Cow genome map

Conread name: rcmu39_j5.y1

Conread position: 1-161
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 101

Conread position: 1-169
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 6, 103

Conread position: 1-178
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 6, 92

Conread position: 1-233
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 9, 92

Conread position: 1-236
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 12, 104

Conread position: 1-236
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 9, 103

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 248
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 239
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 14, 99

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 9, 101

Conread position: 1-238
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 9, 91

Conread position: 1-238
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 9, 85

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 182
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 9, 54

Conread position: 1-238
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 95

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 9, 92

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 9, 92

Conread position: 2-178
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 101

Conread position: 4-178
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 11, 92

Conread position: 4-178
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 18

Conread position: 4-232
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 13

Conread position: 4-237
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 0

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 25, 18

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 236
Alignm identity: 175
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 11, 92

Conread position: 4-238
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 0

Conread position: 4-239
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 31, 18

Conread position: 4-239
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 92

Conread position: 5-238
Cow position:
Alignm length: 235
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 48

Conread position: 6-156
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 97

Conread position: 6-179
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 88

Conread position: 6-180
Cow position:
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 6-190
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 25, 97

Conread position: 6-209
Cow position:
Alignm length: 212
Alignm identity: 155
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 97

Conread position: 6-218
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 9, 90

Conread position: 6-231
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 26, 84

Conread position: 6-236
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 25, 84

Conread position: 6-236
Cow position:
Alignm length: 240
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 25, 86

Conread position: 6-236
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 25, 100

Conread position: 6-238
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 85

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 25, 100

Conread position: 6-238
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 28, 80

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 96

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 97

Conread position: 6-238
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 6-238
Cow position:
Alignm length: 242
Alignm identity: 186
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 25, 54

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 25, 85

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 21, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 25, 86

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 97

Conread position: 6-238
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 97

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 25, 86

Conread position: 6-239
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 27, 86

Conread position: 7-239
Cow position:
Alignm length: 241
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 85

Conread position: 8-238
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 25, 98

Conread position: 8-238
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 17, 79

Conread position: 21-234
Cow position:
Alignm length: 217
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 8, 64

Conread position: 22-239
Cow position:
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 7, 64

Conread position: 24-238
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 71, 0

Conread position: 26-192
Cow position:
Alignm length: 168
Alignm identity: 134
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 17, 69

Conread position: 26-221
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 26-239
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 0

Conread position: 27-191
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 27-198
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 10, 58

Conread position: 27-203
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 167, 68

Conread position: 27-206
Cow position:
Alignm length: 180
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 27-210
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 27-214
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 27-218
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 55, 0

Conread position: 27-226
Cow position:
Alignm length: 200
Alignm identity: 156
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 57, 0

Conread position: 27-229
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 57, 193

Conread position: 27-236
Cow position:
Alignm length: 213
Alignm identity: 152
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 99

Conread position: 27-236
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 27-236
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 136, 57

Conread position: 27-237
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 27-237
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 64, 0

Conread position: 27-238
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 126, 55

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 57, 0

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 27-238
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 165, 57

Conread position: 27-238
Cow position:
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 57

Conread position: 27-238
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 27-239
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 61, 115

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 27-239
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 27-239
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 203, 51

Conread position: 27-239
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 47

Conread position: 28-231
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 28-235
Cow position:
Alignm length: 209
Alignm identity: 166
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 9, 57

Conread position: 28-238
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 28-238
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 49

Conread position: 28-238
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 49

Conread position: 28-238
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 28-239
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 77, 0

Conread position: 31-232
Cow position:
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 31-234
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 81

Conread position: 35-238
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 0

Conread position: 36-238
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 48, 0

Conread position: 37-198
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 37-238
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 38-236
Cow position:
Alignm length: 199
Alignm identity: 147
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.