• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rcmu37_n4.y1
        

               
Conread position:
               
1-108
               

               
Cow position:
               
chr28:16879460-16879354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
1-112
               

               
Cow position:
               
chr28:8372282-8372397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr28:3161257-3161138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr28:20760112-20759984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr28:5188590-5188435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr28:11451655-11451494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr28:7684867-7684710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr28:19295549-19295383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr28:24996777-24996612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr28:8348841-8348669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr28:7590370-7590177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 161
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr28:7503650-7503850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr28:17029904-17029712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr28:19394442-19394627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr28:23840020-23840212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr28:27428564-27428759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr28:9390553-9390349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr28:15375014-15374809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr28:22170906-22170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr28:10478531-10478326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr28:4880452-4880246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
184, 69
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr28:5773451-5773654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr28:7980607-7980399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
42, 125
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr28:22739612-22739813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr28:24646352-24646561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 117
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr28:8682039-8681813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr28:7607039-7607268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 173
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr28:34082210-34081978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr28:25459337-25459568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr28:17288036-17288254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr28:25424491-25424256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr28:23775857-23776090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr28:5904547-5904787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr28:2738000-2737745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 165
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr28:7751489-7751239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr28:5771181-5771440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
171, 45
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr28:12946749-12947031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
29, 138
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr28:27313937-27313650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
43, 146
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr28:34442952-34442676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 161
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr28:17362771-17362510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
232, 15
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr28:25283016-25283286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
45, 10
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr28:23675955-23676241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 22
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr28:11786897-11786612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:7228574-7228284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr28:19080036-19079740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr28:10529671-10529381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 40
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr28:5366319-5366015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 134
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr28:11818149-11817855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 42
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr28:21380686-21380988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 172
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr28:31110194-31109895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 155
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:5128918-5128618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 114
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:13176867-13176579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:14512337-14512643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
160, 31
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:19222334-19222041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 85
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr28:20313086-20313387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr28:6971528-6971237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 32
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr28:8408550-8408847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 26
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr28:4841584-4841275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr28:8022299-8021988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr28:18591081-18591385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr28:34561170-34561458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 21
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr28:14933773-14934074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
42, 171
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr28:23621359-23621658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
232, 96
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr28:21355036-21355353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr28:25249167-25249476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 23
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr28:2898807-2899112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 155
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr28:24017815-24018111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr28:14234784-14235078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr28:18354507-18354209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr28:4188346-4188681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 27
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr28:7549251-7548929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr28:20963721-20963402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr28:29199538-29199860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr28:26533354-26533673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
44, 159
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr28:29434613-29434296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
37, 84
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr28:25596444-25596778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 110
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr28:16386694-16386360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr28:4138858-4138501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
114, 76
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr28:4938650-4938982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
230, 32
               

               
Conread position:
               
1-376
               

               
Cow position:
               
chr28:26743433-26743822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 47
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr28:3914521-3914897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 314
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr28:7268125-7267750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 14
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr28:33163656-33163274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 224
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr28:23007914-23007539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 26
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr28:10844930-10845306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 142
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr28:18934267-18934639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 101
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr28:23459956-23460348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
33, 150
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr28:9740283-9740665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr28:23724644-23724262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 143
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr28:5074693-5074313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 30
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr28:3144080-3143676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 244
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr28:12951244-12951625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
82, 33
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr28:25727189-25727577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 121
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr28:26719171-26719539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 9
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr28:3746013-3746409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 136
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr28:9285566-9285165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 244
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr28:31648885-31649277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr28:5931165-5931560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr28:3492972-3492567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 38
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr28:11426734-11426331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 164
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr28:23616214-23616623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
42, 166
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr28:1099830-1099460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 48
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr28:23410512-23410115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr28:21868263-21868677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 158
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr28:4884455-4884032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr28:5236791-5236377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr28:14657512-14657939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 127
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr28:21104036-21103598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 249
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr28:4158763-4159186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr28:16085136-16085531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr28:18790822-18791253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
1-407
               

               
Cow position:
               
chr28:34133675-34134072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 37
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr28:5144710-5144288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 109
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr28:20124597-20125004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 40
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr28:10606810-10606414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr28:21502206-21502605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 88
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr28:21844767-21845172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 119
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr28:10053527-10053104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr28:16204521-16204107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 159
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr28:34230041-34230456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 143
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr28:10669386-10669812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
63, 37
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr28:24343178-24343578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr28:7698171-7697751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr28:30303384-30302990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 121
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr28:30608370-30607970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
226, 83
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr28:34878161-34877745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
51, 163
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr28:9099747-9100154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr28:5817658-5818062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr28:1837802-1838225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr28:30293778-30293358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr28:8347546-8347964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr28:751036-751462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 159
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr28:24966204-24966622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 49
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr28:5826760-5827166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
77, 25
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr28:15263913-15263478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
43, 168
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr28:15272449-15272030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr28:26982935-26982501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 175
               

               
Conread position:
               
2-119
               

               
Cow position:
               
chr28:11827306-11827423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
76, 48
               

               
Conread position:
               
2-155
               

               
Cow position:
               
chr28:12048887-12048738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
2-157
               

               
Cow position:
               
chr28:2279852-2279698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr28:2905393-2905576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr28:12987210-12987411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 125
               

               
Conread position:
               
2-204
               

               
Cow position:
               
chr28:26784654-26784452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
82, 155
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr28:118243-118032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr28:3751131-3751332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr28:23480449-23480240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr28:19222785-19222580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
75, 139
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr28:16406899-16407134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr28:6861766-6862001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 160
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr28:3714614-3714858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
76, 103
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr28:3256606-3256858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 169
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr28:4914289-4914027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr28:10745022-10745296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr28:18625035-18625316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 168
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr28:21672611-21672883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
43, 118
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr28:11752332-11752030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr28:12964389-12964683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 29
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr28:28163904-28164200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 41
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr28:32734905-32735206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr28:11687220-11686906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 222
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr28:26922552-26922245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 68
               

               
Conread position:
               
2-320
               

               
Cow position:
               
chr28:26684925-26685244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
2-321
               

               
Cow position:
               
chr28:26220074-26220386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 20
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr28:12619375-12619707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 280
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr28:3408405-3408056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr28:16211284-16210927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 118
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr28:26103528-26103872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
80, 44
               

               
Conread position:
               
2-377
               

               
Cow position:
               
chr28:16346714-16346346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 84
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr28:12430422-12430808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 43
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr28:4090232-4089857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 43
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr28:11422992-11422612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 29
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr28:16370262-16369882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 39
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr28:5684522-5684909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr28:23793490-23793111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 82
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr28:13474118-13474510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr28:29416904-29416513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
2-402
               

               
Cow position:
               
chr28:9636644-9636242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 161
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr28:5437279-5436867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr28:11585395-11584991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 168
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr28:26614699-26615072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr28:4070781-4071179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
2-406
               

               
Cow position:
               
chr28:6059660-6059249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr28:4308086-4307669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr28:33884220-33884625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr28:26340149-26340558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 107
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr28:28766097-28765677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr28:4835033-4834617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr28:11884710-11884304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 17
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr28:16919349-16918948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
2-416
               

               
Cow position:
               
chr28:3024099-3023685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 103
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr28:14997874-14998294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chr28:7144601-7145033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
2-419
               

               
Cow position:
               
chr28:22345831-22346255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr28:22371866-22371437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
2-420
               

               
Cow position:
               
chr28:25701049-25700633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr28:4809606-4810007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 101
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr28:10616139-10615713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
3-148
               

               
Cow position:
               
chr28:3077806-3077948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
3-163
               

               
Cow position:
               
chr28:28076594-28076436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr28:9108255-9108422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 164
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr28:8935747-8935916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 128
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr28:16243945-16243777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr28:5658367-5658547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr28:4022196-4022406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
42, 160
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr28:16253044-16252818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr28:12758695-12758433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 157
               

               
Conread position:
               
3-267
               

               
Cow position:
               
chr28:10999855-10999592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
149, 42
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr28:13267595-13267877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 234
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr28:14649162-14649453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr28:22321235-22321542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 163
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr28:33051834-33052159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 305
               

               
Conread position:
               
3-377
               

               
Cow position:
               
chr28:13865659-13866015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
143, 12
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr28:3078864-3078488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 47
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr28:8787360-8787747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 27
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr28:25056786-25057164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 50
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr28:4881431-4881034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 166
               

               
Conread position:
               
3-405
               

               
Cow position:
               
chr28:11829129-11828739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr28:5204013-5204408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 52
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr28:27218134-27218549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 184
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr28:19023947-19024163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr28:6307704-6307913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
73, 137
               

               
Conread position:
               
4-247
               

               
Cow position:
               
chr28:3000780-3000553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
4-253
               

               
Cow position:
               
chr28:18760228-18759985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr28:4587910-4588163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 130
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr28:2814685-2814435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr28:10534116-10533859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 38
               

               
Conread position:
               
4-268
               

               
Cow position:
               
chr28:17235914-17235660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
39, 59
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr28:10682004-10681736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
4-301
               

               
Cow position:
               
chr28:2862676-2862977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 146
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr28:10172599-10172305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 93
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr28:15044044-15043750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 37
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr28:3169376-3169074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 20
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr28:13607701-13608020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr28:30937852-30937475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr28:31841525-31841121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 121
               

               
Conread position:
               
4-412
               

               
Cow position:
               
chr28:11866855-11866440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
4-415
               

               
Cow position:
               
chr28:6091174-6091588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr28:2819573-2819999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
41, 119
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr28:16364153-16363953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
73, 125
               

               
Conread position:
               
5-245
               

               
Cow position:
               
chr28:18717306-18717077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
77, 122
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr28:4057801-4058039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
176, 29
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr28:16686848-16687100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
228, 36
               

               
Conread position:
               
5-270
               

               
Cow position:
               
chr28:31987417-31987692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
40, 148
               

               
Conread position:
               
5-301
               

               
Cow position:
               
chr28:16109760-16110046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr28:7865138-7865441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr28:21598438-21598138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 50
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr28:13290319-13289953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
5-398
               

               
Cow position:
               
chr28:22500669-22500293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 57
               

               
Conread position:
               
5-402
               

               
Cow position:
               
chr28:11527440-11527046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 12
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr28:9684504-9684144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr28:8084517-8084722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
7-219
               

               
Cow position:
               
chr28:25563897-25564111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
7, 102
               

               
Conread position:
               
7-280
               

               
Cow position:
               
chr28:7512774-7512496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
37, 166
               

               
Conread position:
               
9-219
               

               
Cow position:
               
chr28:15063519-15063313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
32, 110
               

               
Conread position:
               
9-237
               

               
Cow position:
               
chr28:28903847-28903617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
9-239
               

               
Cow position:
               
chr28:2291899-2291675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr28:18186379-18186656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 30
               

               
Conread position:
               
10-183
               

               
Cow position:
               
chr28:10642197-10642024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 72
               

               
Conread position:
               
10-291
               

               
Cow position:
               
chr28:13693567-13693847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
32, 184
               

               
Conread position:
               
10-313
               

               
Cow position:
               
chr28:2961011-2960709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 105
               

               
Conread position:
               
10-387
               

               
Cow position:
               
chr28:2132102-2131740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr28:10589221-10588828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
10-397
               

               
Cow position:
               
chr28:4016360-4016735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 9
               

               
Conread position:
               
11-216
               

               
Cow position:
               
chr28:8656919-8656718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
11-315
               

               
Cow position:
               
chr28:19026184-19025882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr28:657625-657439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
12-256
               

               
Cow position:
               
chr28:22485068-22485317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
67, 121
               

               
Conread position:
               
12-383
               

               
Cow position:
               
chr28:5273611-5273229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
12-412
               

               
Cow position:
               
chr28:1383452-1383048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 76
               

               
Conread position:
               
13-393
               

               
Cow position:
               
chr28:20409216-20409599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 109
               

               
Conread position:
               
14-272
               

               
Cow position:
               
chr28:24368115-24367863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 147
               

               
Conread position:
               
14-402
               

               
Cow position:
               
chr28:14720953-14720562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 91
               

               
Conread position:
               
14-410
               

               
Cow position:
               
chr28:26264628-26265057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
15-225
               

               
Cow position:
               
chr28:12942201-12942414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
16-402
               

               
Cow position:
               
chr28:8291263-8291632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
163, 8
               

               
Conread position:
               
17-377
               

               
Cow position:
               
chr28:21363574-21363932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 61
               

               
Conread position:
               
19-321
               

               
Cow position:
               
chr28:23668954-23668654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
22-195
               

               
Cow position:
               
chr28:29455824-29455652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
22-407
               

               
Cow position:
               
chr28:9426518-9426124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 24
               

               
Conread position:
               
23-409
               

               
Cow position:
               
chr28:33036633-33036264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
154, 97
               

               
Conread position:
               
24-183
               

               
Cow position:
               
chr28:6051570-6051726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
24-198
               

               
Cow position:
               
chr28:15007996-15008166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr28:10212872-10212699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
24-393
               

               
Cow position:
               
chr28:4643928-4643562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
209, 63
               

               
Conread position:
               
24-413
               

               
Cow position:
               
chr28:10495440-10495068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
282, 21
               

               
Conread position:
               
25-307
               

               
Cow position:
               
chr28:32365681-32365958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
26-417
               

               
Cow position:
               
chr28:26327796-26328192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
27-207
               

               
Cow position:
               
chr28:32747767-32747934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 12
               

               
Conread position:
               
27-227
               

               
Cow position:
               
chr28:33032103-33032296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
27-413
               

               
Cow position:
               
chr28:1632817-1632422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
29-385
               

               
Cow position:
               
chr28:24082110-24082470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
31-307
               

               
Cow position:
               
chr28:25806413-25806690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 139
               

               
Conread position:
               
33-220
               

               
Cow position:
               
chr28:7542241-7542055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
34-389
               

               
Cow position:
               
chr28:30327246-30326897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 128
               

               
Conread position:
               
34-406
               

               
Cow position:
               
chr28:29989268-29988887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 96
               

               
Conread position:
               
34-409
               

               
Cow position:
               
chr28:8358751-8359120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 11
               

               
Conread position:
               
34-411
               

               
Cow position:
               
chr28:7439090-7439462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
36-298
               

               
Cow position:
               
chr28:2872764-2873025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 94
               

               
Conread position:
               
37-416
               

               
Cow position:
               
chr28:10863934-10863567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 60
               

               
Conread position:
               
39-222
               

               
Cow position:
               
chr28:7608130-7607947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
125, 121
               

               
Conread position:
               
39-306
               

               
Cow position:
               
chr28:16841896-16841654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
39-392
               

               
Cow position:
               
chr28:30746878-30746531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 105
               

               
Conread position:
               
39-407
               

               
Cow position:
               
chr28:616234-616592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
139, 46
               

               
Conread position:
               
39-415
               

               
Cow position:
               
chr28:33285263-33284902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
40-219
               

               
Cow position:
               
chr28:15577410-15577234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 128
               

               
Conread position:
               
40-274
               

               
Cow position:
               
chr28:4440154-4440378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
43-197
               

               
Cow position:
               
chr28:10202335-10202478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
43-285
               

               
Cow position:
               
chr28:4536309-4536552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
5, 100
               

               
Conread position:
               
43-393
               

               
Cow position:
               
chr28:10057738-10057377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
49-315
               

               
Cow position:
               
chr28:27161470-27161204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
49-417
               

               
Cow position:
               
chr28:9812143-9812512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
50-389
               

               
Cow position:
               
chr28:22571804-22571480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
51-399
               

               
Cow position:
               
chr28:19262727-19262371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
51-402
               

               
Cow position:
               
chr28:25728060-25728398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
51-412
               

               
Cow position:
               
chr28:4763736-4764083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 140
               

               
Conread position:
               
52-389
               

               
Cow position:
               
chr28:7009112-7008777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 44
               

               
Conread position:
               
54-408
               

               
Cow position:
               
chr28:3449164-3449534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
55-219
               

               
Cow position:
               
chr28:5553077-5552912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
55-239
               

               
Cow position:
               
chr28:10762525-10762714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
159, 119
               

               
Conread position:
               
55-304
               

               
Cow position:
               
chr28:12892567-12892325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
177, 7
               

               
Conread position:
               
55-406
               

               
Cow position:
               
chr28:23296190-23296539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
38, 14
               

               
Conread position:
               
55-418
               

               
Cow position:
               
chr28:22332401-22332763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 73
               

               
Conread position:
               
57-263
               

               
Cow position:
               
chr28:1315695-1315482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
57-373
               

               
Cow position:
               
chr28:1538036-1538352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
57-393
               

               
Cow position:
               
chr28:8140350-8140692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 96
               

               
Conread position:
               
60-399
               

               
Cow position:
               
chr28:11346614-11346275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
63-401
               

               
Cow position:
               
chr28:12672587-12672245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
146, 43
               

               
Conread position:
               
64-411
               

               
Cow position:
               
chr28:3484452-3484812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
102, 136
               

               
Conread position:
               
67-402
               

               
Cow position:
               
chr28:32593772-32593417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 96
               

               
Conread position:
               
69-393
               

               
Cow position:
               
chr28:22813145-22813456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 37
               

               
Conread position:
               
70-420
               

               
Cow position:
               
chr28:11079187-11079535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 95
               

               
Conread position:
               
71-274
               

               
Cow position:
               
chr28:2652419-2652224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
72-315
               

               
Cow position:
               
chr28:32174514-32174752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
144, 12
               

               
Conread position:
               
74-383
               

               
Cow position:
               
chr28:25128768-25129082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 166
               

               
Conread position:
               
76-374
               

               
Cow position:
               
chr28:18370121-18369824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 93
               

               
Conread position:
               
76-393
               

               
Cow position:
               
chr28:5577412-5577740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 85
               

               
Conread position:
               
76-402
               

               
Cow position:
               
chr28:12933844-12933519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
156, 75
               

               
Conread position:
               
77-302
               

               
Cow position:
               
chr28:7372233-7372012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
154, 8
               

               
Conread position:
               
77-314
               

               
Cow position:
               
chr28:5166654-5166889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
156, 88
               

               
Conread position:
               
77-409
               

               
Cow position:
               
chr28:23447936-23447613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
156, 84
               

               
Conread position:
               
77-414
               

               
Cow position:
               
chr28:3011385-3011037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 93
               

               
Conread position:
               
78-302
               

               
Cow position:
               
chr28:4765563-4765786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
79-393
               

               
Cow position:
               
chr28:19564338-19564027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 33
               

               
Conread position:
               
79-409
               

               
Cow position:
               
chr28:34248133-34247820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
80-392
               

               
Cow position:
               
chr28:10977732-10978045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
82-266
               

               
Cow position:
               
chr28:12363268-12363083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
82-354
               

               
Cow position:
               
chr28:26055368-26055644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
83-304
               

               
Cow position:
               
chr28:16246169-16245953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
78, 45
               

               
Conread position:
               
88-281
               

               
Cow position:
               
chr28:17071232-17071426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
93-323
               

               
Cow position:
               
chr28:13233205-13232983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
160, 67
               

               
Conread position:
               
95-302
               

               
Cow position:
               
chr28:7388861-7388662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
95-304
               

               
Cow position:
               
chr28:4179461-4179663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
100-402
               

               
Cow position:
               
chr28:7927085-7927381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
102-396
               

               
Cow position:
               
chr28:3740793-3741080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
103-421
               

               
Cow position:
               
chr28:7350571-7350886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 54
               

               
Conread position:
               
104-402
               

               
Cow position:
               
chr28:7619238-7618943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 62
               

               
Conread position:
               
105-335
               

               
Cow position:
               
chr28:13090610-13090382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
106-315
               

               
Cow position:
               
chr28:8147945-8147741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
106-368
               

               
Cow position:
               
chr28:11559717-11559453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 18
               

               
Conread position:
               
107-393
               

               
Cow position:
               
chr28:4181921-4182209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 55
               

               
Conread position:
               
107-406
               

               
Cow position:
               
chr28:10297778-10298063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
279, 60
               

               
Conread position:
               
108-402
               

               
Cow position:
               
chr28:5139078-5138782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
110-315
               

               
Cow position:
               
chr28:25677426-25677218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
110-419
               

               
Cow position:
               
chr28:5262441-5262752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
151, 124
               

               
Conread position:
               
111-270
               

               
Cow position:
               
chr28:3161032-3160875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
122, 54
               

               
Conread position:
               
111-418
               

               
Cow position:
               
chr28:11348351-11348660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
205, 25
               

               
Conread position:
               
112-401
               

               
Cow position:
               
chr28:11815156-11814863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
121, 67
               

               
Conread position:
               
115-399
               

               
Cow position:
               
chr28:3411067-3410777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 199
               

               
Conread position:
               
119-402
               

               
Cow position:
               
chr28:17012362-17012088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
114, 42
               

               
Conread position:
               
123-393
               

               
Cow position:
               
chr28:4013020-4013291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
123-415
               

               
Cow position:
               
chr28:7437526-7437247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
131-402
               

               
Cow position:
               
chr28:3445541-3445261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 35
               

               
Conread position:
               
131-416
               

               
Cow position:
               
chr28:18847491-18847792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 44
               

               
Conread position:
               
131-421
               

               
Cow position:
               
chr28:4873407-4873112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
111, 227
               

               
Conread position:
               
132-419
               

               
Cow position:
               
chr28:6935240-6934943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 39
               

               
Conread position:
               
136-394
               

               
Cow position:
               
chr28:4823553-4823810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
136-419
               

               
Cow position:
               
chr28:33322400-33322683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
137-389
               

               
Cow position:
               
chr28:777619-777880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
138-314
               

               
Cow position:
               
chr28:2762142-2762317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
139-414
               

               
Cow position:
               
chr28:11059452-11059721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
141-392
               

               
Cow position:
               
chr28:3726262-3726001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
142-413
               

               
Cow position:
               
chr28:10964374-10964637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
147-315
               

               
Cow position:
               
chr28:7498192-7498024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
147-410
               

               
Cow position:
               
chr28:4185858-4186128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
149-404
               

               
Cow position:
               
chr28:13371183-13370920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 62
               

               
Conread position:
               
149-407
               

               
Cow position:
               
chr28:11816708-11816462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
149-409
               

               
Cow position:
               
chr28:2279631-2279381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
151-418
               

               
Cow position:
               
chr28:17949154-17948883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
152-393
               

               
Cow position:
               
chr28:32179660-32179907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
154-421
               

               
Cow position:
               
chr28:2077465-2077735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
156-394
               

               
Cow position:
               
chr28:20173801-20174047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
156-411
               

               
Cow position:
               
chr28:659328-659063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
157-395
               

               
Cow position:
               
chr28:17739788-17740035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr28:6975205-6975447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
77, 161
               

               
Conread position:
               
158-403
               

               
Cow position:
               
chr28:11987138-11987381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
158-403
               

               
Cow position:
               
chr28:12055376-12055619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
161-408
               

               
Cow position:
               
chr28:5205239-5205475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 149
               

               
Conread position:
               
162-389
               

               
Cow position:
               
chr28:12991105-12991339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
54, 161
               

               
Conread position:
               
163-410
               

               
Cow position:
               
chr28:21008697-21008446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
163-417
               

               
Cow position:
               
chr28:9705623-9705889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
143, 70
               

               
Conread position:
               
165-412
               

               
Cow position:
               
chr28:13356396-13356138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
166-270
               

               
Cow position:
               
chr28:17393749-17393855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
166-407
               

               
Cow position:
               
chr28:24646566-24646803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
168-394
               

               
Cow position:
               
chr28:19216796-19217021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
11, 149
               

               
Conread position:
               
168-401
               

               
Cow position:
               
chr28:7132111-7131875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
168-402
               

               
Cow position:
               
chr28:6283513-6283272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
168-407
               

               
Cow position:
               
chr28:18770059-18770309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
169-314
               

               
Cow position:
               
chr28:10775737-10775588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
169-393
               

               
Cow position:
               
chr28:4006761-4006989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
169-420
               

               
Cow position:
               
chr28:26944182-26943913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 118
               

               
Conread position:
               
170-392
               

               
Cow position:
               
chr28:17680599-17680832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
170-408
               

               
Cow position:
               
chr28:8304224-8304466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 148
               

               
Conread position:
               
170-411
               

               
Cow position:
               
chr28:4937265-4937012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
171-417
               

               
Cow position:
               
chr28:11743841-11743597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
172-315
               

               
Cow position:
               
chr28:8149653-8149509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
172-320
               

               
Cow position:
               
chr28:3147460-3147607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 62
               

               
Conread position:
               
173-400
               

               
Cow position:
               
chr28:5231918-5232153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
61, 227
               

               
Conread position:
               
175-399
               

               
Cow position:
               
chr28:11016390-11016617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
175-408
               

               
Cow position:
               
chr28:5254856-5255094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
175-419
               

               
Cow position:
               
chr28:4101502-4101746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 132
               

               
Conread position:
               
178-402
               

               
Cow position:
               
chr28:29850830-29850607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 118
               

               
Conread position:
               
180-400
               

               
Cow position:
               
chr28:10203108-10203327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
181-393
               

               
Cow position:
               
chr28:8259616-8259840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
183-391
               

               
Cow position:
               
chr28:3397207-3397005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
184-390
               

               
Cow position:
               
chr28:5805662-5805867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
185-385
               

               
Cow position:
               
chr28:19039027-19038818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
185-389
               

               
Cow position:
               
chr28:4364830-4364619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
119, 48
               

               
Conread position:
               
185-398
               

               
Cow position:
               
chr28:32358100-32358318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
188-410
               

               
Cow position:
               
chr28:4163584-4163354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
189-301
               

               
Cow position:
               
chr28:25675509-25675396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
189-399
               

               
Cow position:
               
chr28:30902122-30902334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
189-421
               

               
Cow position:
               
chr28:16879569-16879808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
189-421
               

               
Cow position:
               
chr28:26826219-26826458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
190-354
               

               
Cow position:
               
chr28:27429028-27429192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 140
               

               
Conread position:
               
190-407
               

               
Cow position:
               
chr28:6563901-6563671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
44, 223
               

               
Conread position:
               
190-408
               

               
Cow position:
               
chr28:5673872-5674097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
191-402
               

               
Cow position:
               
chr28:11411538-11411321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
192-385
               

               
Cow position:
               
chr28:4877432-4877232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 172
               

               
Conread position:
               
193-390
               

               
Cow position:
               
chr28:7557734-7557522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr28:4876443-4876660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
41, 48
               

               
Conread position:
               
193-421
               

               
Cow position:
               
chr28:21207368-21207136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
196-324
               

               
Cow position:
               
chr28:4051201-4051331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
196-393
               

               
Cow position:
               
chr28:28501236-28501450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
196-406
               

               
Cow position:
               
chr28:19994943-19994724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
196-416
               

               
Cow position:
               
chr28:2892254-2892489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
198-350
               

               
Cow position:
               
chr28:10212422-10212266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr28:10891303-10891122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
199-394
               

               
Cow position:
               
chr28:9109222-9109419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
199-415
               

               
Cow position:
               
chr28:20046559-20046773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
200-389
               

               
Cow position:
               
chr28:2777537-2777734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
200-393
               

               
Cow position:
               
chr28:13269738-13269928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
161, 27
               

               
Conread position:
               
200-413
               

               
Cow position:
               
chr28:4022680-4022900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
34, 170
               

               
Conread position:
               
201-412
               

               
Cow position:
               
chr28:10890727-10890513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
203-411
               

               
Cow position:
               
chr28:32014794-32015013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
206-307
               

               
Cow position:
               
chr28:21129192-21129093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
209-392
               

               
Cow position:
               
chr28:8681413-8681230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
209-418
               

               
Cow position:
               
chr28:20281772-20281978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
211-402
               

               
Cow position:
               
chr28:10196847-10196652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 117
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr28:23728281-23728091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
211-421
               

               
Cow position:
               
chr28:3423795-3424013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
213-393
               

               
Cow position:
               
chr28:26960888-26960705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
213-394
               

               
Cow position:
               
chr28:2151420-2151231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
214-393
               

               
Cow position:
               
chr28:10958823-10959007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
19, 70
               

               
Conread position:
               
214-407
               

               
Cow position:
               
chr28:7964657-7964456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
215-411
               

               
Cow position:
               
chr28:3678384-3678585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
21, 104
               

               
Conread position:
               
219-393
               

               
Cow position:
               
chr28:26574439-26574609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
98, 14
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chr28:17943759-17943946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
225-400
               

               
Cow position:
               
chr28:24726404-24726228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 157
               

               
Conread position:
               
227-401
               

               
Cow position:
               
chr28:10762929-10763104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
136, 79
               

               
Conread position:
               
228-405
               

               
Cow position:
               
chr28:9677704-9677883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
229-400
               

               
Cow position:
               
chr28:16681390-16681551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
7, 35
               

               
Conread position:
               
229-419
               

               
Cow position:
               
chr28:4027426-4027236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
134, 87
               

               
Conread position:
               
230-421
               

               
Cow position:
               
chr28:11305595-11305400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
233-316
               

               
Cow position:
               
chr28:23641224-23641141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
74
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
233-410
               

               
Cow position:
               
chr28:24651565-24651390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
84, 121
               

               
Conread position:
               
233-417
               

               
Cow position:
               
chr28:6301122-6301317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
71, 178
               

               
Conread position:
               
234-417
               

               
Cow position:
               
chr28:34830196-34830385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
236-413
               

               
Cow position:
               
chr28:4866529-4866348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
81, 88
               

               
Conread position:
               
242-411
               

               
Cow position:
               
chr28:24238427-24238258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
121, 64
               

               
Conread position:
               
243-401
               

               
Cow position:
               
chr28:2737467-2737310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
120, 65
               

               
Conread position:
               
244-389
               

               
Cow position:
               
chr28:4588370-4588518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
244-401
               

               
Cow position:
               
chr28:21263209-21263369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 147
               

               
Conread position:
               
248-416
               

               
Cow position:
               
chr28:7750960-7750788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
250-419
               

               
Cow position:
               
chr28:3257046-3257227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
252-419
               

               
Cow position:
               
chr28:16177314-16177488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               
Show alignments to all cow chromosomes.