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Cow genome map

           
Conread name:
           
rcmu38_p21.y1
        

               
Conread position:
               
98-332
               

               
Cow position:
               
chrX:37955861-37956099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
122-329
               

               
Cow position:
               
chrX:36961753-36961960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
126-310
               

               
Cow position:
               
chrX:17525825-17525645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
10, 16
               

               
Conread position:
               
128-306
               

               
Cow position:
               
chrX:37867297-37867482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
128-310
               

               
Cow position:
               
chrX:41166781-41166597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
152, 90
               

               
Conread position:
               
129-305
               

               
Cow position:
               
chrX:13923910-13924088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
151, 9
               

               
Conread position:
               
129-310
               

               
Cow position:
               
chrX:12795-12975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
147, 47
               

               
Conread position:
               
130-322
               

               
Cow position:
               
chrX:46079131-46079332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
100, 69
               

               
Conread position:
               
131-294
               

               
Cow position:
               
chrX:39094276-39094117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
131-335
               

               
Cow position:
               
chrX:12979786-12979577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
99, 7
               

               
Conread position:
               
133-231
               

               
Cow position:
               
chrX:4615961-4615865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
133-243
               

               
Cow position:
               
chrX:17726024-17726135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
133-249
               

               
Cow position:
               
chrX:38006721-38006603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
133-295
               

               
Cow position:
               
chrX:47061445-47061603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 87
               

               
Conread position:
               
133-302
               

               
Cow position:
               
chrX:11653819-11653991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
133-302
               

               
Cow position:
               
chrX:15007100-15006935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
133-302
               

               
Cow position:
               
chrX:21986242-21986077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
143, 87
               

               
Conread position:
               
133-304
               

               
Cow position:
               
chrX:34222765-34222935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
133-306
               

               
Cow position:
               
chrX:23471817-23471640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
133-307
               

               
Cow position:
               
chrX:19469457-19469284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
145, 80
               

               
Conread position:
               
133-307
               

               
Cow position:
               
chrX:42381063-42380883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
133-309
               

               
Cow position:
               
chrX:11656130-11656309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
133-309
               

               
Cow position:
               
chrX:41858833-41858653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
67, 83
               

               
Conread position:
               
133-310
               

               
Cow position:
               
chrX:27415531-27415355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
147, 102
               

               
Conread position:
               
133-310
               

               
Cow position:
               
chrX:32910153-32910328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
102, 43
               

               
Conread position:
               
133-310
               

               
Cow position:
               
chrX:48822293-48822110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
133-314
               

               
Cow position:
               
chrX:39290408-39290591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
142, 80
               

               
Conread position:
               
133-317
               

               
Cow position:
               
chrX:37781060-37780870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
133-317
               

               
Cow position:
               
chrX:48372446-48372263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
147, 61
               

               
Conread position:
               
133-323
               

               
Cow position:
               
chrX:46533256-46533057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
133-325
               

               
Cow position:
               
chrX:9650975-9650780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
133-328
               

               
Cow position:
               
chrX:47345376-47345580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
133-330
               

               
Cow position:
               
chrX:5919541-5919739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
133-333
               

               
Cow position:
               
chrX:34505000-34504797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
133-334
               

               
Cow position:
               
chrX:6599733-6599520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
104, 193
               

               
Conread position:
               
133-334
               

               
Cow position:
               
chrX:20339843-20339637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
97, 48
               

               
Conread position:
               
133-334
               

               
Cow position:
               
chrX:31436523-31436726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 102
               

               
Conread position:
               
134-231
               

               
Cow position:
               
chrX:29501834-29501737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-234
               

               
Cow position:
               
chrX:5135473-5135370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
134-234
               

               
Cow position:
               
chrX:31312079-31312179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-240
               

               
Cow position:
               
chrX:34508594-34508700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-272
               

               
Cow position:
               
chrX:4515741-4515879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
134-294
               

               
Cow position:
               
chrX:30840596-30840757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
132, 101
               

               
Conread position:
               
134-298
               

               
Cow position:
               
chrX:40685278-40685109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
134-302
               

               
Cow position:
               
chrX:22482640-22482465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
134-305
               

               
Cow position:
               
chrX:34991414-34991588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
134-306
               

               
Cow position:
               
chrX:20583716-20583888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
134-306
               

               
Cow position:
               
chrX:33539220-33539379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
134-306
               

               
Cow position:
               
chrX:34376992-34377167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
134-306
               

               
Cow position:
               
chrX:45502196-45502363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
134-307
               

               
Cow position:
               
chrX:5026306-5026480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
134-307
               

               
Cow position:
               
chrX:5134521-5134703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 46
               

               
Conread position:
               
134-307
               

               
Cow position:
               
chrX:9201598-9201772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
142, 100
               

               
Conread position:
               
134-308
               

               
Cow position:
               
chrX:34532570-34532741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
94, 133
               

               
Conread position:
               
134-309
               

               
Cow position:
               
chrX:1466212-1466394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chrX:4467017-4467183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 92
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chrX:6544307-6544477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chrX:13913125-13913307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 81
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chrX:20666851-20666670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chrX:22392934-22392755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 81
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chrX:34314074-34314253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chrX:34837014-34836840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
147, 105
               

               
Conread position:
               
134-311
               

               
Cow position:
               
chrX:24054727-24054895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 91
               

               
Conread position:
               
134-311
               

               
Cow position:
               
chrX:33855169-33854992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
169, 43
               

               
Conread position:
               
134-311
               

               
Cow position:
               
chrX:37072439-37072619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
134-311
               

               
Cow position:
               
chrX:42927774-42927597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
145, 115
               

               
Conread position:
               
134-313
               

               
Cow position:
               
chrX:30337904-30337720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
134-314
               

               
Cow position:
               
chrX:11326047-11325873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
142, 58
               

               
Conread position:
               
134-317
               

               
Cow position:
               
chrX:45968198-45968376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
93, 139
               

               
Conread position:
               
134-321
               

               
Cow position:
               
chrX:23359061-23358874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 17
               

               
Conread position:
               
134-322
               

               
Cow position:
               
chrX:27145654-27145844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
144, 101
               

               
Conread position:
               
134-326
               

               
Cow position:
               
chrX:2936007-2936201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
141, 86
               

               
Conread position:
               
134-327
               

               
Cow position:
               
chrX:32866925-32867120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
144, 106
               

               
Conread position:
               
134-328
               

               
Cow position:
               
chrX:27306504-27306689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
144, 92
               

               
Conread position:
               
134-329
               

               
Cow position:
               
chrX:27431868-27431675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
134-333
               

               
Cow position:
               
chrX:4289494-4289687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
144, 91
               

               
Conread position:
               
135-282
               

               
Cow position:
               
chrX:169495-169340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
135-302
               

               
Cow position:
               
chrX:17795032-17795203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
135-306
               

               
Cow position:
               
chrX:38560610-38560778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 90
               

               
Conread position:
               
135-310
               

               
Cow position:
               
chrX:28940293-28940476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
135-313
               

               
Cow position:
               
chrX:29542166-29541993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
135-330
               

               
Cow position:
               
chrX:32943025-32942828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
75, 145
               

               
Conread position:
               
136-306
               

               
Cow position:
               
chrX:17966393-17966552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
136-309
               

               
Cow position:
               
chrX:26881513-26881331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 135
               

               
Conread position:
               
136-310
               

               
Cow position:
               
chrX:2551143-2551308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
136-310
               

               
Cow position:
               
chrX:19018779-19018595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
136-310
               

               
Cow position:
               
chrX:42875264-42875441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
136-317
               

               
Cow position:
               
chrX:42235472-42235288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
99, 85
               

               
Conread position:
               
136-323
               

               
Cow position:
               
chrX:42461566-42461381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
136-324
               

               
Cow position:
               
chrX:14951301-14951106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
136-330
               

               
Cow position:
               
chrX:8925751-8925932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 69
               

               
Conread position:
               
136-331
               

               
Cow position:
               
chrX:26205396-26205204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
168, 90
               

               
Conread position:
               
137-279
               

               
Cow position:
               
chrX:13647732-13647586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
137-306
               

               
Cow position:
               
chrX:918664-918501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
137-313
               

               
Cow position:
               
chrX:5915241-5915425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 180
               

               
Conread position:
               
137-326
               

               
Cow position:
               
chrX:39489138-39488963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
138-242
               

               
Cow position:
               
chrX:878326-878222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
138-257
               

               
Cow position:
               
chrX:23113339-23113459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
138-288
               

               
Cow position:
               
chrX:35542941-35543094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
138-301
               

               
Cow position:
               
chrX:41862417-41862578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
138-302
               

               
Cow position:
               
chrX:14275689-14275527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
158, 97
               

               
Conread position:
               
138-302
               

               
Cow position:
               
chrX:38642303-38642466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
138-303
               

               
Cow position:
               
chrX:10516307-10516479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
138-306
               

               
Cow position:
               
chrX:9252109-9251935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
138-306
               

               
Cow position:
               
chrX:13177422-13177256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
138-306
               

               
Cow position:
               
chrX:19394607-19394783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
138-307
               

               
Cow position:
               
chrX:16984695-16984864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
139, 57
               

               
Conread position:
               
138-307
               

               
Cow position:
               
chrX:31480025-31480195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
138-307
               

               
Cow position:
               
chrX:31827790-31827626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
138-307
               

               
Cow position:
               
chrX:40531989-40531797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
138-308
               

               
Cow position:
               
chrX:19761808-19761979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
139, 103
               

               
Conread position:
               
138-310
               

               
Cow position:
               
chrX:20584382-20584544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
143, 85
               

               
Conread position:
               
138-310
               

               
Cow position:
               
chrX:29467724-29467549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
140, 97
               

               
Conread position:
               
138-310
               

               
Cow position:
               
chrX:41871121-41871289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
141, 89
               

               
Conread position:
               
138-311
               

               
Cow position:
               
chrX:4996639-4996822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
138-312
               

               
Cow position:
               
chrX:17293009-17293191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
138-314
               

               
Cow position:
               
chrX:22115263-22115078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
138-317
               

               
Cow position:
               
chrX:44660536-44660356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
76, 148
               

               
Conread position:
               
138-324
               

               
Cow position:
               
chrX:5118444-5118252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
138-326
               

               
Cow position:
               
chrX:34411900-34412094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
106, 182
               

               
Conread position:
               
138-327
               

               
Cow position:
               
chrX:296445-296639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
138-328
               

               
Cow position:
               
chrX:12437216-12437033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
140, 15
               

               
Conread position:
               
138-329
               

               
Cow position:
               
chrX:27206851-27207045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 122
               

               
Conread position:
               
138-329
               

               
Cow position:
               
chrX:30962823-30962622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
138-330
               

               
Cow position:
               
chrX:17231789-17231991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
138-330
               

               
Cow position:
               
chrX:44656903-44656719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
138-331
               

               
Cow position:
               
chrX:20345504-20345706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
138-331
               

               
Cow position:
               
chrX:47855035-47855229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
138-332
               

               
Cow position:
               
chrX:35985872-35986069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
91, 62
               

               
Conread position:
               
138-332
               

               
Cow position:
               
chrX:46793692-46793493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
126, 105
               

               
Conread position:
               
138-333
               

               
Cow position:
               
chrX:4169977-4169771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
128, 67
               

               
Conread position:
               
138-333
               

               
Cow position:
               
chrX:26979735-26979534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
79, 29
               

               
Conread position:
               
138-333
               

               
Cow position:
               
chrX:27668904-27668708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 126
               

               
Conread position:
               
138-333
               

               
Cow position:
               
chrX:28067904-28068108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
138-333
               

               
Cow position:
               
chrX:33000959-33001155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
138-333
               

               
Cow position:
               
chrX:35885673-35885476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
138, 97
               

               
Conread position:
               
138-334
               

               
Cow position:
               
chrX:16836232-16836041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
140, 14
               

               
Conread position:
               
138-335
               

               
Cow position:
               
chrX:20887587-20887396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
69, 103
               

               
Conread position:
               
138-335
               

               
Cow position:
               
chrX:20957292-20957494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 165
               

               
Conread position:
               
138-335
               

               
Cow position:
               
chrX:32208768-32208569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
139-302
               

               
Cow position:
               
chrX:22074851-22075019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
139-307
               

               
Cow position:
               
chrX:12972738-12972907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 82
               

               
Conread position:
               
139-313
               

               
Cow position:
               
chrX:4632802-4632618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
139-315
               

               
Cow position:
               
chrX:27170794-27170972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 138
               

               
Conread position:
               
139-326
               

               
Cow position:
               
chrX:8869347-8869158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
75, 177
               

               
Conread position:
               
139-327
               

               
Cow position:
               
chrX:40826696-40826500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
139-335
               

               
Cow position:
               
chrX:15545937-15546140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
92, 79
               

               
Conread position:
               
140-243
               

               
Cow position:
               
chrX:28098382-28098484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
140-243
               

               
Cow position:
               
chrX:43730168-43730065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
140-271
               

               
Cow position:
               
chrX:40543465-40543338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
140-292
               

               
Cow position:
               
chrX:31252464-31252613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
140-294
               

               
Cow position:
               
chrX:10237857-10237697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 78
               

               
Conread position:
               
140-294
               

               
Cow position:
               
chrX:27228182-27228345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
140-294
               

               
Cow position:
               
chrX:41810112-41809959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 38
               

               
Conread position:
               
140-295
               

               
Cow position:
               
chrX:34420790-34420953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
140-295
               

               
Cow position:
               
chrX:34543840-34544003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
140-297
               

               
Cow position:
               
chrX:42282633-42282796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
140-298
               

               
Cow position:
               
chrX:47079683-47079847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
140-301
               

               
Cow position:
               
chrX:35681623-35681790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
140-302
               

               
Cow position:
               
chrX:8326960-8327129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
140-302
               

               
Cow position:
               
chrX:14973690-14973533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
140, 85
               

               
Conread position:
               
140-302
               

               
Cow position:
               
chrX:34270617-34270785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 115
               

               
Conread position:
               
140-302
               

               
Cow position:
               
chrX:39220135-39220312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
140-303
               

               
Cow position:
               
chrX:41526472-41526309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
136, 37
               

               
Conread position:
               
140-304
               

               
Cow position:
               
chrX:28106903-28107072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 58
               

               
Conread position:
               
140-304
               

               
Cow position:
               
chrX:42836237-42836407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
68, 64
               

               
Conread position:
               
140-305
               

               
Cow position:
               
chrX:20168614-20168782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 74
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:2314563-2314390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
69, 65
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:4399182-4399346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:11762945-11762783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
141, 80
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:12290775-12290946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 57
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:16763869-16763702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
140, 95
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:24331832-24332005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:27393970-27393790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:27442483-27442310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:35409808-35409980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:36283396-36283568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:38549503-38549675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 111
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:38587787-38587617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:41454898-41454725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:43150487-43150659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
140-306
               

               
Cow position:
               
chrX:44054858-44055031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chrX:161468-161629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chrX:8642102-8642274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chrX:21327969-21328143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chrX:25035326-25035152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chrX:34315575-34315756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chrX:38964164-38964326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 65
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chrX:41199280-41199451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
39, 67
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chrX:42479889-42480056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 81
               

               
Conread position:
               
140-307
               

               
Cow position:
               
chrX:46532439-46532261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
140-309
               

               
Cow position:
               
chrX:1499721-1499885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
140-309
               

               
Cow position:
               
chrX:6407600-6407774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
140-309
               

               
Cow position:
               
chrX:32877319-32877148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
140-309
               

               
Cow position:
               
chrX:46068703-46068533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
138, 87
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:5097743-5097562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:8759682-8759857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:16556161-16555991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
138, 46
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:17524328-17524151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:29230055-29230239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:31442773-31442607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
139, 89
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:34441398-34441221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:34565342-34565518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 25
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:34792255-34792091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:36367879-36367702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:36976007-36976182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
94, 158
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:40035384-40035210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
90, 158
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:43008665-43008844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:43115206-43115381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:45110712-45110883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
141, 95
               

               
Conread position:
               
140-310
               

               
Cow position:
               
chrX:45429966-45429799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
137, 84
               

               
Conread position:
               
140-311
               

               
Cow position:
               
chrX:42331340-42331506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
140-312
               

               
Cow position:
               
chrX:908002-908175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
140-312
               

               
Cow position:
               
chrX:4152975-4152810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
141, 90
               

               
Conread position:
               
140-313
               

               
Cow position:
               
chrX:16762827-16763002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 68
               

               
Conread position:
               
140-313
               

               
Cow position:
               
chrX:42893982-42894157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
139, 86
               

               
Conread position:
               
140-314
               

               
Cow position:
               
chrX:3806738-3806915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
141, 86
               

               
Conread position:
               
140-314
               

               
Cow position:
               
chrX:41453358-41453535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
140-314
               

               
Cow position:
               
chrX:48558802-48558981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 127
               

               
Conread position:
               
140-315
               

               
Cow position:
               
chrX:11781507-11781682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 141
               

               
Conread position:
               
140-315
               

               
Cow position:
               
chrX:31983529-31983341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
140-316
               

               
Cow position:
               
chrX:30824045-30824223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
136, 86
               

               
Conread position:
               
140-316
               

               
Cow position:
               
chrX:42432452-42432276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 22
               

               
Conread position:
               
140-317
               

               
Cow position:
               
chrX:15100039-15100217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
77, 102
               

               
Conread position:
               
140-317
               

               
Cow position:
               
chrX:20678086-20677904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
136, 85
               

               
Conread position:
               
140-317
               

               
Cow position:
               
chrX:24365765-24365583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 41
               

               
Conread position:
               
140-317
               

               
Cow position:
               
chrX:40108462-40108275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
90, 179
               

               
Conread position:
               
140-321
               

               
Cow position:
               
chrX:37752050-37751866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
138, 86
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chrX:11781309-11781492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
76, 57
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chrX:27261247-27261432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
10, 172
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chrX:35276041-35276233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 64
               

               
Conread position:
               
140-323
               

               
Cow position:
               
chrX:41941679-41941866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
99, 117
               

               
Conread position:
               
140-324
               

               
Cow position:
               
chrX:31744948-31744769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
138, 92
               

               
Conread position:
               
140-325
               

               
Cow position:
               
chrX:11633738-11633927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
85, 174
               

               
Conread position:
               
140-325
               

               
Cow position:
               
chrX:27508966-27508778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
140-325
               

               
Cow position:
               
chrX:27705642-27705836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
140-325
               

               
Cow position:
               
chrX:35285229-35285420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 175
               

               
Conread position:
               
140-326
               

               
Cow position:
               
chrX:1719171-1719353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
165, 99
               

               
Conread position:
               
140-327
               

               
Cow position:
               
chrX:1101613-1101798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
138, 65
               

               
Conread position:
               
140-327
               

               
Cow position:
               
chrX:25815845-25815650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
140-328
               

               
Cow position:
               
chrX:27270431-27270618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
41, 126
               

               
Conread position:
               
140-329
               

               
Cow position:
               
chrX:6389137-6389330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
140-329
               

               
Cow position:
               
chrX:41027215-41027408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 170
               

               
Conread position:
               
140-329
               

               
Cow position:
               
chrX:46587878-46588074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
69, 65
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chrX:27446742-27446935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chrX:29601772-29601579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
92, 167
               

               
Conread position:
               
140-330
               

               
Cow position:
               
chrX:46909871-46910060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
138, 95
               

               
Conread position:
               
140-331
               

               
Cow position:
               
chrX:24170673-24170470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
140-332
               

               
Cow position:
               
chrX:4328127-4327930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 38
               

               
Conread position:
               
140-332
               

               
Cow position:
               
chrX:38301865-38302069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chrX:17498378-17498580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
74, 65
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chrX:30133262-30133068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
140-333
               

               
Cow position:
               
chrX:31489576-31489774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
90, 176
               

               
Conread position:
               
140-334
               

               
Cow position:
               
chrX:1960369-1960169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
140-334
               

               
Cow position:
               
chrX:27511484-27511671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
140-334
               

               
Cow position:
               
chrX:34554779-34554979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
68, 64
               

               
Conread position:
               
140-334
               

               
Cow position:
               
chrX:39180177-39179972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
140-334
               

               
Cow position:
               
chrX:41674160-41674353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
140-335
               

               
Cow position:
               
chrX:12095716-12095513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
140-335
               

               
Cow position:
               
chrX:33654788-33654582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
140-335
               

               
Cow position:
               
chrX:38218770-38218968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
50, 173
               

               
Conread position:
               
140-335
               

               
Cow position:
               
chrX:42449958-42449754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
140-335
               

               
Cow position:
               
chrX:45976982-45977179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 172
               

               
Conread position:
               
141-242
               

               
Cow position:
               
chrX:17888366-17888265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
141-277
               

               
Cow position:
               
chrX:23188727-23188593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
141-302
               

               
Cow position:
               
chrX:1122490-1122323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
141-302
               

               
Cow position:
               
chrX:35382979-35382818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
141-302
               

               
Cow position:
               
chrX:47191263-47191098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
141-303
               

               
Cow position:
               
chrX:44339268-44339096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
141-306
               

               
Cow position:
               
chrX:18964772-18964606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
141-306
               

               
Cow position:
               
chrX:28923086-28923240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
141-306
               

               
Cow position:
               
chrX:33466681-33466850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
141-306
               

               
Cow position:
               
chrX:46672534-46672367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chrX:23335919-23335746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
141-309
               

               
Cow position:
               
chrX:4109241-4109416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
141-309
               

               
Cow position:
               
chrX:18812166-18812327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
140, 80
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chrX:51844-51670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chrX:16323961-16323783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chrX:23497634-23497465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
139, 67
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chrX:27175055-27175234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chrX:35268918-35269088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 94
               

               
Conread position:
               
141-310
               

               
Cow position:
               
chrX:42855515-42855695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
141-312
               

               
Cow position:
               
chrX:36356165-36356337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 16
               

               
Conread position:
               
141-312
               

               
Cow position:
               
chrX:38094463-38094291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
138, 80
               

               
Conread position:
               
141-312
               

               
Cow position:
               
chrX:42247125-42246947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
141-314
               

               
Cow position:
               
chrX:11614751-11614911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
141-315
               

               
Cow position:
               
chrX:27074994-27074814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
141-321
               

               
Cow position:
               
chrX:28850780-28850956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
141-325
               

               
Cow position:
               
chrX:37867489-37867682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
141-325
               

               
Cow position:
               
chrX:41878877-41878688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
67, 59
               

               
Conread position:
               
141-326
               

               
Cow position:
               
chrX:31729499-31729682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
141-327
               

               
Cow position:
               
chrX:44040233-44040427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
141-328
               

               
Cow position:
               
chrX:48236876-48237066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
141-331
               

               
Cow position:
               
chrX:32747789-32747973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
141-332
               

               
Cow position:
               
chrX:151958-152161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
95, 61
               

               
Conread position:
               
141-334
               

               
Cow position:
               
chrX:4269007-4268820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
140, 64
               

               
Conread position:
               
141-334
               

               
Cow position:
               
chrX:39352843-39353028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
137, 16
               

               
Conread position:
               
141-335
               

               
Cow position:
               
chrX:14925329-14925528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 173
               

               
Conread position:
               
141-335
               

               
Cow position:
               
chrX:15147140-15146942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
142-279
               

               
Cow position:
               
chrX:31294514-31294371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
142-306
               

               
Cow position:
               
chrX:4091982-4092150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
142-306
               

               
Cow position:
               
chrX:22387192-22387015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
142-309
               

               
Cow position:
               
chrX:40648952-40649133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
142-310
               

               
Cow position:
               
chrX:42760310-42760485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
142-328
               

               
Cow position:
               
chrX:4559792-4559983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
96, 7
               

               
Conread position:
               
142-329
               

               
Cow position:
               
chrX:45598547-45598357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
142-333
               

               
Cow position:
               
chrX:32330224-32330428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
142-334
               

               
Cow position:
               
chrX:42492465-42492263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
143-253
               

               
Cow position:
               
chrX:35019311-35019423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
143-297
               

               
Cow position:
               
chrX:20151915-20152067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
135, 90
               

               
Conread position:
               
143-301
               

               
Cow position:
               
chrX:45759730-45759892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
143-305
               

               
Cow position:
               
chrX:39642564-39642401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
143-306
               

               
Cow position:
               
chrX:13121997-13122172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
143-307
               

               
Cow position:
               
chrX:40680673-40680844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
143-310
               

               
Cow position:
               
chrX:11602424-11602256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
143-311
               

               
Cow position:
               
chrX:13005335-13005170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 131
               

               
Conread position:
               
143-314
               

               
Cow position:
               
chrX:23485580-23485766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
143-322
               

               
Cow position:
               
chrX:40056158-40055983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 132
               

               
Conread position:
               
143-326
               

               
Cow position:
               
chrX:26882021-26881829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
143-328
               

               
Cow position:
               
chrX:7722047-7722224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
143-329
               

               
Cow position:
               
chrX:6274287-6274104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 118
               

               
Conread position:
               
143-335
               

               
Cow position:
               
chrX:14135737-14135929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
132, 168
               

               
Conread position:
               
143-335
               

               
Cow position:
               
chrX:21288549-21288358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 136
               

               
Conread position:
               
144-293
               

               
Cow position:
               
chrX:4768792-4768943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
144-294
               

               
Cow position:
               
chrX:8731153-8731310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
144-302
               

               
Cow position:
               
chrX:6640487-6640648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
91, 56
               

               
Conread position:
               
144-302
               

               
Cow position:
               
chrX:9635131-9634968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
94, 77
               

               
Conread position:
               
144-303
               

               
Cow position:
               
chrX:29478783-29478947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
144-304
               

               
Cow position:
               
chrX:22552919-22552753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
144-306
               

               
Cow position:
               
chrX:10252140-10251974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
144-306
               

               
Cow position:
               
chrX:11589307-11589139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
144-306
               

               
Cow position:
               
chrX:41238295-41238134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
137, 91
               

               
Conread position:
               
144-310
               

               
Cow position:
               
chrX:231958-231794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
144-312
               

               
Cow position:
               
chrX:10278930-10279110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
144-322
               

               
Cow position:
               
chrX:42086887-42087070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
144-332
               

               
Cow position:
               
chrX:47100538-47100342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 173
               

               
Conread position:
               
145-314
               

               
Cow position:
               
chrX:29682050-29681882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
133, 60
               

               
Conread position:
               
145-323
               

               
Cow position:
               
chrX:4750271-4750093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
146-241
               

               
Cow position:
               
chrX:34589004-34589099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
146-302
               

               
Cow position:
               
chrX:1088081-1087924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 95
               

               
Conread position:
               
146-302
               

               
Cow position:
               
chrX:27202632-27202793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
146-305
               

               
Cow position:
               
chrX:33678412-33678243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
146-310
               

               
Cow position:
               
chrX:17956753-17956921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 16
               

               
Conread position:
               
146-312
               

               
Cow position:
               
chrX:6480534-6480361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
146-327
               

               
Cow position:
               
chrX:19717582-19717762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
158, 72
               

               
Conread position:
               
146-327
               

               
Cow position:
               
chrX:26720622-26720441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
146-333
               

               
Cow position:
               
chrX:30042029-30041847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
91, 128
               

               
Conread position:
               
146-335
               

               
Cow position:
               
chrX:44995560-44995759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
147-293
               

               
Cow position:
               
chrX:5679868-5679715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
147-298
               

               
Cow position:
               
chrX:11529406-11529558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
131, 88
               

               
Conread position:
               
147-302
               

               
Cow position:
               
chrX:44798986-44798827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
147-306
               

               
Cow position:
               
chrX:23088915-23089063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
147-310
               

               
Cow position:
               
chrX:5487876-5487716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
128, 86
               

               
Conread position:
               
147-310
               

               
Cow position:
               
chrX:29050310-29050474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
63, 82
               

               
Conread position:
               
147-323
               

               
Cow position:
               
chrX:23136803-23136976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
110, 77
               

               
Conread position:
               
147-326
               

               
Cow position:
               
chrX:4444484-4444674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 174
               

               
Conread position:
               
147-326
               

               
Cow position:
               
chrX:40556396-40556215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 103
               

               
Conread position:
               
147-327
               

               
Cow position:
               
chrX:1102080-1102262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
93, 174
               

               
Conread position:
               
147-331
               

               
Cow position:
               
chrX:35658859-35659048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
147-332
               

               
Cow position:
               
chrX:41010961-41011141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 72
               

               
Conread position:
               
147-332
               

               
Cow position:
               
chrX:44759877-44759684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
147-333
               

               
Cow position:
               
chrX:1938077-1938267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 166
               

               
Conread position:
               
148-302
               

               
Cow position:
               
chrX:24749149-24749311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
148-306
               

               
Cow position:
               
chrX:9451409-9451569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
148-310
               

               
Cow position:
               
chrX:3494981-3494816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
132, 25
               

               
Conread position:
               
148-310
               

               
Cow position:
               
chrX:11670751-11670921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
149-313
               

               
Cow position:
               
chrX:37749920-37749758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
7, 92
               

               
Conread position:
               
149-326
               

               
Cow position:
               
chrX:12197133-12197320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 55
               

               
Conread position:
               
150-313
               

               
Cow position:
               
chrX:35392232-35392069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
127, 78
               

               
Conread position:
               
150-317
               

               
Cow position:
               
chrX:24633761-24633925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 131
               

               
Conread position:
               
153-292
               

               
Cow position:
               
chrX:4366409-4366559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
153-306
               

               
Cow position:
               
chrX:41215391-41215551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
154-293
               

               
Cow position:
               
chrX:39419644-39419506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 81
               

               
Conread position:
               
154-300
               

               
Cow position:
               
chrX:25420401-25420546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
154-302
               

               
Cow position:
               
chrX:4486954-4486800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
154-335
               

               
Cow position:
               
chrX:35509609-35509421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
155-306
               

               
Cow position:
               
chrX:18204392-18204238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
155-313
               

               
Cow position:
               
chrX:16801192-16801031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
155-324
               

               
Cow position:
               
chrX:7351368-7351547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
155-330
               

               
Cow position:
               
chrX:4403388-4403570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
156-310
               

               
Cow position:
               
chrX:45657868-45657703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
156-317
               

               
Cow position:
               
chrX:40336982-40337149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
74, 159
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chrX:34194009-34193832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
157-300
               

               
Cow position:
               
chrX:25441471-25441336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
157-321
               

               
Cow position:
               
chrX:13785149-13784969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 108
               

               
Conread position:
               
157-335
               

               
Cow position:
               
chrX:24277392-24277561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 78
               

               
Conread position:
               
158-303
               

               
Cow position:
               
chrX:43059177-43059031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
158-325
               

               
Cow position:
               
chrX:42506875-42506699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
159-310
               

               
Cow position:
               
chrX:6414116-6414265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
144, 116
               

               
Conread position:
               
159-310
               

               
Cow position:
               
chrX:35029851-35029704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 76
               

               
Conread position:
               
159-334
               

               
Cow position:
               
chrX:1571514-1571339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
159-335
               

               
Cow position:
               
chrX:22283912-22284096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
160-335
               

               
Cow position:
               
chrX:9367392-9367578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
162-314
               

               
Cow position:
               
chrX:17744701-17744857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
162-321
               

               
Cow position:
               
chrX:37717800-37717964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
162-329
               

               
Cow position:
               
chrX:44816736-44816576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
162-331
               

               
Cow position:
               
chrX:30958808-30958980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 151
               

               
Conread position:
               
163-312
               

               
Cow position:
               
chrX:31279845-31279693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
163-322
               

               
Cow position:
               
chrX:47979376-47979543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
164-302
               

               
Cow position:
               
chrX:42311744-42311876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 93
               

               
Conread position:
               
164-335
               

               
Cow position:
               
chrX:17929081-17929259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
165-328
               

               
Cow position:
               
chrX:21171-21332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
64, 109
               

               
Conread position:
               
166-329
               

               
Cow position:
               
chrX:43028314-43028479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
110, 145
               

               
Conread position:
               
167-306
               

               
Cow position:
               
chrX:45699892-45699752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
168-307
               

               
Cow position:
               
chrX:40108259-40108115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
168-315
               

               
Cow position:
               
chrX:37176958-37177104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
168-332
               

               
Cow position:
               
chrX:6907324-6907167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
169-306
               

               
Cow position:
               
chrX:19356548-19356692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
170-310
               

               
Cow position:
               
chrX:1996366-1996217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 35
               

               
Conread position:
               
170-335
               

               
Cow position:
               
chrX:47730568-47730739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
174-311
               

               
Cow position:
               
chrX:38727049-38726911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 67
               

               
Conread position:
               
177-311
               

               
Cow position:
               
chrX:22284783-22284916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
177-331
               

               
Cow position:
               
chrX:46291238-46291388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
178-332
               

               
Cow position:
               
chrX:42216537-42216383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
179-335
               

               
Cow position:
               
chrX:4458449-4458600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 88
               

               
Conread position:
               
182-323
               

               
Cow position:
               
chrX:15534114-15533964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
193-306
               

               
Cow position:
               
chrX:19595631-19595742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
193-328
               

               
Cow position:
               
chrX:4264538-4264669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 82
               
Show alignments to all cow chromosomes.