-393
               
               
               Cow position:chr22:12981808-12981525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:207
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):204, 54

               
               
               Conread position:116-345
               
               
               Cow position:chr22:25846403-25846172 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):118, 37

               
               
               Conread position:116-392
               
               
               Cow position:chr22:21397987-21397717 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:198
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):116, 51

               
               
               Conread position:117-393
               
               
               Cow position:chr22:14214444-14214167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:209
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):116, 43

               
               
               Conread position:118-400
               
               
               Cow position:chr22:9171325-9171607 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):116, 246

               
               
               Conread position:120-322
               
               
               Cow position:chr22:10918649-10918451 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:146
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):185, 11

               
               
               Conread position:121-302
               
               
               Cow position:chr22:12686754-12686584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:182
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:121-314
               
               
               Cow position:chr22:1025810-1026004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:145
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):110, 52

               
               
               Conread position:121-411
               
               
               Cow position:chr22:42617921-42618214 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):113, 47

               
               
               Conread position:122-322
               
               
               Cow position:chr22:4137727-4137530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:156
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):112, 40

               
               
               Conread position:122-407
               
               
               Cow position:chr22:43965621-43965917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:203
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):84, 53

               
               
               Conread position:122-414
               
               
               Cow position:chr22:26017816-26017540 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:207
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):242, 43

               
               
               Conread position:123-420
               
               
               Cow position:chr22:12157918-12157622 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):108, 21

               
               
               Conread position:124-307
               
               
               Cow position:chr22:1249045-1248870 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:137
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):108, 36

               
               
               Conread position:125-392
               
               
               Cow position:chr22:26056943-26056668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:131-302
               
               
               Cow position:chr22:28704117-28704286 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):109, 37

               
               
               Conread position:131-393
               
               
               Cow position:chr22:1349756-1350027 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):105, 244

               
               
               Conread position:131-399
               
               
               Cow position:chr22:2109690-2109423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:205
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):101, 26

               
               
               Conread position:131-406
               
               
               Cow position:chr22:6176357-6176072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):35, 86

               
               
               Conread position:131-407
               
               
               Cow position:chr22:21526852-21527124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:210
               
               
               Alignm E-value:7.00649e-44
               
               
               Alignm gaps (pig, cow):103, 35

               
               
               Conread position:136-314
               
               
               Cow position:chr22:23440358-23440182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):108, 82

               
               
               Conread position:136-408
               
               
               Cow position:chr22:23249790-23249522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:209
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):97, 24

               
               
               Conread position:137-393
               
               
               Cow position:chr22:4054647-4054403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:198
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):226, 66

               
               
               Conread position:139-411
               
               
               Cow position:chr22:2076068-2075789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):95, 27

               
               
               Conread position:139-420
               
               
               Cow position:chr22:15737173-15737455 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):100, 34

               
               
               Conread position:140-409
               
               
               Cow position:chr22:3282883-3282613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):94, 124

               
               
               Conread position:140-419
               
               
               Cow position:chr22:1500831-1501107 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:215
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):80, 22

               
               
               Conread position:144-413
               
               
               Cow position:chr22:2101001-2100728 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:211
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):90, 18

               
               
               Conread position:147-406
               
               
               Cow position:chr22:243060-243315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:199
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):86, 19

               
               
               Conread position:151-414
               
               
               Cow position:chr22:7497157-7496885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):10, 27

               
               
               Conread position:152-411
               
               
               Cow position:chr22:33985848-33985588 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:204
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):194, 8

               
               
               Conread position:155-402
               
               
               Cow position:chr22:12902892-12902647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:198
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):161, 20

               
               
               Conread position:156-407
               
               
               Cow position:chr22:24134366-24134108 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):150, 12

               
               
               Conread position:156-411
               
               
               Cow position:chr22:32514247-32514512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:182
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):56, 12

               
               
               Conread position:159-393
               
               
               Cow position:chr22:26417241-26417480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:167
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):23, 9

               
               
               Conread position:162-318
               
               
               Cow position:chr22:23036125-23036282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:130
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):70, 0

               
               
               Conread position:162-397
               
               
               Cow position:chr22:23077531-23077271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:185
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):69, 0

               
               
               Conread position:162-413
               
               
               Cow position:chr22:4657082-4656823 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):71, 0

               
               
               Conread position:163-416
               
               
               Cow position:chr22:23372902-23372638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:188
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):71, 240

               
               
               Conread position:165-400
               
               
               Cow position:chr22:4163942-4164185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:193
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 58

               
               
               Conread position:166-393
               
               
               Cow position:chr22:5712553-5712784 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):68, 44

               
               
               Conread position:166-409
               
               
               Cow position:chr22:38115158-38115396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):103, 67

               
               
               Conread position:166-417
               
               
               Cow position:chr22:11344475-11344705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:181
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):64, 129

               
               
               Conread position:167-416
               
               
               Cow position:chr22:31195021-31195278 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):67, 237

               
               
               Conread position:167-421
               
               
               Cow position:chr22:12188514-12188246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:191
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):67, 29

               
               
               Conread position:167-421
               
               
               Cow position:chr22:12195601-12195332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:191
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):67, 29

               
               
               Conread position:168-304
               
               
               Cow position:chr22:1977716-1977853 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:116
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):68, 0

               
               
               Conread position:168-385
               
               
               Cow position:chr22:8287154-8287372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:153
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):153, 65

               
               
               Conread position:168-385
               
               
               Cow position:chr22:14141375-14141149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:167
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):66, 0

               
               
               Conread position:168-403
               
               
               Cow position:chr22:8357551-8357789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:178
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):50, 174

               
               
               Conread position:168-412
               
               
               Cow position:chr22:26803785-26804042 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:169-314
               
               
               Cow position:chr22:21421085-21421229 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:112
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):9, 62

               
               
               Conread position:169-315
               
               
               Cow position:chr22:23398436-23398289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:108
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:169-325
               
               
               Cow position:chr22:30253168-30253325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:125
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):65, 143

               
               
               Conread position:169-405
               
               
               Cow position:chr22:3227361-3227584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):65, 49

               
               
               Conread position:170-394
               
               
               Cow position:chr22:17198106-17198339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:170-397
               
               
               Cow position:chr22:39622521-39622731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):30, 0

               
               
               Conread position:170-419
               
               
               Cow position:chr22:10557249-10557497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:190
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):64, 52

               
               
               Conread position:171-384
               
               
               Cow position:chr22:16724717-16724497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:154
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):63, 0

               
               
               Conread position:171-421
               
               
               Cow position:chr22:24063060-24063333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:201
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):38, 81

               
               
               Conread position:175-307
               
               
               Cow position:chr22:12974194-12974063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:110
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):56, 43

               
               
               Conread position:175-410
               
               
               Cow position:chr22:1714891-1714645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:167
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):58, 227

               
               
               Conread position:175-411
               
               
               Cow position:chr22:11352478-11352227 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:174
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):60, 0

               
               
               Conread position:176-377
               
               
               Cow position:chr22:2643905-2644117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:150
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):61, 24

               
               
               Conread position:176-389
               
               
               Cow position:chr22:4735998-4736222 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:158
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:176-415
               
               
               Cow position:chr22:26112341-26112587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):123, 114

               
               
               Conread position:178-406
               
               
               Cow position:chr22:30687001-30687231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:162
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):21, 6

               
               
               Conread position:179-304
               
               
               Cow position:chr22:10323858-10323984 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:108
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):54, 0

               
               
               Conread position:179-402
               
               
               Cow position:chr22:21905450-21905677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:174
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):55, 16

               
               
               Conread position:182-322
               
               
               Cow position:chr22:4012500-4012637 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:113
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:182-393
               
               
               Cow position:chr22:23277336-23277538 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:154
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):51, 0

               
               
               Conread position:184-385
               
               
               Cow position:chr22:28493295-28493089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:152
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):53, 17

               
               
               Conread position:184-389
               
               
               Cow position:chr22:8446899-8447103 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:159
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):51, 35

               
               
               Conread position:184-421
               
               
               Cow position:chr22:14487918-14488168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:186-393
               
               
               Cow position:chr22:7584251-7584043 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:169
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):129, 47

               
               
               Conread position:186-396
               
               
               Cow position:chr22:16813783-16813998 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:173
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):48, 65

               
               
               Conread position:186-405
               
               
               Cow position:chr22:21483933-21484146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:160
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):120, 36

               
               
               Conread position:188-307
               
               
               Cow position:chr22:11389601-11389482 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:121
               
               
               Alignm identity:96
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):48, 11

               
               
               Conread position:188-389
               
               
               Cow position:chr22:23780581-23780377 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:144
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):44, 33

               
               
               Conread position:190-420
               
               
               Cow position:chr22:1821596-1821360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:171
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):44, 175

               
               
               Conread position:191-403
               
               
               Cow position:chr22:24071657-24071446 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:166
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):114, 42

               
               
               Conread position:191-404
               
               
               Cow position:chr22:9279017-9279232 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:154
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):83, 40

               
               
               Conread position:192-315
               
               
               Cow position:chr22:22606216-22606340 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:125
               
               
               Alignm identity:103
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:192-385
               
               
               Cow position:chr22:1523209-1523414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:152
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):43, 63

               
               
               Conread position:193-404
               
               
               Cow position:chr22:7086560-7086363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:162
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):170, 40

               
               
               Conread position:193-412
               
               
               Cow position:chr22:35902429-35902202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):41, 11

               
               
               Conread position:194-388
               
               
               Cow position:chr22:4628546-4628757 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:194-410
               
               
               Cow position:chr22:30615723-30615947 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):40, 207

               
               
               Conread position:194-412
               
               
               Cow position:chr22:8327739-8327958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):38, 67

               
               
               Conread position:196-387
               
               
               Cow position:chr22:6360189-6359999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:146
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):38, 109

               
               
               Conread position:198-415
               
               
               Cow position:chr22:35578781-35578553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):6, 0

               
               
               Conread position:199-397
               
               
               Cow position:chr22:1304556-1304351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:207
               
               
               Alignm identity:162
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):22, 83

               
               
               Conread position:199-418
               
               
               Cow position:chr22:45684040-45683809 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:167
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):38, 12

               
               
               Conread position:200-421
               
               
               Cow position:chr22:23630352-23630125 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:167
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):34, 61

               
               
               Conread position:201-304
               
               
               Cow position:chr22:2110451-2110553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:105
               
               
               Alignm identity:89
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):54, 32

               
               
               Conread position:201-409
               
               
               Cow position:chr22:45012753-45012546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:145
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):163, 32

               
               
               Conread position:201-414
               
               
               Cow position:chr22:26188870-26189091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):30, 201

               
               
               Conread position:202-307
               
               
               Cow position:chr22:28649718-28649612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:107
               
               
               Alignm identity:92
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:202-381
               
               
               Cow position:chr22:29134954-29135143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):17, 110

               
               
               Conread position:202-391
               
               
               Cow position:chr22:2184711-2184518 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:140
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):32, 0

               
               
               Conread position:202-397
               
               
               Cow position:chr22:27580412-27580221 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):112, 0

               
               
               Conread position:203-406
               
               
               Cow position:chr22:33373243-33373457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:156
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):30, 8

               
               
               Conread position:204-411
               
               
               Cow position:chr22:7518558-7518770 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:165
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):30, 193

               
               
               Conread position:206-321
               
               
               Cow position:chr22:14482528-14482413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:117
               
               
               Alignm identity:96
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):25, 62

               
               
               Conread position:206-413
               
               
               Cow position:chr22:20034834-20035039 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:149
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):27, 74

               
               
               Conread position:206-421
               
               
               Cow position:chr22:15695724-15695505 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:158
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):10, 109

               
               
               Conread position:207-421
               
               
               Cow position:chr22:37140410-37140625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:155
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):10, 151

               
               
               Conread position:210-396
               
               
               Cow position:chr22:10913675-10913861 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:190
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):25, 8

               
               
               Conread position:211-414
               
               
               Cow position:chr22:27401747-27401953 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):23, 185

               
               
               Conread position:211-415
               
               
               Cow position:chr22:1959246-1959461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:151
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):22, 0

               
               
               Conread position:212-324
               
               
               Cow position:chr22:5411854-5411966 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:114
               
               
               Alignm identity:93
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):19, 95

               
               
               Conread position:212-421
               
               
               Cow position:chr22:3257650-3257439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):105, 130

               
               
               Conread position:214-353
               
               
               Cow position:chr22:31308897-31309037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:108
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):22, 115

               
               
               Conread position:214-393
               
               
               Cow position:chr22:2704311-2704501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:135
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:214-411
               
               
               Cow position:chr22:38815186-38814983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:141
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):21, 0

               
               
               Conread position:214-419
               
               
               Cow position:chr22:11049330-11049536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:149
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):19, 77

               
               
               Conread position:215-402
               
               
               Cow position:chr22:3541104-3540911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:137
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:216-392
               
               
               Cow position:chr22:1384097-1384272 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):20, 95

               
               
               Conread position:217-401
               
               
               Cow position:chr22:9735285-9735474 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:160
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):17, 180

               
               
               Conread position:218-390
               
               
               Cow position:chr22:20472345-20472176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:177
               
               
               Alignm identity:132
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):16, 71

               
               
               Conread position:218-408
               
               
               Cow position:chr22:43730303-43730496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:135
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):99, 177

               
               
               Conread position:221-389
               
               
               Cow position:chr22:24890241-24890416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:132
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:221-390
               
               
               Cow position:chr22:3388762-3388925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:136
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):13, 5

               
               
               Conread position:221-393
               
               
               Cow position:chr22:17745833-17746019 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:187
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:222-402
               
               
               Cow position:chr22:13951284-13951471 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:141
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:224-408
               
               
               Cow position:chr22:2201763-2201949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:141
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):10, 93

               
               
               Conread position:225-362
               
               
               Cow position:chr22:16655714-16655573 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:142
               
               
               Alignm identity:113
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:228-402
               
               
               Cow position:chr22:24047584-24047412 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:179
               
               
               Alignm identity:135
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):5, 121

               
               
               Conread position:228-412
               
               
               Cow position:chr22:30684756-30684944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:189
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:230-389
               
               
               Cow position:chr22:12741242-12741086 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:165
               
               
               Alignm identity:127
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):109, 64

               
               
               Conread position:230-390
               
               
               Cow position:chr22:18145566-18145732 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:124
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:230-390
               
               
               Cow position:chr22:21042116-21041958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:124
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):16, 126

               
               
               Conread position:230-393
               
               
               Cow position:chr22:19548885-19549041 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:129
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):77, 0

               
               
               Conread position:230-400
               
               
               Cow position:chr22:4751114-4750931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:139
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):15, 135

               
               
               Conread position:230-409
               
               
               Cow position:chr22:1105594-1105415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:184
               
               
               Alignm identity:139
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):83, 62

               
               
               Conread position:230-415
               
               
               Cow position:chr22:9075437-9075630 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):76, 173

               
               
               Conread position:230-417
               
               
               Cow position:chr22:10594638-10594836 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:155
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):78, 0

               
               
               Conread position:232-395
               
               
               Cow position:chr22:14236863-14236701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:166
               
               
               Alignm identity:124
               
               
               Alignm E-value:9e-26
               
               
               Alignm gaps (pig, cow):80, 86

               
               
               Conread position:232-414
               
               
               Cow position:chr22:12637632-12637819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:139
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):85, 165

               
               
               Conread position:233-380
               
               
               Cow position:chr22:41636615-41636464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:115
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):110, 83

               
               
               Conread position:233-390
               
               
               Cow position:chr22:1074297-1074464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:168
               
               
               Alignm identity:126
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):88, 0

               
               
               Conread position:233-402
               
               
               Cow position:chr22:37702011-37702184 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:175
               
               
               Alignm identity:128
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):76, 131

               
               
               Conread position:233-403
               
               
               Cow position:chr22:26945527-26945360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:172
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):158, 77

               
               
               Conread position:233-414
               
               
               Cow position:chr22:33566061-33565879 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:185
               
               
               Alignm identity:136
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):83, 138

               
               
               Conread position:236-391
               
               
               Cow position:chr22:23762815-23762654 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:120
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):81, 0

               
               
               Conread position:238-393
               
               
               Cow position:chr22:12446679-12446531 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):72, 0

               
               
               Conread position:244-413
               
               
               Cow position:chr22:45019602-45019431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:131
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):61, 150

               
               
               Conread position:248-418
               
               
               Cow position:chr22:12586576-12586746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:173
               
               
               Alignm identity:131
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):138, 66

               
               
               Conread position:251-416
               
               
               Cow position:chr22:10966186-10966356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:126
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):65, 149

               
               
               Conread position:253-410
               
               
               Cow position:chr22:28803971-28804128 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:121
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):52, 64

               
               
               Conread position:257-402
               
               
               Cow position:chr22:29546696-29546846 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):59, 43
Show alignments to all cow chromosomes.