Cow genome map

Conread name: rcmu37_n4.y1

Conread position: 1-118
Cow position: chrX:42855241-42855365 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 1-130
Cow position: chrX:41271375-41271245 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 1-152
Cow position: chrX:45759230-45759376 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 1-153
Cow position: chrX:48684390-48684239 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 83, 33

Conread position: 1-159
Cow position: chrX:35042052-35042216 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 1-159
Cow position: chrX:42282265-42282419 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-164
Cow position: chrX:21665761-21665598 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 142

Conread position: 1-165
Cow position: chrX:2383321-2383486 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 1-165
Cow position: chrX:31256700-31256863 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 1-166
Cow position: chrX:14003812-14003643 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 42, 166

Conread position: 1-167
Cow position: chrX:40452380-40452211 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 156

Conread position: 1-169
Cow position: chrX:11806184-11806012 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 1-170
Cow position: chrX:42086694-42086861 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 87

Conread position: 1-170
Cow position: chrX:42339103-42338944 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1-174
Cow position: chrX:24201019-24201193 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 150

Conread position: 1-176
Cow position: chrX:11674898-11675070 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 1-177
Cow position: chrX:2648518-2648344 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 1-181
Cow position: chrX:35609819-35610002 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 1-193
Cow position: chrX:20582863-20583044 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 1-197
Cow position: chrX:45874831-45875024 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 152

Conread position: 1-198
Cow position: chrX:40116254-40116444 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 133, 0

Conread position: 1-201
Cow position: chrX:26285812-26286011 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 76, 99

Conread position: 1-201
Cow position: chrX:44053091-44053290 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 166, 0

Conread position: 1-204
Cow position: chrX:10095859-10096065 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 41, 92

Conread position: 1-206
Cow position: chrX:37048747-37048546 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 85

Conread position: 1-207
Cow position: chrX:9997501-9997298 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 149, 31

Conread position: 1-207
Cow position: chrX:41743745-41743950 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 83, 41

Conread position: 1-211
Cow position: chrX:14924832-14925040 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 78, 155

Conread position: 1-211
Cow position: chrX:25238009-25238219 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 100

Conread position: 1-211
Cow position: chrX:29509611-29509398 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 81, 172

Conread position: 1-211
Cow position: chrX:37750421-37750214 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 1-212
Cow position: chrX:28836069-28835861 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 1-215
Cow position: chrX:36250029-36249817 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 151

Conread position: 1-219
Cow position: chrX:19015275-19015485 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 21

Conread position: 1-219
Cow position: chrX:34270239-34270450 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 31

Conread position: 1-222
Cow position: chrX:16790005-16789805 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 1-223
Cow position: chrX:8899857-8900079 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 147

Conread position: 1-224
Cow position: chrX:40647810-40648041 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 62, 181

Conread position: 1-224
Cow position: chrX:40789037-40789265 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 86

Conread position: 1-225
Cow position: chrX:9855133-9855352 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 132

Conread position: 1-225
Cow position: chrX:36961468-36961695 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 42, 168

Conread position: 1-227
Cow position: chrX:42874810-42875039 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 181
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 42, 173

Conread position: 1-229
Cow position: chrX:23970221-23970438 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 225, 30

Conread position: 1-231
Cow position: chrX:12018108-12018352 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 169

Conread position: 1-231
Cow position: chrX:41167132-41166902 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 77, 168

Conread position: 1-231
Cow position: chrX:46146728-46146501 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 109, 54

Conread position: 1-234
Cow position: chrX:20752092-20752319 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 30

Conread position: 1-235
Cow position: chrX:19188769-19188996 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 164

Conread position: 1-236
Cow position: chrX:7718687-7718914 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 61, 42

Conread position: 1-237
Cow position: chrX:8991720-8991957 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 78, 49

Conread position: 1-240
Cow position: chrX:26876050-26875811 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 161

Conread position: 1-243
Cow position: chrX:6234616-6234376 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 83, 33

Conread position: 1-244
Cow position: chrX:678735-678481 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 69

Conread position: 1-248
Cow position: chrX:24105459-24105702 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 113

Conread position: 1-249
Cow position: chrX:11589756-11589509 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 18, 162

Conread position: 1-250
Cow position: chrX:41198937-41199185 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 79, 40

Conread position: 1-251
Cow position: chrX:37540957-37541198 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 181
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 82, 42

Conread position: 1-253
Cow position: chrX:13785525-13785280 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 25

Conread position: 1-255
Cow position: chrX:13265787-13265542 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 214, 52

Conread position: 1-255
Cow position: chrX:42507814-42507563 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 43, 111

Conread position: 1-261
Cow position: chrX:7497076-7497334 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 230, 81

Conread position: 1-263
Cow position: chrX:37843553-37843810 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 80, 132

Conread position: 1-266
Cow position: chrX:40481040-40480776 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 38, 171

Conread position: 1-268
Cow position: chrX:26440947-26440687 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 67

Conread position: 1-270
Cow position: chrX:47344127-47344396 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 63

Conread position: 1-272
Cow position: chrX:14900889-14900631 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 232, 81

Conread position: 1-273
Cow position: chrX:21642647-21642379 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 104

Conread position: 1-274
Cow position: chrX:2467712-2467988 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 142

Conread position: 1-274
Cow position: chrX:34663011-34662742 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 82, 21

Conread position: 1-274
Cow position: chrX:36060984-36061264 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 167

Conread position: 1-274
Cow position: chrX:40809519-40809797 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 82, 185

Conread position: 1-276
Cow position: chrX:27680234-27680504 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 40

Conread position: 1-280
Cow position: chrX:47484439-47484154 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 156

Conread position: 1-280
Cow position: chrX:48010427-48010714 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 49, 154

Conread position: 1-283
Cow position: chrX:7571739-7572018 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 42

Conread position: 1-284
Cow position: chrX:28111339-28111623 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 189
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 143

Conread position: 1-284
Cow position: chrX:38936533-38936814 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 213, 84

Conread position: 1-284
Cow position: chrX:43049177-43049445 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 44, 165

Conread position: 1-284
Cow position: chrX:46722908-46722620 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 202
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 42, 158

Conread position: 1-284
Cow position: chrX:47301071-47300789 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 104

Conread position: 1-284
Cow position: chrX:48652894-48652607 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 133

Conread position: 1-286
Cow position: chrX:26625844-26625555 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 110

Conread position: 1-298
Cow position: chrX:11455221-11454921 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 212
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 24

Conread position: 1-300
Cow position: chrX:19690050-19690345 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 41, 110

Conread position: 1-301
Cow position: chrX:917539-917237 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 52, 99

Conread position: 1-301
Cow position: chrX:1514568-1514288 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 80, 33

Conread position: 1-301
Cow position: chrX:3489052-3488761 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 232, 30

Conread position: 1-301
Cow position: chrX:17662764-17662467 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 169

Conread position: 1-302
Cow position: chrX:11073356-11073059 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 63

Conread position: 1-302
Cow position: chrX:45098944-45099260 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 1-302
Cow position: chrX:45174677-45174982 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 106

Conread position: 1-304
Cow position: chrX:619175-618875 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 165

Conread position: 1-304
Cow position: chrX:40269317-40269626 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-304
Cow position: chrX:45845928-45846235 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 165

Conread position: 1-306
Cow position: chrX:47481632-47481932 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 215
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 46, 168

Conread position: 1-307
Cow position: chrX:42171467-42171160 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 163

Conread position: 1-308
Cow position: chrX:22821880-22822184 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 36, 85

Conread position: 1-308
Cow position: chrX:27772128-27771830 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 232, 141

Conread position: 1-309
Cow position: chrX:23785486-23785786 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 40, 136

Conread position: 1-309
Cow position: chrX:27176487-27176174 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 207
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 138

Conread position: 1-309
Cow position: chrX:29120889-29121186 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 28

Conread position: 1-309
Cow position: chrX:30543458-30543145 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 85

Conread position: 1-313
Cow position: chrX:11082781-11082478 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 230, 96

Conread position: 1-313
Cow position: chrX:17964690-17964379 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 205
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 173

Conread position: 1-314
Cow position: chrX:5872146-5872461 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 143

Conread position: 1-315
Cow position: chrX:169693-169401 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 45

Conread position: 1-315
Cow position: chrX:4044018-4043722 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 1-315
Cow position: chrX:8797080-8797394 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 230

Conread position: 1-315
Cow position: chrX:17888573-17888278 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 6, 0

Conread position: 1-315
Cow position: chrX:28878326-28878029 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 79, 21

Conread position: 1-315
Cow position: chrX:32623415-32623715 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 172, 49

Conread position: 1-315
Cow position: chrX:34401830-34402151 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 185

Conread position: 1-315
Cow position: chrX:34502751-34503067 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 169

Conread position: 1-315
Cow position: chrX:42235701-42235380 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 313

Conread position: 1-315
Cow position: chrX:43730382-43730079 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 42

Conread position: 1-316
Cow position: chrX:28134178-28134484 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 79

Conread position: 1-317
Cow position: chrX:33639804-33640123 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 108

Conread position: 1-318
Cow position: chrX:17725807-17726121 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 161

Conread position: 1-320
Cow position: chrX:39546141-39545831 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 210
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 99

Conread position: 1-321
Cow position: chrX:17541796-17542108 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 53, 42

Conread position: 1-321
Cow position: chrX:17630970-17630652 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 232, 93

Conread position: 1-321
Cow position: chrX:19930488-19930792 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 230, 84

Conread position: 1-321
Cow position: chrX:23091714-23092025 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 85

Conread position: 1-321
Cow position: chrX:32309938-32310256 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 42, 91

Conread position: 1-322
Cow position: chrX:46433315-46433643 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 171

Conread position: 1-325
Cow position: chrX:6690415-6690104 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 30

Conread position: 1-325
Cow position: chrX:9416860-9416530 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 206

Conread position: 1-325
Cow position: chrX:15596870-15597179 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 117

Conread position: 1-327
Cow position: chrX:42470104-42469786 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 33

Conread position: 1-333
Cow position: chrX:5900290-5900627 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 77, 46

Conread position: 1-335
Cow position: chrX:37836420-37836744 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 44, 155

Conread position: 1-344
Cow position: chrX:24288100-24287753 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 40, 92

Conread position: 1-347
Cow position: chrX:16416339-16416686 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 106

Conread position: 1-362
Cow position: chrX:12309556-12309187 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 70

Conread position: 1-362
Cow position: chrX:35542724-35543082 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 143

Conread position: 1-375
Cow position: chrX:37119432-37119789 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 232, 13

Conread position: 1-376
Cow position: chrX:4279282-4278904 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 46, 100

Conread position: 1-376
Cow position: chrX:4768583-4768943 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 315, 21

Conread position: 1-376
Cow position: chrX:34238553-34238938 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 106

Conread position: 1-377
Cow position: chrX:1616215-1615842 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 229

Conread position: 1-377
Cow position: chrX:10831664-10831265 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 1-377
Cow position: chrX:43780020-43779649 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 264
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 31, 166

Conread position: 1-380
Cow position: chrX:20151683-20152067 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 26

Conread position: 1-384
Cow position: chrX:7646093-7646459 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 230, 32

Conread position: 1-385
Cow position: chrX:7277752-7278130 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 27

Conread position: 1-385
Cow position: chrX:14973900-14973533 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 80, 21

Conread position: 1-385
Cow position: chrX:15007318-15006935 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 13

Conread position: 1-385
Cow position: chrX:22074633-22075019 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 122

Conread position: 1-385
Cow position: chrX:31260797-31260401 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 42, 98

Conread position: 1-385
Cow position: chrX:35413465-35413818 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 124, 27

Conread position: 1-389
Cow position: chrX:9252345-9251935 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 1-389
Cow position: chrX:9425909-9425534 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 42, 83

Conread position: 1-389
Cow position: chrX:27394181-27393790 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 45

Conread position: 1-389
Cow position: chrX:34376788-34377167 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 42

Conread position: 1-389
Cow position: chrX:36283178-36283568 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 36, 161

Conread position: 1-389
Cow position: chrX:37489563-37489957 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 33

Conread position: 1-389
Cow position: chrX:38549281-38549675 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 87

Conread position: 1-389
Cow position: chrX:41122904-41123273 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 80, 23

Conread position: 1-390
Cow position: chrX:9201379-9201772 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 164

Conread position: 1-390
Cow position: chrX:25035555-25035152 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 161

Conread position: 1-390
Cow position: chrX:32420051-32420439 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 273
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 57, 143

Conread position: 1-390
Cow position: chrX:38963939-38964326 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 49

Conread position: 1-390
Cow position: chrX:42381267-42380883 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 50

Conread position: 1-392
Cow position: chrX:6407381-6407774 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 49

Conread position: 1-392
Cow position: chrX:23666955-23667326 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 255
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 162

Conread position: 1-393
Cow position: chrX:11939094-11938721 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 125

Conread position: 1-393
Cow position: chrX:27174828-27175234 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 227

Conread position: 1-393
Cow position: chrX:31442989-31442607 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 99

Conread position: 1-393
Cow position: chrX:34792478-34792091 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 57

Conread position: 1-393
Cow position: chrX:35268720-35269088 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 45

Conread position: 1-393
Cow position: chrX:40035612-40035210 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 94

Conread position: 1-393
Cow position: chrX:40183517-40183121 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 266
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 160

Conread position: 1-394
Cow position: chrX:1503171-1503540 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 268
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 231, 121

Conread position: 1-394
Cow position: chrX:4996439-4996822 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 25

Conread position: 1-394
Cow position: chrX:22624313-22624694 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 274
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 36, 81

Conread position: 1-394
Cow position: chrX:33855400-33854992 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 165

Conread position: 1-395
Cow position: chrX:42247351-42246947 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 42

Conread position: 1-397
Cow position: chrX:45967996-45968373 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 234, 31

Conread position: 1-398
Cow position: chrX:47248952-47248559 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 281
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 51, 42

Conread position: 1-400
Cow position: chrX:3654437-3654844 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 273
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 170

Conread position: 1-401
Cow position: chrX:34554561-34554965 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 283
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 87, 32

Conread position: 1-402
Cow position: chrX:7351128-7351543 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 166

Conread position: 1-402
Cow position: chrX:16762605-16763007 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 18

Conread position: 1-402
Cow position: chrX:25208014-25207621 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 132

Conread position: 1-402
Cow position: chrX:27442723-27442296 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 295
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 77, 48

Conread position: 1-402
Cow position: chrX:34441619-34441210 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 185

Conread position: 1-402
Cow position: chrX:36975782-36976191 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 136

Conread position: 1-402
Cow position: chrX:45501981-45502375 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 103

Conread position: 1-403
Cow position: chrX:21593116-21593531 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 165

Conread position: 1-404
Cow position: chrX:4398958-4399360 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 107

Conread position: 1-405
Cow position: chrX:27509187-27508778 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 81

Conread position: 1-405
Cow position: chrX:46532677-46532249 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 418

Conread position: 1-406
Cow position: chrX:22387415-22387001 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 166

Conread position: 1-406
Cow position: chrX:39938690-39938293 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 50

Conread position: 1-408
Cow position: chrX:4633018-4632606 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 27

Conread position: 1-408
Cow position: chrX:10866035-10865621 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 24, 40

Conread position: 1-408
Cow position: chrX:27705422-27705836 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 19

Conread position: 1-409
Cow position: chrX:11633511-11633927 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 168

Conread position: 1-409
Cow position: chrX:11655921-11656322 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 165

Conread position: 1-409
Cow position: chrX:25571161-25570760 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 266
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 73

Conread position: 1-409
Cow position: chrX:41790612-41790177 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 291
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 44, 106

Conread position: 1-409
Cow position: chrX:45110488-45110898 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 70

Conread position: 1-409
Cow position: chrX:48044367-48043975 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 281
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 25, 131

Conread position: 1-410
Cow position: chrX:4269234-4268820 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 155

Conread position: 1-410
Cow position: chrX:13191711-13191317 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 209, 127

Conread position: 1-410
Cow position: chrX:15485794-15485384 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 278
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 82, 155

Conread position: 1-410
Cow position: chrX:29602000-29601579 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 169

Conread position: 1-411
Cow position: chrX:21672384-21672810 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 165

Conread position: 1-411
Cow position: chrX:27446521-27446935 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 168

Conread position: 1-411
Cow position: chrX:30963039-30962622 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 42

Conread position: 1-411
Cow position: chrX:44192620-44192190 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 287
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 44, 171

Conread position: 1-411
Cow position: chrX:45598771-45598357 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 77

Conread position: 1-412
Cow position: chrX:17231567-17231991 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 1-412
Cow position: chrX:23563964-23563537 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 160

Conread position: 1-412
Cow position: chrX:47046687-47046265 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 287
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 167

Conread position: 1-413
Cow position: chrX:7721817-7722224 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 231

Conread position: 1-414
Cow position: chrX:8925538-8925932 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 33

Conread position: 1-414
Cow position: chrX:12979998-12979577 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 126

Conread position: 1-414
Cow position: chrX:46587650-46588074 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 163

Conread position: 1-415
Cow position: chrX:13177632-13177233 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 102

Conread position: 1-415
Cow position: chrX:22921146-22921579 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 293
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 16

Conread position: 1-415
Cow position: chrX:33000736-33001155 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 42

Conread position: 1-416
Cow position: chrX:38218540-38218969 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 85

Conread position: 1-417
Cow position: chrX:151734-152161 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 296
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 49, 10

Conread position: 1-417
Cow position: chrX:1176150-1175736 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 286
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 35, 145

Conread position: 1-417
Cow position: chrX:15147355-15146942 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 38

Conread position: 1-417
Cow position: chrX:28013607-28013187 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 289
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 78, 31

Conread position: 1-417
Cow position: chrX:44657132-44656712 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 279
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 44, 198

Conread position: 1-418
Cow position: chrX:11856261-11856659 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 122

Conread position: 1-418
Cow position: chrX:34411673-34412105 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 73

Conread position: 1-420
Cow position: chrX:3579777-3580205 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 130

Conread position: 1-420
Cow position: chrX:32020289-32019872 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 288
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 156

Conread position: 1-420
Cow position: chrX:35885897-35885471 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 147

Conread position: 1-420
Cow position: chrX:38935114-38935544 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 301
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 32, 105

Conread position: 1-421
Cow position: chrX:20887812-20887388 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 8

Conread position: 1-421
Cow position: chrX:30133496-30133059 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 53

Conread position: 1-421
Cow position: chrX:31436315-31436730 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 33

Conread position: 1-421
Cow position: chrX:44961580-44962017 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 42

Conread position: 1-421
Cow position: chrX:47873509-47873076 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 283
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 51, 159

Conread position: 2-139
Cow position: chrX:10252349-10252210 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 41, 16

Conread position: 2-141
Cow position: chrX:46430024-46429887 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 128, 0

Conread position: 2-148
Cow position: chrX:38967484-38967628 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 77, 53

Conread position: 2-174
Cow position: chrX:35284457-35284626 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 29

Conread position: 2-180
Cow position: chrX:1505545-1505720 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 41

Conread position: 2-199
Cow position: chrX:48370931-48371119 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 53

Conread position: 2-203
Cow position: chrX:4750470-4750271 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 172, 0

Conread position: 2-204
Cow position: chrX:17908450-17908255 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 2-211
Cow position: chrX:12115873-12116087 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 166

Conread position: 2-216
Cow position: chrX:17497930-17498130 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 32, 0

Conread position: 2-225
Cow position: chrX:25232424-25232647 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 35, 45

Conread position: 2-226
Cow position: chrX:34990874-34991091 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 24, 0

Conread position: 2-257
Cow position: chrX:20709905-20710161 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 19, 144

Conread position: 2-270
Cow position: chrX:45089276-45089546 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 158

Conread position: 2-270
Cow position: chrX:45993052-45993330 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 68

Conread position: 2-280
Cow position: chrX:47166051-47165776 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 10

Conread position: 2-283
Cow position: chrX:7508972-7509252 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 163

Conread position: 2-284
Cow position: chrX:44836828-44837090 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 132, 41

Conread position: 2-284
Cow position: chrX:48195207-48194921 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 155

Conread position: 2-302
Cow position: chrX:10412155-10411852 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 107

Conread position: 2-303
Cow position: chrX:39558513-39558216 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 51

Conread position: 2-304
Cow position: chrX:34192510-34192790 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 2-307
Cow position: chrX:37232243-37232544 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 161

Conread position: 2-308
Cow position: chrX:29289410-29289714 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 225
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 107

Conread position: 2-308
Cow position: chrX:37574690-37574979 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 53

Conread position: 2-314
Cow position: chrX:24424554-24424257 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 41, 56

Conread position: 2-314
Cow position: chrX:41884584-41884268 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 164

Conread position: 2-315
Cow position: chrX:6278672-6278353 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 165

Conread position: 2-315
Cow position: chrX:13382159-13382470 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 164

Conread position: 2-315
Cow position: chrX:31311859-31312174 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 132

Conread position: 2-317
Cow position: chrX:33493608-33493921 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 91

Conread position: 2-320
Cow position: chrX:43527337-43527660 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 166

Conread position: 2-321
Cow position: chrX:24259748-24259433 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 211
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 170, 101

Conread position: 2-321
Cow position: chrX:35273186-35273515 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 107

Conread position: 2-321
Cow position: chrX:40557842-40557528 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 22

Conread position: 2-325
Cow position: chrX:36067853-36068167 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 39

Conread position: 2-362
Cow position: chrX:13647950-13647586 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 22

Conread position: 2-378
Cow position: chrX:13868527-13868921 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 275
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 74, 169

Conread position: 2-378
Cow position: chrX:34543620-34544003 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 128

Conread position: 2-385
Cow position: chrX:22482855-22482465 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 127

Conread position: 2-385
Cow position: chrX:38642091-38642466 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 115

Conread position: 2-385
Cow position: chrX:40567433-40567829 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 48, 121

Conread position: 2-393
Cow position: chrX:6544090-6544477 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 127

Conread position: 2-393
Cow position: chrX:13912914-13913307 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 44

Conread position: 2-393
Cow position: chrX:23497831-23497465 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 196, 53

Conread position: 2-393
Cow position: chrX:35224132-35224508 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 41

Conread position: 2-393
Cow position: chrX:37781284-37780879 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 166

Conread position: 2-396
Cow position: chrX:29542385-29541993 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 160

Conread position: 2-400
Cow position: chrX:28847045-28846654 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 47

Conread position: 2-405
Cow position: chrX:17794819-17795225 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 64

Conread position: 2-407
Cow position: chrX:9635347-9634945 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 89

Conread position: 2-408
Cow position: chrX:41879101-41878688 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 117

Conread position: 2-409
Cow position: chrX:27145457-27145844 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 138

Conread position: 2-412
Cow position: chrX:41238532-41238112 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 41

Conread position: 2-412
Cow position: chrX:48236645-48237066 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 284
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 161

Conread position: 2-413
Cow position: chrX:27432085-27431675 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 158

Conread position: 2-413
Cow position: chrX:44054635-44055053 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 155

Conread position: 2-414
Cow position: chrX:8917226-8917648 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 292
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 168

Conread position: 2-414
Cow position: chrX:20791984-20791588 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 271
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 83, 97

Conread position: 2-414
Cow position: chrX:22812894-22813320 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 296
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 35, 134

Conread position: 2-417
Cow position: chrX:20340057-20339637 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 17

Conread position: 2-419
Cow position: chrX:31489345-31489777 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 41

Conread position: 3-166
Cow position: chrX:19019276-19019107 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 40

Conread position: 3-204
Cow position: chrX:30833011-30832819 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 3-204
Cow position: chrX:38439309-38439514 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 3-211
Cow position: chrX:29563536-29563329 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 74, 97

Conread position: 3-219
Cow position: chrX:15139710-15139499 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 164, 0

Conread position: 3-224
Cow position: chrX:9953976-9954192 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 130

Conread position: 3-233
Cow position: chrX:41992207-41991983 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 21

Conread position: 3-240
Cow position: chrX:36778242-36778478 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 136

Conread position: 3-251
Cow position: chrX:22465790-22466037 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 174, 30

Conread position: 3-257
Cow position: chrX:48385529-48385276 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 165

Conread position: 3-270
Cow position: chrX:1055555-1055281 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 35

Conread position: 3-280
Cow position: chrX:30263087-30263368 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 76, 161

Conread position: 3-284
Cow position: chrX:45403999-45403711 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 165

Conread position: 3-297
Cow position: chrX:27516367-27516646 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 76, 42

Conread position: 3-302
Cow position: chrX:45414465-45414172 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 159

Conread position: 3-306
Cow position: chrX:9041395-9041108 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 31, 37

Conread position: 3-308
Cow position: chrX:14599364-14599670 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 147

Conread position: 3-321
Cow position: chrX:23514180-23513870 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 3-325
Cow position: chrX:18695085-18694776 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 46

Conread position: 3-334
Cow position: chrX:11717948-11717618 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 28

Conread position: 3-385
Cow position: chrX:14275901-14275527 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 3-385
Cow position: chrX:44396856-44397235 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 40

Conread position: 3-389
Cow position: chrX:14884127-14883729 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 163

Conread position: 3-393
Cow position: chrX:32820863-32821271 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 161

Conread position: 3-400
Cow position: chrX:6488421-6488802 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 283
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 75, 31

Conread position: 3-403
Cow position: chrX:161256-161639 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 3-403
Cow position: chrX:47186486-47186085 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 121

Conread position: 3-415
Cow position: chrX:33466448-33466875 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 27

Conread position: 3-417
Cow position: chrX:46072986-46072573 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 37

Conread position: 3-418
Cow position: chrX:42492680-42492259 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 110

Conread position: 3-419
Cow position: chrX:7178742-7179139 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 285
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 79, 15

Conread position: 4-141
Cow position: chrX:44731430-44731571 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 4-142
Cow position: chrX:24149475-24149615 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 4-219
Cow position: chrX:42461910-42461696 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 159

Conread position: 4-283
Cow position: chrX:21004517-21004797 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 126

Conread position: 4-300
Cow position: chrX:47054695-47054395 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 80, 30

Conread position: 4-315
Cow position: chrX:38006932-38006626 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 157

Conread position: 4-318
Cow position: chrX:38853032-38853345 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 126

Conread position: 4-337
Cow position: chrX:7336664-7337008 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 142

Conread position: 4-392
Cow position: chrX:1499505-1499885 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 30

Conread position: 4-394
Cow position: chrX:37072241-37072619 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 13

Conread position: 4-405
Cow position: chrX:7513350-7513754 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 173, 126

Conread position: 4-411
Cow position: chrX:18485630-18486054 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 287
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 39, 103

Conread position: 4-414
Cow position: chrX:20677207-20677616 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 61

Conread position: 4-418
Cow position: chrX:5638330-5637919 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 97

Conread position: 4-421
Cow position: chrX:41673940-41674358 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 284
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 165

Conread position: 5-171
Cow position: chrX:46315544-46315374 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 37, 0

Conread position: 5-260
Cow position: chrX:28929678-28929932 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 170
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 149, 21

Conread position: 5-284
Cow position: chrX:47303043-47302763 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 38, 102

Conread position: 5-291
Cow position: chrX:9161424-9161695 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 192
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 84, 25

Conread position: 5-304
Cow position: chrX:16514428-16514133 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 22, 107

Conread position: 5-314
Cow position: chrX:878536-878236 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 29

Conread position: 5-321
Cow position: chrX:6563348-6563668 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 232

Conread position: 5-337
Cow position: chrX:8730916-8731259 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 32, 134

Conread position: 5-362
Cow position: chrX:41068564-41068918 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 21

Conread position: 5-393
Cow position: chrX:6413881-6414265 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 153

Conread position: 5-393
Cow position: chrX:45430180-45429799 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 119

Conread position: 5-395
Cow position: chrX:38094690-38094291 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 191

Conread position: 5-400
Cow position: chrX:25338016-25338402 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 269
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 108

Conread position: 5-402
Cow position: chrX:12290572-12290961 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 283
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 30

Conread position: 5-410
Cow position: chrX:27206636-27207045 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 34

Conread position: 5-419
Cow position: chrX:25713633-25714032 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 280
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 9, 96

Conread position: 5-420
Cow position: chrX:32329994-32330434 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 301
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 96

Conread position: 6-160
Cow position: chrX:35388068-35387910 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 132
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 6-218
Cow position: chrX:42994450-42994660 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 99

Conread position: 6-274
Cow position: chrX:22454252-22453994 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 7, 20

Conread position: 6-303
Cow position: chrX:37986070-37986358 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 110

Conread position: 6-391
Cow position: chrX:34532366-34532741 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 25

Conread position: 7-212
Cow position: chrX:47757090-47756887 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 71, 108

Conread position: 7-216
Cow position: chrX:28157333-28157543 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 51, 36

Conread position: 8-308
Cow position: chrX:31340547-31340848 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 157

Conread position: 8-389
Cow position: chrX:32431469-32431827 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 261
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 170, 22

Conread position: 10-225
Cow position: chrX:30162838-30163054 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 10-274
Cow position: chrX:488331-488608 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 10-284
Cow position: chrX:24132310-24132037 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 62

Conread position: 10-284
Cow position: chrX:29032256-29032524 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 23

Conread position: 10-291
Cow position: chrX:10302180-10302461 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 169, 72

Conread position: 10-308
Cow position: chrX:630469-630172 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 89

Conread position: 10-321
Cow position: chrX:20801620-20801918 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 223, 36

Conread position: 10-336
Cow position: chrX:2786707-2786394 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 213
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 225, 45

Conread position: 10-396
Cow position: chrX:21664884-21664510 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 251
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 212

Conread position: 10-406
Cow position: chrX:36355957-36356347 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 105

Conread position: 11-169
Cow position: chrX:30005111-30005265 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 59

Conread position: 11-187
Cow position: chrX:33590570-33590750 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 11-308
Cow position: chrX:32743381-32743671 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 106, 37

Conread position: 11-354
Cow position: chrX:28866153-28865814 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 133, 44

Conread position: 11-375
Cow position: chrX:31252257-31252613 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 154

Conread position: 11-377
Cow position: chrX:27227966-27228345 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 158

Conread position: 11-393
Cow position: chrX:10959558-10959184 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 265
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 174

Conread position: 11-407
Cow position: chrX:8869563-8869158 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 76

Conread position: 12-211
Cow position: chrX:29055963-29056158 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 133, 85

Conread position: 12-219
Cow position: chrX:28105764-28105966 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 71

Conread position: 12-421
Cow position: chrX:11844403-11843974 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 287
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 71, 102

Conread position: 13-208
Cow position: chrX:35969238-35969049 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 30

Conread position: 14-299
Cow position: chrX:25193506-25193785 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 184
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 153, 167

Conread position: 14-305
Cow position: chrX:37910293-37910579 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 213, 29

Conread position: 14-411
Cow position: chrX:23561723-23562122 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 294
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 220, 12

Conread position: 15-261
Cow position: chrX:157930-157686 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 28

Conread position: 15-283
Cow position: chrX:48571146-48570875 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 18, 25

Conread position: 16-148
Cow position: chrX:25411688-25411821 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 54

Conread position: 16-389
Cow position: chrX:12249651-12250043 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 139, 81

Conread position: 16-404
Cow position: chrX:20584166-20584555 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 298

Conread position: 17-301
Cow position: chrX:38066605-38066324 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 115

Conread position: 19-311
Cow position: chrX:29680409-29680120 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 142

Conread position: 19-385
Cow position: chrX:21986441-21986077 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 143

Conread position: 23-417
Cow position: chrX:29723596-29724007 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 281
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 56, 128

Conread position: 24-219
Cow position: chrX:47191548-47191359 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 59

Conread position: 24-260
Cow position: chrX:12405531-12405291 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 135

Conread position: 24-315
Cow position: chrX:11085201-11084918 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 58, 119

Conread position: 24-315
Cow position: chrX:42873249-42873530 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 53, 15

Conread position: 25-307
Cow position: chrX:19273867-19273570 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 25-389
Cow position: chrX:19878907-19879244 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 336, 25

Conread position: 25-389
Cow position: chrX:24331639-24332005 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 23

Conread position: 25-400
Cow position: chrX:11614556-11614914 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 137

Conread position: 27-219
Cow position: chrX:35681195-35681390 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 14, 139

Conread position: 27-409
Cow position: chrX:34565142-34565534 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 58

Conread position: 28-402
Cow position: chrX:41870933-41871298 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 83

Conread position: 28-406
Cow position: chrX:27287874-27287491 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 249
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 71, 57

Conread position: 28-414
Cow position: chrX:37955693-37956099 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 91

Conread position: 29-393
Cow position: chrX:42855316-42855695 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 10

Conread position: 30-322
Cow position: chrX:7710681-7710388 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 53, 136

Conread position: 31-275
Cow position: chrX:48262471-48262711 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 12

Conread position: 31-332
Cow position: chrX:15814950-15815242 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 202, 84

Conread position: 31-398
Cow position: chrX:36393484-36393104 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 255
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 50, 172

Conread position: 33-409
Cow position: chrX:12437386-12437033 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 22

Conread position: 34-271
Cow position: chrX:27685113-27685350 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 133

Conread position: 34-304
Cow position: chrX:616396-616125 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 34-304
Cow position: chrX:48014307-48014569 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 197, 45

Conread position: 34-321
Cow position: chrX:39126199-39126475 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 199, 48

Conread position: 34-385
Cow position: chrX:30421063-30420743 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 239
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 329, 88

Conread position: 34-393
Cow position: chrX:34313899-34314253 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 29

Conread position: 34-408
Cow position: chrX:41027023-41027408 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 48

Conread position: 35-256
Cow position: chrX:16055078-16055293 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 106

Conread position: 35-393
Cow position: chrX:39415500-39415158 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 196, 75

Conread position: 35-400
Cow position: chrX:24365958-24365581 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 31

Conread position: 36-302
Cow position: chrX:9365807-9365544 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 110

Conread position: 36-308
Cow position: chrX:48044644-48044378 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 191
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 46, 34

Conread position: 36-402
Cow position: chrX:40826886-40826504 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 31, 5

Conread position: 37-302
Cow position: chrX:45113489-45113753 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 18

Conread position: 38-409
Cow position: chrX:41526651-41526288 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 75

Conread position: 39-211
Cow position: chrX:36723220-36723049 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 123

Conread position: 39-224
Cow position: chrX:48243590-48243413 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 39-283
Cow position: chrX:21566273-21566520 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 39-304
Cow position: chrX:5017543-5017288 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 39-305
Cow position: chrX:7161931-7162191 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 39-315
Cow position: chrX:7695619-7695893 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 124

Conread position: 39-327
Cow position: chrX:38728608-38728892 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 45, 129

Conread position: 39-380
Cow position: chrX:45875262-45875609 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 115

Conread position: 39-381
Cow position: chrX:40685460-40685109 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 39-389
Cow position: chrX:18204592-18204238 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 46, 116

Conread position: 39-393
Cow position: chrX:43115022-43115381 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 104

Conread position: 39-405
Cow position: chrX:5118631-5118252 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 95

Conread position: 39-405
Cow position: chrX:46547006-46546626 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 79

Conread position: 39-409
Cow position: chrX:26493766-26493401 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 244
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 226

Conread position: 39-413
Cow position: chrX:5919367-5919739 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 76

Conread position: 39-415
Cow position: chrX:45976791-45977180 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 41-362
Cow position: chrX:31294684-31294371 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 193, 48

Conread position: 42-251
Cow position: chrX:19003174-19003374 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 110, 0

Conread position: 42-266
Cow position: chrX:40692877-40692655 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 50, 62

Conread position: 42-301
Cow position: chrX:11851795-11851548 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 191, 130

Conread position: 42-408
Cow position: chrX:31729317-31729682 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 50

Conread position: 42-418
Cow position: chrX:34505173-34504797 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 69

Conread position: 46-274
Cow position: chrX:27946181-27945950 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 107

Conread position: 46-274
Cow position: chrX:44744939-44744714 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 158

Conread position: 46-284
Cow position: chrX:6656264-6656496 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 187, 39

Conread position: 46-407
Cow position: chrX:40320283-40320655 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 37, 96

Conread position: 48-392
Cow position: chrX:26881688-26881331 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 310

Conread position: 49-413
Cow position: chrX:4403195-4403570 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 267
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 73

Conread position: 50-225
Cow position: chrX:28845714-28845887 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 12

Conread position: 50-302
Cow position: chrX:36515008-36514760 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 184, 12

Conread position: 50-315
Cow position: chrX:5679684-5679427 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 36, 84

Conread position: 50-403
Cow position: chrX:34315407-34315774 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 35

Conread position: 52-412
Cow position: chrX:46291023-46291388 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 15

Conread position: 53-332
Cow position: chrX:6265712-6265436 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 116, 19

Conread position: 54-394
Cow position: chrX:42927933-42927597 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 106

Conread position: 55-158
Cow position: chrX:32747570-32747674 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 55-393
Cow position: chrX:29229896-29230239 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 96

Conread position: 55-407
Cow position: chrX:9651138-9650780 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 69

Conread position: 55-411
Cow position: chrX:30338055-30337705 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 35

Conread position: 55-411
Cow position: chrX:33539052-33539399 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 152, 73

Conread position: 55-416
Cow position: chrX:38654543-38654175 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 251, 47

Conread position: 56-401
Cow position: chrX:34222598-34222944 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 239
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 24, 109

Conread position: 57-255
Cow position: chrX:4992127-4991928 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 14, 69

Conread position: 57-301
Cow position: chrX:43567811-43568050 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 174, 109

Conread position: 57-302
Cow position: chrX:29194123-29194362 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 174, 59

Conread position: 57-314
Cow position: chrX:23940136-23939905 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 24

Conread position: 57-411
Cow position: chrX:17949601-17949245 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 100

Conread position: 57-421
Cow position: chrX:33654958-33654580 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 268
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 21, 105

Conread position: 58-303
Cow position: chrX:45670117-45670355 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 176, 25

Conread position: 59-211
Cow position: chrX:8326651-8326799 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 61-212
Cow position: chrX:35848454-35848605 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 55

Conread position: 64-413
Cow position: chrX:47345230-47345580 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 91

Conread position: 66-309
Cow position: chrX:16348672-16348433 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 14, 162

Conread position: 66-419
Cow position: chrX:34837156-34836819 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 40

Conread position: 66-421
Cow position: chrX:40336798-40337171 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 251
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 9

Conread position: 67-390
Cow position: chrX:21327802-21328143 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 232

Conread position: 69-393
Cow position: chrX:40283026-40283342 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 10, 99

Conread position: 70-263
Cow position: chrX:44090674-44090871 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 73

Conread position: 70-386
Cow position: chrX:10516158-10516479 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 83, 35

Conread position: 70-391
Cow position: chrX:31515071-31515398 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 66

Conread position: 71-261
Cow position: chrX:48201199-48201384 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 155, 90

Conread position: 72-302
Cow position: chrX:29549644-29549419 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 90

Conread position: 72-419
Cow position: chrX:12095870-12095512 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 90

Conread position: 73-377
Cow position: chrX:38208637-38208338 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 124, 21

Conread position: 73-389
Cow position: chrX:38560462-38560778 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 75

Conread position: 73-413
Cow position: chrX:5063158-5063484 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 229
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 161, 63

Conread position: 74-400
Cow position: chrX:20168464-20168792 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 99

Conread position: 76-297
Cow position: chrX:19162432-19162214 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 111

Conread position: 76-325
Cow position: chrX:37129177-37129425 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 158, 30

Conread position: 76-393
Cow position: chrX:45648781-45649104 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 153, 44

Conread position: 76-406
Cow position: chrX:1466069-1466407 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 86

Conread position: 77-389
Cow position: chrX:918818-918501 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 85

Conread position: 77-393
Cow position: chrX:29050156-29050474 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 154

Conread position: 77-398
Cow position: chrX:4296910-4296585 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 156, 76

Conread position: 77-402
Cow position: chrX:27261097-27261431 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 36

Conread position: 79-308
Cow position: chrX:41271087-41270848 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 79-399
Cow position: chrX:33205053-33204754 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 154, 66

Conread position: 79-409
Cow position: chrX:48071072-48071413 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 228
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 61

Conread position: 81-415
Cow position: chrX:35590844-35590500 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 219
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 152, 93

Conread position: 82-314
Cow position: chrX:23562549-23562776 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 149, 48

Conread position: 82-390
Cow position: chrX:40680525-40680844 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 82-403
Cow position: chrX:6559531-6559214 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 151, 72

Conread position: 83-250
Cow position: chrX:44568998-44569164 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 80

Conread position: 84-342
Cow position: chrX:23113194-23113461 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 34

Conread position: 85-377
Cow position: chrX:41192625-41192905 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 83, 43

Conread position: 86-314
Cow position: chrX:5135607-5135376 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 145, 82

Conread position: 87-307
Cow position: chrX:18273139-18272922 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 145, 0

Conread position: 88-385
Cow position: chrX:39220000-39220312 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 148, 35

Conread position: 89-402
Cow position: chrX:22115396-22115073 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 74

Conread position: 89-415
Cow position: chrX:5134394-5134724 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 26, 8

Conread position: 89-418
Cow position: chrX:22283753-22284096 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 53

Conread position: 90-356
Cow position: chrX:4515606-4515880 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 77

Conread position: 90-408
Cow position: chrX:4153113-4152797 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 218

Conread position: 93-404
Cow position: chrX:19469575-19469275 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 28

Conread position: 95-385
Cow position: chrX:1088209-1087924 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 35

Conread position: 95-406
Cow position: chrX:38321460-38321139 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 63, 308

Conread position: 98-279
Cow position: chrX:41111651-41111825 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 135, 64

Conread position: 102-231
Cow position: chrX:17301375-17301246 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 59

Conread position: 103-232
Cow position: chrX:5677957-5677829 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 64

Conread position: 103-377
Cow position: chrX:44703137-44702849 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 62

Conread position: 105-315
Cow position: chrX:19097285-19097075 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 109, 63

Conread position: 106-259
Cow position: chrX:43973482-43973634 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 79

Conread position: 106-322
Cow position: chrX:12082387-12082172 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 61, 0

Conread position: 106-392
Cow position: chrX:4109128-4109416 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 127, 48

Conread position: 106-393
Cow position: chrX:25036925-25037224 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 55

Conread position: 106-399
Cow position: chrX:296333-296629 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 54, 119

Conread position: 106-406
Cow position: chrX:13121868-13122188 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 48

Conread position: 106-418
Cow position: chrX:20957186-20957494 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 59

Conread position: 107-404
Cow position: chrX:7648462-7648170 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 125, 47

Conread position: 108-302
Cow position: chrX:46429881-46429687 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 17

Conread position: 108-418
Cow position: chrX:39352720-39353028 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 45, 99

Conread position: 110-264
Cow position: chrX:13146923-13147075 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 123, 44

Conread position: 110-377
Cow position: chrX:1360028-1360298 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 44

Conread position: 110-409
Cow position: chrX:30271-30580 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 56

Conread position: 111-315
Cow position: chrX:31627038-31626832 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 127

Conread position: 112-304
Cow position: chrX:32978133-32977952 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 113-315
Cow position: chrX:40532097-40531898 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 18

Conread position: 113-400
Cow position: chrX:44339379-44339080 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 187, 114

Conread position: 113-409
Cow position: chrX:6541791-6541488 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 53

Conread position: 114-378
Cow position: chrX:47061338-47061603 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 55

Conread position: 115-397
Cow position: chrX:43426239-43426506 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 196

Conread position: 116-390
Cow position: chrX:16984574-16984864 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 179

Conread position: 116-415
Cow position: chrX:35985766-35986069 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 51

Conread position: 118-301
Cow position: chrX:29115661-29115837 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 163, 43

Conread position: 119-315
Cow position: chrX:19943286-19943091 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 112, 131

Conread position: 119-393
Cow position: chrX:22393035-22392755 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 47

Conread position: 123-380
Cow position: chrX:4645957-4645695 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 111, 42

Conread position: 123-413
Cow position: chrX:27306407-27306689 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 44

Conread position: 123-416
Cow position: chrX:44759991-44759684 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 43

Conread position: 124-299
Cow position: chrX:29585076-29585248 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 36

Conread position: 127-385
Cow position: chrX:24749046-24749311 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 181, 35

Conread position: 131-304
Cow position: chrX:29553248-29553419 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 12

Conread position: 131-402
Cow position: chrX:11326137-11325868 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 31

Conread position: 131-405
Cow position: chrX:19394515-19394797 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 31

Conread position: 131-411
Cow position: chrX:42893880-42894172 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 136-405
Cow position: chrX:41941594-41941866 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 37

Conread position: 136-420
Cow position: chrX:17956663-17956948 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 98, 26

Conread position: 137-413
Cow position: chrX:4289408-4289687 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 171

Conread position: 139-315
Cow position: chrX:23498707-23498535 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 139-389
Cow position: chrX:10305377-10305143 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 0

Conread position: 141-302
Cow position: chrX:20743575-20743736 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 32

Conread position: 147-409
Cow position: chrX:17966322-17966568 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 87, 21

Conread position: 149-402
Cow position: chrX:24633664-24633927 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 85, 10

Conread position: 153-315
Cow position: chrX:36848596-36848434 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 44, 139

Conread position: 153-416
Cow position: chrX:16836303-16836041 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 14

Conread position: 159-385
Cow position: chrX:27075063-27074827 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 160-414
Cow position: chrX:32943088-32942828 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 6, 208

Conread position: 160-415
Cow position: chrX:26205459-26205204 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 73, 147

Conread position: 161-315
Cow position: chrX:42160617-42160768 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 161-393
Cow position: chrX:4466957-4467183 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 186
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 73, 147

Conread position: 162-377
Cow position: chrX:45383054-45382845 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 194, 146

Conread position: 162-389
Cow position: chrX:45699980-45699752 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 72

Conread position: 163-420
Cow position: chrX:30672404-30672124 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 165-393
Cow position: chrX:28940231-28940476 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 8, 0

Conread position: 165-412
Cow position: chrX:42479827-42480075 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 148

Conread position: 165-417
Cow position: chrX:27668964-27668708 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 186

Conread position: 166-315
Cow position: chrX:12191755-12191905 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 78

Conread position: 167-402
Cow position: chrX:39290355-39290596 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 168-385
Cow position: chrX:11653761-11653991 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 168-386
Cow position: chrX:29478721-29478947 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 138, 0

Conread position: 168-389
Cow position: chrX:38587846-38587617 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 168-410
Cow position: chrX:42331275-42331518 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 44, 150

Conread position: 168-418
Cow position: chrX:32208825-32208569 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 95

Conread position: 169-376
Cow position: chrX:46070174-46069970 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 140

Conread position: 171-303
Cow position: chrX:29501881-29501751 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 61, 30

Conread position: 172-406
Cow position: chrX:2935958-2936201 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 172-416
Cow position: chrX:12972682-12972930 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 157

Conread position: 173-391
Cow position: chrX:19761756-19761979 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 174-408
Cow position: chrX:23088861-23089081 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 165, 9

Conread position: 175-389
Cow position: chrX:10252194-10251974 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 56

Conread position: 176-409
Cow position: chrX:11762996-11762762 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 132

Conread position: 181-393
Cow position: chrX:16324004-16323783 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 125, 52

Conread position: 181-394
Cow position: chrX:24054681-24054895 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 130

Conread position: 181-405
Cow position: chrX:31744995-31744769 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 30, 131

Conread position: 181-409
Cow position: chrX:4559749-4559983 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 136, 37

Conread position: 181-409
Cow position: chrX:35285183-35285420 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 220

Conread position: 181-414
Cow position: chrX:4328173-4327930 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 110

Conread position: 182-400
Cow position: chrX:35392283-35392065 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 134, 54

Conread position: 183-302
Cow position: chrX:23266427-23266547 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 183-393
Cow position: chrX:29467766-29467549 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 166
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 184-384
Cow position: chrX:41862377-41862578 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 50, 29

Conread position: 187-416
Cow position: chrX:32747744-32747973 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 134

Conread position: 188-314
Cow position: chrX:34508561-34508688 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 189-304
Cow position: chrX:41164632-41164745 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 189-334
Cow position: chrX:28098344-28098491 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 141

Conread position: 189-401
Cow position: chrX:20583684-20583899 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 206

Conread position: 189-401
Cow position: chrX:31479989-31480203 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 57

Conread position: 190-406
Cow position: chrX:5026275-5026496 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 44, 0

Conread position: 190-414
Cow position: chrX:19717540-19717762 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 131, 122

Conread position: 190-415
Cow position: chrX:32877356-32877126 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 207

Conread position: 191-405
Cow position: chrX:20340623-20340411 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 118

Conread position: 191-415
Cow position: chrX:35658819-35659048 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 126, 42

Conread position: 192-383
Cow position: chrX:44991392-44991195 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 40, 61

Conread position: 192-385
Cow position: chrX:35383015-35382818 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 60

Conread position: 193-301
Cow position: chrX:4617376-4617267 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 193-328
Cow position: chrX:35387902-35387767 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 116, 40

Conread position: 194-384
Cow position: chrX:35681589-35681790 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 195-411
Cow position: chrX:32866899-32867120 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 195-414
Cow position: chrX:51872-51653 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 28

Conread position: 197-314
Cow position: chrX:21573599-21573715 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 69

Conread position: 197-401
Cow position: chrX:23359085-23358877 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 167
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 120, 36

Conread position: 199-389
Cow position: chrX:2314591-2314390 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 199-390
Cow position: chrX:40046547-40046334 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 102, 34

Conread position: 201-303
Cow position: chrX:29331965-29331862 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 201-407
Cow position: chrX:41453332-41453545 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 201-411
Cow position: chrX:8326934-8327157 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 202-392
Cow position: chrX:41858850-41858653 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 32, 9

Conread position: 203-389
Cow position: chrX:23471834-23471640 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 0

Conread position: 203-402
Cow position: chrX:4091956-4092160 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 194

Conread position: 203-402
Cow position: chrX:23136772-23136974 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 33, 115

Conread position: 203-403
Cow position: chrX:37749951-37749751 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 113, 174

Conread position: 206-402
Cow position: chrX:5487897-5487707 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 151, 18

Conread position: 206-408
Cow position: chrX:34991399-34991606 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 28, 191

Conread position: 206-412
Cow position: chrX:27270410-27270618 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 28, 159

Conread position: 206-416
Cow position: chrX:17498357-17498580 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 206-421
Cow position: chrX:44995533-44995760 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 209-393
Cow position: chrX:16556179-16555991 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 64

Conread position: 209-393
Cow position: chrX:37752068-37751877 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 121

Conread position: 210-322
Cow position: chrX:11578610-11578500 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 99

Conread position: 214-392
Cow position: chrX:46068716-46068533 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 165

Conread position: 214-413
Cow position: chrX:6389124-6389330 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 47

Conread position: 214-416
Cow position: chrX:1960382-1960169 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 215-393
Cow position: chrX:42875256-42875441 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 215-410
Cow position: chrX:20666857-20666654 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 19, 105

Conread position: 216-409
Cow position: chrX:1101602-1101798 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 17, 77

Conread position: 217-420
Cow position: chrX:10415207-10414994 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 74

Conread position: 221-403
Cow position: chrX:48372445-48372260 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 56

Conread position: 223-389
Cow position: chrX:25925590-25925428 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 64

Conread position: 224-390
Cow position: chrX:31827791-31827626 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 93

Conread position: 224-402
Cow position: chrX:11602428-11602247 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 6

Conread position: 224-410
Cow position: chrX:11529399-11529588 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 9

Conread position: 225-409
Cow position: chrX:1102074-1102262 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 91, 8

Conread position: 226-397
Cow position: chrX:27170794-27170971 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 87

Conread position: 227-402
Cow position: chrX:42086884-42087068 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 227-413
Cow position: chrX:41199280-41199471 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 7, 173

Conread position: 230-393
Cow position: chrX:17525807-17525645 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 136
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 230-407
Cow position: chrX:231958-231779 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 85, 132

Conread position: 230-419
Cow position: chrX:14135738-14135929 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 167

Conread position: 232-411
Cow position: chrX:41010960-41011141 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 73

Conread position: 233-388
Cow position: chrX:39642559-39642401 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 84, 36

Conread position: 233-389
Cow position: chrX:25232060-25232210 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 73

Conread position: 233-395
Cow position: chrX:6480533-6480361 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 233-401
Cow position: chrX:29682048-29681878 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 82, 58

Conread position: 233-411
Cow position: chrX:26882017-26881829 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 233-417
Cow position: chrX:1938077-1938267 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 165

Conread position: 234-393
Cow position: chrX:3494981-3494816 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 25

Conread position: 235-385
Cow position: chrX:40263746-40263892 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 236-410
Cow position: chrX:6274279-6274104 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 7

Conread position: 236-417
Cow position: chrX:30042024-30041847 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 7

Conread position: 237-418
Cow position: chrX:41215389-41215585 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 240-383
Cow position: chrX:25420401-25420546 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 124, 70

Conread position: 240-385
Cow position: chrX:4486954-4486800 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 244-386
Cow position: chrX:43059177-43059031 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 244-411
Cow position: chrX:36961790-36961960 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 63

Conread position: 244-412
Cow position: chrX:26720608-26720441 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 73, 147

Conread position: 245-393
Cow position: chrX:35029851-35029704 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 49

Conread position: 245-418
Cow position: chrX:1571514-1571339 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 84

Conread position: 246-414
Cow position: chrX:30958806-30958980 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 153

Conread position: 247-403
Cow position: chrX:17744700-17744863 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 249-395
Cow position: chrX:31279845-31279693 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 254-402
Cow position: chrX:37176958-37177109 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 62, 109

Conread position: 274-394
Cow position: chrX:38727034-38726911 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 67

Show alignments to all cow chromosomes.